CmoCh13G005480 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G005480
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionChitinase family protein
LocationCmo_Chr13 : 6332976 .. 6334876 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACGTAAGTATTCTCTGTTAAGAATTATTGAAAGAAATAGTCTCATATTAACTAATTATTATAAGGATTGTTGGGAGGATGTTCGACCTTGACTAATTAACTAGATGATCATGATTTTATTAACAAGAAATACATCTCCATAATGCCTATTGGGGAATCAAAAGGCTTCATGGCTTTGAGCGTAAGCTCTCATAAACTTTGTTTTTGGTTTCTCCAAAAAGTCTCATGAACACGCATTCCTTGATTATAAACGCATGATCATTCCTTAAATTAGCGTATGTGGGACTCCCTCCCAACAATCCTCAACATATCATTCCATTGTGAAGAGTCGTAGTTTCTAACATTCTCTCTCCTCATCCCCTCCCAGCTACATCTCTGAAACTAAGATGGACTCATGAATTTTTGTGGAGAGTCGAGGATAATATCATATCATTGTGGATAGTCGTGGTTCCTAATATCTCTAAAACTAAGATGAACCCATGAATTTTTGTGGAGAGTCGTGGTGAACCCATGAATTTTTGTGGGGAGCAGTGGACAATATCATATTATTGTAGAGAGTTGTAGTTCCTAACATCTCTAAAACTAAGATGAACCCATGAATTTTTGTAGAGAGTCGTGGTGAACCCATGAATTTTTGTGGGAAGTCGTGGTGAACCCATAAATTTTTGTGGGGAGCCGTGGACAGCATTATATCATTGTAGAGAGTCGTGATTTCTAATATCTCTAAAACTAAGACGAACCCATGAATTTTTGTGGAGAGTCATAGTGAACCCATGAATTTTTGTGGGAAGTCACGGAAAACCCATAAATTTTTGTGGGGAGCAATGGACAGTAATATATCATTGTAGAGAGTCGTGGTCCTTAATATCTCTAAAACCAAGATGAACCCATGAATTTTTGTGGAGAGTCGTAGTGAACCCATGAATTTTTGTGGGGTATCATTGTAGAGAGTCTAGTAGTTTCATAAACTTAATTTTTGTGTGTTTGTATGCAGATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAGAACATTAATTAAGTTTCTTAATTGTGTTAGAACATTAATAAATTTGTATGATCCATACAATCCATACCATATATATAATGATATTTTATTTCATATCTCAAAA

mRNA sequence

ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAGAACATTAATTAAGTTTCTTAATTGTGTTAGAACATTAATAAATTTGTATGATCCATACAATCCATACCATATATATAATGATATTTTATTTCATATCTCAAAA

Coding sequence (CDS)

ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAG
Homology
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BLAST of CmoCh13G005480 vs. Swiss-Prot
Match: CHI5_ARATH (Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 5.3e-115
Identity = 186/249 (74.70%), Postives = 213/249 (85.54%), Query Frame = 1 

Query: 20  AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVNDVVVADFVTEEFFNGI 79
           AQNCGC++ LCCS+FGFCG  +D+CG GC++GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 80  INQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAAFFGHVTHETGHLCFIE 139
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFF HVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 140 EIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGESIGFDGLNNPEIVATN 199
           EIDGA+KDYCDE+ TQYPCNP+KGY+GRGPIQLSWNFNYGPAG +IGFDGLN PE VAT+
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 200 PLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSATVQRRVEYYTQYCNQLG 259
           P++SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN+ATVQ RV YYT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 260 VAPGDNLTC 269
           V PG+NLTC
Sbjct: 268 VDPGNNLTC 273

[Close]
BLAST of CmoCh13G005480 vs. Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-108
Identity = 184/272 (67.65%), Postives = 213/272 (78.31%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAG---AAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M   L+L +  V ++ G    +AQNCGCA GLCCS++G+CGTG D+CGTGC++GPC    
Sbjct: 1   MGNKLVLVLVAVALVMGPKNVSAQNCGCAEGLCCSQYGYCGTGEDYCGTGCQQGPCTTAS 60

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
             PS N  V AD +T +F NGII+QAD+GCAG+ FY+R  FL AL S+  FGR+GS DDS
Sbjct: 61  PPPSNN--VNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDS 120

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDN-TQYPCNPSKGYFGRGPIQLSWNF 180
           KREIAA F H THETGH C+IEEIDGA+KDYCDE++  QYPC+ SKGY GRGPIQLSWNF
Sbjct: 121 KREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNF 180

Query: 181 NYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 240
           NYGPAG +  FDGL  PE V+ + +VSFKTALWYWM  VRPVINQGFGATIRAINGALEC
Sbjct: 181 NYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALEC 240

Query: 241 DGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           DGAN  TVQ RV YYT+YC QLGVA GDNLTC
Sbjct: 241 DGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270

[Close]
BLAST of CmoCh13G005480 vs. Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.7e-97
Identity = 166/275 (60.36%), Postives = 202/275 (73.45%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAG-----AAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNI 60
           M R L L   ++ ++A      AAAQ+CGCA+  CCS++GFCGTG+D+CGTGC+ GPC++
Sbjct: 1   MARRLSLLAVVLAMVAAVSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDV 60

Query: 61  PPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVD 120
           P    + NDV VA  VT EFF  ++ QAD GCA +GFY+R  FL A   +  FGR GSVD
Sbjct: 61  P----ATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVD 120

Query: 121 DSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWN 180
           DSKREIAAFF H  HET   C+IEEIDG +K+YCDE +TQ+PC   KGY+GRGP+Q+SWN
Sbjct: 121 DSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWN 180

Query: 181 FNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRP--VINQGFGATIRAINGA 240
           FNYGPAG+SIGFDGL +P+ VA +P+++F+TALWYW N V    V  QGFGATIRAINGA
Sbjct: 181 FNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGA 240

Query: 241 LECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           LECDG N   V  RV YY Q+C Q GV PG NLTC
Sbjct: 241 LECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271

[Close]
BLAST of CmoCh13G005480 vs. Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-92
Identity = 160/276 (57.97%), Postives = 194/276 (70.29%), Query Frame = 1 

Query: 4   ALLLTVTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPC---------- 63
           ALLL+ T       A+AQNCGC + +CCS++G+CGTG D+CG GCR GPC          
Sbjct: 18  ALLLSAT-----GQASAQNCGCQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGG 77

Query: 64  -NIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIG 123
                     + V V   VTE FFNGI NQA  GCAG+ FY+R +FL A  S+  F R  
Sbjct: 78  GGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDR 137

Query: 124 SVDDSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQL 183
           + DDSKREIAAFF HVTHETGH+C+I EI+GA+ DYCD++N Q+PC P K Y+GRGP+Q+
Sbjct: 138 TNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQI 197

Query: 184 SWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAING 243
           SWN+NYGPAG++IGFDGL +P+ VA +P +SFKTALW+WMN V  V+ QGFGATIRAING
Sbjct: 198 SWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAING 257

Query: 244 ALECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           ALEC+G N   V  RV YY  YC Q GV PG NL C
Sbjct: 258 ALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288

[Close]
BLAST of CmoCh13G005480 vs. Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-91
Identity = 156/268 (58.21%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 11  LVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPC----------NIPPLTP 70
           L+   A AAAQNCGC  G CCS++G+CGT   +CG GC+ GPC                 
Sbjct: 18  LLSAAAPAAAQNCGCQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG 77

Query: 71  SVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKRE 130
           +   V V   VTE FFNGI NQA  GCAG+ FY+R +FL A +S+  F    + DDSKRE
Sbjct: 78  AGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKRE 137

Query: 131 IAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGP 190
           IAAFF HVTHETGH+C+I EI+GA  DYCD+ N Q+PC P K Y+GRGP+Q+SWNFNYGP
Sbjct: 138 IAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGP 197

Query: 191 AGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGAN 250
           AG++IGFDGL +P+ VA +P +SFKTALW+WMN V  V++QGFGATIRAINGALEC+G N
Sbjct: 198 AGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKN 257

Query: 251 SATVQRRVEYYTQYCNQLGVAPGDNLTC 269
              V  RV YY  YC Q GV+PG NL C
Sbjct: 258 PGAVNARVNYYKDYCRQFGVSPGGNLYC 285

[Close]
BLAST of CmoCh13G005480 vs. TrEMBL
Match: A0A0A0LXT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 7.4e-148
Identity = 245/269 (91.08%), Postives = 260/269 (96.65%), Query Frame = 1 

Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT + L+GIIAGAAAQNCGCAAGLCCSRFGFCG G DFCGTGCREGPCNIPPLT
Sbjct: 10  MQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPPLT 69

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEALQSFDRFGRIGSV+DSKR
Sbjct: 70  PSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDSKR 129

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGHLCFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 130 EIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 189

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 190 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 249

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRR+++Y QYCNQL VAPG+NLTC
Sbjct: 250 NTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

[Close]
BLAST of CmoCh13G005480 vs. TrEMBL
Match: B9VQ34_PYRPY (Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1 

Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of CmoCh13G005480 vs. TrEMBL
Match: A0A077GZM8_9ROSA (Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1 

Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of CmoCh13G005480 vs. TrEMBL
Match: A0A061ER07_THECC (Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.2e-125
Identity = 209/271 (77.12%), Postives = 236/271 (87.08%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAGAA---AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M R  LL + L GIIAGAA   AQNCGCA GLCCSR+GFCGTG+DFCGTGC+EGPCN PP
Sbjct: 6   MIRKGLLAIVLAGIIAGAAPVKAQNCGCAEGLCCSRWGFCGTGDDFCGTGCQEGPCNPPP 65

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
              ++N+V VAD VT +FFNGI+++A+A C G+ FYSRA FLEAL S+ +FGRIGS+DDS
Sbjct: 66  ---TLNNVSVADIVTPQFFNGILDEAEASCEGKNFYSRAAFLEALNSYPQFGRIGSIDDS 125

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFN 180
           KREIAAFFGHVTHETGH CFIEEI+G T+DYCDE +TQYPCNP KGY+GRGPIQLSWNFN
Sbjct: 126 KREIAAFFGHVTHETGHFCFIEEINGTTRDYCDESSTQYPCNPDKGYYGRGPIQLSWNFN 185

Query: 181 YGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 240
           YGPAGESIGFDGLN+PE VAT+P++SFKTALWYW+NFV+PVI QGFGATIRAINGALECD
Sbjct: 186 YGPAGESIGFDGLNSPETVATDPVISFKTALWYWVNFVQPVIGQGFGATIRAINGALECD 245

Query: 241 GANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           G N ATVQ R+EYYT YCNQLGV PG NLTC
Sbjct: 246 GGNPATVQARIEYYTDYCNQLGVDPGANLTC 273

[Close]
BLAST of CmoCh13G005480 vs. TrEMBL
Match: A0A059DAK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-123
Identity = 207/273 (75.82%), Postives = 235/273 (86.08%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAGA-----AAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNI 60
           +++ LL  V + GII  A     +AQNCGCAA  CCSR+G+CGTG+D+CGTGC+EGPCN 
Sbjct: 6   LRKLLLTAVAVAGIIISALPDTTSAQNCGCAADQCCSRWGYCGTGDDYCGTGCQEGPCNA 65

Query: 61  PPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVD 120
           PP T   NDVVVAD VTE FF+GII QA   C G+GFYSR TFLEA  S+ +FGR+GSVD
Sbjct: 66  PPPT---NDVVVADVVTEAFFDGIIGQAAESCEGKGFYSRGTFLEAAGSYPQFGRVGSVD 125

Query: 121 DSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWN 180
           DSKREIAAFF HVTHETGH C+I EIDGA+KDYCDE NTQYPC+P+KGY+GRGPIQLSWN
Sbjct: 126 DSKREIAAFFAHVTHETGHFCYINEIDGASKDYCDETNTQYPCSPNKGYYGRGPIQLSWN 185

Query: 181 FNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALE 240
           FNYGPAGESIGFDGLN+P+ VAT+PL+SFKTALWYWMNFVRPVI+QGFGATIRAINGALE
Sbjct: 186 FNYGPAGESIGFDGLNSPDTVATDPLISFKTALWYWMNFVRPVIDQGFGATIRAINGALE 245

Query: 241 CDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           CDG N ATVQ RV+YYT+YC+QLGVAPGDNLTC
Sbjct: 246 CDGGNPATVQARVQYYTEYCSQLGVAPGDNLTC 275

[Close]
BLAST of CmoCh13G005480 vs. TAIR10
Match: AT3G54420.1 (AT3G54420.1 homolog of carrot EP3-3 chitinase)

HSP 1 Score: 415.2 bits (1066), Expect = 3.0e-116
Identity = 186/249 (74.70%), Postives = 213/249 (85.54%), Query Frame = 1 

Query: 20  AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVNDVVVADFVTEEFFNGI 79
           AQNCGC++ LCCS+FGFCG  +D+CG GC++GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 80  INQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAAFFGHVTHETGHLCFIE 139
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFF HVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 140 EIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGESIGFDGLNNPEIVATN 199
           EIDGA+KDYCDE+ TQYPCNP+KGY+GRGPIQLSWNFNYGPAG +IGFDGLN PE VAT+
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 200 PLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSATVQRRVEYYTQYCNQLG 259
           P++SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN+ATVQ RV YYT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 260 VAPGDNLTC 269
           V PG+NLTC
Sbjct: 268 VDPGNNLTC 273

[Close]
BLAST of CmoCh13G005480 vs. TAIR10
Match: AT2G43590.1 (AT2G43590.1 Chitinase family protein)

HSP 1 Score: 325.5 bits (833), Expect = 3.1e-89
Identity = 154/266 (57.89%), Postives = 190/266 (71.43%), Query Frame = 1 

Query: 4   ALLLTVTLVGIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSV 63
           +L+L + L+G  +    +QNCGCA  LCCS+FG+CGT + +CG GCR GPC     TP+ 
Sbjct: 7   SLVLLLCLLGFFSETVKSQNCGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGSG-TPTG 66

Query: 64  NDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIA 123
             V     VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    SV  ++REIA
Sbjct: 67  GSV--GSIVTQGFFNNIINQAGNGCAGKRFYTRDSFVNAANTFPNFAN--SV--TRREIA 126

Query: 124 AFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAG 183
             F H THETGH C+IEEI+GAT++YC   NTQYPC P KGYFGRGPIQLSWN+NYG  G
Sbjct: 127 TMFAHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACG 186

Query: 184 ESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSA 243
           +S+G D L  PE+V +NP V+F+T LW+WMN VRPV+NQGFGATIRAING +EC+G NS 
Sbjct: 187 QSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSG 246

Query: 244 TVQRRVEYYTQYCNQLGVAPGDNLTC 269
            V  R+ YY  YC QLGV PG NL+C
Sbjct: 247 AVNARIGYYRDYCGQLGVDPGPNLSC 264

[Close]
BLAST of CmoCh13G005480 vs. TAIR10
Match: AT2G43580.1 (AT2G43580.1 Chitinase family protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-83
Identity = 140/265 (52.83%), Postives = 187/265 (70.57%), Query Frame = 1 

Query: 5   LLLTVTLVGIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVN 64
           L+L ++L+G+ +    +QNC CA  LCCS+FG+CGT  D+CG+ C+ GPC +    P   
Sbjct: 8   LILLLSLLGLYSETVKSQNCDCAPNLCCSQFGYCGTTADYCGSTCQSGPCRVGG--PPTG 67

Query: 65  DVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAA 124
             +V + VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    +    +REIA 
Sbjct: 68  AGLVGNIVTQIFFNNIINQAGNGCAGKSFYTRDSFINATNTFPSFANTVT----RREIAT 127

Query: 125 FFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGE 184
            F H T+ETGH C+IEEI+GA++  CD++N QYPC P+K Y GRGP+ LSWNFNYG  G+
Sbjct: 128 MFAHFTYETGHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQ 187

Query: 185 SIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSAT 244
           S+G D L  PE+V++NP+V+F+TALW+WM  VRPV+NQGFGATIRAI+G  +CDG N   
Sbjct: 188 SLGLDLLRQPELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDCDGRNLGG 247

Query: 245 VQRRVEYYTQYCNQLGVAPGDNLTC 269
           V  R+ YY  YC QLG+ PG N+TC
Sbjct: 248 VNARIGYYRDYCGQLGLDPGANITC 265

[Close]
BLAST of CmoCh13G005480 vs. TAIR10
Match: AT2G43570.1 (AT2G43570.1 chitinase, putative)

HSP 1 Score: 261.9 bits (668), Expect = 4.2e-70
Identity = 133/277 (48.01%), Postives = 178/277 (64.26%), Query Frame = 1 

Query: 3   RALLLTVTLVGIIAGA----AAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPL 62
           R  L  +TL+ +I       A+QNCGCA+  CCS++G+CGT ++FCG GC+ GPC     
Sbjct: 10  RFALFFITLIFLILTVSKPVASQNCGCASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGG 69

Query: 63  --TPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDD 122
              P+V+   +   VT +FFN I+NQ    C G+GFY+  TF+ A  S+  FG       
Sbjct: 70  GGDPAVS---LEGTVTPDFFNSILNQR-GDCPGKGFYTHDTFMAAANSYPSFG----ASI 129

Query: 123 SKREIAAFFGHVTHETGHLCFIEEIDGATK----DYCDEDNTQYPCNPSKGYFGRGPIQL 182
           SKREIAAFF HV  ETG +C+IEEIDG  K    +YCD +  ++PC   KGY+GRG IQL
Sbjct: 130 SKREIAAFFAHVAQETGFMCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQL 189

Query: 183 SWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAING 242
           SWN+NYG  G+++  + L +PE VA + +++FKTA W+W   VR     GFGATIRA+N 
Sbjct: 190 SWNYNYGLCGKALDENLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVN- 249

Query: 243 ALECDGANS-ATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           + EC G +S A    R++Y+  YC +LGVAPGDNLTC
Sbjct: 250 SRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277

[Close]
BLAST of CmoCh13G005480 vs. TAIR10
Match: AT2G43610.1 (AT2G43610.1 Chitinase family protein)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-68
Identity = 128/282 (45.39%), Postives = 182/282 (64.54%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAGAA-AQNCG---CAAGLCCSRFGFCGTGNDFCGTGCREGPCNIP 60
           +++AL++ +  + I+ G A +QNCG   C   +CCSR+G+CGT   +CGTGC+ GPCN  
Sbjct: 8   LKKALIIFLFTLTIMTGTAFSQNCGTNGCKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSK 67

Query: 61  PL---TPSVNDVV-------VADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFD 120
           P    TPS +  +       +A  +T  FFN I+++  +GC  +GFY+R  F+ A +SF 
Sbjct: 68  PKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFA 127

Query: 121 RFGRIGSVDDSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFG 180
            +   G+V  +KREIAA     +HE+G  C+ EEI  A   YC   +T YPC P K Y+G
Sbjct: 128 AYK--GTV--AKREIAAMLAQFSHESGSFCYKEEI--ARGRYC-SPSTTYPCQPGKNYYG 187

Query: 181 RGPIQLSWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGAT 240
           RGPIQ++WN+NYG AG+ +G   L +P++VA +P V+F+ A+W+W   VRPV++QGFGAT
Sbjct: 188 RGPIQITWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFQCAMWFWNKNVRPVLSQGFGAT 247

Query: 241 IRAINGALECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
            R ING  EC+G   A VQ RV +Y  +C +LGV PG NL+C
Sbjct: 248 TRRINGG-ECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281

[Close]
BLAST of CmoCh13G005480 vs. NCBI nr
Match: gi|449454971|ref|XP_004145227.1| (PREDICTED: endochitinase PR4-like [Cucumis sativus])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 245/269 (91.08%), Postives = 260/269 (96.65%), Query Frame = 1 

Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT + L+GIIAGAAAQNCGCAAGLCCSRFGFCG G DFCGTGCREGPCNIPPLT
Sbjct: 10  MQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPPLT 69

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEALQSFDRFGRIGSV+DSKR
Sbjct: 70  PSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDSKR 129

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGHLCFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 130 EIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 189

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 190 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 249

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRR+++Y QYCNQL VAPG+NLTC
Sbjct: 250 NTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

[Close]
BLAST of CmoCh13G005480 vs. NCBI nr
Match: gi|659068474|ref|XP_008444611.1| (PREDICTED: endochitinase PR4-like [Cucumis melo])

HSP 1 Score: 530.0 bits (1364), Expect = 2.4e-147
Identity = 246/269 (91.45%), Postives = 258/269 (95.91%), Query Frame = 1 

Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT V L+GIIAGAAAQNCGCAAGLCCSRFGFCGTG DFCGTGCREGPCNIPPLT
Sbjct: 7   MQKTLLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGEDFCGTGCREGPCNIPPLT 66

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIINQADA CAGRGFYSRATFLEALQSFDRFGRIG+VDDSKR
Sbjct: 67  PSVNDVNVAEFVTEEFFNGIINQADASCAGRGFYSRATFLEALQSFDRFGRIGTVDDSKR 126

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGH CFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 127 EIAAFFAHVTHETGHFCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 186

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 187 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 246

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRRV++Y QYCNQL V PG+NLTC
Sbjct: 247 NTATVQRRVQFYNQYCNQLNVDPGNNLTC 275

[Close]
BLAST of CmoCh13G005480 vs. NCBI nr
Match: gi|222139394|gb|ACM45716.1| (class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia])

HSP 1 Score: 460.3 bits (1183), Expect = 2.3e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1 

Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of CmoCh13G005480 vs. NCBI nr
Match: gi|657955457|ref|XP_008369197.1| (PREDICTED: endochitinase PR4-like [Malus domestica])

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-125
Identity = 208/269 (77.32%), Postives = 239/269 (88.85%), Query Frame = 1 

Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA  CCS++G+CGT + +CGTGC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADQCCSQYGYCGTDDAYCGTGCKSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS +DVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+ +FGRIGS+DDSKR
Sbjct: 64  PSTSDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYTQFGRIGSIDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDETNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQRRVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQRRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of CmoCh13G005480 vs. NCBI nr
Match: gi|590654799|ref|XP_007033803.1| (Carrot EP3-3 chitinase [Theobroma cacao])

HSP 1 Score: 455.3 bits (1170), Expect = 7.4e-125
Identity = 209/271 (77.12%), Postives = 236/271 (87.08%), Query Frame = 1 

Query: 1   MQRALLLTVTLVGIIAGAA---AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M R  LL + L GIIAGAA   AQNCGCA GLCCSR+GFCGTG+DFCGTGC+EGPCN PP
Sbjct: 6   MIRKGLLAIVLAGIIAGAAPVKAQNCGCAEGLCCSRWGFCGTGDDFCGTGCQEGPCNPPP 65

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
              ++N+V VAD VT +FFNGI+++A+A C G+ FYSRA FLEAL S+ +FGRIGS+DDS
Sbjct: 66  ---TLNNVSVADIVTPQFFNGILDEAEASCEGKNFYSRAAFLEALNSYPQFGRIGSIDDS 125

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFN 180
           KREIAAFFGHVTHETGH CFIEEI+G T+DYCDE +TQYPCNP KGY+GRGPIQLSWNFN
Sbjct: 126 KREIAAFFGHVTHETGHFCFIEEINGTTRDYCDESSTQYPCNPDKGYYGRGPIQLSWNFN 185

Query: 181 YGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 240
           YGPAGESIGFDGLN+PE VAT+P++SFKTALWYW+NFV+PVI QGFGATIRAINGALECD
Sbjct: 186 YGPAGESIGFDGLNSPETVATDPVISFKTALWYWVNFVQPVIGQGFGATIRAINGALECD 245

Query: 241 GANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           G N ATVQ R+EYYT YCNQLGV PG NLTC
Sbjct: 246 GGNPATVQARIEYYTDYCNQLGVDPGANLTC 273

The following BLAST results are available for this feature:
BLAST of CmoCh13G005480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHI5_ARATH5.3e-11574.70Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1[more]
CHI4_PHAVU2.2e-10867.65Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1[more]
CHI6_ORYSJ1.7e-9760.36Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1[more]
CHI5_ORYSJ2.2e-9257.97Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1[more]
CHI4_ORYSJ2.4e-9158.21Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2[more]
BLAST of CmoCh13G005480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXT8_CUCSA7.4e-14891.08Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1[more]
B9VQ34_PYRPY1.6e-12677.70Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1[more]
A0A077GZM8_9ROSA1.6e-12677.70Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1[more]
A0A061ER07_THECC5.2e-12577.12Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1[more]
A0A059DAK6_EUCGR2.2e-12375.82Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1[more]
BLAST of CmoCh13G005480 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54420.13.0e-11674.70 homolog of carrot EP3-3 chitinase[more]
AT2G43590.13.1e-8957.89 Chitinase family protein[more]
AT2G43580.13.3e-8352.83 Chitinase family protein[more]
AT2G43570.14.2e-7048.01 chitinase, putative[more]
AT2G43610.13.0e-6845.39 Chitinase family protein[more]
BLAST of CmoCh13G005480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454971|ref|XP_004145227.1|1.1e-14791.08PREDICTED: endochitinase PR4-like [Cucumis sativus][more]
gi|659068474|ref|XP_008444611.1|2.4e-14791.45PREDICTED: endochitinase PR4-like [Cucumis melo][more]
gi|222139394|gb|ACM45716.1|2.3e-12677.70class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia][more]
gi|657955457|ref|XP_008369197.1|1.1e-12577.32PREDICTED: endochitinase PR4-like [Malus domestica][more]
gi|590654799|ref|XP_007033803.1|7.4e-12577.12Carrot EP3-3 chitinase [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000726Glyco_hydro_19_cat
IPR001002Chitin-bd_1
IPR016283Glyco_hydro_19
IPR018371Chitin-binding_1_CS
IPR023346Lysozyme-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004568chitinase activity
GO:0008061chitin binding
Vocabulary: Biological Process
TermDefinition
GO:0006032chitin catabolic process
GO:0016998cell wall macromolecule catabolic process
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
biological_process GO:0009617 response to bacterium
biological_process GO:0009611 response to wounding
biological_process GO:0010262 somatic embryogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005618 cell wall
molecular_function GO:0004568 chitinase activity
molecular_function GO:0008061 chitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G005480.1CmoCh13G005480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000726Glycoside hydrolase, family 19, catalyticPFAMPF00182Glyco_hydro_19coord: 71..268
score: 1.1
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00773CHITINASE_19_1coord: 87..109
scor
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00774CHITINASE_19_2coord: 202..212
scor
IPR001002Chitin-binding, type 1PRODOMPD000609coord: 32..54
score: 0
IPR001002Chitin-binding, type 1GENE3DG3DSA:3.30.60.10coord: 17..60
score: 8.3
IPR001002Chitin-binding, type 1PFAMPF00187Chitin_bind_1coord: 17..53
score: 3.
IPR001002Chitin-binding, type 1SMARTSM00270ChitinBD_3coord: 22..53
score: 3.
IPR001002Chitin-binding, type 1PROFILEPS50941CHIT_BIND_I_2coord: 20..55
score: 9
IPR001002Chitin-binding, type 1unknownSSF57016Plant lectins/antimicrobial peptidescoord: 16..58
score: 3.93
IPR016283Glycoside hydrolase, family 19PIRPIRSF001060Endochitinasecoord: 1..268
score: 3.8E
IPR018371Chitin-binding, type 1, conserved sitePROSITEPS00026CHIT_BIND_I_1coord: 25..44
scor
IPR023346Lysozyme-like domainunknownSSF53955Lysozyme-likecoord: 67..268
score: 1.04
NoneNo IPR availableGENE3DG3DSA:1.10.530.10coord: 197..268
score: 2.4E-53coord: 69..134
score: 2.4
NoneNo IPR availableGENE3DG3DSA:3.30.20.10coord: 145..196
score: 3.5
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 3..268
score: 3.2E
NoneNo IPR availablePANTHERPTHR22595:SF61SUBFAMILY NOT NAMEDcoord: 3..268
score: 3.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G005480Cucsa.152090Cucumber (Gy14) v1cgycmoB0419
CmoCh13G005480CmaCh13G005180Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G005480Cla019559Watermelon (97103) v1cmowmB174
CmoCh13G005480Csa1G534750Cucumber (Chinese Long) v2cmocuB205
CmoCh13G005480MELO3C002759Melon (DHL92) v3.5.1cmomeB179
CmoCh13G005480ClCG03G006570Watermelon (Charleston Gray)cmowcgB185
CmoCh13G005480CSPI01G24500Wild cucumber (PI 183967)cmocpiB207
CmoCh13G005480Lsi02G009130Bottle gourd (USVL1VR-Ls)cmolsiB197
CmoCh13G005480Cp4.1LG20g05350Cucurbita pepo (Zucchini)cmocpeB201
CmoCh13G005480MELO3C002759.2Melon (DHL92) v3.6.1cmomedB201
CmoCh13G005480CsaV3_1G036780Cucumber (Chinese Long) v3cmocucB0237
CmoCh13G005480Cla97C03G057860Watermelon (97103) v2cmowmbB210
CmoCh13G005480Bhi08G001662Wax gourdcmowgoB0244
CmoCh13G005480CsGy1G023960Cucumber (Gy14) v2cgybcmoB070
CmoCh13G005480Carg25448Silver-seed gourdcarcmoB0290
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G005480Cucurbita maxima (Rimu)cmacmoB398
CmoCh13G005480Cucurbita maxima (Rimu)cmacmoB638
CmoCh13G005480Cucurbita maxima (Rimu)cmacmoB847
CmoCh13G005480Wild cucumber (PI 183967)cmocpiB218
CmoCh13G005480Cucumber (Chinese Long) v2cmocuB215
CmoCh13G005480Melon (DHL92) v3.5.1cmomeB195
CmoCh13G005480Watermelon (Charleston Gray)cmowcgB176
CmoCh13G005480Watermelon (97103) v1cmowmB188
CmoCh13G005480Cucurbita pepo (Zucchini)cmocpeB182
CmoCh13G005480Cucurbita pepo (Zucchini)cmocpeB186
CmoCh13G005480Cucurbita pepo (Zucchini)cmocpeB199
CmoCh13G005480Bottle gourd (USVL1VR-Ls)cmolsiB189
CmoCh13G005480Cucumber (Gy14) v2cgybcmoB708
CmoCh13G005480Melon (DHL92) v3.6.1cmomedB217
CmoCh13G005480Silver-seed gourdcarcmoB0406
CmoCh13G005480Silver-seed gourdcarcmoB0569
CmoCh13G005480Silver-seed gourdcarcmoB0993
CmoCh13G005480Cucumber (Chinese Long) v3cmocucB0254
CmoCh13G005480Watermelon (97103) v2cmowmbB196
CmoCh13G005480Wax gourdcmowgoB0241
CmoCh13G005480Cucurbita moschata (Rifu)cmocmoB170
CmoCh13G005480Cucurbita moschata (Rifu)cmocmoB183
CmoCh13G005480Cucurbita moschata (Rifu)cmocmoB190
CmoCh13G005480Cucumber (Gy14) v1cgycmoB0033