CmoCh15G007100 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCTGGTTTCGATTTTGAGCTTAGTAGGTTAGATCCAGTATTTTTTTATGGAAGACGTGGTATTCTTACGGCGCTTTGATTTGATTGCATATCTCTCGGTCTCTTTTCTAACTAATTGTTAGAAGCTTCGTGAATATTATGTTATCAAATATGAAATGGAAAAATTGTACGCAAAAGATCAAACCATAGGAATGGAAATAAACGTAGGTCATGAATTTAATCACGAAAAGGGGAAAAATCCTCGAATTTTAGTTGAAAAGAGAGCGATGTTCTACGACCTAATGGAATGATAGGGAAAATAGAGAAATATGGTGAATGAGTTCGGGAAAATTTTAGTCATTTAATTACATAGATCAGACACATTGCTTGATGGTTTTATTATGTTGTATGAGTTGAATTCTTATTTCATTACCTTGAACTTCAAATTTAATGGTGCCATTTTCTCAAGCTGTTACTGCCACTTCAAAGATGAAGGTATTTGGTTCTTTCTCTGAGTGTGTGGATAAAGTGACAGCGGGTTTATTACTTCTCCACTCTAGTTCTTGCTCTACACTTTGTTTATCATTTATATGGTCATAGACTTTAGGGAATTTAATCAAGAATAAAAGGCCTGGAAAATGGCTCTTCATTCGAAGGGTTACCATTCGTTTAAGAGGAACTTTTTGTCTTTTTATTATGAAATGCTGCTGGTCAATGTAAACTTTAAAATTGCATTTGCTTTTTGTTTATCTGGTTCTTCAGTGTTAGTGTTCAATGTTAAGTCCATGTCTTAAAGCATGATATATTGCTTCTTTATGGCATATATTTGTTAATCTCTACCTGATTGGGAGCAATCGACAAGGATCTTGTTAAATTTTGTGAAATCACCATAATTTCAACTGAATCAATGAGCTAAAAATGTATTAGATTCCCATGGTTTGGCAGTTTTTTCTTCATTCTCTGCAAGTGCTGGTTAAGAATTTGAATTTTTTTCATGCACCCTTGAAAATGTGCCATCGACATTAGGAGGCTATCAGGAAAAGTTTAATGTTCTCAACTTGTTATTGGGATTTCTCCTTTTGGTTGTCTGTTTAGCAGGATTCTCTAAGTGGGTTTTTGGGACAAGAAGTTGTTTAGCATAGGTTTATTGATCGTGGATGTTTCTCCGAGTTGTTGATTCTGTTGAGCATTACTGACCAACTGTGCACTTGCGTGATATCTTGTAGGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATAATTGGTGTGTTCTTTACCACCTTGTTTTCGGTAAGTTGTTCCTTATTCTTGCGCTGGAAAAAAGTTAGCATTCAGAACAGCCATCATCTTGGGAAGGAAGATTAAGTTTCCATACTTCTTTGTAGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTGGTCGTCCACGCGGTCCACCTCGCGGTCTCGATAACGTTCGAGGGATCGATCATAGTAAGTTGAATGCTTATTTTTTTGGAACTCTTTTCCCCCATACATGGATTTGATTTGATTTGATATATTTACTGCTCTGCAATCTTAACTTATTGCAATCAGGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAA ATGATTCTGGTTTCGATTTTGAGCTTAGTAGGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATAATTGGTGTGTTCTTTACCACCTTGTTTTCGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTGGTCGTCCACGCGGTCCACCTCGCGGTCTCGATAACGTTCGAGGGATCGATCATAGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAA ATGATTCTGGTTTCGATTTTGAGCTTAGTAGGCGTTGTGAAATCCCAGAGATCATTCTGGCGTCTCAAAACCATCACTGATTTCTTCTGGGCCATCGTAAACATAATTGGTGTGTTCTTTACCACCTTGTTTTCGATGGAAAAATCAGAGGCTTATAGAAAAGGATCCGGTTCTGGAAAGAAATGGGACGGTGGCGGCCCTGGAGGTCCTGGATCAGGGCCTTACGGTGGTGGTCGTCCACGCGGTCCACCTCGCGGTCTCGATAACGTTCGAGGGATCGATCATAGTTCATTACCTGCTTGTGGCTCGTGCTGTGGCTAA
BLAST of CmoCh15G007100 vs. TrEMBL
Match: A0A0A0KDW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040550 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 5.5e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1
BLAST of CmoCh15G007100 vs. TrEMBL
Match: A0A068V5M5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016673001 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.3e-42 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmoCh15G007100 vs. TrEMBL
Match: M5XZ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013824mg PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.1e-41 Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 1
BLAST of CmoCh15G007100 vs. TrEMBL
Match: A5CA43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015657 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 5.3e-41 Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 1
BLAST of CmoCh15G007100 vs. TrEMBL
Match: A9PDX9_POPTR (Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0005s15960g PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-40 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 1
BLAST of CmoCh15G007100 vs. TAIR10
Match: AT4G08230.1 (AT4G08230.1 glycine-rich protein) HSP 1 Score: 123.6 bits (309), Expect = 7.1e-29 Identity = 70/107 (65.42%), Postives = 80/107 (74.77%), Query Frame = 1
BLAST of CmoCh15G007100 vs. NCBI nr
Match: gi|449446207|ref|XP_004140863.1| (PREDICTED: selenoprotein K [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 7.9e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1
BLAST of CmoCh15G007100 vs. NCBI nr
Match: gi|659089743|ref|XP_008445670.1| (PREDICTED: selenoprotein K [Cucumis melo]) HSP 1 Score: 191.4 bits (485), Expect = 7.9e-46 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1
BLAST of CmoCh15G007100 vs. NCBI nr
Match: gi|661880528|emb|CDP15814.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 177.9 bits (450), Expect = 9.0e-42 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmoCh15G007100 vs. NCBI nr
Match: gi|470109096|ref|XP_004290838.1| (PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 1
BLAST of CmoCh15G007100 vs. NCBI nr
Match: gi|596288663|ref|XP_007225974.1| (hypothetical protein PRUPE_ppa013824mg [Prunus persica]) HSP 1 Score: 177.2 bits (448), Expect = 1.5e-41 Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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