CmoCh13G010950 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGTAATGGATGAAGATTTGGGGTTTGGTGAATACCCATTTAATGAGTTGAAGATGATGATGAGAAGAGAAGGCGATGAGGAAGATGAATCAAACGGTTCATGTGGTTTCCATAGAGAAATATTGTTCCCTTCGATGAACACTAATTGTAGTAATGTGTTCTCCTCTCCCAATTCCGCGTCGTGCGATACCGTTCTCGATCCGCATCGCCATCACCATCTTAGCGTGATGGCGGAGCGGAAGCTGAGAAGAATGATATCGAATCGGGAGTCGGCAAGGAGGTCGAGGATGAGGAAGAAGAAGCAGATCGAGGAGTTGCAATACCAGGCAAGATCGTTTGTTTCTTTGTTTGATTGATTGATTGATATTTTTCGATATTGTTGCGAGAAATTTTCAGACTTTGTTCGGTCTCAGGTCGGGCAGTTGGAAGGTTCGAACCGTCAGCTGTCGGAGAAGCTGATTCAGCTGCTGGAATGCAACCAGCAGATCCTGCATGA ATGTGTGTAATGGATGAAGATTTGGGGTTTGGTGAATACCCATTTAATGAGTTGAAGATGATGATGAGAAGAGAAGGCGATGAGGAAGATGAATCAAACGGTTCATGTGGTTTCCATAGAGAAATATTGTTCCCTTCGATGAACACTAATTGTAGTAATGTGTTCTCCTCTCCCAATTCCGCGTCGTGCGATACCGTTCTCGATCCGCATCGCCATCACCATCTTAGCGTGATGGCGGAGCGGAAGCTGAGAAGAATGATATCGAATCGGGAGTCGGCAAGGAGGTCGAGGATGAGGAAGAAGAAGCAGATCGAGGAGTTGCAATACCAGGCAAGATCACTTTGTTCGGTCTCAGGTCGGGCAGTTGGAAGGTTCGAACCGTCAGCTGTCGGAGAAGCTGATTCAGCTGCTGGAATGCAACCAGCAGATCCTGCATGA ATGTGTGTAATGGATGAAGATTTGGGGTTTGGTGAATACCCATTTAATGAGTTGAAGATGATGATGAGAAGAGAAGGCGATGAGGAAGATGAATCAAACGGTTCATGTGGTTTCCATAGAGAAATATTGTTCCCTTCGATGAACACTAATTGTAGTAATGTGTTCTCCTCTCCCAATTCCGCGTCGTGCGATACCGTTCTCGATCCGCATCGCCATCACCATCTTAGCGTGATGGCGGAGCGGAAGCTGAGAAGAATGATATCGAATCGGGAGTCGGCAAGGAGGTCGAGGATGAGGAAGAAGAAGCAGATCGAGGAGTTGCAATACCAGGCAAGATCACTTTGTTCGGTCTCAGGTCGGGCAGTTGGAAGGTTCGAACCGTCAGCTGTCGGAGAAGCTGATTCAGCTGCTGGAATGCAACCAGCAGATCCTGCATGA
BLAST of CmoCh13G010950 vs. TrEMBL
Match: A0A0A0LTK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G040010 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 98/182 (53.85%), Postives = 108/182 (59.34%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TrEMBL
Match: B9IE26_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s03580g PE=4 SV=2) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-06 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TrEMBL
Match: A0A059A5T3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02632 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.8e-06 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TrEMBL
Match: A0A067K596_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11777 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.6e-06 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TrEMBL
Match: A0A061FXG4_THECC (Basic leucine-zipper 70, putative OS=Theobroma cacao GN=TCM_014407 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.9e-06 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TAIR10
Match: AT5G60830.1 (AT5G60830.1 basic leucine-zipper 70) HSP 1 Score: 50.8 bits (120), Expect = 8.0e-07 Identity = 37/67 (55.22%), Postives = 43/67 (64.18%), Query Frame = 1
BLAST of CmoCh13G010950 vs. TAIR10
Match: AT2G04038.1 (AT2G04038.1 basic leucine-zipper 48) HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06 Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 1
BLAST of CmoCh13G010950 vs. NCBI nr
Match: gi|700208991|gb|KGN64087.1| (hypothetical protein Csa_1G040010 [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 1.5e-31 Identity = 98/182 (53.85%), Postives = 108/182 (59.34%), Query Frame = 1
BLAST of CmoCh13G010950 vs. NCBI nr
Match: gi|659066657|ref|XP_008454802.1| (PREDICTED: light-inducible protein CPRF3-like [Cucumis melo]) HSP 1 Score: 139.4 bits (350), Expect = 4.9e-30 Identity = 95/157 (60.51%), Postives = 101/157 (64.33%), Query Frame = 1
BLAST of CmoCh13G010950 vs. NCBI nr
Match: gi|449439673|ref|XP_004137610.1| (PREDICTED: basic leucine zipper 43-like [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 1.9e-29 Identity = 93/157 (59.24%), Postives = 97/157 (61.78%), Query Frame = 1
BLAST of CmoCh13G010950 vs. NCBI nr
Match: gi|743932155|ref|XP_011010367.1| (PREDICTED: basic leucine zipper 10-like [Populus euphratica]) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-06 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
BLAST of CmoCh13G010950 vs. NCBI nr
Match: gi|566205655|ref|XP_002321470.2| (hypothetical protein POPTR_0015s03580g, partial [Populus trichocarpa]) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-06 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |