CmoCh04G024570 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G024570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Glycine-rich protein
Location	Cmo_Chr04 : 18176795 .. 18179658 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGAATATCGCTCTCTTTCTCTTCGACTCCGAGAAGGCTCTGGAAAGTCTCCCATGGCGTACGTTGAACGAGGTTCTCTCTCGGTTTCTAATCTGTTATTTTTCGATTCCGCTTCTGAGAGTTTGGTTGATGACTTTCGGATTTGGAAACATTTTAGAGTTTTTGTGTGTTTGGATTGTCTGTGTATTTATTTTTTAATCCTGTTCCTATTTCCGTGGTAATATTCATTTTGTGGTGATTCTGATTTCGATTTTGTGCTCAGTAGGTTAGATCTAGTTGGTTTTTCAGGAAGACGTGGTATTCTGTGAGAATTTGATCTGATTGCATATCTCTTGACCGGAAACTTAATGAATTTGATGTTATCAAATGGAAAAATCGTACACAAAGATATAACCACAGGAATGGAAATAATCCTAGGGCATTGATTTAATCATGAAGAGGGGGAAAACTCTCGAATTCGAGTTAGAAAGAGACTGAGGTTCTGCGATCTAGTGGAATGATATTAGAAAGAGACTGAGGTTCTACGATCTAGTGGAATGATAGGAAAAATAGAGAAATGTGGTAGATAAATTCGGAAAATTTATAGTCGTTTGATAACTTAGATGAGACACATAGCTTGACAATTTTTGTATGAGTTTATATCCTAACCTTCAACTTCAACTTTGATGGTACCTTTTTTATAAGCTGATATGAAGGCATTTGTTTATTTCTTTGAGTGTTTGGATGAATTCACACCGTTTTCCTAATTTTTCAACTCTAGTTCTACTCCGTGTTTATTGTCTGTCTCTACGGTTTTAGTGGATAGAACCGATGATGAAAAAGGCCTGGAAAATGGCTATGCTTATTGACTTCTTCAGGCAGAACTTATACCATTCGCTTTAAGGGGATCTTTTTTGCTTTTCCTTGTAAATTGCACCTGCTTAATATAAAATTTAAAAATGTATTATAAGATGGTAGTTCATAATGGTAGACGCAAGTATCAGTGGTTTGAAAATATGGTGAAGGAATCGATATATTTTCTTTTAAATTTGATTTAGTTGCTTTATGTTAGTCAGGCTCCGTTGTGTTAATGCTTAATGTTTGAAGCCATGTTATAAACCTTATGGAGGTTCTTCGTGTCTTCTTATTAAATTTTGTGAAATCATCACAATTTCAAGCAGTAGAGAGAGAAGATATTATGATTTTTAAATCTTCACGAGCTTATAATTTTGTTATTCTATATTGCTGTTGATCTGAATCATTGTGCTAACATATATATATTTCCATGGTTTGGAAGTTTTTCTGCACTCTCTTCGAGTGCTGGACAAGGCTTGAAGTCATATTGATTTTTTTTAATGAACCTTTAAAAGTGTGTGCAACCTGAGAACACTATCAGGAATCTTTTGATTGTATCAATGCGTGCTTGAAATTCCGTTTGGTTGTTCCGTTTAGCAGGATTCTCTAGAACCATTTCTGGATAAGTGAATATTGCATGTACCAAATATTTAGGTAGAACTTGTTTTTGGAATTCCTTTTAGTTTCTTCTTTCTGGTGAACTCTCTCATATTAAGTCATGGGGGATGTTCATGTTTCCGAAGCATAAATTGATACTAAATTTGCCAGTATTAAACAGCTCTCTGCGAATCCCTATTGCACTCTGCTACCTGTCTCCTGGTACATCAGTTTTACATCTTTGTCAGAGTACTTAGAACGGCAAGATTATTGGGGAGCTAGTCAGCTCTGTGTTCCTTGCATGACTTCATTATTGGTGAACTCTTTCATATTAAACAGCTCTGTGTTCCTTTCCTTTTTCAGTTTCACCTGCTTTGCATGACTTCATTAATGATCTCGTTCACCTCTTCTCTATGTACAGTTGTCCGTATGATACTGTTTTTTTTTTGTTTTCTATTTGGATTGATTTATGTTCAAGAGATTGAAGAGATGCTAAAATTGCTTTCACATTGCACAATGACCCATTTTTTCCGATTCGTATATCCGGTTGATAAACTGTGTGCTATTCCCAGGTGGATTTGACATGTTACCATTCATCTGATAGTTTCTTTGAACTATGAAATTGAGTATTTCTGTGCTCTTGATTCCTAGCATGTAATAACCAGCTATACACTTGCATGATATCTTGTAGGCGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACCATAACTGATTTCTTTTGGGCCATTGTAAACATTATCGGTGTGTTTTTTACCACCTTATTCTCGGTAAGGTGTTCTTTGTTGTCTTGTGAATAATGTTAGGTATTCAGAACCATTATCATAGGATTAAAGATTAACTTTCATGCTTCTTTCTAGATGGAAAAATCTGAGGCTTATAGAAAAGGATCTGGTTCTGGCAAGAAATGGGACGGTGGTGGCCCAGGAGGTCCCGGGTCAGGGCCTTATGGTGGTCGTCCACGTGGGCCACCTCGTGGTCTAGACAACGTTCGAGGGATCGATCATAGTAAGTTCAATGCTTGTTTTCGAACTTTTTTCCTCTATTCTTTCATTCAATTTACTTACTGTTCTGTGATCTGAACTATGACAACCAGGTTCACTACCTGCCTGTGGCTCGTGCTGCGGCTAAGCTTTTGGCTGCTTCCATGGTGCATTTACACAAGGGTGTCTACAAAATACTCTTCAATTTAAAATCGTGGGCCGTGTTGTAAATGTTGATGGAATGCTATCTGCGAATATAAATTAGTTCATTAGATAAAATAAAAAAAAGGGTTCTCACTGATGTGGTTTCATAAATTAGTACTCAAAGTTAATTTTGCCAATCAAAATGTGTAGTGTTTGGATAAAATTTTAAGATGCCAAAGCATTTTTAATATATTATCTTGCAATGATTTCTTGTACTAA

mRNA sequence

TTTAGAATATCGCTCTCTTTCTCTTCGACTCCGAGAAGGCTCTGGAAAGTCTCCCATGGCGTACGTTGAACGAGGCGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACCATAACTGATTTCTTTTGGGCCATTGTAAACATTATCGGTGTGTTTTTTACCACCTTATTCTCGATGGAAAAATCTGAGGCTTATAGAAAAGGATCTGGTTCTGGCAAGAAATGGGACGGTGGTGGCCCAGGAGGTCCCGGGTCAGGGCCTTATGGTGGTCGTCCACGTGGGCCACCTCGTGGTCTAGACAACGTTCGAGGGATCGATCATAGTTCACTACCTGCCTGTGGCTCGTGCTGCGGCTAAGCTTTTGGCTGCTTCCATGGTGCATTTACACAAGGGTGTCTACAAAATACTCTTCAATTTAAAATCGTGGGCCGTGTTGTAAATGTTGATGGAATGCTATCTGCGAATATAAATTAGTTCATTAGATAAAATAAAAAAAAGGGTTCTCACTGATGTGGTTTCATAAATTAGTACTCAAAGTTAATTTTGCCAATCAAAATGTGTAGTGTTTGGATAAAATTTTAAGATGCCAAAGCATTTTTAATATATTATCTTGCAATGATTTCTTGTACTAA

Coding sequence (CDS)

ATGGCGTACGTTGAACGAGGCGTTGTGAAATCCCAGAGATCATTTTGGCGTCTCAAAACCATAACTGATTTCTTTTGGGCCATTGTAAACATTATCGGTGTGTTTTTTACCACCTTATTCTCGATGGAAAAATCTGAGGCTTATAGAAAAGGATCTGGTTCTGGCAAGAAATGGGACGGTGGTGGCCCAGGAGGTCCCGGGTCAGGGCCTTATGGTGGTCGTCCACGTGGGCCACCTCGTGGTCTAGACAACGTTCGAGGGATCGATCATAGTTCACTACCTGCCTGTGGCTCGTGCTGCGGCTAA

Homology

[Close]

BLAST of CmoCh04G024570 vs. TrEMBL
Match: A0A0A0KDW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040550 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. TrEMBL
Match: M5XZ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013824mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.1e-47
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS+RS WRLKTITDFFWAIVN+IGVFF T+FSMEKS+AYRKG  SGKKWDG
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNLIGVFFATMFSMEKSDAYRKGLASGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPG GPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGGGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. TrEMBL
Match: A5CA43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015657 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-45
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS RS WRL+TITDFFWAIVN IGVFF T+FSMEKS+AYRK SGSGKKWDG
Sbjct: 1   MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPG GPYGG PRGPPRGLDNVRGIDHS+LPACGSCCG
Sbjct: 61  GGPGGPGRGPYGGGPRGPPRGLDNVRGIDHSALPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. TrEMBL
Match: A9PDX9_POPTR (Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0005s15960g PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.4e-45
Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRS WRL+TITDFFWAIVN IGVFF+T+FSMEK++AYRKGSGS KKWDG
Sbjct: 1   MAYVERGVVKSQRSIWRLRTITDFFWAIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
            GPGGPGSGPYGG PRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  -GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100

[Close]

BLAST of CmoCh04G024570 vs. TrEMBL
Match: B9GUD9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08710g PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-44
Identity = 89/101 (88.12%), Postives = 97/101 (96.04%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGV+KS+RS WRL+TITDFFWAIVN+IGVFF+T+FSMEK++AYRKGSGS KKWDG
Sbjct: 57  MAYVERGVLKSKRSIWRLRTITDFFWAIVNLIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 116

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
            GPGGPGSGPYGG PRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 117 -GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 156

[Close]

BLAST of CmoCh04G024570 vs. TAIR10
Match: AT4G08230.1 (AT4G08230.1 glycine-rich protein)

HSP 1 Score: 127.9 bits (320), Expect = 3.6e-30
Identity = 72/113 (63.72%), Postives = 82/113 (72.57%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKW-- 60
           MAYVE GVVK++R  WRL+TI DFF +I+N+I VFF T+FSMEKS+AYRKGS   KKW  
Sbjct: 1   MAYVEGGVVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGG 60

Query: 61  ---DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG 102
               GGG GG   G  GGR  GPPR GLDNVRG+      DH+SLPACGSCCG
Sbjct: 61  GMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGADHNSLPACGSCCG 113

[Close]

BLAST of CmoCh04G024570 vs. NCBI nr
Match: gi|449446207|ref|XP_004140863.1| (PREDICTED: selenoprotein K [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 5.9e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAIVN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. NCBI nr
Match: gi|659089743|ref|XP_008445670.1| (PREDICTED: selenoprotein K [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 5.9e-51
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKSQRSFWRLKTITDFFWAI+NIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. NCBI nr
Match: gi|596288663|ref|XP_007225974.1| (hypothetical protein PRUPE_ppa013824mg [Prunus persica])

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS+RS WRLKTITDFFWAIVN+IGVFF T+FSMEKS+AYRKG  SGKKWDG
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNLIGVFFATMFSMEKSDAYRKGLASGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPG GPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGGGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. NCBI nr
Match: gi|470109096|ref|XP_004290838.1| (PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca])

HSP 1 Score: 192.6 bits (488), Expect = 3.4e-46
Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS+RS WRLKTITDFFWAIVN+IGVFF T+FSMEKS+AYRKGSG+ KKWDG
Sbjct: 1   MAYVERGVVKSKRSIWRLKTITDFFWAIVNLIGVFFATMFSMEKSDAYRKGSGASKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPG GPYGG PRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGGGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CmoCh04G024570 vs. NCBI nr
Match: gi|225459495|ref|XP_002285840.1| (PREDICTED: selenoprotein K [Vitis vinifera])

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-45
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 1


Query: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60
           MAYVERGVVKS RS WRL+TITDFFWAIVN IGVFF T+FSMEKS+AYRK SGSGKKWDG
Sbjct: 1   MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60

Query: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102
           GGPGGPG GPYGG PRGPPRGLDNVRGIDHS+LPACGSCCG
Sbjct: 61  GGPGGPGRGPYGGGPRGPPRGLDNVRGIDHSALPACGSCCG 101

The following BLAST results are available for this feature:

BLAST of CmoCh04G024570 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G024570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDW6_CUCSA	4.1e-51	99.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G040550 PE=4 SV=1	[more]
M5XZ42_PRUPE	8.1e-47	91.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013824mg PE=4 SV=1	[more]
A5CA43_VITVI	1.5e-45	89.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015657 PE=4 SV=1	[more]
A9PDX9_POPTR	4.4e-45	90.10	Glycine-rich family protein OS=Populus trichocarpa GN=POPTR_0005s15960g PE=2 SV=...	[more]
B9GUD9_POPTR	1.7e-44	88.12	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08710g PE=4 SV=1	[more]

BLAST of CmoCh04G024570 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08230.1	3.6e-30	63.72	glycine-rich protein	[more]

BLAST of CmoCh04G024570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446207\|ref\|XP_004140863.1\|	5.9e-51	99.01	PREDICTED: selenoprotein K [Cucumis sativus]	[more]
gi\|659089743\|ref\|XP_008445670.1\|	5.9e-51	99.01	PREDICTED: selenoprotein K [Cucumis melo]	[more]
gi\|596288663\|ref\|XP_007225974.1\|	1.2e-46	91.09	hypothetical protein PRUPE_ppa013824mg [Prunus persica]	[more]
gi\|470109096\|ref\|XP_004290838.1\|	3.4e-46	90.10	PREDICTED: selenoprotein K [Fragaria vesca subsp. vesca]	[more]
gi\|225459495\|ref\|XP_002285840.1\|	2.2e-45	89.11	PREDICTED: selenoprotein K [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024491	Se_SelK/SelG

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006984	ER-nucleus signaling pathway
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0006457	protein folding
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0051716	cellular response to stimulus
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024570.1	CmoCh04G024570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024491	Selenoprotein SelK/SelG	PFAM	PF10961	DUF2763	coord: 2..80 score: 5.5
None	No IPR available	PRODOM	PD353114		coord: 1..49 score: 1.
None	No IPR available	PANTHER	PTHR16875	FAMILY NOT NAMED	coord: 2..101 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G024570	Cucsa.365280	Cucumber (Gy14) v1	cgycmoB1006
CmoCh04G024570	CmaCh15G006940	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G024570	CmaCh04G023480	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G024570	Csa6G040550	Cucumber (Chinese Long) v2	cmocuB757
CmoCh04G024570	ClCG08G005390	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G024570	CSPI06G03270	Wild cucumber (PI 183967)	cmocpiB766
CmoCh04G024570	Lsi08G004110	Bottle gourd (USVL1VR-Ls)	cmolsiB697
CmoCh04G024570	Cp4.1LG01g20510	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G024570	CsaV3_6G003570	Cucumber (Chinese Long) v3	cmocucB0897
CmoCh04G024570	Cla97C08G148230	Watermelon (97103) v2	cmowmbB760
CmoCh04G024570	Bhi04G001555	Wax gourd	cmowgoB0863
CmoCh04G024570	Carg24454	Silver-seed gourd	carcmoB0604
CmoCh04G024570	Carg01515	Silver-seed gourd	carcmoB1121

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G024570	CmoCh15G007100	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G024570	Cucurbita moschata (Rifu)	cmocmoB030
CmoCh04G024570	Cucurbita moschata (Rifu)	cmocmoB366
CmoCh04G024570	Cucurbita maxima (Rimu)	cmacmoB059
CmoCh04G024570	Cucurbita maxima (Rimu)	cmacmoB482
CmoCh04G024570	Wild cucumber (PI 183967)	cmocpiB718
CmoCh04G024570	Cucumber (Chinese Long) v2	cmocuB708
CmoCh04G024570	Melon (DHL92) v3.5.1	cmomeB698
CmoCh04G024570	Watermelon (Charleston Gray)	cmowcgB626
CmoCh04G024570	Watermelon (97103) v1	cmowmB726
CmoCh04G024570	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G024570	Cucurbita pepo (Zucchini)	cmocpeB697
CmoCh04G024570	Cucurbita pepo (Zucchini)	cmocpeB709
CmoCh04G024570	Bottle gourd (USVL1VR-Ls)	cmolsiB664
CmoCh04G024570	Cucumber (Gy14) v2	cgybcmoB523
CmoCh04G024570	Melon (DHL92) v3.6.1	cmomedB792
CmoCh04G024570	Silver-seed gourd	carcmoB0926
CmoCh04G024570	Cucumber (Chinese Long) v3	cmocucB0835
CmoCh04G024570	Watermelon (97103) v2	cmowmbB701
CmoCh04G024570	Wax gourd	cmowgoB0865
CmoCh04G024570	Wax gourd	cmowgoB0915