CmoCh14G003840 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G003840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box protein
LocationCmo_Chr14 : 1781322 .. 1782506 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCGACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCCCCGACCCAACTCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGCTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCCGAAACTTGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTGAGTTTAGCGAACCGGCGGCGGCGCGGAATGAGCTGTGGGTAATGGAGGATTACAAGGAAAGGGTTTGGACCAAAAAGTGGGAATTTTTGGTGTCGAATCCGACGGCTGTGTATGGATCAGATACTTTGATGGCGATGGAAAATAATGAAAAAGTGAAGTTTTGTAATGTGGAGACAGGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTGAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA

mRNA sequence

ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCGACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCCCCGACCCAACTCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGCTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCCGAAACTTGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTGAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA

Coding sequence (CDS)

ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCGACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCCCCGACCCAACTCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGCTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCCGAAACTTGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTGAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA
Homology
[Close]
BLAST of CmoCh14G003840 vs. Swiss-Prot
Match: FB341_ARATH (F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-10
Identity = 68/257 (26.46%), Postives = 116/257 (45.14%), Query Frame = 1 

Query: 4   PDDVILDILSRLPFDAVGKIRALSKS----HNQATYTSYFKALAAGHQPLLLGFLLQSLR 63
           PD+VIL IL+RLP  ++ + +++ KS     +   +TS F  L+   Q L+      S  
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSL 69

Query: 64  TTATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLY 123
                 R V             ELSL F+  +    + V+ NGL+   S      ++ +Y
Sbjct: 70  ICVDNLRGV------------SELSLDFVRDRVR--IRVSSNGLLCCSS----IPEKGVY 129

Query: 124 TICKLPTKQWQRIP----IPKTRFFTLNIAMYVTRSNPL---HFKIIRLCRDTTFSKR-R 183
            +C   T++++++P     P TRF+    A  V  +  L    F ++      +F +R  
Sbjct: 130 YVCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPD 189

Query: 184 RSFCYTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFD 243
            SF   +C +FDSES +W++   ++ + S + +    V V V G+ HW       ILA D
Sbjct: 190 GSF---ICLVFDSESNKWRKFVSVLEECSFTHMSKNQV-VFVNGMLHWLMSGLCYILALD 244

Query: 244 FLSETWSSFAAPEAITV 249
              + W   + P+ I +
Sbjct: 250 VEHDVWRKISLPDEIRI 244

[Close]
BLAST of CmoCh14G003840 vs. Swiss-Prot
Match: FB279_ARATH (F-box protein At5g41720 OS=Arabidopsis thaliana GN=At5g41720 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.0e-07
Identity = 52/178 (29.21%), Postives = 82/178 (46.07%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           DV+L+I+S  P   + K R LSK  N+ +Y   F           LG++    +     R
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFLGYIFY-YKDNKWFR 69

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAP--NGLVL-FQSRHRTRHQRQLYTIC 125
            H   F +         ++L+FLP      +      +G++L      + R +   Y +C
Sbjct: 70  NHSC-FVSGVDEKDKNRINLAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYIVC 129

Query: 126 KLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 181
           K  TKQ++ IP PKTRF T+   + V  SNP  +KIIR+    T+++  R   Y + E
Sbjct: 130 KPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRV--SDTWARVGRDGVYNLRE 183

[Close]
BLAST of CmoCh14G003840 vs. TrEMBL
Match: A0A0A0LBP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785420 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 9.8e-73
Identity = 170/396 (42.93%), Postives = 226/396 (57.07%), Query Frame = 1 

Query: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLL-GFLLQSLR 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60

Query: 61  TTATGRRHVLSFATPRPNSP--PLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRH-QR 120
                  +++SF +P  +SP  PL LSLSFLPG  P++ AVAPNGL+L +S+H  RH +R
Sbjct: 61  PVPKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120

Query: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180

Query: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240

Query: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIRNY---------- 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++R +          
Sbjct: 241 DTWSKIAMPETI-VNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300

Query: 301 --------------SYRQLEPTHYYGSVLKV----------------------------- 327
                          + +L PT  YGS + V                             
Sbjct: 301 ELWVMHKKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWH 360

[Close]
BLAST of CmoCh14G003840 vs. TrEMBL
Match: V4U5Z5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007128mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 103/283 (36.40%), Postives = 149/283 (52.65%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D++ +ILSR     VG+ R +SK  N  TY SYF  L       + GFLL S+ +     
Sbjct: 9   DILSEILSRATLQTVGRCRLVSKECNDLTYRSYFMHLHCQRTRTISGFLLASMMS----H 68

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTICKLP 125
           +H   F +   N P + +SL FLPG   ++LA    GL+L  +     H+   Y +CK  
Sbjct: 69  KHPAEFVSTDNNIPNI-VSLRFLPG-CARILACTNQGLLLCLNSRPKCHRIPEYYVCKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYT---VCELF 185
           TK+WQ+IP PKTR+F  N+AM V R +PL +KIIRL   +      R   Y     CE+F
Sbjct: 129 TKEWQQIPNPKTRYFARNVAMMVLRLDPLRYKIIRLSEPSHLRNLNRKHAYEHCFCCEVF 188

Query: 186 DSESWRWKRLEDLV--HDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 245
           DSE W W++LE++   +D  L+  +P   A+   G  HW    EK+ILAF+   ETW+  
Sbjct: 189 DSERWAWRQLEEMYFPYDEVLT-SKP---AISACGAFHW-LTSEKNILAFNADDETWTML 248

Query: 246 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIRNYSYRQ 284
           + P+A+             KS++ +L  Y+GKL  +R    R+
Sbjct: 249 SVPDAVN-----------NKSYYLQLAGYQGKLACLRKERGRE 269

[Close]
BLAST of CmoCh14G003840 vs. TrEMBL
Match: U5FZE9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s23130g PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.4e-32
Identity = 97/276 (35.14%), Postives = 145/276 (52.54%), Query Frame = 1 

Query: 2   ELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTT 61
           +   D+I +IL+R   + VG+ R LSK  N  TY S F  L +     + G+ +QS+ + 
Sbjct: 5   DFSSDIIYEILTRSSMETVGRCRLLSKECNSITYDSIFTNLHSHRTNTISGYFMQSMMSN 64

Query: 62  ATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTI 121
                 V   +T   + P  +LSL+FLP +  ++      G++L     RT H R  Y +
Sbjct: 65  RFYSSFVSIDSTTWRSYP--KLSLNFLPDRV-EIQGSTNQGILLC----RTHHPR--YYV 124

Query: 122 CKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY--TVC 181
           CK  TKQW+RIP PKTR+ T+   M V RSNPLH+KI R  +  T    +  F Y    C
Sbjct: 125 CKPTTKQWRRIPNPKTRYHTIATGMIVIRSNPLHYKIARFSQPKTRCHDKEFFQYYWVRC 184

Query: 182 ELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSS 241
           ELFDS++W WK+L+++   N  S       AV V G  HW  + E +I AF    E++S 
Sbjct: 185 ELFDSKTWTWKQLDEVKLQNHESLSRK--PAVSVSGSLHWLTWVENNIFAFHVSKESYSM 244

Query: 242 FAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGL 276
           F+ P +++ + + ++          +LVEY GKL +
Sbjct: 245 FSLPLSVSHDNKGKD---------IELVEYMGKLAV 260

[Close]
BLAST of CmoCh14G003840 vs. TrEMBL
Match: B9HLJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s03790g PE=4 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 7.8e-30
Identity = 101/301 (33.55%), Postives = 145/301 (48.17%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D+I +IL+R   + V K R LSK  N+ TY S F    +    ++ GF +QS+       
Sbjct: 10  DIIFEILTRSSMETVEKCRLLSKECNKITYESTFTNHHSQRTNIISGFFIQSM----IRN 69

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTICKLP 125
           +   SF +     P  +LSL+FLP    +++     GL+L Q+ HR +     Y +CK  
Sbjct: 70  KFYSSFVSVDTLKPYPKLSLNFLPASI-EIVTSTNQGLLLCQTHHRPQ-----YYVCKPT 129

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY--TVCELFD 185
           TKQWQ IP PK R+ TL  +M V  SNPLH+KI+R     T  + +  + Y    CELFD
Sbjct: 130 TKQWQIIPNPKMRYQTLETSMIVIGSNPLHYKIVRFSEPKTRYQDKEFYRYHWVRCELFD 189

Query: 186 SESWRWKRLEDLVHDNSLSFVEPFC--VAVVVGGLAHWQFFDEKSILAFDFLSETWSSFA 245
           S++W+WK+LE++     L   E       V V G  HW  +    I AF    E++S F+
Sbjct: 190 SKTWKWKQLEEV----KLPQTELLSRNTNVSVNGSLHWLTWKRNDIFAFHVNKESYSMFS 249

Query: 246 APEAITVEQEARERTEPFKSWHTKLVEYKGKLGL--------------IRNYSYRQLEPT 289
            P  +         +E  KS    LV YKGKL +              + NY  ++   T
Sbjct: 250 LPLPV---------SEDNKSKDIALVRYKGKLAITSIGREDSFMELWVMENYDRKEWNKT 287

[Close]
BLAST of CmoCh14G003840 vs. TrEMBL
Match: A0A061GMD8_THECC (F-box associated ubiquitination effector family protein, putative OS=Theobroma cacao GN=TCM_037569 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.6e-28
Identity = 97/288 (33.68%), Postives = 148/288 (51.39%), Query Frame = 1 

Query: 2   ELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTT 61
           +L  DV+ +ILSR+P   + + R LS+  N  TY S F  L       + G+ +Q   T+
Sbjct: 5   DLSSDVMFEILSRMPLKMLRRCRLLSRECNSLTYESSFMRLHCQRTNTIAGYFIQ---TS 64

Query: 62  ATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTI 121
              R +    +   P     +L+L FLP +T  + A A  GL+L +S+   R Q + Y +
Sbjct: 65  KKSRGYSTFCSIDNPGVASDQLTLDFLP-ETVHIRATADQGLMLCESQ---RSQNRYY-V 124

Query: 122 CKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLC--------RDTTFSK-RRR 181
           CK  T+QW+ IP P  R+FT   AM V  S+PL FK++RL          ++ +S+    
Sbjct: 125 CKPGTRQWETIPNPNPRYFTCKTAMLVIGSDPLRFKLVRLSDPEPKEAELESEYSEPELD 184

Query: 182 SFCYTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCV--AVVVGGLAHW--QFFDEKSIL 241
           ++    CE+FDSE W WK+L+D++    LS+ E F +  A+   G  HW     D+K+IL
Sbjct: 185 NYRRYPCEIFDSEIWAWKQLDDVM----LSYDEFFDLGHAISAYGGLHWLTSTGDKKNIL 244

Query: 242 AFDFLSETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLI 277
           +F+   E+W S + PE+                +H  L EY+GKL LI
Sbjct: 245 SFNEDKESWESVSLPESFCHGDHC---------YHVNLAEYEGKLALI 271

[Close]
BLAST of CmoCh14G003840 vs. TAIR10
Match: AT1G64295.1 (AT1G64295.1 F-box associated ubiquitination effector family protein)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-22
Identity = 83/286 (29.02%), Postives = 134/286 (46.85%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D I ++LS L    +GK+R ++K  N+ +Y S+F  L       + G+ L+       G 
Sbjct: 9   DTIQEVLSYLRGSEIGKLRLINKECNKRSYESWFVNLNLHRTNNISGYFLERYER---GY 68

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAV-APNGLVLFQSRHRTRHQRQLYTICKL 125
           +   SF   R +     +S+ FLP    ++ A  A +G++L  +  R   +   Y +CK 
Sbjct: 69  KLDTSFFHERRDLDNKGVSIDFLPQGEVKIKACDARHGILLCYNDTRPIPE---YIVCKP 128

Query: 126 PTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCELFDS 185
            TKQ+Q IP PK R    ++ + VT   P  +KI RL +    ++  R+F    CE+FDS
Sbjct: 129 TTKQYQIIPNPKVRSCDKSLGLTVTGLQPFRYKIFRLSKSPGMTRNLRTFA---CEVFDS 188

Query: 186 ESWRWKRLED--LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSFAA 245
           +S+ WKRL++  L   + L    P    V   G  HW+ ++  +++     +ETWS    
Sbjct: 189 DSFMWKRLKNLRLPRTDGLILSNP----VQASGFLHWRSWNH-NVIRLCPKTETWSFLHT 248

Query: 246 PEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIRNYSYRQLEPTH 289
           P                     +LV Y+GKLG+IR++     E  H
Sbjct: 249 PNV---------------GLFPELVSYEGKLGVIRHWINNNQEDVH 265

[Close]
BLAST of CmoCh14G003840 vs. TAIR10
Match: AT1G64290.1 (AT1G64290.1 F-box protein-related)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21
Identity = 84/289 (29.07%), Postives = 133/289 (46.02%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D+I + LS LP   +GK R L+K  N+ +Y S+F  L       + G+ +Q       G 
Sbjct: 9   DMIQEFLSYLPASKIGKFRLLNKECNKRSYESWFVNLNLLRTNRISGYFIQHY--IVKGH 68

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTICKLP 125
               SF   R +     +S+ FLP    ++ A   +  +L   ++ T+  R  Y + K  
Sbjct: 69  ELRTSFVHERSDLQNNGVSIDFLPPGMIKIEACDASHGILLCVKY-TKPSRG-YIVFKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYT----VCEL 185
           TKQ+Q IP P+ + + +++ + V   NP  +KI RL +       R  +       +CE+
Sbjct: 129 TKQYQVIPKPEVKGWDMSLGLAVIGLNPFRYKIQRLSQSRRMCMSRGIYHLNHRTFMCEV 188

Query: 186 FDSESWRWKRLED--LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSS 245
           FDS+S+ WKRLE+  L   + L F  P    + V G  HW      +++ F   +ETWS 
Sbjct: 189 FDSDSFTWKRLENLRLPKTDRLIFSNP----IQVSGFLHW-ISRNNNVIRFCLKTETWSF 248

Query: 246 FAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIRNYSYRQLEPTH 289
           F  P +                  + LV Y+GKLG IR ++ +  E  H
Sbjct: 249 FHTPNS---------------DVFSGLVRYEGKLGAIRQWTNKDQEDVH 273

[Close]
BLAST of CmoCh14G003840 vs. TAIR10
Match: AT5G49610.1 (AT5G49610.1 F-box family protein)

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-11
Identity = 68/257 (26.46%), Postives = 116/257 (45.14%), Query Frame = 1 

Query: 4   PDDVILDILSRLPFDAVGKIRALSKS----HNQATYTSYFKALAAGHQPLLLGFLLQSLR 63
           PD+VIL IL+RLP  ++ + +++ KS     +   +TS F  L+   Q L+      S  
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSL 69

Query: 64  TTATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLY 123
                 R V             ELSL F+  +    + V+ NGL+   S      ++ +Y
Sbjct: 70  ICVDNLRGV------------SELSLDFVRDRVR--IRVSSNGLLCCSS----IPEKGVY 129

Query: 124 TICKLPTKQWQRIP----IPKTRFFTLNIAMYVTRSNPL---HFKIIRLCRDTTFSKR-R 183
            +C   T++++++P     P TRF+    A  V  +  L    F ++      +F +R  
Sbjct: 130 YVCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPD 189

Query: 184 RSFCYTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFD 243
            SF   +C +FDSES +W++   ++ + S + +    V V V G+ HW       ILA D
Sbjct: 190 GSF---ICLVFDSESNKWRKFVSVLEECSFTHMSKNQV-VFVNGMLHWLMSGLCYILALD 244

Query: 244 FLSETWSSFAAPEAITV 249
              + W   + P+ I +
Sbjct: 250 VEHDVWRKISLPDEIRI 244

[Close]
BLAST of CmoCh14G003840 vs. TAIR10
Match: AT5G41720.1 (AT5G41720.1 BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1))

HSP 1 Score: 56.6 bits (135), Expect = 3.4e-08
Identity = 52/178 (29.21%), Postives = 82/178 (46.07%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           DV+L+I+S  P   + K R LSK  N+ +Y   F           LG++    +     R
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFLGYIFY-YKDNKWFR 69

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAP--NGLVL-FQSRHRTRHQRQLYTIC 125
            H   F +         ++L+FLP      +      +G++L      + R +   Y +C
Sbjct: 70  NHSC-FVSGVDEKDKNRINLAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYIVC 129

Query: 126 KLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 181
           K  TKQ++ IP PKTRF T+   + V  SNP  +KIIR+    T+++  R   Y + E
Sbjct: 130 KPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRV--SDTWARVGRDGVYNLRE 183

[Close]
BLAST of CmoCh14G003840 vs. NCBI nr
Match: gi|659085782|ref|XP_008443600.1| (PREDICTED: uncharacterized protein LOC103487156 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 5.0e-78
Identity = 178/393 (45.29%), Postives = 236/393 (60.05%), Query Frame = 1 

Query: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGH--QPLLLGFLLQSL 60
           M+LPDDVIL+IL R   +  GKI+ LSK +N+ +Y+  +K L + +  QP+L GFLLQS 
Sbjct: 1   MDLPDDVILEILIRFSLNQAGKIQTLSKFYNKTSYSFCYKTLISENHSQPILDGFLLQSP 60

Query: 61  RTTATGRRHVLSFATPRPN--SPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQR 120
           ++ +    H+LSF +P PN  SPPL LSL+FLPG  PQ+ AVAPNGL+L +++H  RH +
Sbjct: 61  KSKSNA--HLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNK 120

Query: 121 QL-YTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFC 180
           +L YTI KL T+QW+ +PIPKTR+FT NIAMYV RSNPLHFKI+RL  D   SKR   FC
Sbjct: 121 RLIYTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFC 180

Query: 181 YTVCELFDSESWRWKRLEDLVH--DNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFL 240
           YT+CE+FDSESWRWK+L+D+VH       +V+     V   GLAHW+F D+ SI AFDF 
Sbjct: 181 YTICEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFY 240

Query: 241 SETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIR---------------N 300
           SETWS  A PE I V  +    +  F+ WH +LVEY+GKLG++R               N
Sbjct: 241 SETWSKIAMPETI-VNDKNNSSSSHFQRWHIELVEYEGKLGVVREFHKPTVFTELWVMEN 300

Query: 301 YSYRQL----------EPTHYYGSVLKVF---------PFS------------------- 327
           Y  +++           PT +YGS +++           FS                   
Sbjct: 301 YGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSEQSHRHL 360

[Close]
BLAST of CmoCh14G003840 vs. NCBI nr
Match: gi|449437890|ref|XP_004136723.1| (PREDICTED: F-box protein At5g49610 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72
Identity = 170/396 (42.93%), Postives = 226/396 (57.07%), Query Frame = 1 

Query: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLL-GFLLQSLR 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60

Query: 61  TTATGRRHVLSFATPRPNSP--PLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRH-QR 120
                  +++SF +P  +SP  PL LSLSFLPG  P++ AVAPNGL+L +S+H  RH +R
Sbjct: 61  PVPKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120

Query: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180

Query: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240

Query: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIRNY---------- 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++R +          
Sbjct: 241 DTWSKIAMPETI-VNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300

Query: 301 --------------SYRQLEPTHYYGSVLKV----------------------------- 327
                          + +L PT  YGS + V                             
Sbjct: 301 ELWVMHKKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWH 360

[Close]
BLAST of CmoCh14G003840 vs. NCBI nr
Match: gi|567857402|ref|XP_006421384.1| (hypothetical protein CICLE_v10007128mg [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 2.0e-34
Identity = 103/283 (36.40%), Postives = 149/283 (52.65%), Query Frame = 1 

Query: 6   DVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D++ +ILSR     VG+ R +SK  N  TY SYF  L       + GFLL S+ +     
Sbjct: 9   DILSEILSRATLQTVGRCRLVSKECNDLTYRSYFMHLHCQRTRTISGFLLASMMS----H 68

Query: 66  RHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTICKLP 125
           +H   F +   N P + +SL FLPG   ++LA    GL+L  +     H+   Y +CK  
Sbjct: 69  KHPAEFVSTDNNIPNI-VSLRFLPG-CARILACTNQGLLLCLNSRPKCHRIPEYYVCKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYT---VCELF 185
           TK+WQ+IP PKTR+F  N+AM V R +PL +KIIRL   +      R   Y     CE+F
Sbjct: 129 TKEWQQIPNPKTRYFARNVAMMVLRLDPLRYKIIRLSEPSHLRNLNRKHAYEHCFCCEVF 188

Query: 186 DSESWRWKRLEDLV--HDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 245
           DSE W W++LE++   +D  L+  +P   A+   G  HW    EK+ILAF+   ETW+  
Sbjct: 189 DSERWAWRQLEEMYFPYDEVLT-SKP---AISACGAFHW-LTSEKNILAFNADDETWTML 248

Query: 246 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIRNYSYRQ 284
           + P+A+             KS++ +L  Y+GKL  +R    R+
Sbjct: 249 SVPDAVN-----------NKSYYLQLAGYQGKLACLRKERGRE 269

[Close]
BLAST of CmoCh14G003840 vs. NCBI nr
Match: gi|743895635|ref|XP_011041088.1| (PREDICTED: F-box protein At5g03970-like [Populus euphratica])

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 101/281 (35.94%), Postives = 152/281 (54.09%), Query Frame = 1 

Query: 2   ELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTT 61
           +L  D+I +IL+R   + VG+ R LSK  N+ TY S F  L +     + G+ +QS+ + 
Sbjct: 5   DLSSDIIYEILTRSSMETVGRCRVLSKECNRITYDSIFTNLHSERTNTVSGYFMQSMMSN 64

Query: 62  ATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTI 121
                 V   AT   + P  +LSL+FLP +  ++      G++L     RT H R  Y +
Sbjct: 65  RFYSSFVSIDATTSRSYP--KLSLNFLPDRV-EIQGSTNQGILLC----RTHHPR--YYV 124

Query: 122 CKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRL------CRDTTFSKRRRSFC 181
           CK  TKQW+RIP PKTR+ +L   M V RSNPLH+KI+R       C D  F +    + 
Sbjct: 125 CKPTTKQWRRIPNPKTRYHSLATGMIVIRSNPLHYKIVRFSQPKARCHDKEFFQ----YY 184

Query: 182 YTVCELFDSESWRWKRLEDLVHDNSLSFV-EPFCVAVVVGGLAHWQFFDEKSILAFDFLS 241
           +  CELFDS++W+WK+L+++   N  S   EP   AV V G  HW  + E +I AF    
Sbjct: 185 WVRCELFDSKTWKWKQLDEVKLQNHESLSREP---AVSVSGSLHWLTWAENNIFAFHVSK 244

Query: 242 ETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGL 276
           E++S F+ P +++ + + ++          +LVEY GKL +
Sbjct: 245 ESYSIFSLPLSVSEDSKGKD---------IELVEYMGKLAV 260

[Close]
BLAST of CmoCh14G003840 vs. NCBI nr
Match: gi|566192307|ref|XP_006378771.1| (hypothetical protein POPTR_0010s23130g, partial [Populus trichocarpa])

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31
Identity = 97/276 (35.14%), Postives = 145/276 (52.54%), Query Frame = 1 

Query: 2   ELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTT 61
           +   D+I +IL+R   + VG+ R LSK  N  TY S F  L +     + G+ +QS+ + 
Sbjct: 5   DFSSDIIYEILTRSSMETVGRCRLLSKECNSITYDSIFTNLHSHRTNTISGYFMQSMMSN 64

Query: 62  ATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYTI 121
                 V   +T   + P  +LSL+FLP +  ++      G++L     RT H R  Y +
Sbjct: 65  RFYSSFVSIDSTTWRSYP--KLSLNFLPDRV-EIQGSTNQGILLC----RTHHPR--YYV 124

Query: 122 CKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY--TVC 181
           CK  TKQW+RIP PKTR+ T+   M V RSNPLH+KI R  +  T    +  F Y    C
Sbjct: 125 CKPTTKQWRRIPNPKTRYHTIATGMIVIRSNPLHYKIARFSQPKTRCHDKEFFQYYWVRC 184

Query: 182 ELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSS 241
           ELFDS++W WK+L+++   N  S       AV V G  HW  + E +I AF    E++S 
Sbjct: 185 ELFDSKTWTWKQLDEVKLQNHESLSRK--PAVSVSGSLHWLTWVENNIFAFHVSKESYSM 244

Query: 242 FAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGL 276
           F+ P +++ + + ++          +LVEY GKL +
Sbjct: 245 FSLPLSVSHDNKGKD---------IELVEYMGKLAV 260

The following BLAST results are available for this feature:
BLAST of CmoCh14G003840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB341_ARATH7.6e-1026.46F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1[more]
FB279_ARATH6.0e-0729.21F-box protein At5g41720 OS=Arabidopsis thaliana GN=At5g41720 PE=2 SV=1[more]
BLAST of CmoCh14G003840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBP1_CUCSA9.8e-7342.93Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785420 PE=4 SV=1[more]
V4U5Z5_9ROSI1.4e-3436.40Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007128mg PE=4 SV=1[more]
U5FZE9_POPTR8.4e-3235.14Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s23130g P... [more]
B9HLJ8_POPTR7.8e-3033.55Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s03790g PE=4 SV=2[more]
A0A061GMD8_THECC9.6e-2833.68F-box associated ubiquitination effector family protein, putative OS=Theobroma c... [more]
BLAST of CmoCh14G003840 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64295.15.4e-2229.02 F-box associated ubiquitination effector family protein[more]
AT1G64290.11.2e-2129.07 F-box protein-related[more]
AT5G49610.14.3e-1126.46 F-box family protein[more]
AT5G41720.13.4e-0829.21 BEST Arabidopsis thaliana protein match is: F-box protein-related (T... [more]
BLAST of CmoCh14G003840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085782|ref|XP_008443600.1|5.0e-7845.29PREDICTED: uncharacterized protein LOC103487156 [Cucumis melo][more]
gi|449437890|ref|XP_004136723.1|1.4e-7242.93PREDICTED: F-box protein At5g49610 [Cucumis sativus][more]
gi|567857402|ref|XP_006421384.1|2.0e-3436.40hypothetical protein CICLE_v10007128mg [Citrus clementina][more]
gi|743895635|ref|XP_011041088.1|2.2e-3335.94PREDICTED: F-box protein At5g03970-like [Populus euphratica][more]
gi|566192307|ref|XP_006378771.1|1.2e-3135.14hypothetical protein POPTR_0010s23130g, partial [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G003840.1CmoCh14G003840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32133FAMILY NOT NAMEDcoord: 2..277
score: 4.3
NoneNo IPR availablePANTHERPTHR32133:SF139F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEINcoord: 2..277
score: 4.3