Cla97C08G148230 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G148230
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Glycine-rich family protein
Location	Cla97Chr08 : 15998972 .. 16001489 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTACGTTGAACGAGGTTCTATCTCAATTTCCATTTGGTTCTATTTCGATTTCACTGCTGAGAGATTGGTTGATCACTTTTGGATTAGGAACTAGTCTAGATTTTGTTTCCCTGGTTGATCACTTTTGGTTCTCCTCTTGTTTTCATATATGATCCTTGTGTGTTTGGGTTGTACATGTATTATCTTTGAATCCTTTCCCTATTTCCGTGGTATTATGCATTTCGTGATTCTGATTTTGATTTTGGGCTTAATAGGCTAGATCCAATAAAATTTTCTGCAAGGCGTGGTATTTCTGAGGAACAATTTTCTGATTGCATATCTCTTGGTCTAATTTTTCTAACCATTTGTCAGAAACTTCCTGAATTTTATGTTATCATATATCAAATGAATCAAATGGAAAAATCGTACACAAAAGATAAAACCACAGGAATGGAAGTAAACCTAGGTCACGAATTTAATAATGAGAGGGCAAAAAACCCTCGAATTCCGGTTAAAGAGAGAGCGATGTTCTACGACCTAATGGAATGACAGGGAAAATAGAGAAATGCGGCGATGAGGTCGGGAAATTTCTTGCCATTATTTGATAAGTTAGATAAAATACATACCTTAACGGTCTTATTATGTTGTATGAGTTGAATCCTTATTTCCTTACCCTAAACTTCAAATTTGGTGGTGCCATTTTTACAAGCTGTTACTGACACTTTAAGGATGAAGGGATTTGGTTATTTCTTTGAGTGTGTGGTTGAAGTGACAGTTTTTCTAATTCCTCCTCTCTGTTTCCAGTTCTACACTGTGTTTATCATCTCTATGGTTTTAGTGAAATGGTCCGAGGATAAAAATGTCAGGAAAATGACTCTTCACTTAAAAAGTTATCACTCGATTTAGAGGATTTTTTGTTTCCTCCTTATGAAATGCAACTGCTCAATATAAAATATAAAATTGTATTGTAGATTGCAGTTCATAGTGGAAAACATAAATATCAGTGCCTGTGAAAATTTGATGAATAAACAGATATATTTTCTTTTAAACCTGTTTTATTTGCTTTATGTCTGTCTGGCTCTTCAGTATTAGTGATCAATATTAGGTCCATGTTATAAATCAAAGTGTAGAGGTATTCATACCCTCGTTTTGTTAACCACTCCCTGATTGCGATAAACGTCTTGTTAAATTTTGTGAAATTACCATAGCTGTATAGAGAGAAGATATTATGAGTTTTAAATCTTAATGAGCATCATAACTTTGTTTTTCATAACTTTATATTATTCCCATGGTTTAGCAGTTTTATGCACTTTCTTCATATGCTGGTTAAGAAATTGATGTTTTATGGAGTCTTCTTTATCATGCACCCTTAAAAATGTGTCGACCTAAGCATGTTATTAGGAAGAGTGTAATTTTATCAACACGTGCTTGGAGTTCTTTTGGTTGTCTGTTTAGCAGGATGATCTAGATCTGTAGATTTCTTAGATTATAACTAGGCTTTGGTATTCCTTTTGGTTGCTTCATTCTGGTGAAATCTCTCACATTTAATCATGGGGGATGTTCATGTTTCCGAAGCATAAATTGATTCTAAATTTGCCGGTATTAAACAGCTCTGTGTAATTTCCTACTCCACTCTGCTACCTGTCTCCTGGTACACCCGTTTTACATCTTTGTCAGAGTGCTTTGATAGAAGAACCGTTTGTGTGTTAAGTTATCGAGTATTGATCTGTGTTTTTTTTCACTTTCGTTTGCTTATCATCTTGTCTACATTAATGACCTGTTTCAACTCCTCTACTTACTGCTGTCTGTGTGACATTGTTTTTTCAATTATCTATTTCAATTGATTGTATGTTCAGAAGTTTTAAGAGGAGTTAAATTCCCTTCACGTTGCACAGTGTCCCATCTTATCTGAATTGCCATCTTCAGATTGGTAAACTTGGGGCTATTCTTATGTGGGTTGGACATGTTACTATTCTTGAATACTTGGAACTCTGAAGTTGGATGTTTCCGTGTTATTGATTTTGTTGAGCATGTACTGACCAACTATGCATTTGCGGTGATATCTTGTAGGTGTAGTGAAATCCCAAAGGTCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGGTAAGTTGCTTATTGCCTTGAAAGAAAATGTTAGCATTCAGAACCGTCATGTTGGGAAGGAAGCTAAATTCCCATGCTTCTTTGTAGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGTGGTCTAGACAATGTTCGAGGGATTGATCACAGTATGTTGAAAGCTGATTTTTGAACTTATTTTCTCCATGCTTTCATTTGATTTATTTACTGATATGTGATCTGAATTTGATGGCAATCAGGTTCACTACCTGCCTGTGGCTCGTGCTGTGGCTAA

mRNA sequence

ATGGCGTACGTTGAACGAGGTGTAGTGAAATCCCAAAGGTCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGTGGTCTAGACAATGTTCGAGGGATTGATCACAGTTCACTACCTGCCTGTGGCTCGTGCTGTGGCTAA

Coding sequence (CDS)

ATGGCGTACGTTGAACGAGGTGTAGTGAAATCCCAAAGGTCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGTGGTCTAGACAATGTTCGAGGGATTGATCACAGTTCACTACCTGCCTGTGGCTCGTGCTGTGGCTAA

Protein sequence

MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

Homology

[Close]

BLAST of Cla97C08G148230 vs. NCBI nr
Match: XP_004140863.1 (PREDICTED: selenoprotein K [Cucumis sativus] >KGN45966.1 hypothetical protein Csa_6G040550 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. NCBI nr
Match: XP_008445670.1 (PREDICTED: selenoprotein K [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. NCBI nr
Match: XP_022964558.1 (selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [Cucurbita moschata] >XP_022989819.1 selenoprotein K [Cucurbita maxima] >XP_023516420.1 selenoprotein K-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. NCBI nr
Match: XP_022993311.1 (selenoprotein K-like [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXX         LDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXGRPRGPPRSLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. NCBI nr
Match: XP_022141709.1 (selenoprotein K [Momordica charantia])

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35
Identity = 94/101 (93.07%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVK +RS WRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYR GSGSGKKWDG
Sbjct: 1   MAYVERGVVKPKRSIWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRNGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GG XXXXXXXXXXXXXXXXXXLDNVRGIDH+SLPACGSCCG
Sbjct: 61  GGPXXXXXXXXXXXXXXXXXXLDNVRGIDHNSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. TrEMBL
Match: tr|A0A1S3BE45|A0A1S3BE45_CUCME (selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.4e-38
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. TrEMBL
Match: tr|A0A0A0KDW6|A0A0A0KDW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.4e-38
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. TrEMBL
Match: tr|A0A2P6PX33|A0A2P6PX33_ROSCH (Putative selenoprotein SelK/SelG OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0295131 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34
Identity = 92/101 (91.09%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS+RS WRLKTITDFFWAI+N+IGVFF T+FSMEKS+AYRKGSG+ KKWDG
Sbjct: 46  MAYVERGVVKSKRSIWRLKTITDFFWAIVNLIGVFFATMFSMEKSDAYRKGSGASKKWDG 105

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 106 GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 146

[Close]

BLAST of Cla97C08G148230 vs. TrEMBL
Match: tr|M5XZ42|M5XZ42_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G502600 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-34
Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS+RS WRLKTITDFFWAI+N+IGVFF T+FSMEKS+AYRKG  SGKKWDG
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNLIGVFFATMFSMEKSDAYRKGLASGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. TrEMBL
Match: tr|A0A2I0J906|A0A2I0J906_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_026888 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-34
Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRS WRL+TITDFFWAI N IGVFF T+FSMEKS+AY+KGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSIWRLRTITDFFWAIFNFIGVFFATMFSMEKSDAYQKGSGSGKKWDG 60

Query: 61  GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
           GG XXXXXXXXXXXXXXXXXXL+NVRGIDHSSLPACGSCCG
Sbjct: 61  GGPXXXXXXXXXXXXXXXXXXLNNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of Cla97C08G148230 vs. Swiss-Prot
Match: sp|Q32PE3|SELK_BOVIN (Selenoprotein K OS=Bos taurus OX=9913 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 25/63 (39.68%), Postives = 32/63 (50.79%), Query Frame = 0


Query: 1  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 60
          M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    GS S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGSSSDSRY 60

Query: 61 DGG 62
          D G
Sbjct: 61 DDG 63

[Close]

BLAST of Cla97C08G148230 vs. Swiss-Prot
Match: sp|Q9Y6D0|SELK_HUMAN (Selenoprotein K OS=Homo sapiens OX=9606 GN=SELENOK PE=1 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04
Identity = 24/63 (38.10%), Postives = 32/63 (50.79%), Query Frame = 0


Query: 1  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 60
          M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 61 DGG 62
          D G
Sbjct: 61 DDG 63

[Close]

BLAST of Cla97C08G148230 vs. Swiss-Prot
Match: sp|Q4R8M1|SELK_MACFA (Selenoprotein K OS=Macaca fascicularis OX=9541 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04
Identity = 24/63 (38.10%), Postives = 32/63 (50.79%), Query Frame = 0


Query: 1  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 60
          M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 61 DGG 62
          D G
Sbjct: 61 DDG 63

[Close]

BLAST of Cla97C08G148230 vs. Swiss-Prot
Match: sp|Q6S9C4|SELK_CHILA (Selenoprotein K OS=Chinchilla lanigera OX=34839 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-04
Identity = 27/65 (41.54%), Postives = 34/65 (52.31%), Query Frame = 0


Query: 1  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLF--SMEKSEAYRKGSGSGK 60
          M Y+  G V   RS   WRL  ITDFFW I   + +FF TL    ++K   YR  S S  
Sbjct: 1  MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKGRGYRNSSDS-- 60

Query: 61 KWDGG 62
          ++D G
Sbjct: 61 RYDDG 63

[Close]

BLAST of Cla97C08G148230 vs. Swiss-Prot
Match: sp|P59798|SELK_RAT (Selenoprotein K OS=Rattus norvegicus OX=10116 GN=Selenok PE=3 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 7.2e-04
Identity = 24/63 (38.10%), Postives = 30/63 (47.62%), Query Frame = 0


Query: 1  MAYVERGVVKSQR--SFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 60
          M Y+  G V   R  S WRL  ITDFFW I   +  FF TL   +  +    G  S  ++
Sbjct: 1  MVYISNGQVLDSRNQSPWRLSFITDFFWGIAEFVVFFFKTLLQQDVKKRRGYGGSSDSRY 60

Query: 61 DGG 62
          D G
Sbjct: 61 DDG 63

[Close]

BLAST of Cla97C08G148230 vs. TAIR10
Match: AT4G08230.1 (glycine-rich protein)

HSP 1 Score: 97.4 bits (241), Expect = 5.2e-21
Identity = 73/113 (64.60%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVE GVVK++R  WRL+TI DFF +IIN+I VFF T+FSMEKS+AYRKGS   KKW G
Sbjct: 1   MAYVEGGVVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGG 60

Query: 61  ------------GGXXXXXXXXXXXXXXXXXXXLDNVRGIDHSSLPACGSCCG 102
                         XXXXXXXXXXXXXXXXXXX       DH+SLPACGSCCG
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADHNSLPACGSCCG 113

The following BLAST results are available for this feature:

BLAST of Cla97C08G148230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140863.1	6.6e-38	99.01	PREDICTED: selenoprotein K [Cucumis sativus] >KGN45966.1 hypothetical protein Cs...	[more]
XP_008445670.1	6.6e-38	99.01	PREDICTED: selenoprotein K [Cucumis melo]	[more]
XP_022964558.1	8.6e-38	98.02	selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [...	[more]
XP_022993311.1	8.6e-38	89.11	selenoprotein K-like [Cucurbita maxima]	[more]
XP_022141709.1	3.1e-35	93.07	selenoprotein K [Momordica charantia]	[more]

BLAST of Cla97C08G148230 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BE45\|A0A1S3BE45_CUCME	4.4e-38	99.01	selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1	[more]
tr\|A0A0A0KDW6\|A0A0A0KDW6_CUCSA	4.4e-38	99.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1	[more]
tr\|A0A2P6PX33\|A0A2P6PX33_ROSCH	2.2e-34	91.09	Putative selenoprotein SelK/SelG OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g029...	[more]
tr\|M5XZ42\|M5XZ42_PRUPE	5.0e-34	91.09	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G502600 PE=4 SV=1	[more]
tr\|A0A2I0J906\|A0A2I0J906_PUNGR	6.5e-34	90.10	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_026888 PE=4 SV=1	[more]

BLAST of Cla97C08G148230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q32PE3\|SELK_BOVIN	1.1e-04	39.68	Selenoprotein K OS=Bos taurus OX=9913 GN=SELENOK PE=3 SV=3	[more]
sp\|Q9Y6D0\|SELK_HUMAN	1.5e-04	38.10	Selenoprotein K OS=Homo sapiens OX=9606 GN=SELENOK PE=1 SV=3	[more]
sp\|Q4R8M1\|SELK_MACFA	1.5e-04	38.10	Selenoprotein K OS=Macaca fascicularis OX=9541 GN=SELENOK PE=3 SV=3	[more]
sp\|Q6S9C4\|SELK_CHILA	4.2e-04	41.54	Selenoprotein K OS=Chinchilla lanigera OX=34839 GN=SELENOK PE=3 SV=3	[more]
sp\|P59798\|SELK_RAT	7.2e-04	38.10	Selenoprotein K OS=Rattus norvegicus OX=10116 GN=Selenok PE=3 SV=2	[more]

BLAST of Cla97C08G148230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08230.1	5.2e-21	64.60	glycine-rich protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024491	Se_SelK/SelG

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0006457	protein folding
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0051716	cellular response to stimulus
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009408	response to heat
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0032469	endoplasmic reticulum calcium ion homeostasis
biological_process	GO:0006984	ER-nucleus signaling pathway
biological_process	GO:0008150	biological_process
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G148230.1	Cla97C08G148230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024491	Selenoprotein SelK/SelG	PFAM	PF10961	SelK_SelG	coord: 2..79 e-value: 1.3E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..91
None	No IPR available	PANTHER	PTHR16875	FAMILY NOT NAMED	coord: 1..101
None	No IPR available	PRODOM	PD353114		coord: 1..49 e-value: 2.0E-4 score: 100.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G148230	Csa6G040550	Cucumber (Chinese Long) v2	cuwmbB491
Cla97C08G148230	MELO3C011580	Melon (DHL92) v3.5.1	mewmbB309
Cla97C08G148230	ClCG08G005390	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G148230	CSPI06G03270	Wild cucumber (PI 183967)	cpiwmbB517
Cla97C08G148230	Cucsa.365280	Cucumber (Gy14) v1	cgywmbB630
Cla97C08G148230	CmaCh04G023480	Cucurbita maxima (Rimu)	cmawmbB786
Cla97C08G148230	CmaCh15G006940	Cucurbita maxima (Rimu)	cmawmbB319
Cla97C08G148230	CmoCh04G024570	Cucurbita moschata (Rifu)	cmowmbB760
Cla97C08G148230	CmoCh15G007100	Cucurbita moschata (Rifu)	cmowmbB302
Cla97C08G148230	Lsi08G004110	Bottle gourd (USVL1VR-Ls)	lsiwmbB445
Cla97C08G148230	CsGy6G003290	Cucumber (Gy14) v2	cgybwmbB467
Cla97C08G148230	Carg24454	Silver-seed gourd	carwmbB0469
Cla97C08G148230	Carg01515	Silver-seed gourd	carwmbB0862
Cla97C08G148230	CsaV3_6G003570	Cucumber (Chinese Long) v3	cucwmbB509
Cla97C08G148230	Bhi04G001555	Wax gourd	wgowmbB317

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C08G148230	Melon (DHL92) v3.6.1	medwmbB297
Cla97C08G148230	Watermelon (97103) v1	wmwmbB102