CmoCh04G021420 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G021420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc finger family protein
LocationCmo_Chr04 : 14750424 .. 14751839 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTAGGTCTTCCCCCACAACAAACCTCTCTCCTTTTCCCTCTCCATCTCTCTAATTCATATCCTGTTTTGTTGGTTTGCAGGAGATCCCAAGGCAGCCCTTTAGACCTCAACAACTTACCAGAAGATTATATCAGAGATCGCAAACAGATTATCGAAGATACCTCTACTGGTAACATAAACCCTATTCCCCACTTTCCTTTTTCCTTTTGTTTGGTGCCAAAAAAAGGACCACTTTAACCAACTTCCGCTCCTCTCTCTTTAGCCCAATGATTTGGGATTCTTAACTCCTTTCATGCAAATTAAAAGAACCCCTTTTCAACACACTCAATGGGTCTCTTATTTTCAATTGACAATGAAAAGATTTGAAGAGAAATTGTAAGGTTTTGCAGGTCATCGGAAAAAGAAAAGTGGAGGGAAGGAGGGAAATGAGGAGTCCGGAAAGGTGTATGAATGCAGGTTTTGTTCCCTCAAGTTCTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAACTCACTTTTCTTTTCTTTTTGGCTTTTGTTTTTGTTAATGATGTGAAAAGAGAGACATGAGAAAAGGAGGGATTTTTGGGTGAATTATTAGTTGCAGGTTTGTTTGTGTATGATTTGATTTTTGACTCCATTTGTGTTTGGTTTTTGGTCAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAATCTGGCTGTCCAATCTCCTCCTCCTCATTTAGGGTATTCCATTCATCTCAAATGTATTACCATTAACCTATATTTTTAAAATTACAAAAATTACAACATTTTCATATATATAATTACAATACTTAATATTTTAGTTTTCAGCTGATTTCCCTTCAAAGTATATATATATTTTAAATAAATTTTGTGTTTTTTTAACATTTTAGGTGCTGCCACTCAATGACACCGGGGAGCTACCACACAGCTGGCAGCGGCGGCGTAGGAAGTGATCCAACGTTGTCTCTCAGATTCCCAACAAGAATGTTCCCAGGCTCTTCCCCAACTACCCTTCTGCCGCCGACCCCATCACCACCGCCTCCTCCGCCACCTCACCAGCCATATCTATACAGCTCCCCCTCGCGGCCATCCAGTTTCCCTTCATACTATCCTCCACCGCAAGCCTCCATCAACGACTACTATGTGGGTCACGTCTTAGGGAACCCCGCACAATGCAGCCACCAGACCATGAACTACGGGTCGACGAGAAGCTCCATGGAGTCGAGTAGCTACACTTGCATCGGAGCTCCGGTGGGTCCAGCAGCGACGTTCGGCGGACGGGAGAGCGGTAGCGGAAGAGACGGATCACAGCAGCAGCGTTTGGACGTTCCCTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA

mRNA sequence

ATGATGAGATCCCAAGGCAGCCCTTTAGACCTCAACAACTTACCAGAAGATTATATCAGAGATCGCAAACAGATTATCGAAGATACCTCTACTGGTCATCGGAAAAAGAAAAGTGGAGGGAAGGAGGGAAATGAGGAGTCCGGAAAGGTGTATGAATGCAGGTTTTGTTCCCTCAAGTTCTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAACTCACTTTTCTTTTCTTTTTGGCTTTTGTTTTTGTTAATGATAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAATCTGGCTGTCCAATCTCCTCCTCCTCATTTAGGGTGCTGCCACTCAATGACACCGGGGAGCTACCACACAGCTGGCAGCGGCGGCGTAGGAAGTGATCCAACGTTGTCTCTCAGATTCCCAACAAGAATGTTCCCAGGCTCTTCCCCAACTACCCTTCTGCCGCCGACCCCATCACCACCGCCTCCTCCGCCACCTCACCAGCCATATCTATACAGCTCCCCCTCGCGGCCATCCAGTTTCCCTTCATACTATCCTCCACCGCAAGCCTCCATCAACGACTACTATGTGGGTCACGTCTTAGGGAACCCCGCACAATGCAGCCACCAGACCATGAACTACGGGTCGACGAGAAGCTCCATGGAGTCGAGTAGCTACACTTGCATCGGAGCTCCGGTGGGTCCAGCAGCGACGTTCGGCGGACGGGAGAGCGGTAGCGGAAGAGACGGATCACAGCAGCAGCGTTTGGACGTTCCCTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA

Coding sequence (CDS)

ATGATGAGATCCCAAGGCAGCCCTTTAGACCTCAACAACTTACCAGAAGATTATATCAGAGATCGCAAACAGATTATCGAAGATACCTCTACTGGTCATCGGAAAAAGAAAAGTGGAGGGAAGGAGGGAAATGAGGAGTCCGGAAAGGTGTATGAATGCAGGTTTTGTTCCCTCAAGTTCTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAACTCACTTTTCTTTTCTTTTTGGCTTTTGTTTTTGTTAATGATAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAATCTGGCTGTCCAATCTCCTCCTCCTCATTTAGGGTGCTGCCACTCAATGACACCGGGGAGCTACCACACAGCTGGCAGCGGCGGCGTAGGAAGTGATCCAACGTTGTCTCTCAGATTCCCAACAAGAATGTTCCCAGGCTCTTCCCCAACTACCCTTCTGCCGCCGACCCCATCACCACCGCCTCCTCCGCCACCTCACCAGCCATATCTATACAGCTCCCCCTCGCGGCCATCCAGTTTCCCTTCATACTATCCTCCACCGCAAGCCTCCATCAACGACTACTATGTGGGTCACGTCTTAGGGAACCCCGCACAATGCAGCCACCAGACCATGAACTACGGGTCGACGAGAAGCTCCATGGAGTCGAGTAGCTACACTTGCATCGGAGCTCCGGTGGGTCCAGCAGCGACGTTCGGCGGACGGGAGAGCGGTAGCGGAAGAGACGGATCACAGCAGCAGCGTTTGGACGTTCCCTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA
Homology
[Close]
BLAST of CmoCh04G021420 vs. Swiss-Prot
Match: JAG_ARATH (Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.6e-40
Identity = 122/288 (42.36%), Postives = 158/288 (54.86%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKF 61
           MR + + LDLNNLP+D+ +D  KQ +E+ S+  ++KK G KEG +ESGKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 62  CKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLG 121
           CKSQALGGHMNRHRQ               +RETETLN+ARQLV+ ND +   +PP    
Sbjct: 61  CKSQALGGHMNRHRQ---------------ERETETLNQARQLVYRNDTI---TPP---- 120

Query: 122 CCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPY 181
               ++P  YH        +DPT+  S+     ++PGSS T L+P  P PPPPPP   PY
Sbjct: 121 ---GISPFGYHHT------TDPTIYRSVYSSPMIYPGSSSTNLVPQPPMPPPPPP--YPY 180

Query: 182 LYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIG 241
             +  S  + F  YY      +N  + G    +P+     T        S     YTC+G
Sbjct: 181 SSNQYSPHNHFNDYY------LNPSFRGSRSISPSPNLPTTTTVDYMADSPVEPGYTCVG 240

Query: 242 APV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD 276
           AP+        GP+      E   GRDG + +QRLD  +   INRFQD
Sbjct: 241 APIGPTGFPIRGPSIVRAPLEPPQGRDGDASRQRLDHSLRFPINRFQD 249

[Close]
BLAST of CmoCh04G021420 vs. Swiss-Prot
Match: SL1_ORYSJ (Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-32
Identity = 112/281 (39.86%), Postives = 141/281 (50.18%), Query Frame = 1 

Query: 3   RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHR---------KKKSGGKEGNEESGKVYEC 62
           R +GSPLDLNNLP+++    KQ +E ++T            KKKS G  G +E+GKVYEC
Sbjct: 6   RQEGSPLDLNNLPDEF---GKQTVESSTTTAASSAEASRVTKKKSNG--GKDEAGKVYEC 65

Query: 63  RFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLA-- 122
           RFCSLKFCKSQALGGHMNRHRQ               +RETETLNRARQLVF ND+LA  
Sbjct: 66  RFCSLKFCKSQALGGHMNRHRQ---------------ERETETLNRARQLVFGNDSLAAV 125

Query: 123 ---------------VQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGS 182
                            +PPP +     M  G +     GGVG DP + LR         
Sbjct: 126 GAQLNFRDVNMGGGGAAAPPPTM----QMGGGGFR---GGGVGGDPCIPLR--------- 185

Query: 183 SPTTLLPPTPSPPPPPPPHQPYLYSSPSRPS-----SFPSYYPPP-----QASINDYYVG 242
                + P  SPP PPP H  YLY++ + PS     S+P+ YP P      A++ DY +G
Sbjct: 186 ----PVQPRLSPPQPPPYHH-YLYTTTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIG 232

[Close]
BLAST of CmoCh04G021420 vs. Swiss-Prot
Match: JGL_ARATH (Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.9e-21
Identity = 94/246 (38.21%), Postives = 115/246 (46.75%), Query Frame = 1 

Query: 1   MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLK 60
           M   + + LDLNNLP+D  RD     E+  +      SGG +E   + GK YECRFCSLK
Sbjct: 1   MRADENNTLDLNNLPDDPSRDIFPFFEEGFSS--SSSSGGFREKQTKDGKEYECRFCSLK 60

Query: 61  FCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHL 120
           F KSQALGGHMNRHRQ               +RETE+LN+AR+LV  ND+      PPH 
Sbjct: 61  FFKSQALGGHMNRHRQ---------------ERETESLNKARELVLRNDSF-----PPHQ 120

Query: 121 GCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQ 180
           G      P   +  G   +G       + +P R F  PGSS    L P            
Sbjct: 121 G-----PPSFSYHQGDVHIGDLTQFKPMMYPPRHFSLPGSSSILQLQP------------ 180

Query: 181 PYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYT 240
           PYLY         P   P PQ + N       +GN     HQT+ N      ++  SSYT
Sbjct: 181 PYLYP--------PLSSPFPQHNTN-------IGNNG-TRHQTLTNSVCGGRALPDSSYT 191

Query: 241 CIGAPV 242
            IGAPV
Sbjct: 241 FIGAPV 191

[Close]
BLAST of CmoCh04G021420 vs. TrEMBL
Match: A0A0A0KTC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G372190 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.7e-113
Identity = 224/280 (80.00%), Postives = 236/280 (84.29%), Query Frame = 1 

Query: 3   RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCK 62
           RS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFCK
Sbjct: 5   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 64

Query: 63  SQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGCC 122
           SQALGGHMNRHRQ               +RETETLNRARQLVFSNDNLA Q PPPHLGCC
Sbjct: 65  SQALGGHMNRHRQ---------------ERETETLNRARQLVFSNDNLAAQPPPPHLGCC 124

Query: 123 HSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYS 182
           HSM P +YH+A GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+
Sbjct: 125 HSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYLYN 184

Query: 183 SPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV 242
           SP+RPSSFPSYYPPPQASINDYYVGHVLGNP+QCSHQT+NYGS  SS+ESSSYTCIGAPV
Sbjct: 185 SPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS--SSVESSSYTCIGAPV 244

Query: 243 GPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF 278
           G AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Sbjct: 245 GHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 266

[Close]
BLAST of CmoCh04G021420 vs. TrEMBL
Match: M5XJF7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022855mg PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 176/306 (57.52%), Postives = 201/306 (65.69%), Query Frame = 1 

Query: 5   QGSPLDLNNLPEDYI-RDRKQIIEDTST--GHRKKKSGGKEGNEESGKVYECRFCSLKFC 64
           +G+PLDLNNLP+D+  RD KQ++ED+ +  G+RKKKSG K+G +E GKVYECRFCSLKFC
Sbjct: 9   EGNPLDLNNLPDDHFSRDGKQVVEDSFSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFC 68

Query: 65  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGC 124
           KSQALGGHMNRHRQGK               ETETLN+ARQLVFSNDNLA   PPPHLGC
Sbjct: 69  KSQALGGHMNRHRQGK---------------ETETLNKARQLVFSNDNLAAP-PPPHLGC 128

Query: 125 CHSMTPGSYHTAGSGG--VGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPP----PH 184
           CH +TP  YH   + G  +G DPTL LRFP RMF GSS +TL+PP P P  P P    P 
Sbjct: 129 CHPITPAGYHHPAAAGNNIGGDPTLPLRFPARMFSGSSSSTLVPPPPPPAVPQPGVQPPQ 188

Query: 185 QPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCS-------HQTMNYGSTRSS 244
           QPYLYSSPSRP    S+YP  Q S+NDYYVGHVL + +  S       H  +NYG+  S 
Sbjct: 189 QPYLYSSPSRPMFPASHYPHHQHSVNDYYVGHVLSSTSSSSPSQYGHGHPNVNYGA--SP 248

Query: 245 MESSSYTCIGAPVGPAATFGGRESGSGRDGS-----------------QQQRLDVPSSIN 278
            E ++YTCIGAPVGP    GG   G GRDGS                  QQRLD P SIN
Sbjct: 249 PEPANYTCIGAPVGPG---GGGGGGGGRDGSLHMNQEEGLNWSRSYAGTQQRLDPPPSIN 293

[Close]
BLAST of CmoCh04G021420 vs. TrEMBL
Match: F6HEW5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03600 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.0e-68
Identity = 172/323 (53.25%), Postives = 195/323 (60.37%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRDRKQIIEDTST---------GHRKKKSGGKEGNEESGKVYE 61
           MR + +PLDLNNLPED+ RD KQ+ ED+S+         G RKKKSGGK+G +E GKVYE
Sbjct: 65  MRPERNPLDLNNLPEDFTRDGKQVFEDSSSSVALIGFVAGCRKKKSGGKDGKDECGKVYE 124

Query: 62  CRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAV 121
           CRFCSLKFCKSQALGGHMNRHRQGK               ETETLNRARQ+VFSN+NLA 
Sbjct: 125 CRFCSLKFCKSQALGGHMNRHRQGK---------------ETETLNRARQIVFSNENLAA 184

Query: 122 QSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLR--FPTRMFPGSSPTTLLPPTPSPPP 181
           Q   PHLG    + PGS+H  G+ G   DPTL  R  +PTRMF GSS T L PP      
Sbjct: 185 QG-VPHLG-GQPIAPGSFHQTGNMG---DPTLPFRSVYPTRMFSGSSSTLLTPPP----- 244

Query: 182 PPPPHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSME 241
                QPYLY+SPSR  S+PS YPPP  S+NDYYVGHVL + +Q SH  +NYG       
Sbjct: 245 -----QPYLYASPSRLVSYPSQYPPP--SMNDYYVGHVLSSGSQYSHPGLNYGGA----S 304

Query: 242 SSSYTCIGAPVG---PAATFGGRES-----------------GSGRDGS----------- 278
            S+YTCIGAPVG   P +  GGR S                 G GRDGS           
Sbjct: 305 DSNYTCIGAPVGHGFPPSNGGGRGSELGGSGGGGGGGGGGGGGGGRDGSLQNQEEGLNWG 350

[Close]
BLAST of CmoCh04G021420 vs. TrEMBL
Match: W9RUU4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014642 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.7e-67
Identity = 164/282 (58.16%), Postives = 194/282 (68.79%), Query Frame = 1 

Query: 3   RSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFC 62
           R +G+PLDLNNLP+D+ RD ++Q++ED STG+RKKKSGGKEG ++ GKVYECRFCSLKFC
Sbjct: 5   RPEGNPLDLNNLPDDFSRDGKQQLLEDASTGYRKKKSGGKEGKDDCGKVYECRFCSLKFC 64

Query: 63  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGC 122
           KSQALGGHMNRHRQG       ++F +   RETETLNRARQLVFSNDNLA QS   HL C
Sbjct: 65  KSQALGGHMNRHRQG-------MSFQYFFKRETETLNRARQLVFSNDNLAAQS---HLSC 124

Query: 123 CHSMT-PGSY-HTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPP-----P 182
           CH +T PGSY H    G +G D TL LRFPTRMF  SS + + PP   PPPP P     P
Sbjct: 125 CHPITPPGSYHHHPPPGNIGPDTTLPLRFPTRMFSNSSSSFISPP---PPPPLPSQAVQP 184

Query: 183 HQPYLYSSPSRPSSFPSYYPPPQ-ASIND-YYVGHVLGNPAQCSHQTMNYGSTRSSMESS 242
            QPYLY+SP+RP SF S+YP  Q A++ND YYVGHVL +    + Q  +   + ++   S
Sbjct: 185 SQPYLYTSPTRPLSFSSHYPAHQHAAVNDNYYVGHVLSSNTSSTSQYCHPNISYAAAAES 244

Query: 243 SYTCIGAPVGPAATF---GGR------ESGS------GRDGS 260
           +YTCIGAPVG A  F    GR      ESGS      GRDGS
Sbjct: 245 NYTCIGAPVGHAHGFVPGSGRAAAELAESGSVGGGSGGRDGS 273

[Close]
BLAST of CmoCh04G021420 vs. TrEMBL
Match: K7N2W4_SOYBN (JAG1 OS=Glycine max GN=Ln PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.5e-66
Identity = 156/289 (53.98%), Postives = 185/289 (64.01%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRDRKQIIED--TSTGHRKKKSGGKEGNEESGKVYECRFCSLK 61
           MR + +PLDLNNLP++Y RD KQ++ED  +S+G RKKKSGGK+G +E GKVYECRFCSLK
Sbjct: 1   MRPERNPLDLNNLPDEYSRDGKQVLEDHTSSSGCRKKKSGGKDGKDECGKVYECRFCSLK 60

Query: 62  FCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHL 121
           FCKSQALGGHMNRHRQ               +RETETLN+ARQLVF  D+       PHL
Sbjct: 61  FCKSQALGGHMNRHRQ---------------ERETETLNQARQLVFRCDHNIAAQGAPHL 120

Query: 122 GCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYL 181
           GCC ++  G YH +G      DPT+ LRFP R F GSS T +    PSPPPPPPP +PYL
Sbjct: 121 GCCQTIGTGGYHPSG------DPTVPLRFP-RYFSGSSSTHM---PPSPPPPPPPQRPYL 180

Query: 182 YSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGA 241
           Y SP+RP SF S + P Q ++NDYYVGHV+           ++G       + SYTCIGA
Sbjct: 181 YPSPTRPVSFGSSHFPLQHAVNDYYVGHVMSGG--------SHGHYVGGESTRSYTCIGA 240

Query: 242 PVGPAATFGGRESGS----------GRDGS-QQQRLDVPSSINRFQDGF 278
           PVG    F G + GS          GR  S  Q RLD PS+INRFQDGF
Sbjct: 241 PVGQGGGFAGGKEGSAVQEEGLSTWGRGYSGAQDRLDPPSAINRFQDGF 256

[Close]
BLAST of CmoCh04G021420 vs. TAIR10
Match: AT1G68480.1 (AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41
Identity = 122/288 (42.36%), Postives = 158/288 (54.86%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKF 61
           MR + + LDLNNLP+D+ +D  KQ +E+ S+  ++KK G KEG +ESGKVYECRFCSLKF
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 62  CKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLG 121
           CKSQALGGHMNRHRQ               +RETETLN+ARQLV+ ND +   +PP    
Sbjct: 61  CKSQALGGHMNRHRQ---------------ERETETLNQARQLVYRNDTI---TPP---- 120

Query: 122 CCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPY 181
               ++P  YH        +DPT+  S+     ++PGSS T L+P  P PPPPPP   PY
Sbjct: 121 ---GISPFGYHHT------TDPTIYRSVYSSPMIYPGSSSTNLVPQPPMPPPPPP--YPY 180

Query: 182 LYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIG 241
             +  S  + F  YY      +N  + G    +P+     T        S     YTC+G
Sbjct: 181 SSNQYSPHNHFNDYY------LNPSFRGSRSISPSPNLPTTTTVDYMADSPVEPGYTCVG 240

Query: 242 APV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD 276
           AP+        GP+      E   GRDG + +QRLD  +   INRFQD
Sbjct: 241 APIGPTGFPIRGPSIVRAPLEPPQGRDGDASRQRLDHSLRFPINRFQD 249

[Close]
BLAST of CmoCh04G021420 vs. TAIR10
Match: AT1G13400.1 (AT1G13400.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 4.4e-22
Identity = 94/246 (38.21%), Postives = 115/246 (46.75%), Query Frame = 1 

Query: 1   MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLK 60
           M   + + LDLNNLP+D  RD     E+  +      SGG +E   + GK YECRFCSLK
Sbjct: 1   MRADENNTLDLNNLPDDPSRDIFPFFEEGFSS--SSSSGGFREKQTKDGKEYECRFCSLK 60

Query: 61  FCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHL 120
           F KSQALGGHMNRHRQ               +RETE+LN+AR+LV  ND+      PPH 
Sbjct: 61  FFKSQALGGHMNRHRQ---------------ERETESLNKARELVLRNDSF-----PPHQ 120

Query: 121 GCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQ 180
           G      P   +  G   +G       + +P R F  PGSS    L P            
Sbjct: 121 G-----PPSFSYHQGDVHIGDLTQFKPMMYPPRHFSLPGSSSILQLQP------------ 180

Query: 181 PYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYT 240
           PYLY         P   P PQ + N       +GN     HQT+ N      ++  SSYT
Sbjct: 181 PYLYP--------PLSSPFPQHNTN-------IGNNG-TRHQTLTNSVCGGRALPDSSYT 191

Query: 241 CIGAPV 242
            IGAPV
Sbjct: 241 FIGAPV 191

[Close]
BLAST of CmoCh04G021420 vs. NCBI nr
Match: gi|778702278|ref|XP_011655169.1| (PREDICTED: zinc finger protein JAGGED [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.8e-113
Identity = 225/281 (80.07%), Postives = 237/281 (84.34%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFC 61
           MRS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 62  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGC 121
           KSQALGGHMNRHRQ               +RETETLNRARQLVFSNDNLA Q PPPHLGC
Sbjct: 61  KSQALGGHMNRHRQ---------------ERETETLNRARQLVFSNDNLAAQPPPPHLGC 120

Query: 122 CHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLY 181
           CHSM P +YH+A GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY
Sbjct: 121 CHSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYLY 180

Query: 182 SSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAP 241
           +SP+RPSSFPSYYPPPQASINDYYVGHVLGNP+QCSHQT+NYGS  SS+ESSSYTCIGAP
Sbjct: 181 NSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS--SSVESSSYTCIGAP 240

Query: 242 VGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF 278
           VG AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Sbjct: 241 VGHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 263

[Close]
BLAST of CmoCh04G021420 vs. NCBI nr
Match: gi|700195779|gb|KGN50956.1| (hypothetical protein Csa_5G372190 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 6.7e-113
Identity = 224/280 (80.00%), Postives = 236/280 (84.29%), Query Frame = 1 

Query: 3   RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCK 62
           RS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFCK
Sbjct: 5   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 64

Query: 63  SQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGCC 122
           SQALGGHMNRHRQ               +RETETLNRARQLVFSNDNLA Q PPPHLGCC
Sbjct: 65  SQALGGHMNRHRQ---------------ERETETLNRARQLVFSNDNLAAQPPPPHLGCC 124

Query: 123 HSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYS 182
           HSM P +YH+A GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+
Sbjct: 125 HSMAPANYHSAGGSGNVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYLYN 184

Query: 183 SPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV 242
           SP+RPSSFPSYYPPPQASINDYYVGHVLGNP+QCSHQT+NYGS  SS+ESSSYTCIGAPV
Sbjct: 185 SPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS--SSVESSSYTCIGAPV 244

Query: 243 GPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF 278
           G AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Sbjct: 245 GHAAVGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 266

[Close]
BLAST of CmoCh04G021420 vs. NCBI nr
Match: gi|659131633|ref|XP_008465782.1| (PREDICTED: zinc finger protein JAGGED [Cucumis melo])

HSP 1 Score: 412.5 bits (1059), Expect = 5.7e-112
Identity = 225/282 (79.79%), Postives = 236/282 (83.69%), Query Frame = 1 

Query: 2   MRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFC 61
           MRS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFC
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 62  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQ-SPPPHLG 121
           KSQALGGHMNRHRQ               +RETETLNRARQLVFSNDNLA Q  PPPHLG
Sbjct: 61  KSQALGGHMNRHRQ---------------ERETETLNRARQLVFSNDNLAAQPPPPPHLG 120

Query: 122 CCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYL 181
           CCHSM P +YHTA GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYL
Sbjct: 121 CCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYL 180

Query: 182 YSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGA 241
           Y+SP+RPSSFPSYYPPPQASINDYYVGHVLGNP+QCSHQT+NYGS  S +ESSSYTCIGA
Sbjct: 181 YNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS--SPVESSSYTCIGA 240

Query: 242 PVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF 278
           PVG AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Sbjct: 241 PVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 264

[Close]
BLAST of CmoCh04G021420 vs. NCBI nr
Match: gi|645276701|ref|XP_008243413.1| (PREDICTED: zinc finger protein JAGGED [Prunus mume])

HSP 1 Score: 303.9 bits (777), Expect = 2.9e-79
Identity = 178/309 (57.61%), Postives = 204/309 (66.02%), Query Frame = 1 

Query: 5   QGSPLDLNNLPEDYI-RDRKQIIEDTST--GHRKKKSGGKEGNEESGKVYECRFCSLKFC 64
           +G+PLDLNNLP+D+  RD KQ++ED+S+  G+RKKKSG K+G +E GKVYECRFCSLKFC
Sbjct: 27  EGNPLDLNNLPDDHFSRDGKQVVEDSSSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFC 86

Query: 65  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGC 124
           KSQALGGHMNRHRQ               +RETETLN+ARQLVFSNDNLA   PPPHLGC
Sbjct: 87  KSQALGGHMNRHRQ---------------ERETETLNKARQLVFSNDNLAAPPPPPHLGC 146

Query: 125 CHSMTPGSYH--TAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSP----PPPPPPH 184
           CH +TP  YH   A    +G DPTL+LRFP RMF GSS + L+PP P P    P   PP 
Sbjct: 147 CHPITPAGYHHPAAAGNNIGGDPTLTLRFPARMFSGSSSSALVPPPPPPGVPQPGVQPPQ 206

Query: 185 QPYLYSSPSRPSSFP-SYYPPPQASINDYYVGHVLGNPAQCS--------HQTMNYGSTR 244
           QPYLYSSPSRP SFP S+YP  Q S+NDYYVGHVL + +  S        H  +NYG+  
Sbjct: 207 QPYLYSSPSRPMSFPASHYPHHQHSVNDYYVGHVLSSTSSSSSPSQYGHGHPNVNYGA-- 266

Query: 245 SSMESSSYTCIGAPVGP-AATFGGRESGSGRDGS-----------------QQQRLDVPS 278
           S  E ++YTCIGAPVGP     GG   G GRDGS                  QQRLD P 
Sbjct: 267 SPPEPANYTCIGAPVGPGGGGGGGGGGGGGRDGSLHMNQEEGLNWSRSYAGTQQRLDPPP 318

[Close]
BLAST of CmoCh04G021420 vs. NCBI nr
Match: gi|596258237|ref|XP_007224850.1| (hypothetical protein PRUPE_ppa022855mg [Prunus persica])

HSP 1 Score: 297.4 bits (760), Expect = 2.7e-77
Identity = 176/306 (57.52%), Postives = 201/306 (65.69%), Query Frame = 1 

Query: 5   QGSPLDLNNLPEDYI-RDRKQIIEDTST--GHRKKKSGGKEGNEESGKVYECRFCSLKFC 64
           +G+PLDLNNLP+D+  RD KQ++ED+ +  G+RKKKSG K+G +E GKVYECRFCSLKFC
Sbjct: 9   EGNPLDLNNLPDDHFSRDGKQVVEDSFSVAGYRKKKSGAKDGKDECGKVYECRFCSLKFC 68

Query: 65  KSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGC 124
           KSQALGGHMNRHRQGK               ETETLN+ARQLVFSNDNLA   PPPHLGC
Sbjct: 69  KSQALGGHMNRHRQGK---------------ETETLNKARQLVFSNDNLAAP-PPPHLGC 128

Query: 125 CHSMTPGSYHTAGSGG--VGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPP----PH 184
           CH +TP  YH   + G  +G DPTL LRFP RMF GSS +TL+PP P P  P P    P 
Sbjct: 129 CHPITPAGYHHPAAAGNNIGGDPTLPLRFPARMFSGSSSSTLVPPPPPPAVPQPGVQPPQ 188

Query: 185 QPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCS-------HQTMNYGSTRSS 244
           QPYLYSSPSRP    S+YP  Q S+NDYYVGHVL + +  S       H  +NYG+  S 
Sbjct: 189 QPYLYSSPSRPMFPASHYPHHQHSVNDYYVGHVLSSTSSSSPSQYGHGHPNVNYGA--SP 248

Query: 245 MESSSYTCIGAPVGPAATFGGRESGSGRDGS-----------------QQQRLDVPSSIN 278
            E ++YTCIGAPVGP    GG   G GRDGS                  QQRLD P SIN
Sbjct: 249 PEPANYTCIGAPVGPG---GGGGGGGGRDGSLHMNQEEGLNWSRSYAGTQQRLDPPPSIN 293

The following BLAST results are available for this feature:
BLAST of CmoCh04G021420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JAG_ARATH2.6e-4042.36Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1[more]
SL1_ORYSJ2.0e-3239.86Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=... [more]
JGL_ARATH7.9e-2138.21Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1[more]
BLAST of CmoCh04G021420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTC2_CUCSA4.7e-11380.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G372190 PE=4 SV=1[more]
M5XJF7_PRUPE1.9e-7757.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022855mg PE=4 SV=1[more]
F6HEW5_VITVI6.0e-6853.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03600 PE=4 SV=... [more]
W9RUU4_9ROSA1.7e-6758.16Uncharacterized protein OS=Morus notabilis GN=L484_014642 PE=4 SV=1[more]
K7N2W4_SOYBN2.5e-6653.98JAG1 OS=Glycine max GN=Ln PE=4 SV=1[more]
BLAST of CmoCh04G021420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68480.11.5e-4142.36 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G13400.14.4e-2238.21 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmoCh04G021420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702278|ref|XP_011655169.1|1.8e-11380.07PREDICTED: zinc finger protein JAGGED [Cucumis sativus][more]
gi|700195779|gb|KGN50956.1|6.7e-11380.00hypothetical protein Csa_5G372190 [Cucumis sativus][more]
gi|659131633|ref|XP_008465782.1|5.7e-11279.79PREDICTED: zinc finger protein JAGGED [Cucumis melo][more]
gi|645276701|ref|XP_008243413.1|2.9e-7957.61PREDICTED: zinc finger protein JAGGED [Prunus mume][more]
gi|596258237|ref|XP_007224850.1|2.7e-7757.52hypothetical protein PRUPE_ppa022855mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G021420.1CmoCh04G021420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 53..73
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 51..78
score: 8
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 91..125
score: 1.9E-47coord: 156..186
score: 1.9E-47coord: 1..75
score: 1.9
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 48..78
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G021420CmaCh04G020430Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G021420Lsi09G010330Bottle gourd (USVL1VR-Ls)cmolsiB612
CmoCh04G021420Cp4.1LG01g17840Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G021420Carg27852Silver-seed gourdcarcmoB0896
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G021420CmoCh15G010340Cucurbita moschata (Rifu)cmocmoB270
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G021420Watermelon (97103) v2cmowmbB680
CmoCh04G021420Watermelon (97103) v2cmowmbB740
CmoCh04G021420Wax gourdcmowgoB0827
CmoCh04G021420Wax gourdcmowgoB0909
CmoCh04G021420Cucurbita pepo (Zucchini)cmocpeB682
CmoCh04G021420Bottle gourd (USVL1VR-Ls)cmolsiB613
CmoCh04G021420Bottle gourd (USVL1VR-Ls)cmolsiB677
CmoCh04G021420Cucumber (Gy14) v2cgybcmoB637
CmoCh04G021420Melon (DHL92) v3.6.1cmomedB719
CmoCh04G021420Melon (DHL92) v3.6.1cmomedB744