CmoCh13G005480.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G005480.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Chitinase family protein
Location	Cmo_Chr13 : 6332976 .. 6334876 (-)
Sequence length	910

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACGTAAGTATTCTCTGTTAAGAATTATTGAAAGAAATAGTCTCATATTAACTAATTATTATAAGGATTGTTGGGAGGATGTTCGACCTTGACTAATTAACTAGATGATCATGATTTTATTAACAAGAAATACATCTCCATAATGCCTATTGGGGAATCAAAAGGCTTCATGGCTTTGAGCGTAAGCTCTCATAAACTTTGTTTTTGGTTTCTCCAAAAAGTCTCATGAACACGCATTCCTTGATTATAAACGCATGATCATTCCTTAAATTAGCGTATGTGGGACTCCCTCCCAACAATCCTCAACATATCATTCCATTGTGAAGAGTCGTAGTTTCTAACATTCTCTCTCCTCATCCCCTCCCAGCTACATCTCTGAAACTAAGATGGACTCATGAATTTTTGTGGAGAGTCGAGGATAATATCATATCATTGTGGATAGTCGTGGTTCCTAATATCTCTAAAACTAAGATGAACCCATGAATTTTTGTGGAGAGTCGTGGTGAACCCATGAATTTTTGTGGGGAGCAGTGGACAATATCATATTATTGTAGAGAGTTGTAGTTCCTAACATCTCTAAAACTAAGATGAACCCATGAATTTTTGTAGAGAGTCGTGGTGAACCCATGAATTTTTGTGGGAAGTCGTGGTGAACCCATAAATTTTTGTGGGGAGCCGTGGACAGCATTATATCATTGTAGAGAGTCGTGATTTCTAATATCTCTAAAACTAAGACGAACCCATGAATTTTTGTGGAGAGTCATAGTGAACCCATGAATTTTTGTGGGAAGTCACGGAAAACCCATAAATTTTTGTGGGGAGCAATGGACAGTAATATATCATTGTAGAGAGTCGTGGTCCTTAATATCTCTAAAACCAAGATGAACCCATGAATTTTTGTGGAGAGTCGTAGTGAACCCATGAATTTTTGTGGGGTATCATTGTAGAGAGTCTAGTAGTTTCATAAACTTAATTTTTGTGTGTTTGTATGCAGATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAGAACATTAATTAAGTTTCTTAATTGTGTTAGAACATTAATAAATTTGTATGATCCATACAATCCATACCATATATATAATGATATTTTATTTCATATCTCAAAA

mRNA sequence

ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAGAACATTAATTAAGTTTCTTAATTGTGTTAGAACATTAATAAATTTGTATGATCCATACAATCCATACCATATATATAATGATATTTTATTTCATATCTCAAAA

Coding sequence (CDS)

ATGCAAAGGGCACTGCTATTAACGGTGACTTTGGTCGGAATCATCGCCGGAGCAGCGGCGCAGAACTGCGGCTGCGCGGCAGGGCTGTGCTGCAGCAGGTTTGGATTCTGCGGCACCGGCAATGATTTCTGCGGGACAGGATGCAGAGAAGGCCCCTGCAACATCCCGCCTCTTACCCCTAGTGTGAACGACGTCGTTGTGGCTGATTTCGTGACGGAGGAGTTCTTCAACGGCATTATTAACCAGGCGGATGCTGGTTGCGCCGGTCGGGGATTCTACAGCAGAGCAACTTTCCTTGAAGCCCTCCAATCGTTTGACCGATTTGGAAGAATCGGGTCCGTTGACGATTCGAAGAGAGAAATCGCCGCCTTCTTCGGCCATGTTACTCACGAGACTGGACATTTGTGCTTCATTGAAGAAATAGATGGGGCAACAAAGGATTACTGCGACGAAGATAACACCCAATATCCGTGCAACCCAAGCAAGGGGTATTTCGGGAGAGGCCCAATCCAGCTATCCTGGAACTTCAACTACGGGCCCGCAGGGGAGAGCATCGGGTTCGATGGGCTCAACAACCCAGAAATAGTGGCAACCAACCCCCTGGTGTCCTTCAAGACCGCTCTGTGGTACTGGATGAACTTCGTGAGGCCGGTCATAAACCAGGGCTTCGGCGCCACCATTCGGGCCATCAATGGCGCCCTGGAATGCGACGGCGCTAACTCTGCCACCGTTCAACGACGGGTCGAGTACTACACTCAGTACTGTAACCAACTCGGAGTTGCCCCCGGAGATAATTTGACTTGTTAG

Homology

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BLAST of CmoCh13G005480.1 vs. Swiss-Prot
Match: CHI5_ARATH (Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 5.3e-115
Identity = 186/249 (74.70%), Postives = 213/249 (85.54%), Query Frame = 1


Query: 20  AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVNDVVVADFVTEEFFNGI 79
           AQNCGC++ LCCS+FGFCG  +D+CG GC++GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 80  INQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAAFFGHVTHETGHLCFIE 139
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFF HVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 140 EIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGESIGFDGLNNPEIVATN 199
           EIDGA+KDYCDE+ TQYPCNP+KGY+GRGPIQLSWNFNYGPAG +IGFDGLN PE VAT+
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 200 PLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSATVQRRVEYYTQYCNQLG 259
           P++SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN+ATVQ RV YYT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 260 VAPGDNLTC 269
           V PG+NLTC
Sbjct: 268 VDPGNNLTC 273

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BLAST of CmoCh13G005480.1 vs. Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.2e-108
Identity = 184/272 (67.65%), Postives = 213/272 (78.31%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAG---AAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M   L+L +  V ++ G    +AQNCGCA GLCCS++G+CGTG D+CGTGC++GPC    
Sbjct: 1   MGNKLVLVLVAVALVMGPKNVSAQNCGCAEGLCCSQYGYCGTGEDYCGTGCQQGPCTTAS 60

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
             PS N  V AD +T +F NGII+QAD+GCAG+ FY+R  FL AL S+  FGR+GS DDS
Sbjct: 61  PPPSNN--VNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDS 120

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDN-TQYPCNPSKGYFGRGPIQLSWNF 180
           KREIAA F H THETGH C+IEEIDGA+KDYCDE++  QYPC+ SKGY GRGPIQLSWNF
Sbjct: 121 KREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNF 180

Query: 181 NYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 240
           NYGPAG +  FDGL  PE V+ + +VSFKTALWYWM  VRPVINQGFGATIRAINGALEC
Sbjct: 181 NYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALEC 240

Query: 241 DGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           DGAN  TVQ RV YYT+YC QLGVA GDNLTC
Sbjct: 241 DGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270

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BLAST of CmoCh13G005480.1 vs. Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.7e-97
Identity = 166/275 (60.36%), Postives = 202/275 (73.45%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAG-----AAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNI 60
           M R L L   ++ ++A      AAAQ+CGCA+  CCS++GFCGTG+D+CGTGC+ GPC++
Sbjct: 1   MARRLSLLAVVLAMVAAVSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDV 60

Query: 61  PPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVD 120
           P    + NDV VA  VT EFF  ++ QAD GCA +GFY+R  FL A   +  FGR GSVD
Sbjct: 61  P----ATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVD 120

Query: 121 DSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWN 180
           DSKREIAAFF H  HET   C+IEEIDG +K+YCDE +TQ+PC   KGY+GRGP+Q+SWN
Sbjct: 121 DSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWN 180

Query: 181 FNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRP--VINQGFGATIRAINGA 240
           FNYGPAG+SIGFDGL +P+ VA +P+++F+TALWYW N V    V  QGFGATIRAINGA
Sbjct: 181 FNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGA 240

Query: 241 LECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           LECDG N   V  RV YY Q+C Q GV PG NLTC
Sbjct: 241 LECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271

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BLAST of CmoCh13G005480.1 vs. Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-92
Identity = 160/276 (57.97%), Postives = 194/276 (70.29%), Query Frame = 1


Query: 4   ALLLTVTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPC---------- 63
           ALLL+ T       A+AQNCGC + +CCS++G+CGTG D+CG GCR GPC          
Sbjct: 18  ALLLSAT-----GQASAQNCGCQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGG 77

Query: 64  -NIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIG 123
                     + V V   VTE FFNGI NQA  GCAG+ FY+R +FL A  S+  F R  
Sbjct: 78  GGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDR 137

Query: 124 SVDDSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQL 183
           + DDSKREIAAFF HVTHETGH+C+I EI+GA+ DYCD++N Q+PC P K Y+GRGP+Q+
Sbjct: 138 TNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQI 197

Query: 184 SWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAING 243
           SWN+NYGPAG++IGFDGL +P+ VA +P +SFKTALW+WMN V  V+ QGFGATIRAING
Sbjct: 198 SWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAING 257

Query: 244 ALECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           ALEC+G N   V  RV YY  YC Q GV PG NL C
Sbjct: 258 ALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288

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BLAST of CmoCh13G005480.1 vs. Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 2.4e-91
Identity = 156/268 (58.21%), Postives = 188/268 (70.15%), Query Frame = 1


Query: 11  LVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPC----------NIPPLTP 70
           L+   A AAAQNCGC  G CCS++G+CGT   +CG GC+ GPC                 
Sbjct: 18  LLSAAAPAAAQNCGCQDGYCCSQWGYCGTTEAYCGQGCQSGPCWGSGGEAAAGMAGRKAG 77

Query: 71  SVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKRE 130
           +   V V   VTE FFNGI NQA  GCAG+ FY+R +FL A +S+  F    + DDSKRE
Sbjct: 78  AGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKRE 137

Query: 131 IAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGP 190
           IAAFF HVTHETGH+C+I EI+GA  DYCD+ N Q+PC P K Y+GRGP+Q+SWNFNYGP
Sbjct: 138 IAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGP 197

Query: 191 AGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGAN 250
           AG++IGFDGL +P+ VA +P +SFKTALW+WMN V  V++QGFGATIRAINGALEC+G N
Sbjct: 198 AGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKN 257

Query: 251 SATVQRRVEYYTQYCNQLGVAPGDNLTC 269
              V  RV YY  YC Q GV+PG NL C
Sbjct: 258 PGAVNARVNYYKDYCRQFGVSPGGNLYC 285

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BLAST of CmoCh13G005480.1 vs. TrEMBL
Match: A0A0A0LXT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 7.4e-148
Identity = 245/269 (91.08%), Postives = 260/269 (96.65%), Query Frame = 1


Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT + L+GIIAGAAAQNCGCAAGLCCSRFGFCG G DFCGTGCREGPCNIPPLT
Sbjct: 10  MQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPPLT 69

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEALQSFDRFGRIGSV+DSKR
Sbjct: 70  PSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDSKR 129

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGHLCFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 130 EIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 189

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 190 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 249

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRR+++Y QYCNQL VAPG+NLTC
Sbjct: 250 NTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

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BLAST of CmoCh13G005480.1 vs. TrEMBL
Match: B9VQ34_PYRPY (Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1


Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]

BLAST of CmoCh13G005480.1 vs. TrEMBL
Match: A0A077GZM8_9ROSA (Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1


Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]

BLAST of CmoCh13G005480.1 vs. TrEMBL
Match: A0A061ER07_THECC (Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.2e-125
Identity = 209/271 (77.12%), Postives = 236/271 (87.08%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAGAA---AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M R  LL + L GIIAGAA   AQNCGCA GLCCSR+GFCGTG+DFCGTGC+EGPCN PP
Sbjct: 6   MIRKGLLAIVLAGIIAGAAPVKAQNCGCAEGLCCSRWGFCGTGDDFCGTGCQEGPCNPPP 65

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
              ++N+V VAD VT +FFNGI+++A+A C G+ FYSRA FLEAL S+ +FGRIGS+DDS
Sbjct: 66  ---TLNNVSVADIVTPQFFNGILDEAEASCEGKNFYSRAAFLEALNSYPQFGRIGSIDDS 125

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFN 180
           KREIAAFFGHVTHETGH CFIEEI+G T+DYCDE +TQYPCNP KGY+GRGPIQLSWNFN
Sbjct: 126 KREIAAFFGHVTHETGHFCFIEEINGTTRDYCDESSTQYPCNPDKGYYGRGPIQLSWNFN 185

Query: 181 YGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 240
           YGPAGESIGFDGLN+PE VAT+P++SFKTALWYW+NFV+PVI QGFGATIRAINGALECD
Sbjct: 186 YGPAGESIGFDGLNSPETVATDPVISFKTALWYWVNFVQPVIGQGFGATIRAINGALECD 245

Query: 241 GANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           G N ATVQ R+EYYT YCNQLGV PG NLTC
Sbjct: 246 GGNPATVQARIEYYTDYCNQLGVDPGANLTC 273

[Close]

BLAST of CmoCh13G005480.1 vs. TrEMBL
Match: A0A059DAK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-123
Identity = 207/273 (75.82%), Postives = 235/273 (86.08%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAGA-----AAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNI 60
           +++ LL  V + GII  A     +AQNCGCAA  CCSR+G+CGTG+D+CGTGC+EGPCN 
Sbjct: 6   LRKLLLTAVAVAGIIISALPDTTSAQNCGCAADQCCSRWGYCGTGDDYCGTGCQEGPCNA 65

Query: 61  PPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVD 120
           PP T   NDVVVAD VTE FF+GII QA   C G+GFYSR TFLEA  S+ +FGR+GSVD
Sbjct: 66  PPPT---NDVVVADVVTEAFFDGIIGQAAESCEGKGFYSRGTFLEAAGSYPQFGRVGSVD 125

Query: 121 DSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWN 180
           DSKREIAAFF HVTHETGH C+I EIDGA+KDYCDE NTQYPC+P+KGY+GRGPIQLSWN
Sbjct: 126 DSKREIAAFFAHVTHETGHFCYINEIDGASKDYCDETNTQYPCSPNKGYYGRGPIQLSWN 185

Query: 181 FNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALE 240
           FNYGPAGESIGFDGLN+P+ VAT+PL+SFKTALWYWMNFVRPVI+QGFGATIRAINGALE
Sbjct: 186 FNYGPAGESIGFDGLNSPDTVATDPLISFKTALWYWMNFVRPVIDQGFGATIRAINGALE 245

Query: 241 CDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           CDG N ATVQ RV+YYT+YC+QLGVAPGDNLTC
Sbjct: 246 CDGGNPATVQARVQYYTEYCSQLGVAPGDNLTC 275

[Close]

BLAST of CmoCh13G005480.1 vs. TAIR10
Match: AT3G54420.1 (AT3G54420.1 homolog of carrot EP3-3 chitinase)

HSP 1 Score: 415.2 bits (1066), Expect = 3.0e-116
Identity = 186/249 (74.70%), Postives = 213/249 (85.54%), Query Frame = 1


Query: 20  AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVNDVVVADFVTEEFFNGI 79
           AQNCGC++ LCCS+FGFCG  +D+CG GC++GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 80  INQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAAFFGHVTHETGHLCFIE 139
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFF HVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 140 EIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGESIGFDGLNNPEIVATN 199
           EIDGA+KDYCDE+ TQYPCNP+KGY+GRGPIQLSWNFNYGPAG +IGFDGLN PE VAT+
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 200 PLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSATVQRRVEYYTQYCNQLG 259
           P++SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN+ATVQ RV YYT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 260 VAPGDNLTC 269
           V PG+NLTC
Sbjct: 268 VDPGNNLTC 273

[Close]

BLAST of CmoCh13G005480.1 vs. TAIR10
Match: AT2G43590.1 (AT2G43590.1 Chitinase family protein)

HSP 1 Score: 325.5 bits (833), Expect = 3.1e-89
Identity = 154/266 (57.89%), Postives = 190/266 (71.43%), Query Frame = 1


Query: 4   ALLLTVTLVGIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSV 63
           +L+L + L+G  +    +QNCGCA  LCCS+FG+CGT + +CG GCR GPC     TP+ 
Sbjct: 7   SLVLLLCLLGFFSETVKSQNCGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGSG-TPTG 66

Query: 64  NDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIA 123
             V     VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    SV  ++REIA
Sbjct: 67  GSV--GSIVTQGFFNNIINQAGNGCAGKRFYTRDSFVNAANTFPNFAN--SV--TRREIA 126

Query: 124 AFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAG 183
             F H THETGH C+IEEI+GAT++YC   NTQYPC P KGYFGRGPIQLSWN+NYG  G
Sbjct: 127 TMFAHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACG 186

Query: 184 ESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSA 243
           +S+G D L  PE+V +NP V+F+T LW+WMN VRPV+NQGFGATIRAING +EC+G NS 
Sbjct: 187 QSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSG 246

Query: 244 TVQRRVEYYTQYCNQLGVAPGDNLTC 269
            V  R+ YY  YC QLGV PG NL+C
Sbjct: 247 AVNARIGYYRDYCGQLGVDPGPNLSC 264

[Close]

BLAST of CmoCh13G005480.1 vs. TAIR10
Match: AT2G43580.1 (AT2G43580.1 Chitinase family protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.3e-83
Identity = 140/265 (52.83%), Postives = 187/265 (70.57%), Query Frame = 1


Query: 5   LLLTVTLVGIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLTPSVN 64
           L+L ++L+G+ +    +QNC CA  LCCS+FG+CGT  D+CG+ C+ GPC +    P   
Sbjct: 8   LILLLSLLGLYSETVKSQNCDCAPNLCCSQFGYCGTTADYCGSTCQSGPCRVGG--PPTG 67

Query: 65  DVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKREIAA 124
             +V + VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    +    +REIA 
Sbjct: 68  AGLVGNIVTQIFFNNIINQAGNGCAGKSFYTRDSFINATNTFPSFANTVT----RREIAT 127

Query: 125 FFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYGPAGE 184
            F H T+ETGH C+IEEI+GA++  CD++N QYPC P+K Y GRGP+ LSWNFNYG  G+
Sbjct: 128 MFAHFTYETGHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQ 187

Query: 185 SIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANSAT 244
           S+G D L  PE+V++NP+V+F+TALW+WM  VRPV+NQGFGATIRAI+G  +CDG N   
Sbjct: 188 SLGLDLLRQPELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDCDGRNLGG 247

Query: 245 VQRRVEYYTQYCNQLGVAPGDNLTC 269
           V  R+ YY  YC QLG+ PG N+TC
Sbjct: 248 VNARIGYYRDYCGQLGLDPGANITC 265

[Close]

BLAST of CmoCh13G005480.1 vs. TAIR10
Match: AT2G43570.1 (AT2G43570.1 chitinase, putative)

HSP 1 Score: 261.9 bits (668), Expect = 4.2e-70
Identity = 133/277 (48.01%), Postives = 178/277 (64.26%), Query Frame = 1


Query: 3   RALLLTVTLVGIIAGA----AAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPL 62
           R  L  +TL+ +I       A+QNCGCA+  CCS++G+CGT ++FCG GC+ GPC     
Sbjct: 10  RFALFFITLIFLILTVSKPVASQNCGCASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGG 69

Query: 63  --TPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDD 122
              P+V+   +   VT +FFN I+NQ    C G+GFY+  TF+ A  S+  FG       
Sbjct: 70  GGDPAVS---LEGTVTPDFFNSILNQR-GDCPGKGFYTHDTFMAAANSYPSFG----ASI 129

Query: 123 SKREIAAFFGHVTHETGHLCFIEEIDGATK----DYCDEDNTQYPCNPSKGYFGRGPIQL 182
           SKREIAAFF HV  ETG +C+IEEIDG  K    +YCD +  ++PC   KGY+GRG IQL
Sbjct: 130 SKREIAAFFAHVAQETGFMCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQL 189

Query: 183 SWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAING 242
           SWN+NYG  G+++  + L +PE VA + +++FKTA W+W   VR     GFGATIRA+N 
Sbjct: 190 SWNYNYGLCGKALDENLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVN- 249

Query: 243 ALECDGANS-ATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           + EC G +S A    R++Y+  YC +LGVAPGDNLTC
Sbjct: 250 SRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277

[Close]

BLAST of CmoCh13G005480.1 vs. TAIR10
Match: AT2G43610.1 (AT2G43610.1 Chitinase family protein)

HSP 1 Score: 255.8 bits (652), Expect = 3.0e-68
Identity = 128/282 (45.39%), Postives = 182/282 (64.54%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAGAA-AQNCG---CAAGLCCSRFGFCGTGNDFCGTGCREGPCNIP 60
           +++AL++ +  + I+ G A +QNCG   C   +CCSR+G+CGT   +CGTGC+ GPCN  
Sbjct: 8   LKKALIIFLFTLTIMTGTAFSQNCGTNGCKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSK 67

Query: 61  PL---TPSVNDVV-------VADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFD 120
           P    TPS +  +       +A  +T  FFN I+++  +GC  +GFY+R  F+ A +SF 
Sbjct: 68  PKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFA 127

Query: 121 RFGRIGSVDDSKREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFG 180
            +   G+V  +KREIAA     +HE+G  C+ EEI  A   YC   +T YPC P K Y+G
Sbjct: 128 AYK--GTV--AKREIAAMLAQFSHESGSFCYKEEI--ARGRYC-SPSTTYPCQPGKNYYG 187

Query: 181 RGPIQLSWNFNYGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGAT 240
           RGPIQ++WN+NYG AG+ +G   L +P++VA +P V+F+ A+W+W   VRPV++QGFGAT
Sbjct: 188 RGPIQITWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFQCAMWFWNKNVRPVLSQGFGAT 247

Query: 241 IRAINGALECDGANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
            R ING  EC+G   A VQ RV +Y  +C +LGV PG NL+C
Sbjct: 248 TRRINGG-ECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281

[Close]

BLAST of CmoCh13G005480.1 vs. NCBI nr
Match: gi|449454971|ref|XP_004145227.1| (PREDICTED: endochitinase PR4-like [Cucumis sativus])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 245/269 (91.08%), Postives = 260/269 (96.65%), Query Frame = 1


Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT + L+GIIAGAAAQNCGCAAGLCCSRFGFCG G DFCGTGCREGPCNIPPLT
Sbjct: 10  MQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPPLT 69

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEALQSFDRFGRIGSV+DSKR
Sbjct: 70  PSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDSKR 129

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGHLCFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 130 EIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 189

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 190 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 249

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRR+++Y QYCNQL VAPG+NLTC
Sbjct: 250 NTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

[Close]

BLAST of CmoCh13G005480.1 vs. NCBI nr
Match: gi|659068474|ref|XP_008444611.1| (PREDICTED: endochitinase PR4-like [Cucumis melo])

HSP 1 Score: 530.0 bits (1364), Expect = 2.4e-147
Identity = 246/269 (91.45%), Postives = 258/269 (95.91%), Query Frame = 1


Query: 1   MQRALLLT-VTLVGIIAGAAAQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 60
           MQ+ LLLT V L+GIIAGAAAQNCGCAAGLCCSRFGFCGTG DFCGTGCREGPCNIPPLT
Sbjct: 7   MQKTLLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGEDFCGTGCREGPCNIPPLT 66

Query: 61  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 120
           PSVNDV VA+FVTEEFFNGIINQADA CAGRGFYSRATFLEALQSFDRFGRIG+VDDSKR
Sbjct: 67  PSVNDVNVAEFVTEEFFNGIINQADASCAGRGFYSRATFLEALQSFDRFGRIGTVDDSKR 126

Query: 121 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 180
           EIAAFF HVTHETGH CFIEEIDGAT+DYCDE+NTQYPCNPSKGYFGRGPIQLSWNFNYG
Sbjct: 127 EIAAFFAHVTHETGHFCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYG 186

Query: 181 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 240
           PAGE+IGFDGLNNPEIVATNP+VSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA
Sbjct: 187 PAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 246

Query: 241 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N+ATVQRRV++Y QYCNQL V PG+NLTC
Sbjct: 247 NTATVQRRVQFYNQYCNQLNVDPGNNLTC 275

[Close]

BLAST of CmoCh13G005480.1 vs. NCBI nr
Match: gi|222139394|gb|ACM45716.1| (class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia])

HSP 1 Score: 460.3 bits (1183), Expect = 2.3e-126
Identity = 209/269 (77.70%), Postives = 241/269 (89.59%), Query Frame = 1


Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA LCCS++G+CGT + +CG GC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDDSKR
Sbjct: 64  PSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE+NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQ+RVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]

BLAST of CmoCh13G005480.1 vs. NCBI nr
Match: gi|657955457|ref|XP_008369197.1| (PREDICTED: endochitinase PR4-like [Malus domestica])

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-125
Identity = 208/269 (77.32%), Postives = 239/269 (88.85%), Query Frame = 1


Query: 3   RALLLTVTLV--GIIAGAA-AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPPLT 62
           R+++LT+ +V  G+++G A AQNCGCAA  CCS++G+CGT + +CGTGC+ GPC  P  T
Sbjct: 4   RSIILTLFIVATGVLSGYADAQNCGCAADQCCSQYGYCGTDDAYCGTGCKSGPCKTPAQT 63

Query: 63  PSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDSKR 122
           PS +DVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+ +FGRIGS+DDSKR
Sbjct: 64  PSTSDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYTQFGRIGSIDDSKR 123

Query: 123 EIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFNYG 182
           EIAAFF HVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNFNYG
Sbjct: 124 EIAAFFAHVTHETGHFCYIEEIDGASKDYCDETNTQYPCNPNKGYYGRGPIQLSWNFNYG 183

Query: 183 PAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGA 242
           PAGESIGFDGLN+PE VA +P+++FKTALWYWMN VRPVI +GFGATIRAINGALECDG 
Sbjct: 184 PAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALECDGG 243

Query: 243 NSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           N ATVQRRVEYYT+YCNQLGVAPGDNLTC
Sbjct: 244 NPATVQRRVEYYTEYCNQLGVAPGDNLTC 272

[Close]

BLAST of CmoCh13G005480.1 vs. NCBI nr
Match: gi|590654799|ref|XP_007033803.1| (Carrot EP3-3 chitinase [Theobroma cacao])

HSP 1 Score: 455.3 bits (1170), Expect = 7.4e-125
Identity = 209/271 (77.12%), Postives = 236/271 (87.08%), Query Frame = 1


Query: 1   MQRALLLTVTLVGIIAGAA---AQNCGCAAGLCCSRFGFCGTGNDFCGTGCREGPCNIPP 60
           M R  LL + L GIIAGAA   AQNCGCA GLCCSR+GFCGTG+DFCGTGC+EGPCN PP
Sbjct: 6   MIRKGLLAIVLAGIIAGAAPVKAQNCGCAEGLCCSRWGFCGTGDDFCGTGCQEGPCNPPP 65

Query: 61  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALQSFDRFGRIGSVDDS 120
              ++N+V VAD VT +FFNGI+++A+A C G+ FYSRA FLEAL S+ +FGRIGS+DDS
Sbjct: 66  ---TLNNVSVADIVTPQFFNGILDEAEASCEGKNFYSRAAFLEALNSYPQFGRIGSIDDS 125

Query: 121 KREIAAFFGHVTHETGHLCFIEEIDGATKDYCDEDNTQYPCNPSKGYFGRGPIQLSWNFN 180
           KREIAAFFGHVTHETGH CFIEEI+G T+DYCDE +TQYPCNP KGY+GRGPIQLSWNFN
Sbjct: 126 KREIAAFFGHVTHETGHFCFIEEINGTTRDYCDESSTQYPCNPDKGYYGRGPIQLSWNFN 185

Query: 181 YGPAGESIGFDGLNNPEIVATNPLVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 240
           YGPAGESIGFDGLN+PE VAT+P++SFKTALWYW+NFV+PVI QGFGATIRAINGALECD
Sbjct: 186 YGPAGESIGFDGLNSPETVATDPVISFKTALWYWVNFVQPVIGQGFGATIRAINGALECD 245

Query: 241 GANSATVQRRVEYYTQYCNQLGVAPGDNLTC 269
           G N ATVQ R+EYYT YCNQLGV PG NLTC
Sbjct: 246 GGNPATVQARIEYYTDYCNQLGVDPGANLTC 273

The following BLAST results are available for this feature:

BLAST of CmoCh13G005480.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CHI5_ARATH	5.3e-115	74.70	Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1	[more]
CHI4_PHAVU	2.2e-108	67.65	Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1	[more]
CHI6_ORYSJ	1.7e-97	60.36	Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1	[more]
CHI5_ORYSJ	2.2e-92	57.97	Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1	[more]
CHI4_ORYSJ	2.4e-91	58.21	Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2	[more]

BLAST of CmoCh13G005480.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXT8_CUCSA	7.4e-148	91.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1	[more]
B9VQ34_PYRPY	1.6e-126	77.70	Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1	[more]
A0A077GZM8_9ROSA	1.6e-126	77.70	Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1	[more]
A0A061ER07_THECC	5.2e-125	77.12	Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1	[more]
A0A059DAK6_EUCGR	2.2e-123	75.82	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1	[more]

BLAST of CmoCh13G005480.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54420.1	3.0e-116	74.70	homolog of carrot EP3-3 chitinase	[more]
AT2G43590.1	3.1e-89	57.89	Chitinase family protein	[more]
AT2G43580.1	3.3e-83	52.83	Chitinase family protein	[more]
AT2G43570.1	4.2e-70	48.01	chitinase, putative	[more]
AT2G43610.1	3.0e-68	45.39	Chitinase family protein	[more]

BLAST of CmoCh13G005480.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454971\|ref\|XP_004145227.1\|	1.1e-147	91.08	PREDICTED: endochitinase PR4-like [Cucumis sativus]	[more]
gi\|659068474\|ref\|XP_008444611.1\|	2.4e-147	91.45	PREDICTED: endochitinase PR4-like [Cucumis melo]	[more]
gi\|222139394\|gb\|ACM45716.1\|	2.3e-126	77.70	class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia]	[more]
gi\|657955457\|ref\|XP_008369197.1\|	1.1e-125	77.32	PREDICTED: endochitinase PR4-like [Malus domestica]	[more]
gi\|590654799\|ref\|XP_007033803.1\|	7.4e-125	77.12	Carrot EP3-3 chitinase [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000726	Glyco_hydro_19_cat
IPR001002	Chitin-bd_1
IPR016283	Glyco_hydro_19
IPR018371	Chitin-binding_1_CS
IPR023346	Lysozyme-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004568	chitinase activity
GO:0008061	chitin binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006032	chitin catabolic process
GO:0016998	cell wall macromolecule catabolic process
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0006032	chitin catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004568	chitinase activity
molecular_function	GO:0008061	chitin binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G005480	CmoCh13G005480	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G005480.1	CmoCh13G005480.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G005480.1.three_prime_UTR.1	CmoCh13G005480.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G005480.1.CDS.2	CmoCh13G005480.1.CDS.2	CDS
CmoCh13G005480.1.CDS.1	CmoCh13G005480.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G005480.1.exon.2	CmoCh13G005480.1.exon.2	exon
CmoCh13G005480.1.exon.1	CmoCh13G005480.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000726	Glycoside hydrolase, family 19, catalytic	PFAM	PF00182	Glyco_hydro_19	coord: 71..268 score: 1.1
IPR000726	Glycoside hydrolase, family 19, catalytic	PROSITE	PS00773	CHITINASE_19_1	coord: 87..109 scor
IPR000726	Glycoside hydrolase, family 19, catalytic	PROSITE	PS00774	CHITINASE_19_2	coord: 202..212 scor
IPR001002	Chitin-binding, type 1	PRODOM	PD000609		coord: 32..54 score: 0
IPR001002	Chitin-binding, type 1	GENE3D	G3DSA:3.30.60.10		coord: 17..60 score: 8.3
IPR001002	Chitin-binding, type 1	PFAM	PF00187	Chitin_bind_1	coord: 17..53 score: 3.
IPR001002	Chitin-binding, type 1	SMART	SM00270	ChitinBD_3	coord: 22..53 score: 3.
IPR001002	Chitin-binding, type 1	PROFILE	PS50941	CHIT_BIND_I_2	coord: 20..55 score: 9
IPR001002	Chitin-binding, type 1	unknown	SSF57016	Plant lectins/antimicrobial peptides	coord: 16..58 score: 3.93
IPR016283	Glycoside hydrolase, family 19	PIR	PIRSF001060	Endochitinase	coord: 1..268 score: 3.8E
IPR018371	Chitin-binding, type 1, conserved site	PROSITE	PS00026	CHIT_BIND_I_1	coord: 25..44 scor
IPR023346	Lysozyme-like domain	unknown	SSF53955	Lysozyme-like	coord: 67..268 score: 1.04
None	No IPR available	GENE3D	G3DSA:1.10.530.10		coord: 197..268 score: 2.4E-53coord: 69..134 score: 2.4
None	No IPR available	GENE3D	G3DSA:3.30.20.10		coord: 145..196 score: 3.5
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 3..268 score: 3.2E
None	No IPR available	PANTHER	PTHR22595:SF61	SUBFAMILY NOT NAMED	coord: 3..268 score: 3.2E