CmoCh15G010340 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G010340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc finger family protein
LocationCmo_Chr15 : 6391434 .. 6393082 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCATAATGTTAATTTCCTCAAAATCACTCACATTAATATGATTTAGGACTACACTTCGTTTTTTTAATGGAAACCTAAAAAATTTGTGTGTATATATAGGTGTATATAGATTGGGTTGAACAAACTTAAATTTTCAAGTTGTTGAGTTGTGAACTCTATTCGGAACGAATTTTTAGTTTTTCAAAAAAATGAATCCAACCGAGGCGAAAACAAGTCTAACCCAATAGAGAGAAGATTGAAAAGGATAATAATAGTTGGAGTAACTTAAAAGGAAGGCAAAAACGAGGTGTGCACAGTGTTTGATTGTGAAGCAAAGTATTTAGCAGATTTGCACATAATAACCTAATAACCCTTAAGCCCTTCCTTTCATTTCTTCCCTTTAAAAGTCACGAGAGGCTTCCTCTTGTCTGTTTGTTGTTGTTTCAATTTTTTTGTAGAGAGAGGGAAGAGTGGCAGATGAACTGATAGAGAACTTTCAAAGCTCTTTTTCTTCACCACCCCATTACTCCAACTCCAACTCTCTCTCTCTCTCTCTTTCAAACCTCTGCTTCATCATGTAGGTGGTCTTCCCCACATAAACCAATTTCCCCCCTTCAGTTCTATCTTATTCATCTAACTCTTCTCTAATTTTTGTTGGTTTACAGGCGATCCCAACAGAGCCCTTTAGACCTCAACAACTTACCTGAAGATTATAATATCCGAGATGGCAAACAGATTAGTGAAGACACCTCTACTGGTAAATTCAACTATTTGTGGGCTTAAACAAACACAAACAACACAAAATTGAGTCAAATGTGTTGTTGCAGGTCATCGCAAGAACAAAAGTGGTATGAAGGAGGGCAAAGACGAGGCCGGAAAGGTGTATGAATGCAGGTTTTGCTCCCTCAAGTTCTGCAAATCCCAGGCCCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTTCACTACTTTTCCTTCTTTTATGGTTCTTTATCATTTCATTTCTTGACTTCATTTCTGTTTGGTTTTTGGTCAGAGAGAGAGACAGAGACACTCAATCGAGCTCGCCAGCTTGTTTTCACTAACGATAACCTGGCCGCCCAACCGCCTCCTCATTTAGGGTATTCTATTTATCTCACCCATTTGTATTGGCGAATTGAAAGTTTACACGTCCCCAATAAATTTCCTTTTTGTTTTCTTGTTTTGGGGTGATTAGGTGCTGTCATTCAATGGCACCGGGAGGAAGCTACCAGACGGGGGACAGCGGCGGCGTAGGGGGTGATTCAATGCTGCCACTCAGATTCCCAACCACTCTTCTGCCACCGCAGCCGGCATATCTATACAGCTCGCCGACACGGCCATCTGGGTTCCCCTCATACTATGCTCCTCCTCCTCCTCCTCCTCCTCCTCCACAACCACAAGCCTCCATCAACGAGTTCTTCGTGGGGCATGTCTTGGGGAACCCTTCCCATTGCACCCATCACACTGTTAACTACGGTTCCACCTCGGTAGAGTCGAGCAGCTACACTTGCATCGGTGCTCCGGTGGGGCATGCCATGGCGTTCAGAGGTAGTAGAGACGGATCACAGAAGAAGCAGCAGCAGCAGCAGCAGAGTTTGGACGTTCCTTCCTCGATCAATCGGTTTCAAGATGGGTTCTAA

mRNA sequence

ATGCCCATAATGCGATCCCAACAGAGCCCTTTAGACCTCAACAACTTACCTGAAGATTATAATATCCGAGATGGCAAACAGATTAGTGAAGACACCTCTACTGGTCATCGCAAGAACAAAAGTGGTATGAAGGAGGGCAAAGACGAGGCCGGAAAGGTGTATGAATGCAGGTTTTGCTCCCTCAAGTTCTGCAAATCCCAGGCCCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTTCACTACTTTTCCTTCTTTTATGGTTCTTTATCATTTCATTTCTTGACTTCATTTCTGTTTGGTTTTTGAGAGAGACAGAGACACTCAATCGAGCTCGCCAGCTTGTTTTCACTAACGATAACCTGGCCGCCCAACCGCCTCCTCATTTAGGGTGCTGTCATTCAATGGCACCGGGAGGAAGCTACCAGACGGGGGACAGCGGCGGCGTAGGGGGTGATTCAATGCTGCCACTCAGATTCCCAACCACTCTTCTGCCACCGCAGCCGGCATATCTATACAGCTCGCCGACACGGCCATCTGGGTTCCCCTCATACTATGCTCCTCCTCCTCCTCCTCCTCCTCCTCCACAACCACAAGCCTCCATCAACGAGTTCTTCGTGGGGCATGTCTTGGGGAACCCTTCCCATTGCACCCATCACACTGTTAACTACGGTTCCACCTCGGTAGAGTCGAGCAGCTACACTTGCATCGGTGCTCCGGTGGGGCATGCCATGGCGTTCAGAGGTAGTAGAGACGGATCACAGAAGAAGCAGCAGCAGCAGCAGCAGAGTTTGGACGTTCCTTCCTCGATCAATCGGTTTCAAGATGGGTTCTAA

Coding sequence (CDS)

ATGCCCATAATGCGATCCCAACAGAGCCCTTTAGACCTCAACAACTTACCTGAAGATTATAATATCCGAGATGGCAAACAGATTAGTGAAGACACCTCTACTGGTCATCGCAAGAACAAAAGTGGTATGAAGGAGGGCAAAGACGAGGCCGGAAAGGTGTATGAATGCAGGTTTTGCTCCCTCAAGTTCTGCAAATCCCAGGCCCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTTCACTACTTTTCCTTCTTTTATGGTTCTTTATCATTTCATTTCTTGACTTCATTTCTGTTTGGTTTTTGAGAGAGACAGAGACACTCAATCGAGCTCGCCAGCTTGTTTTCACTAACGATAACCTGGCCGCCCAACCGCCTCCTCATTTAGGGTGCTGTCATTCAATGGCACCGGGAGGAAGCTACCAGACGGGGGACAGCGGCGGCGTAGGGGGTGATTCAATGCTGCCACTCAGATTCCCAACCACTCTTCTGCCACCGCAGCCGGCATATCTATACAGCTCGCCGACACGGCCATCTGGGTTCCCCTCATACTATGCTCCTCCTCCTCCTCCTCCTCCTCCTCCACAACCACAAGCCTCCATCAACGAGTTCTTCGTGGGGCATGTCTTGGGGAACCCTTCCCATTGCACCCATCACACTGTTAACTACGGTTCCACCTCGGTAGAGTCGAGCAGCTACACTTGCATCGGTGCTCCGGTGGGGCATGCCATGGCGTTCAGAGGTAGTAGAGACGGATCACAGAAGAAGCAGCAGCAGCAGCAGCAGAGTTTGGACGTTCCTTCCTCGATCAATCGGTTTCAAGATGGGTTCTAA
Homology
[Close]
BLAST of CmoCh15G010340 vs. Swiss-Prot
Match: JAG_ARATH (Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-34
Identity = 115/305 (37.70%), Postives = 149/305 (48.85%), Query Frame = 1 

Query: 4   MRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKF 63
           MR +++ LDLNNLP+D++    KQ  E+ S+  ++ K G KEGKDE+GKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 64  CKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNL 123
           CKSQALGGHMNRHRQ                          RETETLN+ARQLV+ ND +
Sbjct: 61  CKSQALGGHMNRHRQE-------------------------RETETLNQARQLVYRNDTI 120

Query: 124 AAQPPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFP---TTLLPPQPAYLYSSPTRP 183
               PP       ++P G + T D          P+ +P   +T L PQ           
Sbjct: 121 T---PP------GISPFGYHHTTDPTIYRSVYSSPMIYPGSSSTNLVPQ----------- 180

Query: 184 SGFPSYYAPPPPPPPPPQPQAS--------INEFFVG-------HVLGNPSHCTHHTVNY 243
                   PP PPPPPP P +S         N++++         +  +P+  T  TV+Y
Sbjct: 181 --------PPMPPPPPPYPYSSNQYSPHNHFNDYYLNPSFRGSRSISPSPNLPTTTTVDY 240

Query: 244 GSTSVESSSYTCIGAPVG-HAMAFRG------------SRDGSQKKQQQQQQSLDVPSSI 278
            + S     YTC+GAP+G      RG             RDG   + Q+   SL  P  I
Sbjct: 241 MADSPVEPGYTCVGAPIGPTGFPIRGPSIVRAPLEPPQGRDGDASR-QRLDHSLRFP--I 249

[Close]
BLAST of CmoCh15G010340 vs. Swiss-Prot
Match: SL1_ORYSJ (Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33
Identity = 110/267 (41.20%), Postives = 134/267 (50.19%), Query Frame = 1 

Query: 5   RSQQSPLDLNNLPEDYNIRDGKQISEDTST-------GHRKNKSGMKEGKDEAGKVYECR 64
           R + SPLDLNNLP+++    GKQ  E ++T         R  K     GKDEAGKVYECR
Sbjct: 6   RQEGSPLDLNNLPDEF----GKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECR 65

Query: 65  FCSLKFCKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLV 124
           FCSLKFCKSQALGGHMNRHRQ                          RETETLNRARQLV
Sbjct: 66  FCSLKFCKSQALGGHMNRHRQE-------------------------RETETLNRARQLV 125

Query: 125 FTNDNLAAQPPP------HLGCCHSMAPGGSYQTGD----SGGVGGDSMLPLR-FPTTLL 184
           F ND+LAA          ++G   + AP  + Q G      GGVGGD  +PLR     L 
Sbjct: 126 FGNDSLAAVGAQLNFRDVNMGGGGAAAPPPTMQMGGGGFRGGGVGGDPCIPLRPVQPRLS 185

Query: 185 PPQPA----YLYSSPTRPSGF-PSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHH 243
           PPQP     YLY++   PS   P  Y    P PP  Q  A++ ++ +G           H
Sbjct: 186 PPQPPPYHHYLYTTTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIG-----------H 232

[Close]
BLAST of CmoCh15G010340 vs. Swiss-Prot
Match: JGL_ARATH (Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.8e-20
Identity = 87/247 (35.22%), Postives = 110/247 (44.53%), Query Frame = 1 

Query: 7   QQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKFCKS 66
           + + LDLNNLP+D + RD     E+  +    +  G +E + + GK YECRFCSLKF KS
Sbjct: 5   ENNTLDLNNLPDDPS-RDIFPFFEEGFSSS-SSSGGFREKQTKDGKEYECRFCSLKFFKS 64

Query: 67  QALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNLAAQ 126
           QALGGHMNRHRQ                          RETE+LN+AR+LV  ND+    
Sbjct: 65  QALGGHMNRHRQE-------------------------RETESLNKARELVLRNDSF--- 124

Query: 127 PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFP---------TTLLPPQPAYLYSSP 186
            PPH G      P  SY  GD          P+ +P         +++L  QP YLY   
Sbjct: 125 -PPHQG-----PPSFSYHQGDVHIGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLY--- 184

Query: 187 TRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHTVNYGSTSVESSSYTC 245
                       PP   P PQ   +I      H     S C       G  ++  SSYT 
Sbjct: 185 ------------PPLSSPFPQHNTNIGNNGTRHQTLTNSVC-------GGRALPDSSYTF 193

[Close]
BLAST of CmoCh15G010340 vs. TrEMBL
Match: A0A0A0KTC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G372190 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 195/301 (64.78%), Postives = 210/301 (69.77%), Query Frame = 1 

Query: 1   MPIMRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCS 60
           M   RS+ SPLDLNNLPEDY IRDGKQI ED+S+GHRK KSG+KEGK+E+GKVYECRFCS
Sbjct: 1   MVCRRSEGSPLDLNNLPEDY-IRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCS 60

Query: 61  LKFCKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTN 120
           LKFCKSQALGGHMNRHRQ                          RETETLNRARQLVF+N
Sbjct: 61  LKFCKSQALGGHMNRHRQE-------------------------RETETLNRARQLVFSN 120

Query: 121 DNLAAQ-PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFPT---------TLLPPQP 180
           DNLAAQ PPPHLGCCHSMAP   +  G SG VG DS LPLRFPT         TLLP  P
Sbjct: 121 DNLAAQPPPPHLGCCHSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPP 180

Query: 181 ---------AYLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHH 240
                     YLY+SPTRPS FPSYY         P PQASIN+++VGHVLGNPS C+H 
Sbjct: 181 PPPLPSSHQPYLYNSPTRPSSFPSYY---------PPPQASINDYYVGHVLGNPSQCSHQ 240

Query: 241 TVNYGSTSVESSSYTCIGAPVGHAMAFRGSRDG---SQKKQQQQQQSLDVPSSINRFQDG 280
           TVNYGS+SVESSSYTCIGAPVGHA    G RDG     +   QQQQ LDVPSSINRFQDG
Sbjct: 241 TVNYGSSSVESSSYTCIGAPVGHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDG 266

[Close]
BLAST of CmoCh15G010340 vs. TrEMBL
Match: M5XJF7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022855mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.2e-65
Identity = 155/317 (48.90%), Postives = 185/317 (58.36%), Query Frame = 1 

Query: 9   SPLDLNNLPEDYNIRDGKQISEDTST--GHRKNKSGMKEGKDEAGKVYECRFCSLKFCKS 68
           +PLDLNNLP+D+  RDGKQ+ ED+ +  G+RK KSG K+GKDE GKVYECRFCSLKFCKS
Sbjct: 11  NPLDLNNLPDDHFSRDGKQVVEDSFSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFCKS 70

Query: 69  QALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNLAAQ 128
           QALGGHMNRHRQGK                         ETETLN+ARQLVF+NDNLAA 
Sbjct: 71  QALGGHMNRHRQGK-------------------------ETETLNKARQLVFSNDNLAAP 130

Query: 129 PPPHLGCCHSMAPGGSYQTGDSGG-VGGDSMLPLRFP---------TTLLPPQPA----- 188
           PPPHLGCCH + P G +    +G  +GGD  LPLRFP         +TL+PP P      
Sbjct: 131 PPPHLGCCHPITPAGYHHPAAAGNNIGGDPTLPLRFPARMFSGSSSSTLVPPPPPPAVPQ 190

Query: 189 ---------YLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCT--- 248
                    YLYSSP+RP    S+Y         P  Q S+N+++VGHVL + S  +   
Sbjct: 191 PGVQPPQQPYLYSSPSRPMFPASHY---------PHHQHSVNDYYVGHVLSSTSSSSPSQ 250

Query: 249 ----HHTVNYGSTSVESSSYTCIGAPV--GHAMAFRGSRDGSQKKQQQQ----------- 280
               H  VNYG++  E ++YTCIGAPV  G      G RDGS    Q++           
Sbjct: 251 YGHGHPNVNYGASPPEPANYTCIGAPVGPGGGGGGGGGRDGSLHMNQEEGLNWSRSYAGT 293

[Close]
BLAST of CmoCh15G010340 vs. TrEMBL
Match: F6HEW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03600 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.7e-57
Identity = 157/332 (47.29%), Postives = 187/332 (56.33%), Query Frame = 1 

Query: 4   MRSQQSPLDLNNLPEDYNIRDGKQISEDTST---------GHRKNKSGMKEGKDEAGKVY 63
           MR +++PLDLNNLPED+  RDGKQ+ ED+S+         G RK KSG K+GKDE GKVY
Sbjct: 65  MRPERNPLDLNNLPEDFT-RDGKQVFEDSSSSVALIGFVAGCRKKKSGGKDGKDECGKVY 124

Query: 64  ECRFCSLKFCKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRAR 123
           ECRFCSLKFCKSQALGGHMNRHRQGK                         ETETLNRAR
Sbjct: 125 ECRFCSLKFCKSQALGGHMNRHRQGK-------------------------ETETLNRAR 184

Query: 124 QLVFTNDNLAAQPPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLR--FPT--------T 183
           Q+VF+N+NLAAQ  PHLG    +APG  +QTG+     GD  LP R  +PT        T
Sbjct: 185 QIVFSNENLAAQGVPHLG-GQPIAPGSFHQTGNM----GDPTLPFRSVYPTRMFSGSSST 244

Query: 184 LL--PPQPAYLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHT 243
           LL  PPQP YLY+SP+R   +PS Y PP           S+N+++VGHVL + S  +H  
Sbjct: 245 LLTPPPQP-YLYASPSRLVSYPSQYPPP-----------SMNDYYVGHVLSSGSQYSHPG 304

Query: 244 VNYGSTSVESSSYTCIGAPVGHAM-------------------------AFRGSRDGSQK 280
           +NYG  S   S+YTCIGAPVGH                              G RDGS +
Sbjct: 305 LNYGGAS--DSNYTCIGAPVGHGFPPSNGGGRGSELGGSGGGGGGGGGGGGGGGRDGSLQ 350

[Close]
BLAST of CmoCh15G010340 vs. TrEMBL
Match: W9RUU4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014642 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.8e-56
Identity = 141/272 (51.84%), Postives = 170/272 (62.50%), Query Frame = 1 

Query: 5   RSQQSPLDLNNLPEDYNIRDGKQ-ISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKF 64
           R + +PLDLNNLP+D++ RDGKQ + ED STG+RK KSG KEGKD+ GKVYECRFCSLKF
Sbjct: 5   RPEGNPLDLNNLPDDFS-RDGKQQLLEDASTGYRKKKSGGKEGKDDCGKVYECRFCSLKF 64

Query: 65  CKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNL 124
           CKSQALGGHMNRHRQG             +SF  F    F RETETLNRARQLVF+NDNL
Sbjct: 65  CKSQALGGHMNRHRQG-------------MSFQYF----FKRETETLNRARQLVFSNDNL 124

Query: 125 AAQPPPHLGCCHSMAPGGSYQTGDS-GGVGGDSMLPLRFPTTLL-------------PPQ 184
           AAQ   HL CCH + P GSY      G +G D+ LPLRFPT +              PP 
Sbjct: 125 AAQS--HLSCCHPITPPGSYHHHPPPGNIGPDTTLPLRFPTRMFSNSSSSFISPPPPPPL 184

Query: 185 PA--------YLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINE-FFVGHVLGNPSHCT- 244
           P+        YLY+SPTRP  F S+Y        P    A++N+ ++VGHVL + +  T 
Sbjct: 185 PSQAVQPSQPYLYTSPTRPLSFSSHY--------PAHQHAAVNDNYYVGHVLSSNTSSTS 244

Query: 245 ---HHTVNYGSTSVESSSYTCIGAPVGHAMAF 249
              H  ++Y + +   S+YTCIGAPVGHA  F
Sbjct: 245 QYCHPNISYAAAA--ESNYTCIGAPVGHAHGF 246

[Close]
BLAST of CmoCh15G010340 vs. TrEMBL
Match: V7BDD0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G027700g PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.3e-56
Identity = 146/298 (48.99%), Postives = 174/298 (58.39%), Query Frame = 1 

Query: 5   RSQQSPLDLNNLPEDYNIRDGKQISED--TSTGHRKNKSGMKEGKDEAGKVYECRFCSLK 64
           R + +PLDLNNLP++Y+ RDGKQ+ ED  +STG RK KSG K+GKDE GKVYECRFCSLK
Sbjct: 24  RPEGNPLDLNNLPDEYS-RDGKQVLEDHTSSTGCRKKKSGGKDGKDECGKVYECRFCSLK 83

Query: 65  FCKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTND- 124
           FCKSQALGGHMNRHRQ                          RETETLN+ARQLVF +D 
Sbjct: 84  FCKSQALGGHMNRHRQE-------------------------RETETLNQARQLVFRSDH 143

Query: 125 NLAAQPPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFP--------TTLLPPQPA-- 184
           +LAAQ PPHLGCC  +  GG + T       GD   PLRFP        T + P  PA  
Sbjct: 144 SLAAQAPPHLGCCQPIGSGGYHPT-------GDPTAPLRFPRYFSGSSSTHMPPAAPAPV 203

Query: 185 ----YLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHTVNYGS 244
               YLY+SPTRP  F S + P          Q ++N+++VGHV+   SH  H+    G 
Sbjct: 204 APQPYLYTSPTRPVSFGSSHFP---------HQHAVNDYYVGHVMSG-SH-GHYVGGGGG 263

Query: 245 TSVESSSYTCIGAPVGHAMAFRGSRDGSQKKQQQQQQS------LDVPSSINRFQDGF 280
               +SSYTCIGAPVG        +DGS    Q++  S      LD PS+INRFQDGF
Sbjct: 264 GGESTSSYTCIGAPVGQGGGAPAVKDGSLHNNQEEGLSWGRGYRLDPPSAINRFQDGF 277

[Close]
BLAST of CmoCh15G010340 vs. TAIR10
Match: AT1G68480.1 (AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 115/305 (37.70%), Postives = 149/305 (48.85%), Query Frame = 1 

Query: 4   MRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKF 63
           MR +++ LDLNNLP+D++    KQ  E+ S+  ++ K G KEGKDE+GKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 64  CKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNL 123
           CKSQALGGHMNRHRQ                          RETETLN+ARQLV+ ND +
Sbjct: 61  CKSQALGGHMNRHRQE-------------------------RETETLNQARQLVYRNDTI 120

Query: 124 AAQPPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFP---TTLLPPQPAYLYSSPTRP 183
               PP       ++P G + T D          P+ +P   +T L PQ           
Sbjct: 121 T---PP------GISPFGYHHTTDPTIYRSVYSSPMIYPGSSSTNLVPQ----------- 180

Query: 184 SGFPSYYAPPPPPPPPPQPQAS--------INEFFVG-------HVLGNPSHCTHHTVNY 243
                   PP PPPPPP P +S         N++++         +  +P+  T  TV+Y
Sbjct: 181 --------PPMPPPPPPYPYSSNQYSPHNHFNDYYLNPSFRGSRSISPSPNLPTTTTVDY 240

Query: 244 GSTSVESSSYTCIGAPVG-HAMAFRG------------SRDGSQKKQQQQQQSLDVPSSI 278
            + S     YTC+GAP+G      RG             RDG   + Q+   SL  P  I
Sbjct: 241 MADSPVEPGYTCVGAPIGPTGFPIRGPSIVRAPLEPPQGRDGDASR-QRLDHSLRFP--I 249

[Close]
BLAST of CmoCh15G010340 vs. TAIR10
Match: AT1G13400.1 (AT1G13400.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 4.9e-21
Identity = 87/247 (35.22%), Postives = 110/247 (44.53%), Query Frame = 1 

Query: 7   QQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKFCKS 66
           + + LDLNNLP+D + RD     E+  +    +  G +E + + GK YECRFCSLKF KS
Sbjct: 5   ENNTLDLNNLPDDPS-RDIFPFFEEGFSSS-SSSGGFREKQTKDGKEYECRFCSLKFFKS 64

Query: 67  QALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNLAAQ 126
           QALGGHMNRHRQ                          RETE+LN+AR+LV  ND+    
Sbjct: 65  QALGGHMNRHRQE-------------------------RETESLNKARELVLRNDSF--- 124

Query: 127 PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFP---------TTLLPPQPAYLYSSP 186
            PPH G      P  SY  GD          P+ +P         +++L  QP YLY   
Sbjct: 125 -PPHQG-----PPSFSYHQGDVHIGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLY--- 184

Query: 187 TRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHTVNYGSTSVESSSYTC 245
                       PP   P PQ   +I      H     S C       G  ++  SSYT 
Sbjct: 185 ------------PPLSSPFPQHNTNIGNNGTRHQTLTNSVC-------GGRALPDSSYTF 193

[Close]
BLAST of CmoCh15G010340 vs. NCBI nr
Match: gi|778702278|ref|XP_011655169.1| (PREDICTED: zinc finger protein JAGGED [Cucumis sativus])

HSP 1 Score: 352.8 bits (904), Expect = 5.4e-94
Identity = 195/298 (65.44%), Postives = 210/298 (70.47%), Query Frame = 1 

Query: 4   MRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKF 63
           MRS+ SPLDLNNLPEDY IRDGKQI ED+S+GHRK KSG+KEGK+E+GKVYECRFCSLKF
Sbjct: 1   MRSEGSPLDLNNLPEDY-IRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKF 60

Query: 64  CKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNL 123
           CKSQALGGHMNRHRQ                          RETETLNRARQLVF+NDNL
Sbjct: 61  CKSQALGGHMNRHRQE-------------------------RETETLNRARQLVFSNDNL 120

Query: 124 AAQ-PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFPT---------TLLPPQP--- 183
           AAQ PPPHLGCCHSMAP   +  G SG VG DS LPLRFPT         TLLP  P   
Sbjct: 121 AAQPPPPHLGCCHSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPP 180

Query: 184 ------AYLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHTVN 243
                  YLY+SPTRPS FPSYY         P PQASIN+++VGHVLGNPS C+H TVN
Sbjct: 181 LPSSHQPYLYNSPTRPSSFPSYY---------PPPQASINDYYVGHVLGNPSQCSHQTVN 240

Query: 244 YGSTSVESSSYTCIGAPVGHAMAFRGSRDG---SQKKQQQQQQSLDVPSSINRFQDGF 280
           YGS+SVESSSYTCIGAPVGHA    G RDG     +   QQQQ LDVPSSINRFQDGF
Sbjct: 241 YGSSSVESSSYTCIGAPVGHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 263

[Close]
BLAST of CmoCh15G010340 vs. NCBI nr
Match: gi|659131633|ref|XP_008465782.1| (PREDICTED: zinc finger protein JAGGED [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 1.2e-93
Identity = 195/299 (65.22%), Postives = 210/299 (70.23%), Query Frame = 1 

Query: 4   MRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCSLKF 63
           MRS+ SPLDLNNLPEDY IRDGKQI ED+S+GHRK KSG+KEGK+E+GKVYECRFCSLKF
Sbjct: 1   MRSEGSPLDLNNLPEDY-IRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKF 60

Query: 64  CKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNL 123
           CKSQALGGHMNRHRQ                          RETETLNRARQLVF+NDNL
Sbjct: 61  CKSQALGGHMNRHRQE-------------------------RETETLNRARQLVFSNDNL 120

Query: 124 AAQ--PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFPT---------TLLPPQP-- 183
           AAQ  PPPHLGCCHSMAP   +  G SG VG DS LPLRFPT         TLLP  P  
Sbjct: 121 AAQPPPPPHLGCCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPP 180

Query: 184 -------AYLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHHTV 243
                   YLY+SPTRPS FPSYY         P PQASIN+++VGHVLGNPS C+H TV
Sbjct: 181 PLPSSHQPYLYNSPTRPSSFPSYY---------PPPQASINDYYVGHVLGNPSQCSHQTV 240

Query: 244 NYGSTSVESSSYTCIGAPVGHAMAFRGSRDG---SQKKQQQQQQSLDVPSSINRFQDGF 280
           NYGS+ VESSSYTCIGAPVGHA A  G RDG     +   QQQQ LDVPSSINRFQDGF
Sbjct: 241 NYGSSPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 264

[Close]
BLAST of CmoCh15G010340 vs. NCBI nr
Match: gi|700195779|gb|KGN50956.1| (hypothetical protein Csa_5G372190 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.6e-93
Identity = 195/301 (64.78%), Postives = 210/301 (69.77%), Query Frame = 1 

Query: 1   MPIMRSQQSPLDLNNLPEDYNIRDGKQISEDTSTGHRKNKSGMKEGKDEAGKVYECRFCS 60
           M   RS+ SPLDLNNLPEDY IRDGKQI ED+S+GHRK KSG+KEGK+E+GKVYECRFCS
Sbjct: 1   MVCRRSEGSPLDLNNLPEDY-IRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCS 60

Query: 61  LKFCKSQALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTN 120
           LKFCKSQALGGHMNRHRQ                          RETETLNRARQLVF+N
Sbjct: 61  LKFCKSQALGGHMNRHRQE-------------------------RETETLNRARQLVFSN 120

Query: 121 DNLAAQ-PPPHLGCCHSMAPGGSYQTGDSGGVGGDSMLPLRFPT---------TLLPPQP 180
           DNLAAQ PPPHLGCCHSMAP   +  G SG VG DS LPLRFPT         TLLP  P
Sbjct: 121 DNLAAQPPPPHLGCCHSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPP 180

Query: 181 ---------AYLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCTHH 240
                     YLY+SPTRPS FPSYY         P PQASIN+++VGHVLGNPS C+H 
Sbjct: 181 PPPLPSSHQPYLYNSPTRPSSFPSYY---------PPPQASINDYYVGHVLGNPSQCSHQ 240

Query: 241 TVNYGSTSVESSSYTCIGAPVGHAMAFRGSRDG---SQKKQQQQQQSLDVPSSINRFQDG 280
           TVNYGS+SVESSSYTCIGAPVGHA    G RDG     +   QQQQ LDVPSSINRFQDG
Sbjct: 241 TVNYGSSSVESSSYTCIGAPVGHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDG 266

[Close]
BLAST of CmoCh15G010340 vs. NCBI nr
Match: gi|596258237|ref|XP_007224850.1| (hypothetical protein PRUPE_ppa022855mg [Prunus persica])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 155/317 (48.90%), Postives = 185/317 (58.36%), Query Frame = 1 

Query: 9   SPLDLNNLPEDYNIRDGKQISEDTST--GHRKNKSGMKEGKDEAGKVYECRFCSLKFCKS 68
           +PLDLNNLP+D+  RDGKQ+ ED+ +  G+RK KSG K+GKDE GKVYECRFCSLKFCKS
Sbjct: 11  NPLDLNNLPDDHFSRDGKQVVEDSFSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFCKS 70

Query: 69  QALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNLAAQ 128
           QALGGHMNRHRQGK                         ETETLN+ARQLVF+NDNLAA 
Sbjct: 71  QALGGHMNRHRQGK-------------------------ETETLNKARQLVFSNDNLAAP 130

Query: 129 PPPHLGCCHSMAPGGSYQTGDSGG-VGGDSMLPLRFP---------TTLLPPQPA----- 188
           PPPHLGCCH + P G +    +G  +GGD  LPLRFP         +TL+PP P      
Sbjct: 131 PPPHLGCCHPITPAGYHHPAAAGNNIGGDPTLPLRFPARMFSGSSSSTLVPPPPPPAVPQ 190

Query: 189 ---------YLYSSPTRPSGFPSYYAPPPPPPPPPQPQASINEFFVGHVLGNPSHCT--- 248
                    YLYSSP+RP    S+Y         P  Q S+N+++VGHVL + S  +   
Sbjct: 191 PGVQPPQQPYLYSSPSRPMFPASHY---------PHHQHSVNDYYVGHVLSSTSSSSPSQ 250

Query: 249 ----HHTVNYGSTSVESSSYTCIGAPV--GHAMAFRGSRDGSQKKQQQQ----------- 280
               H  VNYG++  E ++YTCIGAPV  G      G RDGS    Q++           
Sbjct: 251 YGHGHPNVNYGASPPEPANYTCIGAPVGPGGGGGGGGGRDGSLHMNQEEGLNWSRSYAGT 293

[Close]
BLAST of CmoCh15G010340 vs. NCBI nr
Match: gi|645276701|ref|XP_008243413.1| (PREDICTED: zinc finger protein JAGGED [Prunus mume])

HSP 1 Score: 230.7 bits (587), Expect = 3.1e-57
Identity = 147/315 (46.67%), Postives = 176/315 (55.87%), Query Frame = 1 

Query: 9   SPLDLNNLPEDYNIRDGKQISEDTST--GHRKNKSGMKEGKDEAGKVYECRFCSLKFCKS 68
           +PLDLNNLP+D+  RDGKQ+ ED+S+  G+RK KSG K+GKDE GKVYECRFCSLKFCKS
Sbjct: 29  NPLDLNNLPDDHFSRDGKQVVEDSSSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFCKS 88

Query: 69  QALGGHMNRHRQGKISLLFLLLWFFIISFLDFISVWFLRETETLNRARQLVFTNDNLAA- 128
           QALGGHMNRHRQ                          RETETLN+ARQLVF+NDNLAA 
Sbjct: 89  QALGGHMNRHRQE-------------------------RETETLNKARQLVFSNDNLAAP 148

Query: 129 QPPPHLGCCHSMAPGGSYQTGDSG-GVGGDSMLPLRFPTTLLPPQPAYLYSSPTRPSGFP 188
            PPPHLGCCH + P G +    +G  +GGD  L LRFP  +     +     P  P G P
Sbjct: 149 PPPPHLGCCHPITPAGYHHPAAAGNNIGGDPTLTLRFPARMFSGSSSSALVPPPPPPGVP 208

Query: 189 SYYAPPPPPP----PPPQP-----------QASINEFFVGHVLGNPSHCT--------HH 248
                PP  P     P +P           Q S+N+++VGHVL + S  +        H 
Sbjct: 209 QPGVQPPQQPYLYSSPSRPMSFPASHYPHHQHSVNDYYVGHVLSSTSSSSSPSQYGHGHP 268

Query: 249 TVNYGSTSVESSSYTCIGAPV------GHAMAFRGSRDGSQKKQQQQ-----------QQ 280
            VNYG++  E ++YTCIGAPV      G      G RDGS    Q++           QQ
Sbjct: 269 NVNYGASPPEPANYTCIGAPVGPGGGGGGGGGGGGGRDGSLHMNQEEGLNWSRSYAGTQQ 318

The following BLAST results are available for this feature:
BLAST of CmoCh15G010340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JAG_ARATH2.2e-3437.70Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1[more]
SL1_ORYSJ2.4e-3341.20Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=... [more]
JGL_ARATH8.8e-2035.22Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1[more]
BLAST of CmoCh15G010340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTC2_CUCSA1.1e-9364.78Uncharacterized protein OS=Cucumis sativus GN=Csa_5G372190 PE=4 SV=1[more]
M5XJF7_PRUPE8.2e-6548.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022855mg PE=4 SV=1[more]
F6HEW5_VITVI3.7e-5747.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03600 PE=4 SV=... [more]
W9RUU4_9ROSA1.8e-5651.84Uncharacterized protein OS=Morus notabilis GN=L484_014642 PE=4 SV=1[more]
V7BDD0_PHAVU5.3e-5648.99Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G027700g PE=4 SV=1[more]
BLAST of CmoCh15G010340 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68480.11.2e-3537.70 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G13400.14.9e-2135.22 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmoCh15G010340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702278|ref|XP_011655169.1|5.4e-9465.44PREDICTED: zinc finger protein JAGGED [Cucumis sativus][more]
gi|659131633|ref|XP_008465782.1|1.2e-9365.22PREDICTED: zinc finger protein JAGGED [Cucumis melo][more]
gi|700195779|gb|KGN50956.1|1.6e-9364.78hypothetical protein Csa_5G372190 [Cucumis sativus][more]
gi|596258237|ref|XP_007224850.1|1.2e-6448.90hypothetical protein PRUPE_ppa022855mg [Prunus persica][more]
gi|645276701|ref|XP_008243413.1|3.1e-5746.67PREDICTED: zinc finger protein JAGGED [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G010340.1CmoCh15G010340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..76
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 54..81
score: 8
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 104..180
score: 7.7E-44coord: 5..78
score: 7.7
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 51..80
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G010340CmaCh04G020430Cucurbita maxima (Rimu)cmacmoB698
CmoCh15G010340MELO3C003021Melon (DHL92) v3.5.1cmomeB251
CmoCh15G010340ClCG03G009600Watermelon (Charleston Gray)cmowcgB249
CmoCh15G010340Lsi09G010330Bottle gourd (USVL1VR-Ls)cmolsiB257
CmoCh15G010340Cp4.1LG01g17840Cucurbita pepo (Zucchini)cmocpeB286
CmoCh15G010340MELO3C003021.2Melon (DHL92) v3.6.1cmomedB284
CmoCh15G010340Cla97C03G060680Watermelon (97103) v2cmowmbB282
CmoCh15G010340Carg27852Silver-seed gourdcarcmoB0895
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G010340CmoCh04G021420Cucurbita moschata (Rifu)cmocmoB270
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G010340Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G010340Cucurbita pepo (Zucchini)cmocpeB268