Carg03602 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03602
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein At5g49610-like
Location	Cucurbita_argyrosperma_scaffold_006 : 943003 .. 944187 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCCACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCTCCGACCCGAATCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGGTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCAGAAACATGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTGAGTTTAGCGAACCGGCGGCGGCGCGGAATGAGCTGTGGGTAATGGAGGATTACAAGGAAAGGGTTTGGACCAAAAAGTGGGAATTTTTGGAGTCGAATCCAACGGCTGTGTATGGATCAGATACTTTGATGGCGATGGAAAATAATGAAAAAGTGAAGTTTTGTAATGTGGAGACAGGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTAAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA

mRNA sequence

ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCCACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCTCCGACCCGAATCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGGTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCAGAAACATGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTGAGTTTAGCGAACCGGCGGCGGCGCGGAATGAGCTGTGGGTAATGGAGGATTACAAGGAAAGGGTTTGGACCAAAAAGTGGGAATTTTTGGAGTCGAATCCAACGGCTGTGTATGGATCAGATACTTTGATGGCGATGGAAAATAATGAAAAAGTGAAGTTTTGTAATGTGGAGACAGGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTAAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA

Coding sequence (CDS)

ATGGAACTTCCTGACGACGTCATCCTCGATATTCTCAGCCGCTTACCCTTCCACGCCGTCGGAAAAATCCGAGCCCTCTCAAAATCCCACAACCAAGCCACCTACACTTCCTATTTCAAAGCCTTAGCCGCCGGTCACCAACCCCTCCTACTCGGCTTCCTCCTCCAAAGCCTACGAACCACCGCCACCGGGCGTAGGCACGTGCTGTCTTTCGCCACCCTCCGACCCGAATCGCCGCCGTTAGAATTATCCCTGAGCTTCCTCCCCGGCCAGACACCGCAAGTCCTAGCCGTCGGTCCCAACGGCCTCGTCTTATTCCAATCCCGCCACCGGACACGTCACCAGAGACAACTCTACACTATTTGTAAACTCCCCACAAAGCAATGGCAACGCATTCCAATTCCCAAGACGCGGTTTTTTACGTTGAATATTGCCATGTACGTCACGCGTTCGAATCCTCTCCACTTCAAAATCATCCGTTTATGCCGTGATACAACCTTCTCGAAACGACGTCGTTCGTTTTGCTACACCGTTTGCGAGCTTTTTGATTCCGAGTCTTGGCGGTGGAAGCGGCTTGAGGATTTAGTTCATGACAATAGCTTAAGCTTTGTCGAGCCGTTTTGTGTGGCTGTGGTCGTTGGTGGGTTAGCTCATTGGCAATTCTTTGACGAGAAGTCTATACTTGCGTTCGACTTCCTCTCAGAAACATGGTCGAGTTTCGCCGCGCCGGAGGCTATAACGGTGGAGCAGGAGGCTAGGGAAAGAACCGAGCCGTTCAAGAGCTGGCACACGAAGCTTGTGGAGTACAAAGGGAAGTTGGGGCTAATACGTGAGTTTAGCGAACCGGCGGCGGCGCGGAATGAGCTGTGGGTAATGGAGGATTACAAGGAAAGGGTTTGGACCAAAAAGTGGGAATTTTTGGAGTCGAATCCAACGGCTGTGTATGGATCAGATACTTTGATGGCGATGGAAAATAATGAAAAAGTGAAGTTTTGTAATGTGGAGACAGGTAATTACAGTTACCGACAGTTGGAACCAACCCATTATTACGGTTCTGTGCTTAAGGTTTTTCCTTTCTCGTCGGATTTTGAGCCGTGGGATTATTACCCTCCGCCGCCACGTTCACCCAACCCTCCAACTGTCGCTAAATTGCTTCGCCCGAGTCCTCCCGACAATTCCAAATAA

Protein sequence

MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVWTKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAKLLRPSPPDNSK

Homology

[Close]

BLAST of Carg03602 vs. NCBI nr
Match: XP_022934602.1 (F-box protein At5g49610-like [Cucurbita moschata])

HSP 1 Score: 794.3 bits (2050), Expect = 1.9e-226
Identity = 388/394 (98.48%), Postives = 389/394 (98.73%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRT 60
           MELPDDVILDILSRLPF AVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRT
Sbjct: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRT 60

Query: 61  TATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYT 120
           TATGRRHVLSFAT RP SPPLELSLSFLPGQTPQVLAV PNGLVLFQSRHRTRHQRQLYT
Sbjct: 61  TATGRRHVLSFATPRPNSPPLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRHQRQLYT 120

Query: 121 ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 180
           ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE
Sbjct: 121 ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 180

Query: 181 LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 240
           LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF
Sbjct: 181 LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 240

Query: 241 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVW 300
           AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVW
Sbjct: 241 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVW 300

Query: 301 TKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVFPFS 360
           TKKWEFL SNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVFPFS
Sbjct: 301 TKKWEFLVSNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVFPFS 360

Query: 361 SDFEPWDYYPPPPRSPNPPTVAKLLRPSPPDNSK 395
           SDFEPWDYYPPPPRSPNPPTVA+LLRPSPPDNSK
Sbjct: 361 SDFEPWDYYPPPPRSPNPPTVAELLRPSPPDNSK 394

[Close]

BLAST of Carg03602 vs. NCBI nr
Match: XP_022983376.1 (F-box protein At5g49610-like [Cucurbita maxima])

HSP 1 Score: 744.2 bits (1920), Expect = 2.3e-211
Identity = 364/394 (92.39%), Postives = 377/394 (95.69%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRT 60
           MELPDDVI++ILSRLPFHAVGKIRALSKSHNQATYTSYFKALAA HQPLLLGFLLQSLRT
Sbjct: 1   MELPDDVIIEILSRLPFHAVGKIRALSKSHNQATYTSYFKALAADHQPLLLGFLLQSLRT 60

Query: 61  TATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYT 120
           TATGRRHVLSFAT +P SPPLELSLSFLPGQ+PQVLAV PNGLVLFQ+RHRTR+QRQLYT
Sbjct: 61  TATGRRHVLSFATPQPNSPPLELSLSFLPGQSPQVLAVAPNGLVLFQTRHRTRYQRQLYT 120

Query: 121 ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 180
           ICKLPTKQWQ IPIPKTRFFTLNIAMYVT S+PLHF+IIRL RDTTFSKRRR  CYTVCE
Sbjct: 121 ICKLPTKQWQCIPIPKTRFFTLNIAMYVTPSSPLHFRIIRLFRDTTFSKRRRPVCYTVCE 180

Query: 181 LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 240
           +FDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHW+FFDEKSILAFDFLSETWSS 
Sbjct: 181 IFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWKFFDEKSILAFDFLSETWSSI 240

Query: 241 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVW 300
           AAPEAITVEQEARERTE FKSWHTKLVEYKGKLGLIREF EPAAARNELWVMEDYKERVW
Sbjct: 241 AAPEAITVEQEARERTELFKSWHTKLVEYKGKLGLIREFCEPAAARNELWVMEDYKERVW 300

Query: 301 TKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVFPFS 360
           TKKWEFLESNP AVYGSDTLMAMENNEKVKFCNVETGNYSYRQLE +HYYGS LKVFPFS
Sbjct: 301 TKKWEFLESNPMAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLERSHYYGSELKVFPFS 360

Query: 361 SDFEPWDYYPPPPRSPNPPTVAKLLRPSPPDNSK 395
           SDFEPWD+YPPPPRSPNPP V+KLLR SPPDNSK
Sbjct: 361 SDFEPWDFYPPPPRSPNPPIVSKLLRRSPPDNSK 394

[Close]

BLAST of Carg03602 vs. NCBI nr
Match: XP_023528881.1 (F-box protein At5g49610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 667.2 bits (1720), Expect = 3.5e-188
Identity = 328/336 (97.62%), Postives = 329/336 (97.92%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRT 60
           MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAA HQPLLLGFLLQSLRT
Sbjct: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAADHQPLLLGFLLQSLRT 60

Query: 61  TATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYT 120
           TATGRRHVLSFAT RP SPPLELSLSFLPGQ+PQVLAV PNGLVLFQSRHRTRHQRQLYT
Sbjct: 61  TATGRRHVLSFATPRPNSPPLELSLSFLPGQSPQVLAVAPNGLVLFQSRHRTRHQRQLYT 120

Query: 121 ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 180
           ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRS CYTV E
Sbjct: 121 ICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSVCYTVRE 180

Query: 181 LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 240
           LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF
Sbjct: 181 LFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 240

Query: 241 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERVW 300
           AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREF EPAAARNELWVMEDYKERVW
Sbjct: 241 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFREPAAARNELWVMEDYKERVW 300

Query: 301 TKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVET 337
           TKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVET
Sbjct: 301 TKKWEFLESNPTAVYGSDTLMAMENNEKVKFCNVET 336

[Close]

BLAST of Carg03602 vs. NCBI nr
Match: XP_008443600.1 (PREDICTED: F-box protein At5g49610-like [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 1.2e-98
Identity = 202/396 (51.01%), Postives = 268/396 (67.68%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGH--QPLLLGFLLQSL 60
           M+LPDDVIL+IL R   +  GKI+ LSK +N+ +Y+  +K L + +  QP+L GFLLQS 
Sbjct: 1   MDLPDDVILEILIRFSLNQAGKIQTLSKFYNKTSYSFCYKTLISENHSQPILDGFLLQSP 60

Query: 61  RTTATGRRHVLSFATLRP--ESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQR 120
           ++ +    H+LSF +  P   SPPL LSL+FLPG  PQ+ AV PNGL+L +++H  RH +
Sbjct: 61  KSKSNA--HLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNK 120

Query: 121 QL-YTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFC 180
           +L YTI KL T+QW+ +PIPKTR+FT NIAMYV RSNPLHFKI+RL  D   SKR   FC
Sbjct: 121 RLIYTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFC 180

Query: 181 YTVCELFDSESWRWKRLEDLVH--DNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFL 240
           YT+CE+FDSESWRWK+L+D+VH       +V+     V   GLAHW+F D+ SI AFDF 
Sbjct: 181 YTICEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFY 240

Query: 241 SETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVME 300
           SETWS  A PE I V  +    +  F+ WH +LVEY+GKLG++REF +P     ELWVME
Sbjct: 241 SETWSKIAMPETI-VNDKNNSSSSHFQRWHIELVEYEGKLGVVREFHKPTVF-TELWVME 300

Query: 301 DY-KERVWTKKWEFLESNPTAVYGSDTLMAM--ENNEKVKFCNVETGNYSYRQLEPTHYY 360
           +Y K+++W KK +   S PT  YGSD  M    +++  V F N+ETG  +Y++ E +H +
Sbjct: 301 NYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSEQSHRH 360

Query: 361 GSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAKLLR 387
             +  VFPF SDFE W+ + PPPRS  P  V+K+LR
Sbjct: 361 --LPMVFPFLSDFETWN-FNPPPRSIKPKAVSKILR 389

[Close]

BLAST of Carg03602 vs. NCBI nr
Match: XP_004136723.1 (PREDICTED: F-box protein At5g49610 [Cucumis sativus] >KGN59248.1 hypothetical protein Csa_3G785420 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 1.5e-90
Identity = 196/401 (48.88%), Postives = 257/401 (64.09%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQP-LLLGFLLQSLR 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60

Query: 61  TTATGRRHVLSFATLRPESP--PLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRH-QR 120
                  +++SF +   +SP  PL LSLSFLPG  P++ AV PNGL+L +S+H  RH +R
Sbjct: 61  PVPKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120

Query: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180

Query: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240

Query: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIREFSEPAA--ARN 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++REF +P A  A  
Sbjct: 241 DTWSKIAMPETI-VNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300

Query: 301 ELWVMEDYKERVWTKKWEFLESNPTAVYGSDTLMAMENN--EKVKFCNVETGNYSYRQLE 360
           ELWVM    ++ W KK EF    PT +YGSD L+   ++   KVKF N  TG+ +Y+ LE
Sbjct: 301 ELWVMH---KKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360

Query: 361 PTHYYGSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAKLLR 387
             H       VFPF SDF+ W+ + PP RS  P ++AK+LR
Sbjct: 361 QWHNIAPT--VFPFLSDFKSWN-FNPPQRSIQPKSLAKILR 392

[Close]

BLAST of Carg03602 vs. TAIR10
Match: AT1G64290.1 (F-box protein-related)

HSP 1 Score: 112.8 bits (281), Expect = 4.7e-25
Identity = 108/382 (28.27%), Postives = 169/382 (44.24%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D+I + LS LP   +GK R L+K  N+ +Y S+F  L       + G+ +Q       G 
Sbjct: 9   DMIQEFLSYLPASKIGKFRLLNKECNKRSYESWFVNLNLLRTNRISGYFIQ--HYIVKGH 68

Query: 66  RHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICKLP 125
               SF   R +     +S+ FLP    ++ A   +  +L   ++ T+  R  Y + K  
Sbjct: 69  ELRTSFVHERSDLQNNGVSIDFLPPGMIKIEACDASHGILLCVKY-TKPSRG-YIVFKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRR-------RSFCYTV 185
           TKQ+Q IP P+ + + +++ + V   NP  +KI RL +       R       R+F   +
Sbjct: 129 TKQYQVIPKPEVKGWDMSLGLAVIGLNPFRYKIQRLSQSRRMCMSRGIYHLNHRTF---M 188

Query: 186 CELFDSESWRWKRLED--LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSET 245
           CE+FDS+S+ WKRLE+  L   + L F  P    + V G  HW      +++ F   +ET
Sbjct: 189 CEVFDSDSFTWKRLENLRLPKTDRLIFSNP----IQVSGFLHW-ISRNNNVIRFCLKTET 248

Query: 246 WSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREF-SEPAAARNELWVMEDY 305
           WS F  P +                  + LV Y+GKLG IR++ ++     +ELWV++  
Sbjct: 249 WSFFHTPNS---------------DVFSGLVRYEGKLGAIRQWTNKDQEDVHELWVLKSS 308

Query: 306 KERVWTKKWEFLESNPTAVYGSDTLMAMENNEKVKF----------CNVETGNYSYRQLE 365
            E+ W K  +          G D +    +N+ V F           N E  N  Y + E
Sbjct: 309 FEKSWVKVKDIKS------IGVDLITWTPSNDVVLFRSSDRGCLYNINAEKLNLVYAKKE 354

Query: 366 PTHYYGSVLKVFPFSSDFEPWD 368
            +         FPF SD+E  D
Sbjct: 369 GS---DCSFVCFPFCSDYERVD 354

[Close]

BLAST of Carg03602 vs. TAIR10
Match: AT1G64295.1 (F-box associated ubiquitination effector family protein)

HSP 1 Score: 108.6 bits (270), Expect = 8.8e-24
Identity = 103/370 (27.84%), Postives = 172/370 (46.49%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D I ++LS L    +GK+R ++K  N+ +Y S+F  L       + G+ L+       G 
Sbjct: 9   DTIQEVLSYLRGSEIGKLRLINKECNKRSYESWFVNLNLHRTNNISGYFLERYE---RGY 68

Query: 66  RHVLSFATLRPESPPLELSLSFLP-GQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICKL 125
           +   SF   R +     +S+ FLP G+         +G++L  +  R   +   Y +CK 
Sbjct: 69  KLDTSFFHERRDLDNKGVSIDFLPQGEVKIKACDARHGILLCYNDTRPIPE---YIVCKP 128

Query: 126 PTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCELFDS 185
            TKQ+Q IP PK R    ++ + VT   P  +KI RL +    ++  R+F    CE+FDS
Sbjct: 129 TTKQYQIIPNPKVRSCDKSLGLTVTGLQPFRYKIFRLSKSPGMTRNLRTF---ACEVFDS 188

Query: 186 ESWRWKRLED--LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSFAA 245
           +S+ WKRL++  L   + L    P    V   G  HW+ ++  +++     +ETWS    
Sbjct: 189 DSFMWKRLKNLRLPRTDGLILSNP----VQASGFLHWRSWNH-NVIRLCPKTETWSFLHT 248

Query: 246 PEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREF-SEPAAARNELWVMEDYKERVWT 305
           P                     +LV Y+GKLG+IR + +      + LWV++   E+ W 
Sbjct: 249 PNV---------------GLFPELVSYEGKLGVIRHWINNNQEDVHRLWVLKSSFEKSW- 308

Query: 306 KKWEFLES----NPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYYGSVLKVF 365
           +K + +ES    + T +  +D +M + + + V   N+ T   +   L  T+   +    F
Sbjct: 309 EKVKDIESIGVEHITWIPSNDVVM-LSSWDHVCLYNLNTEKLN---LVHTNKDFASYVCF 344

Query: 366 PFSSDFEPWD 368
           PF SD+E  D
Sbjct: 369 PFCSDYERVD 344

[Close]

BLAST of Carg03602 vs. TAIR10
Match: AT5G49610.1 (F-box family protein)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-13
Identity = 78/306 (25.49%), Postives = 135/306 (44.12%), Query Frame = 0


Query: 4   PDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTAT 63
           PD+VIL IL+RLP  ++ + +++ KS  +     YF +L        L    Q L    +
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFN-----QLSVKEQLLVAEVS 69

Query: 64  GRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICK 123
               ++    LR  S   ELSL F+  +    + V  NGL+   S      ++ +Y +C 
Sbjct: 70  DSSSLICVDNLRGVS---ELSLDFVRDRVR--IRVSSNGLLCCSS----IPEKGVYYVCN 129

Query: 124 LPTKQWQRIP----IPKTRFFTLNIAMYVTRSNPL---HFKIIRLCRDTTFSKR-RRSFC 183
             T++++++P     P TRF+    A  V  +  L    F ++      +F +R   SF 
Sbjct: 130 PSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSF- 189

Query: 184 YTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSE 243
             +C +FDSES +W++   ++ + S + +    V V V G+ HW       ILA D   +
Sbjct: 190 --ICLVFDSESNKWRKFVSVLEECSFTHMSKNQV-VFVNGMLHWLMSGLCYILALDVEHD 249

Query: 244 TWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDY 302
            W   + P+ I +      R          L+E  G L +I    + +    ++W M +Y
Sbjct: 250 VWRKISLPDEIRIGNGGGNR--------VYLLESDGFLSVI----QLSDVWMKIWKMSEY 285

[Close]

BLAST of Carg03602 vs. TAIR10
Match: AT5G41720.1 (BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1))

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           DV+L+I+S  P   + K R LSK  N+ +Y   F           LG++    +     R
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFLGYIFY-YKDNKWFR 69

Query: 66  RHVLSFATLRPESPPLELSLSFLP---GQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTIC 125
            H   F +   E     ++L+FLP     + +        L+      + R +   Y +C
Sbjct: 70  NH-SCFVSGVDEKDKNRINLAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYIVC 129

Query: 126 KLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 181
           K  TKQ++ IP PKTRF T+   + V  SNP  +KIIR+    T+++  R   Y + E
Sbjct: 130 KPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRV--SDTWARVGRDGVYNLRE 183

[Close]

BLAST of Carg03602 vs. TAIR10
Match: AT2G05360.1 (BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT1G64295.1))

HSP 1 Score: 49.3 bits (116), Expect = 6.4e-06
Identity = 44/152 (28.95%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D+I ++LS LP    GK R L+K  N+ +Y S+F  L       + G+ L+S +    G 
Sbjct: 9   DMIQEVLSYLPASKNGKFRLLNKECNKRSYESWFLNLNFYRTNYISGYFLESYK---GGY 68

Query: 66  RHVLSFATLRPESPPLELSLSFLPGQTPQVLAV-GPNGLVLFQSRHRTRHQRQLYTICKL 125
               SF   R +     +S+ FLP    ++ A    +G++L  +      +   Y +CK 
Sbjct: 69  TIDTSFVHERRDLENKGVSIDFLPQGERKIKACDASHGILLCVNDTGLIPE---YIVCKP 128

Query: 126 PTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHF 157
            TKQ+  IP PK      ++ + VT   P  F
Sbjct: 129 TTKQYHIIPTPKLCSRDKSLGITVTGLEPFRF 154

[Close]

BLAST of Carg03602 vs. Swiss-Prot
Match: sp|Q9FGY4|FB341_ARATH (F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 78/306 (25.49%), Postives = 135/306 (44.12%), Query Frame = 0


Query: 4   PDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTAT 63
           PD+VIL IL+RLP  ++ + +++ KS  +     YF +L        L    Q L    +
Sbjct: 10  PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFN-----QLSVKEQLLVAEVS 69

Query: 64  GRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICK 123
               ++    LR  S   ELSL F+  +    + V  NGL+   S      ++ +Y +C 
Sbjct: 70  DSSSLICVDNLRGVS---ELSLDFVRDRVR--IRVSSNGLLCCSS----IPEKGVYYVCN 129

Query: 124 LPTKQWQRIP----IPKTRFFTLNIAMYVTRSNPL---HFKIIRLCRDTTFSKR-RRSFC 183
             T++++++P     P TRF+    A  V  +  L    F ++      +F +R   SF 
Sbjct: 130 PSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSF- 189

Query: 184 YTVCELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSE 243
             +C +FDSES +W++   ++ + S + +    V V V G+ HW       ILA D   +
Sbjct: 190 --ICLVFDSESNKWRKFVSVLEECSFTHMSKNQV-VFVNGMLHWLMSGLCYILALDVEHD 249

Query: 244 TWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDY 302
            W   + P+ I +      R          L+E  G L +I    + +    ++W M +Y
Sbjct: 250 VWRKISLPDEIRIGNGGGNR--------VYLLESDGFLSVI----QLSDVWMKIWKMSEY 285

[Close]

BLAST of Carg03602 vs. Swiss-Prot
Match: sp|Q6NLE0|FB279_ARATH (F-box protein At5g41720 OS=Arabidopsis thaliana OX=3702 GN=At5g41720 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.2e-07
Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           DV+L+I+S  P   + K R LSK  N+ +Y   F           LG++    +     R
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFLGYIFY-YKDNKWFR 69

Query: 66  RHVLSFATLRPESPPLELSLSFLP---GQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTIC 125
            H   F +   E     ++L+FLP     + +        L+      + R +   Y +C
Sbjct: 70  NH-SCFVSGVDEKDKNRINLAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYIVC 129

Query: 126 KLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTVCE 181
           K  TKQ++ IP PKTRF T+   + V  SNP  +KIIR+    T+++  R   Y + E
Sbjct: 130 KPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRV--SDTWARVGRDGVYNLRE 183

[Close]

BLAST of Carg03602 vs. Swiss-Prot
Match: sp|P0C2G2|FB21_ARATH (Putative F-box protein At1g30920 OS=Arabidopsis thaliana OX=3702 GN=At1g30920 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-04
Identity = 74/311 (23.79%), Postives = 121/311 (38.91%), Query Frame = 0


Query: 3   LPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKAL---AAGHQPLLLGFLLQSLR 62
           +P D+ILDILSRLP  ++ + R +SK        SYF  L    +  +P LL  + Q   
Sbjct: 10  IPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTRSSSRPHLLIAVEQEGE 69

Query: 63  TTATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRH-RTRHQRQL 122
                     ++           L L F   + PQ      + L+ F +   R +    L
Sbjct: 70  WKFFSLPQPKNYLGKSSLVVAANLHLKFFEDKRPQHGCSYASSLIYFPNMTIRKKGDDHL 129

Query: 123 YTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYTV 182
             IC   T Q+  + +P    F           +P+  +   L     F K +       
Sbjct: 130 GVICNPSTGQYGYVILPPLLDFKSVPYGKFLGFDPIDKQFKVLIPIFDFDKHQTDHHILT 189

Query: 183 CELFDSESWRWKRLED----LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSIL-AFDFL 242
                +E+  W++++     L H N        C+  ++  LA   +  +K++L  FD  
Sbjct: 190 ---LGAETVGWRKIQSPLRYLPHSNG-----TICINGILYYLAKINYAMDKNVLVCFDVR 249

Query: 243 SETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLI-REFSEPAA--ARNELW 302
           SE +                 R   + S  TKLV YKGKLG+I +E+ +      +  +W
Sbjct: 250 SENFVFL--------------RLNTYCS-STKLVNYKGKLGMINQEYVDDGGFPLKLSVW 297

[Close]

BLAST of Carg03602 vs. TrEMBL
Match: tr|A0A1S3B7Y4|A0A1S3B7Y4_CUCME (F-box protein At5g49610-like OS=Cucumis melo OX=3656 GN=LOC103487156 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.7e-99
Identity = 202/396 (51.01%), Postives = 268/396 (67.68%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGH--QPLLLGFLLQSL 60
           M+LPDDVIL+IL R   +  GKI+ LSK +N+ +Y+  +K L + +  QP+L GFLLQS 
Sbjct: 1   MDLPDDVILEILIRFSLNQAGKIQTLSKFYNKTSYSFCYKTLISENHSQPILDGFLLQSP 60

Query: 61  RTTATGRRHVLSFATLRP--ESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQR 120
           ++ +    H+LSF +  P   SPPL LSL+FLPG  PQ+ AV PNGL+L +++H  RH +
Sbjct: 61  KSKSNA--HLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNK 120

Query: 121 QL-YTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFC 180
           +L YTI KL T+QW+ +PIPKTR+FT NIAMYV RSNPLHFKI+RL  D   SKR   FC
Sbjct: 121 RLIYTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFC 180

Query: 181 YTVCELFDSESWRWKRLEDLVH--DNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFL 240
           YT+CE+FDSESWRWK+L+D+VH       +V+     V   GLAHW+F D+ SI AFDF 
Sbjct: 181 YTICEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFY 240

Query: 241 SETWSSFAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVME 300
           SETWS  A PE I V  +    +  F+ WH +LVEY+GKLG++REF +P     ELWVME
Sbjct: 241 SETWSKIAMPETI-VNDKNNSSSSHFQRWHIELVEYEGKLGVVREFHKPTVF-TELWVME 300

Query: 301 DY-KERVWTKKWEFLESNPTAVYGSDTLMAM--ENNEKVKFCNVETGNYSYRQLEPTHYY 360
           +Y K+++W KK +   S PT  YGSD  M    +++  V F N+ETG  +Y++ E +H +
Sbjct: 301 NYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSEQSHRH 360

Query: 361 GSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAKLLR 387
             +  VFPF SDFE W+ + PPPRS  P  V+K+LR
Sbjct: 361 --LPMVFPFLSDFETWN-FNPPPRSIKPKAVSKILR 389

[Close]

BLAST of Carg03602 vs. TrEMBL
Match: tr|A0A0A0LBP1|A0A0A0LBP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G785420 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 196/401 (48.88%), Postives = 257/401 (64.09%), Query Frame = 0


Query: 1   MELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQP-LLLGFLLQSLR 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60

Query: 61  TTATGRRHVLSFATLRPESP--PLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRH-QR 120
                  +++SF +   +SP  PL LSLSFLPG  P++ AV PNGL+L +S+H  RH +R
Sbjct: 61  PVPKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120

Query: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180

Query: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240

Query: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIREFSEPAA--ARN 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++REF +P A  A  
Sbjct: 241 DTWSKIAMPETI-VNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300

Query: 301 ELWVMEDYKERVWTKKWEFLESNPTAVYGSDTLMAMENN--EKVKFCNVETGNYSYRQLE 360
           ELWVM    ++ W KK EF    PT +YGSD L+   ++   KVKF N  TG+ +Y+ LE
Sbjct: 301 ELWVMH---KKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360

Query: 361 PTHYYGSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAKLLR 387
             H       VFPF SDF+ W+ + PP RS  P ++AK+LR
Sbjct: 361 QWHNIAPT--VFPFLSDFKSWN-FNPPQRSIQPKSLAKILR 392

[Close]

BLAST of Carg03602 vs. TrEMBL
Match: tr|V4U5Z5|V4U5Z5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007128mg PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-43
Identity = 130/375 (34.67%), Postives = 191/375 (50.93%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D++ +ILSR     VG+ R +SK  N  TY SYF  L       + GFLL S+ +     
Sbjct: 9   DILSEILSRATLQTVGRCRLVSKECNDLTYRSYFMHLHCQRTRTISGFLLASMMS----H 68

Query: 66  RHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICKLP 125
           +H   F +     P + +SL FLPG   ++LA    GL+L  +     H+   Y +CK  
Sbjct: 69  KHPAEFVSTDNNIPNI-VSLRFLPG-CARILACTNQGLLLCLNSRPKCHRIPEYYVCKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYT---VCELF 185
           TK+WQ+IP PKTR+F  N+AM V R +PL +KIIRL   +      R   Y     CE+F
Sbjct: 129 TKEWQQIPNPKTRYFARNVAMMVLRLDPLRYKIIRLSEPSHLRNLNRKHAYEHCFCCEVF 188

Query: 186 DSESWRWKRLEDLV--HDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 245
           DSE W W++LE++   +D  L+  +P   A+   G  HW    EK+ILAF+   ETW+  
Sbjct: 189 DSERWAWRQLEEMYFPYDEVLT-SKP---AISACGAFHW-LTSEKNILAFNADDETWTML 248

Query: 246 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDY-KERV 305
           + P+A+             KS++ +L  Y+GKL  +R+         ELWVMEDY  +++
Sbjct: 249 SVPDAVN-----------NKSYYLQLAGYQGKLACLRK-ERGREDCFELWVMEDYFGKKL 308

Query: 306 WTKKW---------EFLESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYY 365
           W KK          E    +P A+Y ++  +     ++V F     G++   +L+  HY 
Sbjct: 309 WNKKHTVSTKPLQIEERFVSPEALYNAENALVRSYYDRVYFYKFADGSFDAVKLKNGHYD 357

[Close]

BLAST of Carg03602 vs. TrEMBL
Match: tr|A0A2H5PMY2|A0A2H5PMY2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_151170 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-43
Identity = 131/375 (34.93%), Postives = 190/375 (50.67%), Query Frame = 0


Query: 6   DVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTTATGR 65
           D++ +ILSR     VG+ R  SK  N  TY SYF  L       + GFLL S+ +     
Sbjct: 9   DILSEILSRATLQTVGRCRLASKECNDLTYRSYFMHLHCQRTRTISGFLLASMMS----H 68

Query: 66  RHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTICKLP 125
           +H   F +     P + +SL FLPG   ++LA    GL+L  +     H+   Y +CK  
Sbjct: 69  KHPAEFVSTDNNIPNI-VSLRFLPG-CARILACTNQGLLLCLNSRPKCHRIPEYYVCKPT 128

Query: 126 TKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCYT---VCELF 185
           TK+WQ+IP PKTR+F  N+AM V R +PL +KIIRL   +      R   Y     CE+F
Sbjct: 129 TKEWQQIPNPKTRYFARNVAMMVLRLDPLRYKIIRLSEPSHLRNLNRKHAYEHCFCCEVF 188

Query: 186 DSESWRWKRLED--LVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSSF 245
           DSE W W++LE+  L +D  L+  +P   A+   G  HW    EK+ILAF+   ETW+  
Sbjct: 189 DSERWAWRQLEEMYLPYDEVLT-SKP---AISACGAFHW-LTSEKNILAFNADDETWTML 248

Query: 246 AAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDY-KERV 305
           + P+A+             KS++ +L  Y+GKL  +R+         ELWVMEDY  +++
Sbjct: 249 SVPDAVN-----------NKSYYLQLAGYQGKLACLRK-ERGREDCFELWVMEDYFGKKL 308

Query: 306 WTKKW---------EFLESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYY 365
           W KK          E    +P A+Y ++  +     ++V F     G++   +L+  HY 
Sbjct: 309 WNKKHTVSTKPLQIEERFVSPEALYNAENALVRSYYDRVYFYKFTDGSFDAVKLKNGHYD 357

[Close]

BLAST of Carg03602 vs. TrEMBL
Match: tr|A0A2K1YYL5|A0A2K1YYL5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G224400v3 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 126/377 (33.42%), Postives = 190/377 (50.40%), Query Frame = 0


Query: 2   ELPDDVILDILSRLPFHAVGKIRALSKSHNQATYTSYFKALAAGHQPLLLGFLLQSLRTT 61
           +   D+I +IL+R     VG+ R LSK  N  TY S F  L +     + G+ +QS+ + 
Sbjct: 5   DFSSDIIYEILTRSSMETVGRCRLLSKECNSITYDSIFTNLHSHRTNTISGYFMQSMMSN 64

Query: 62  ATGRRHVLSFATLRPESPPLELSLSFLPGQTPQVLAVGPNGLVLFQSRHRTRHQRQLYTI 121
                 V   +T     P  +LSL+FLP +  ++      G++L     RT H R  Y +
Sbjct: 65  RFYSSFVSIDSTTWRSYP--KLSLNFLPDRV-EIQGSTNQGILLC----RTHHPR--YYV 124

Query: 122 CKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY--TVC 181
           CK  TKQW+RIP PKTR+ T+   M V RSNPLH+KI R  +  T    +  F Y    C
Sbjct: 125 CKPTTKQWRRIPNPKTRYHTIATGMIVIRSNPLHYKIARFSQPKTRCHDKEFFQYYWVRC 184

Query: 182 ELFDSESWRWKRLEDLVHDNSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLSETWSS 241
           ELFDS++W WK+L+++   N  S       AV V G  HW  + E +I AF    E++S 
Sbjct: 185 ELFDSKTWTWKQLDEVKLQNHESLSRK--PAVSVSGSLHWLTWVENNIFAFHVSKESYSM 244

Query: 242 FAAPEAITVEQEARERTEPFKSWHTKLVEYKGKLGLIREFSEPAAARNELWVMEDYKERV 301
           F+ P +++ + + ++          +LVEY GKL +     + ++   ELWVME+Y +  
Sbjct: 245 FSLPLSVSQDNKGKD---------IELVEYMGKLAVTCIGKDESSM--ELWVMENYGKTE 304

Query: 302 WTKKWEF---------LESNPTAVYGSDTLMAMENNEKVKFCNVETGNYSYRQLEPTHYY 361
           W K+++           ++ P A Y +D ++  E + +V F N + G++    LE     
Sbjct: 305 WNKRYKINIEALRRKEPDTRPAAFYNADIVLMKEYDHRVTFFNFKNGSFDRLSLENNVNR 355

Query: 362 GSVLKVFPFSSDFEPWD 368
           G     F F SDFEP D
Sbjct: 365 G----CFRFQSDFEPSD 355

The following BLAST results are available for this feature:

BLAST of Carg03602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934602.1	1.9e-226	98.48	F-box protein At5g49610-like [Cucurbita moschata]	[more]
XP_022983376.1	2.3e-211	92.39	F-box protein At5g49610-like [Cucurbita maxima]	[more]
XP_023528881.1	3.5e-188	97.62	F-box protein At5g49610-like [Cucurbita pepo subsp. pepo]	[more]
XP_008443600.1	1.2e-98	51.01	PREDICTED: F-box protein At5g49610-like [Cucumis melo]	[more]
XP_004136723.1	1.5e-90	48.88	PREDICTED: F-box protein At5g49610 [Cucumis sativus] >KGN59248.1 hypothetical pr...	[more]

BLAST of Carg03602 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64290.1	4.7e-25	28.27	F-box protein-related	[more]
AT1G64295.1	8.8e-24	27.84	F-box associated ubiquitination effector family protein	[more]
AT5G49610.1	7.0e-13	25.49	F-box family protein	[more]
AT5G41720.1	1.8e-08	29.21	BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G6429...	[more]
AT2G05360.1	6.4e-06	28.95	BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effe...	[more]

BLAST of Carg03602 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FGY4\|FB341_ARATH	1.3e-11	25.49	F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1	[more]
sp\|Q6NLE0\|FB279_ARATH	3.2e-07	29.21	F-box protein At5g41720 OS=Arabidopsis thaliana OX=3702 GN=At5g41720 PE=2 SV=1	[more]
sp\|P0C2G2\|FB21_ARATH	2.0e-04	23.79	Putative F-box protein At1g30920 OS=Arabidopsis thaliana OX=3702 GN=At1g30920 PE...	[more]

BLAST of Carg03602 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7Y4\|A0A1S3B7Y4_CUCME	7.7e-99	51.01	F-box protein At5g49610-like OS=Cucumis melo OX=3656 GN=LOC103487156 PE=4 SV=1	[more]
tr\|A0A0A0LBP1\|A0A0A0LBP1_CUCSA	1.0e-90	48.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G785420 PE=4 SV=1	[more]
tr\|V4U5Z5\|V4U5Z5_9ROSI	1.6e-43	34.67	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007128mg PE=4 ...	[more]
tr\|A0A2H5PMY2\|A0A2H5PMY2_CITUN	2.1e-43	34.93	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_151170 PE=4 SV=1	[more]
tr\|A0A2K1YYL5\|A0A2K1YYL5_POPTR	1.3e-42	33.42	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G224400v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03602-RA	Carg03602-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 155..337 e-value: 2.4E-10 score: 38.1
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 217..334 e-value: 1.4E-10 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..394
None	No IPR available	PANTHER	PTHR44547	FAMILY NOT NAMED	coord: 2..363

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03602	Cla017589	Watermelon (97103) v1	carwmB0237
Carg03602	Csa3G785420	Cucumber (Chinese Long) v2	carcuB0276
Carg03602	MELO3C009576	Melon (DHL92) v3.5.1	carmeB0251
Carg03602	ClCG10G017950	Watermelon (Charleston Gray)	carwcgB0240
Carg03602	CSPI03G35980	Wild cucumber (PI 183967)	carcpiB0280
Carg03602	Cucsa.242230	Cucumber (Gy14) v1	carcgyB0294
Carg03602	CmoCh14G003840	Cucurbita moschata (Rifu)	carcmoB0347
Carg03602	Lsi03G017840	Bottle gourd (USVL1VR-Ls)	carlsiB225
Carg03602	Cp4.1LG03g00250	Cucurbita pepo (Zucchini)	carcpeB0353
Carg03602	MELO3C009576.2	Melon (DHL92) v3.6.1	carmedB0261
Carg03602	CsaV3_3G038340	Cucumber (Chinese Long) v3	carcucB0279
Carg03602	Cla97C10G200910	Watermelon (97103) v2	carwmbB0254
Carg03602	Bhi11G002066	Wax gourd	carwgoB0321

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03602	Silver-seed gourd	carcarB291
Carg03602	Cucumber (Gy14) v2	carcgybB0263
Carg03602	Cucurbita maxima (Rimu)	carcmaB0343
Carg03602	Cucurbita maxima (Rimu)	carcmaB0350
Carg03602	Cucurbita moschata (Rifu)	carcmoB0351
Carg03602	Cucurbita pepo (Zucchini)	carcpeB0354