Lsi02G009130 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G009130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChitinase family protein
Locationchr02 : 8767013 .. 8769186 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAACAGAAATGGGTGGTGTTGTAGCCATGCAAAAGGCACTGCTCTTAACCGCCGTAGCTCTAATCGGAATCATCGCCGGAGCCGCAGCACAGAACTGCGGGTGCGCGGCGGGGCTGTGCTGCAGCAGATTCGGATTCTGCGGGACCGGTGATGATTTCTGTGGGAGTGGATGCACAGAAGGGCCGTGCAATATTCCCCCACTTACCCCTAGTGTGAACGACGTGGTTGTGGCGGATTTTGTGACGGAGGAATTTTTCAACGGCATAATTAACCAGGCGGACGCGGGTTGCGCCGGCCGGGGATTCTACAGTAGAGCTACTTTCTTAGAAGCTCTCCGATCGTTTGACCGATTTGGAAGAATTGGATCAGTTGACGATTCTAAAAGAGAAATCGCCGCCTTCTTTGCCCATGTTACTCACGAGACTGGACGTAAGCATTTTTTTTCTTCTTTTCCCTTTCTTCCTCTCTTGATTTTAAACTTAAATCAATCATTATTCCATTTCATTTAATTTGGATCATTATCTGAATTTTCATATTTGTGTTTATTAACTCCTTCAATTTTACAAAATATCTCTAAATTTTGGATCTAATTTTTTATTTAATTTTTAAGTTTCTAAAAGTATACATCTAGTTCTTAAGTTGTAAATTTGTAGTTCATAAGTTTTAAAATACATTGAGATTTTGAGTTTGGTTTTAATTTGGTCCCTAATTTTAAAATGTAACTTTGAATTTTCAATCAATACTTACTTTTCGTCTTTAGTATTAATGTTTATTAATTAATTTAAAAAAATTAAGAATTATAATAAATAAAATTTCACTATTTTTCGGATCCGTTTGGATTGACTAGAGAAAAAAAGTGTTTTTAAAAAAAAAAATTATTTTTATTTAAATTCTTTTGACAAAAACGACACTTTAAAAACTATTTGAAGTGGTTGTCAAACACTCCAATTTTTTTCAAAATGGCTTGTTTTTTAAATTAAACACTTAAAATACATTCCAAACACACCCTTCATTACTATTAAAATTAAATTTAAAATTTTATTTTGTATTTATTTTAAATTAATTAATAGATACTGACGTCAATGATTGATAGTGGGTATTTAATGAAAAAATAAGGTTTAAAAATCATGGTAAACTAAAAATCAAATAGTTATAAAATGAAACCATATATTATTACAACTTTCAGCCTATAAACTTTAAAATTTGTGTCTATTTAATCATTGAAATTTAAAACGTATATTCCCTAAAACTTTCAATTTTGTACGTAATAAGTTCGTAACAACTCAATTTTTTTTATAAATCAATTTATCTATTAGATATAAAATGGAACTTATGTCCAATAAAACCTTAAACTTTCCAATTGATGAATTAAAAAAAAAAAAAAAAATCTGAAACCATACGACTAAATTTGCACTTTTGAAAAGTTGAACAACCAAATAAATACAAACTCCAAAGTGTATAGACAAAATTTAAAATCTAATCAAATTAAATTTTATACTTAGATTCAAATTTTAATTTAGTGTTCACTAATTTATAGTTAAATGACAAATTTGGTCCCTTTGATTTGATAAAACTTCATAAATAGTCTTTATAGTTTGATAAAATTCTCGTAAATATGTAGTCCCTACTATAGATACTAGTTATGAAGCTTTTATCGAGATTGAATTCTAATTATAACCCATTTTTTCAAAATCATAGACACCAAATAAAAAAAGTTAAAGTTAATGACGAAAATTTAGAAATTTGATTTTGTATTGTACAACAGATTTGTGCTTCATAGAAGAAATAGATGGGGCAACAAAGGACTATTGCGACGAGGAAAACACTCAATATCCATGCAACCCAAGCAAGGGTTATTTCGGGAGAGGCCCAATCCAACTATCTTGGAACTTCAACTATGGGCCGGCAGGGGAAAACATCGGGTTCGACGGTCTAAACAACCCGGAAATCGTGGCCACCGACCCGGTGGTGTCCTTCAAGACCGCGCTCTGGTATTGGATGAACTTTGTGAGGCCGGTCATTAACCAAGGCTTCGGCGCCACCATTCGAGCCATCAATGGCGCCCTCGAATGCGACGGCGCTAACAATGCCACCGTTCAACGACGGGTCCAGTTCTATACTCAGTATTGTGATCAACTCGGCGTTGCCCCTGGGAATAATTTGACTTGTTAG

mRNA sequence

AAAAACAGAAATGGGTGGTGTTGTAGCCATGCAAAAGGCACTGCTCTTAACCGCCGTAGCTCTAATCGGAATCATCGCCGGAGCCGCAGCACAGAACTGCGGGTGCGCGGCGGGGCTGTGCTGCAGCAGATTCGGATTCTGCGGGACCGGTGATGATTTCTGTGGGAGTGGATGCACAGAAGGGCCGTGCAATATTCCCCCACTTACCCCTAGTGTGAACGACGTGGTTGTGGCGGATTTTGTGACGGAGGAATTTTTCAACGGCATAATTAACCAGGCGGACGCGGGTTGCGCCGGCCGGGGATTCTACAGTAGAGCTACTTTCTTAGAAGCTCTCCGATCGTTTGACCGATTTGGAAGAATTGGATCAGTTGACGATTCTAAAAGAGAAATCGCCGCCTTCTTTGCCCATGTTACTCACGAGACTGGACATTTGTGCTTCATAGAAGAAATAGATGGGGCAACAAAGGACTATTGCGACGAGGAAAACACTCAATATCCATGCAACCCAAGCAAGGGTTATTTCGGGAGAGGCCCAATCCAACTATCTTGGAACTTCAACTATGGGCCGGCAGGGGAAAACATCGGGTTCGACGGTCTAAACAACCCGGAAATCGTGGCCACCGACCCGGTGGTGTCCTTCAAGACCGCGCTCTGGTATTGGATGAACTTTGTGAGGCCGGTCATTAACCAAGGCTTCGGCGCCACCATTCGAGCCATCAATGGCGCCCTCGAATGCGACGGCGCTAACAATGCCACCGTTCAACGACGGGTCCAGTTCTATACTCAGTATTGTGATCAACTCGGCGTTGCCCCTGGGAATAATTTGACTTGTTAG

Coding sequence (CDS)

ATGGGTGGTGTTGTAGCCATGCAAAAGGCACTGCTCTTAACCGCCGTAGCTCTAATCGGAATCATCGCCGGAGCCGCAGCACAGAACTGCGGGTGCGCGGCGGGGCTGTGCTGCAGCAGATTCGGATTCTGCGGGACCGGTGATGATTTCTGTGGGAGTGGATGCACAGAAGGGCCGTGCAATATTCCCCCACTTACCCCTAGTGTGAACGACGTGGTTGTGGCGGATTTTGTGACGGAGGAATTTTTCAACGGCATAATTAACCAGGCGGACGCGGGTTGCGCCGGCCGGGGATTCTACAGTAGAGCTACTTTCTTAGAAGCTCTCCGATCGTTTGACCGATTTGGAAGAATTGGATCAGTTGACGATTCTAAAAGAGAAATCGCCGCCTTCTTTGCCCATGTTACTCACGAGACTGGACATTTGTGCTTCATAGAAGAAATAGATGGGGCAACAAAGGACTATTGCGACGAGGAAAACACTCAATATCCATGCAACCCAAGCAAGGGTTATTTCGGGAGAGGCCCAATCCAACTATCTTGGAACTTCAACTATGGGCCGGCAGGGGAAAACATCGGGTTCGACGGTCTAAACAACCCGGAAATCGTGGCCACCGACCCGGTGGTGTCCTTCAAGACCGCGCTCTGGTATTGGATGAACTTTGTGAGGCCGGTCATTAACCAAGGCTTCGGCGCCACCATTCGAGCCATCAATGGCGCCCTCGAATGCGACGGCGCTAACAATGCCACCGTTCAACGACGGGTCCAGTTCTATACTCAGTATTGTGATCAACTCGGCGTTGCCCCTGGGAATAATTTGACTTGTTAG

Protein sequence

MGGVVAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC
Homology
[Close]
BLAST of Lsi02G009130 vs. Swiss-Prot
Match: CHI5_ARATH (Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.2e-114
Identity = 189/249 (75.90%), Postives = 210/249 (84.34%), Query Frame = 1 

Query: 27  AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPLTPSVNDVVVADFVTEEFFNGI 86
           AQNCGC++ LCCS+FGFCG   D+CG GC +GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 87  INQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIAAFFAHVTHETGHLCFIE 146
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFFAHVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 147 EIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYGPAGENIGFDGLNNPEIVATD 206
           EIDGA+KDYCDE  TQYPCNP+KGY+GRGPIQLSWNFNYGPAG  IGFDGLN PE VATD
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 207 PVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANNATVQRRVQFYTQYCDQLG 266
           PV+SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN ATVQ RV++YT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 267 VAPGNNLTC 276
           V PGNNLTC
Sbjct: 268 VDPGNNLTC 273

[Close]
BLAST of Lsi02G009130 vs. Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.5e-108
Identity = 186/266 (69.92%), Postives = 212/266 (79.70%), Query Frame = 1 

Query: 11  LLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPLTPSVN 70
           L+L AVAL+      +AQNCGCA GLCCS++G+CGTG+D+CG+GC +GPC      PS N
Sbjct: 7   LVLVAVALVMGPKNVSAQNCGCAEGLCCSQYGYCGTGEDYCGTGCQQGPCTTASPPPSNN 66

Query: 71  DVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIAA 130
             V AD +T +F NGII+QAD+GCAG+ FY+R  FL AL S+  FGR+GS DDSKREIAA
Sbjct: 67  --VNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAA 126

Query: 131 FFAHVTHETGHLCFIEEIDGATKDYCDEEN-TQYPCNPSKGYFGRGPIQLSWNFNYGPAG 190
            FAH THETGH C+IEEIDGA+KDYCDEE+  QYPC+ SKGY GRGPIQLSWNFNYGPAG
Sbjct: 127 AFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAG 186

Query: 191 ENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANNA 250
               FDGL  PE V+ D VVSFKTALWYWM  VRPVINQGFGATIRAINGALECDGAN  
Sbjct: 187 SANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPT 246

Query: 251 TVQRRVQFYTQYCDQLGVAPGNNLTC 276
           TVQ RV +YT+YC QLGVA G+NLTC
Sbjct: 247 TVQARVNYYTEYCRQLGVATGDNLTC 270

[Close]
BLAST of Lsi02G009130 vs. Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.3e-96
Identity = 164/275 (59.64%), Postives = 204/275 (74.18%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAG--AAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNI 64
           +A + +LL   +A++  ++   AAAQ+CGCA+  CCS++GFCGTG D+CG+GC  GPC++
Sbjct: 1   MARRLSLLAVVLAMVAAVSASTAAAQSCGCASDQCCSKWGFCGTGSDYCGTGCQAGPCDV 60

Query: 65  PPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVD 124
           P    + NDV VA  VT EFF  ++ QAD GCA +GFY+R  FL A   +  FGR GSVD
Sbjct: 61  P----ATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVD 120

Query: 125 DSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWN 184
           DSKREIAAFFAH  HET   C+IEEIDG +K+YCDE +TQ+PC   KGY+GRGP+Q+SWN
Sbjct: 121 DSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWN 180

Query: 185 FNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRP--VINQGFGATIRAINGA 244
           FNYGPAG++IGFDGL +P+ VA  PV++F+TALWYW N V    V  QGFGATIRAINGA
Sbjct: 181 FNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGA 240

Query: 245 LECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           LECDG N   V  RV +Y Q+C Q GV PG+NLTC
Sbjct: 241 LECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271

[Close]
BLAST of Lsi02G009130 vs. Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 342.0 bits (876), Expect = 5.9e-93
Identity = 163/285 (57.19%), Postives = 195/285 (68.42%), Query Frame = 1 

Query: 1   MGGVVAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPC 60
           M   +A   AL+     L+   A AAAQNCGC  G CCS++G+CGT + +CG GC  GPC
Sbjct: 1   MAAKMATMVALVFGLALLLSAAAPAAAQNCGCQDGYCCSQWGYCGTTEAYCGQGCQSGPC 60

Query: 61  ----------NIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALR 120
                            +   V V   VTE FFNGI NQA  GCAG+ FY+R +FL A R
Sbjct: 61  WGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAAR 120

Query: 121 SFDRFGRIGSVDDSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKG 180
           S+  F    + DDSKREIAAFFAHVTHETGH+C+I EI+GA  DYCD+ N Q+PC P K 
Sbjct: 121 SYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKK 180

Query: 181 YFGRGPIQLSWNFNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGF 240
           Y+GRGP+Q+SWNFNYGPAG+NIGFDGL +P+ VA DP +SFKTALW+WMN V  V++QGF
Sbjct: 181 YYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGF 240

Query: 241 GATIRAINGALECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           GATIRAINGALEC+G N   V  RV +Y  YC Q GV+PG NL C
Sbjct: 241 GATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285

[Close]
BLAST of Lsi02G009130 vs. Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.0e-92
Identity = 162/282 (57.45%), Postives = 196/282 (69.50%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPC---- 64
           +A+  ALLL+A         A+AQNCGC + +CCS++G+CGTG D+CG GC  GPC    
Sbjct: 13  LALGLALLLSATGQ------ASAQNCGCQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGG 72

Query: 65  -------NIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFD 124
                           + V V   VTE FFNGI NQA  GCAG+ FY+R +FL A  S+ 
Sbjct: 73  GGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYS 132

Query: 125 RFGRIGSVDDSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFG 184
            F R  + DDSKREIAAFFAHVTHETGH+C+I EI+GA+ DYCD+ N Q+PC P K Y+G
Sbjct: 133 GFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYG 192

Query: 185 RGPIQLSWNFNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGAT 244
           RGP+Q+SWN+NYGPAG+NIGFDGL +P+ VA DP +SFKTALW+WMN V  V+ QGFGAT
Sbjct: 193 RGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGAT 252

Query: 245 IRAINGALECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           IRAINGALEC+G N   V  RV +Y  YC Q GV PG NL C
Sbjct: 253 IRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288

[Close]
BLAST of Lsi02G009130 vs. TrEMBL
Match: A0A0A0LXT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 7.3e-151
Identity = 253/271 (93.36%), Postives = 264/271 (97.42%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPP 64
           VAMQK LLLTA+ALIGIIAGAAAQNCGCAAGLCCSRFGFCG G+DFCG+GC EGPCNIPP
Sbjct: 8   VAMQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPP 67

Query: 65  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDS 124
           LTPSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEAL+SFDRFGRIGSV+DS
Sbjct: 68  LTPSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDS 127

Query: 125 KREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFN 184
           KREIAAFFAHVTHETGHLCFIEEIDGAT+DYCDEENTQYPCNPSKGYFGRGPIQLSWNFN
Sbjct: 128 KREIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFN 187

Query: 185 YGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 244
           YGPAGENIGFDGLNNPEIVAT+PVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD
Sbjct: 188 YGPAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 247

Query: 245 GANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           GAN ATVQRR+QFY QYC+QL VAPGNNLTC
Sbjct: 248 GANTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

[Close]
BLAST of Lsi02G009130 vs. TrEMBL
Match: B9VQ34_PYRPY (Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.6e-124
Identity = 206/272 (75.74%), Postives = 237/272 (87.13%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A +  +L   +   G+++G A AQNCGCAA LCCS++G+CGT D +CG GC  GPC  P
Sbjct: 1   MAARSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTP 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
             TPS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDD
Sbjct: 61  AQTPSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDD 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
           SKREIAAFFAHVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNF
Sbjct: 121 SKREIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNF 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYGPAGE+IGFDGLN+PE VA DPV++FKTALWYWMN VRPVI +GFGATIRAINGALEC
Sbjct: 181 NYGPAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALEC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQ+RV++YT+YC+QLGVAPG+NLTC
Sbjct: 241 DGGNPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of Lsi02G009130 vs. TrEMBL
Match: A0A077GZM8_9ROSA (Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.6e-124
Identity = 206/272 (75.74%), Postives = 237/272 (87.13%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A +  +L   +   G+++G A AQNCGCAA LCCS++G+CGT D +CG GC  GPC  P
Sbjct: 1   MAARSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTP 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
             TPS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDD
Sbjct: 61  AQTPSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDD 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
           SKREIAAFFAHVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNF
Sbjct: 121 SKREIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNF 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYGPAGE+IGFDGLN+PE VA DPV++FKTALWYWMN VRPVI +GFGATIRAINGALEC
Sbjct: 181 NYGPAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALEC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQ+RV++YT+YC+QLGVAPG+NLTC
Sbjct: 241 DGGNPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of Lsi02G009130 vs. TrEMBL
Match: A0A059DAK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.3e-123
Identity = 210/272 (77.21%), Postives = 236/272 (86.76%), Query Frame = 1 

Query: 9   KALLLTAVALIGIIAGA-----AAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 68
           + LLLTAVA+ GII  A     +AQNCGCAA  CCSR+G+CGTGDD+CG+GC EGPCN P
Sbjct: 7   RKLLLTAVAVAGIIISALPDTTSAQNCGCAADQCCSRWGYCGTGDDYCGTGCQEGPCNAP 66

Query: 69  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 128
           P T   NDVVVAD VTE FF+GII QA   C G+GFYSR TFLEA  S+ +FGR+GSVDD
Sbjct: 67  PPT---NDVVVADVVTEAFFDGIIGQAAESCEGKGFYSRGTFLEAAGSYPQFGRVGSVDD 126

Query: 129 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 188
           SKREIAAFFAHVTHETGH C+I EIDGA+KDYCDE NTQYPC+P+KGY+GRGPIQLSWNF
Sbjct: 127 SKREIAAFFAHVTHETGHFCYINEIDGASKDYCDETNTQYPCSPNKGYYGRGPIQLSWNF 186

Query: 189 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 248
           NYGPAGE+IGFDGLN+P+ VATDP++SFKTALWYWMNFVRPVI+QGFGATIRAINGALEC
Sbjct: 187 NYGPAGESIGFDGLNSPDTVATDPLISFKTALWYWMNFVRPVIDQGFGATIRAINGALEC 246

Query: 249 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQ RVQ+YT+YC QLGVAPG+NLTC
Sbjct: 247 DGGNPATVQARVQYYTEYCSQLGVAPGDNLTC 275

[Close]
BLAST of Lsi02G009130 vs. TrEMBL
Match: A0A061ER07_THECC (Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.2e-122
Identity = 204/266 (76.69%), Postives = 232/266 (87.22%), Query Frame = 1 

Query: 13  LTAVALIGIIAGAA---AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPLTPSV 72
           L A+ L GIIAGAA   AQNCGCA GLCCSR+GFCGTGDDFCG+GC EGPCN PP   ++
Sbjct: 11  LLAIVLAGIIAGAAPVKAQNCGCAEGLCCSRWGFCGTGDDFCGTGCQEGPCNPPP---TL 70

Query: 73  NDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIA 132
           N+V VAD VT +FFNGI+++A+A C G+ FYSRA FLEAL S+ +FGRIGS+DDSKREIA
Sbjct: 71  NNVSVADIVTPQFFNGILDEAEASCEGKNFYSRAAFLEALNSYPQFGRIGSIDDSKREIA 130

Query: 133 AFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYGPAG 192
           AFF HVTHETGH CFIEEI+G T+DYCDE +TQYPCNP KGY+GRGPIQLSWNFNYGPAG
Sbjct: 131 AFFGHVTHETGHFCFIEEINGTTRDYCDESSTQYPCNPDKGYYGRGPIQLSWNFNYGPAG 190

Query: 193 ENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANNA 252
           E+IGFDGLN+PE VATDPV+SFKTALWYW+NFV+PVI QGFGATIRAINGALECDG N A
Sbjct: 191 ESIGFDGLNSPETVATDPVISFKTALWYWVNFVQPVIGQGFGATIRAINGALECDGGNPA 250

Query: 253 TVQRRVQFYTQYCDQLGVAPGNNLTC 276
           TVQ R+++YT YC+QLGV PG NLTC
Sbjct: 251 TVQARIEYYTDYCNQLGVDPGANLTC 273

[Close]
BLAST of Lsi02G009130 vs. TAIR10
Match: AT3G54420.1 (AT3G54420.1 homolog of carrot EP3-3 chitinase)

HSP 1 Score: 414.1 bits (1063), Expect = 6.9e-116
Identity = 189/249 (75.90%), Postives = 210/249 (84.34%), Query Frame = 1 

Query: 27  AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPLTPSVNDVVVADFVTEEFFNGI 86
           AQNCGC++ LCCS+FGFCG   D+CG GC +GPC  PP     N V VA+ VT+EFFNGI
Sbjct: 28  AQNCGCSSELCCSQFGFCGNTSDYCGVGCQQGPCFAPP---PANGVSVAEIVTQEFFNGI 87

Query: 87  INQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIAAFFAHVTHETGHLCFIE 146
           I+QA + CAG  FYSR  FLEAL S+ RFGR+GS DDS+REIAAFFAHVTHETGH C+IE
Sbjct: 88  ISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIE 147

Query: 147 EIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYGPAGENIGFDGLNNPEIVATD 206
           EIDGA+KDYCDE  TQYPCNP+KGY+GRGPIQLSWNFNYGPAG  IGFDGLN PE VATD
Sbjct: 148 EIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATD 207

Query: 207 PVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANNATVQRRVQFYTQYCDQLG 266
           PV+SFKTALWYW N V+PVI+QGFGATIRAINGALECDGAN ATVQ RV++YT YC QLG
Sbjct: 208 PVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLG 267

Query: 267 VAPGNNLTC 276
           V PGNNLTC
Sbjct: 268 VDPGNNLTC 273

[Close]
BLAST of Lsi02G009130 vs. TAIR10
Match: AT2G43590.1 (AT2G43590.1 Chitinase family protein)

HSP 1 Score: 317.4 bits (812), Expect = 8.7e-87
Identity = 152/272 (55.88%), Postives = 191/272 (70.22%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A  K  L+  + L+G  +    +QNCGCA  LCCS+FG+CGT D +CG GC  GPC   
Sbjct: 1   MAFTKISLVLLLCLLGFFSETVKSQNCGCAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGS 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
             TP+   V     VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    SV  
Sbjct: 61  G-TPTGGSV--GSIVTQGFFNNIINQAGNGCAGKRFYTRDSFVNAANTFPNFAN--SV-- 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
           ++REIA  FAH THETGH C+IEEI+GAT++YC   NTQYPC P KGYFGRGPIQLSWN+
Sbjct: 121 TRREIATMFAHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNY 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYG  G+++G D L  PE+V ++P V+F+T LW+WMN VRPV+NQGFGATIRAING +EC
Sbjct: 181 NYGACGQSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MEC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           +G N+  V  R+ +Y  YC QLGV PG NL+C
Sbjct: 241 NGGNSGAVNARIGYYRDYCGQLGVDPGPNLSC 264

[Close]
BLAST of Lsi02G009130 vs. TAIR10
Match: AT2G43580.1 (AT2G43580.1 Chitinase family protein)

HSP 1 Score: 302.0 bits (772), Expect = 3.8e-82
Identity = 141/272 (51.84%), Postives = 189/272 (69.49%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A+ K  L+  ++L+G+ +    +QNC CA  LCCS+FG+CGT  D+CGS C  GPC + 
Sbjct: 1   MALTKIFLILLLSLLGLYSETVKSQNCDCAPNLCCSQFGYCGTTADYCGSTCQSGPCRVG 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
              P     +V + VT+ FFN IINQA  GCAG+ FY+R +F+ A  +F  F    +   
Sbjct: 61  G--PPTGAGLVGNIVTQIFFNNIINQAGNGCAGKSFYTRDSFINATNTFPSFANTVT--- 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
            +REIA  FAH T+ETGH C+IEEI+GA++  CD+ N QYPC P+K Y GRGP+ LSWNF
Sbjct: 121 -RREIATMFAHFTYETGHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNF 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYG  G+++G D L  PE+V+++PVV+F+TALW+WM  VRPV+NQGFGATIRAI+G  +C
Sbjct: 181 NYGACGQSLGLDLLRQPELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N   V  R+ +Y  YC QLG+ PG N+TC
Sbjct: 241 DGRNLGGVNARIGYYRDYCGQLGLDPGANITC 265

[Close]
BLAST of Lsi02G009130 vs. TAIR10
Match: AT2G43570.1 (AT2G43570.1 chitinase, putative)

HSP 1 Score: 261.9 bits (668), Expect = 4.4e-70
Identity = 130/257 (50.58%), Postives = 169/257 (65.76%), Query Frame = 1 

Query: 26  AAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPPL--TPSVNDVVVADFVTEEFF 85
           A+QNCGCA+  CCS++G+CGT D+FCG GC  GPC        P+V+   +   VT +FF
Sbjct: 30  ASQNCGCASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGGGGDPAVS---LEGTVTPDFF 89

Query: 86  NGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDSKREIAAFFAHVTHETGHLC 145
           N I+NQ    C G+GFY+  TF+ A  S+  FG       SKREIAAFFAHV  ETG +C
Sbjct: 90  NSILNQR-GDCPGKGFYTHDTFMAAANSYPSFG----ASISKREIAAFFAHVAQETGFMC 149

Query: 146 FIEEIDGATK----DYCDEENTQYPCNPSKGYFGRGPIQLSWNFNYGPAGENIGFDGLNN 205
           +IEEIDG  K    +YCD E  ++PC   KGY+GRG IQLSWN+NYG  G+ +  + L +
Sbjct: 150 YIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGLCGKALDENLLAS 209

Query: 206 PEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECDGANN-ATVQRRVQFY 265
           PE VA D V++FKTA W+W   VR     GFGATIRA+N + EC G ++ A    R++++
Sbjct: 210 PEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVN-SRECSGGDSTAKAANRIKYF 269

Query: 266 TQYCDQLGVAPGNNLTC 276
             YC +LGVAPG+NLTC
Sbjct: 270 QDYCGKLGVAPGDNLTC 277

[Close]
BLAST of Lsi02G009130 vs. TAIR10
Match: AT2G43610.1 (AT2G43610.1 Chitinase family protein)

HSP 1 Score: 249.2 bits (635), Expect = 2.9e-66
Identity = 128/282 (45.39%), Postives = 175/282 (62.06%), Query Frame = 1 

Query: 7   MQKALLLTAVALIGIIAGAAAQNCG---CAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 66
           ++KAL++    L  +   A +QNCG   C   +CCSR+G+CGT   +CG+GC  GPCN  
Sbjct: 8   LKKALIIFLFTLTIMTGTAFSQNCGTNGCKGNMCCSRWGYCGTTKAYCGTGCQSGPCNSK 67

Query: 67  PL---TPSVNDVV-------VADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFD 126
           P    TPS +  +       +A  +T  FFN I+++  +GC  +GFY+R  F+ A  SF 
Sbjct: 68  PKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFA 127

Query: 127 RFGRIGSVDDSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFG 186
            +   G+V  +KREIAA  A  +HE+G  C+ EEI  A   YC    T YPC P K Y+G
Sbjct: 128 AYK--GTV--AKREIAAMLAQFSHESGSFCYKEEI--ARGRYCSPSTT-YPCQPGKNYYG 187

Query: 187 RGPIQLSWNFNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGAT 246
           RGPIQ++WN+NYG AG+ +G   L +P++VA  P V+F+ A+W+W   VRPV++QGFGAT
Sbjct: 188 RGPIQITWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFQCAMWFWNKNVRPVLSQGFGAT 247

Query: 247 IRAINGALECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
            R ING  EC+G   A VQ RV  Y  +C +LGV PG NL+C
Sbjct: 248 TRRINGG-ECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281

[Close]
BLAST of Lsi02G009130 vs. NCBI nr
Match: gi|659068474|ref|XP_008444611.1| (PREDICTED: endochitinase PR4-like [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 6.2e-151
Identity = 256/275 (93.09%), Postives = 264/275 (96.00%), Query Frame = 1 

Query: 1   MGGVVAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPC 60
           M G VAMQK LLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTG+DFCG+GC EGPC
Sbjct: 1   MEGGVAMQKTLLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGEDFCGTGCREGPC 60

Query: 61  NIPPLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGS 120
           NIPPLTPSVNDV VA+FVTEEFFNGIINQADA CAGRGFYSRATFLEAL+SFDRFGRIG+
Sbjct: 61  NIPPLTPSVNDVNVAEFVTEEFFNGIINQADASCAGRGFYSRATFLEALQSFDRFGRIGT 120

Query: 121 VDDSKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLS 180
           VDDSKREIAAFFAHVTHETGH CFIEEIDGAT+DYCDEENTQYPCNPSKGYFGRGPIQLS
Sbjct: 121 VDDSKREIAAFFAHVTHETGHFCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLS 180

Query: 181 WNFNYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGA 240
           WNFNYGPAGENIGFDGLNNPEIVAT+PVVSFKTALWYWMNFVRPVINQGFGATIRAINGA
Sbjct: 181 WNFNYGPAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGA 240

Query: 241 LECDGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           LECDGAN ATVQRRVQFY QYC+QL V PGNNLTC
Sbjct: 241 LECDGANTATVQRRVQFYNQYCNQLNVDPGNNLTC 275

[Close]
BLAST of Lsi02G009130 vs. NCBI nr
Match: gi|449454971|ref|XP_004145227.1| (PREDICTED: endochitinase PR4-like [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 1.1e-150
Identity = 253/271 (93.36%), Postives = 264/271 (97.42%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAAAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIPP 64
           VAMQK LLLTA+ALIGIIAGAAAQNCGCAAGLCCSRFGFCG G+DFCG+GC EGPCNIPP
Sbjct: 8   VAMQKTLLLTALALIGIIAGAAAQNCGCAAGLCCSRFGFCGNGEDFCGTGCREGPCNIPP 67

Query: 65  LTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDDS 124
           LTPSVNDV VA+FVTEEFFNGIIN+ADAGCAGRGFYSRATFLEAL+SFDRFGRIGSV+DS
Sbjct: 68  LTPSVNDVNVAEFVTEEFFNGIINEADAGCAGRGFYSRATFLEALQSFDRFGRIGSVEDS 127

Query: 125 KREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNFN 184
           KREIAAFFAHVTHETGHLCFIEEIDGAT+DYCDEENTQYPCNPSKGYFGRGPIQLSWNFN
Sbjct: 128 KREIAAFFAHVTHETGHLCFIEEIDGATRDYCDEENTQYPCNPSKGYFGRGPIQLSWNFN 187

Query: 185 YGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 244
           YGPAGENIGFDGLNNPEIVAT+PVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD
Sbjct: 188 YGPAGENIGFDGLNNPEIVATNPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALECD 247

Query: 245 GANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           GAN ATVQRR+QFY QYC+QL VAPGNNLTC
Sbjct: 248 GANTATVQRRIQFYNQYCNQLNVAPGNNLTC 278

[Close]
BLAST of Lsi02G009130 vs. NCBI nr
Match: gi|222139394|gb|ACM45716.1| (class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia])

HSP 1 Score: 453.0 bits (1164), Expect = 3.8e-124
Identity = 206/272 (75.74%), Postives = 237/272 (87.13%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A +  +L   +   G+++G A AQNCGCAA LCCS++G+CGT D +CG GC  GPC  P
Sbjct: 1   MAARSIILTLFIVATGVLSGYADAQNCGCAADLCCSQYGYCGTDDAYCGKGCQSGPCKTP 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
             TPS NDVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+++FGRIGSVDD
Sbjct: 61  AQTPSTNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDD 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
           SKREIAAFFAHVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNF
Sbjct: 121 SKREIAAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGPIQLSWNF 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYGPAGE+IGFDGLN+PE VA DPV++FKTALWYWMN VRPVI +GFGATIRAINGALEC
Sbjct: 181 NYGPAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALEC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQ+RV++YT+YC+QLGVAPG+NLTC
Sbjct: 241 DGGNPATVQKRVEYYTEYCNQLGVAPGDNLTC 272

[Close]
BLAST of Lsi02G009130 vs. NCBI nr
Match: gi|702236384|ref|XP_010055735.1| (PREDICTED: endochitinase PR4-like [Eucalyptus grandis])

HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-123
Identity = 210/272 (77.21%), Postives = 236/272 (86.76%), Query Frame = 1 

Query: 9   KALLLTAVALIGIIAGA-----AAQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 68
           + LLLTAVA+ GII  A     +AQNCGCAA  CCSR+G+CGTGDD+CG+GC EGPCN P
Sbjct: 7   RKLLLTAVAVAGIIISALPDTTSAQNCGCAADQCCSRWGYCGTGDDYCGTGCQEGPCNAP 66

Query: 69  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 128
           P T   NDVVVAD VTE FF+GII QA   C G+GFYSR TFLEA  S+ +FGR+GSVDD
Sbjct: 67  PPT---NDVVVADVVTEAFFDGIIGQAAESCEGKGFYSRGTFLEAAGSYPQFGRVGSVDD 126

Query: 129 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 188
           SKREIAAFFAHVTHETGH C+I EIDGA+KDYCDE NTQYPC+P+KGY+GRGPIQLSWNF
Sbjct: 127 SKREIAAFFAHVTHETGHFCYINEIDGASKDYCDETNTQYPCSPNKGYYGRGPIQLSWNF 186

Query: 189 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 248
           NYGPAGE+IGFDGLN+P+ VATDP++SFKTALWYWMNFVRPVI+QGFGATIRAINGALEC
Sbjct: 187 NYGPAGESIGFDGLNSPDTVATDPLISFKTALWYWMNFVRPVIDQGFGATIRAINGALEC 246

Query: 249 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQ RVQ+YT+YC QLGVAPG+NLTC
Sbjct: 247 DGGNPATVQARVQYYTEYCSQLGVAPGDNLTC 275

[Close]
BLAST of Lsi02G009130 vs. NCBI nr
Match: gi|657955457|ref|XP_008369197.1| (PREDICTED: endochitinase PR4-like [Malus domestica])

HSP 1 Score: 448.7 bits (1153), Expect = 7.1e-123
Identity = 204/272 (75.00%), Postives = 236/272 (86.76%), Query Frame = 1 

Query: 5   VAMQKALLLTAVALIGIIAGAA-AQNCGCAAGLCCSRFGFCGTGDDFCGSGCTEGPCNIP 64
           +A +  +L   +   G+++G A AQNCGCAA  CCS++G+CGT D +CG+GC  GPC  P
Sbjct: 1   MAARSIILTLFIVATGVLSGYADAQNCGCAADQCCSQYGYCGTDDAYCGTGCKSGPCKTP 60

Query: 65  PLTPSVNDVVVADFVTEEFFNGIINQADAGCAGRGFYSRATFLEALRSFDRFGRIGSVDD 124
             TPS +DVVVAD VT EFFNGII+QADA CAG+ FYSRATFLEAL S+ +FGRIGS+DD
Sbjct: 61  AQTPSTSDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYTQFGRIGSIDD 120

Query: 125 SKREIAAFFAHVTHETGHLCFIEEIDGATKDYCDEENTQYPCNPSKGYFGRGPIQLSWNF 184
           SKREIAAFFAHVTHETGH C+IEEIDGA+KDYCDE NTQYPCNP+KGY+GRGPIQLSWNF
Sbjct: 121 SKREIAAFFAHVTHETGHFCYIEEIDGASKDYCDETNTQYPCNPNKGYYGRGPIQLSWNF 180

Query: 185 NYGPAGENIGFDGLNNPEIVATDPVVSFKTALWYWMNFVRPVINQGFGATIRAINGALEC 244
           NYGPAGE+IGFDGLN+PE VA DPV++FKTALWYWMN VRPVI +GFGATIRAINGALEC
Sbjct: 181 NYGPAGESIGFDGLNSPETVANDPVIAFKTALWYWMNNVRPVIGEGFGATIRAINGALEC 240

Query: 245 DGANNATVQRRVQFYTQYCDQLGVAPGNNLTC 276
           DG N ATVQRRV++YT+YC+QLGVAPG+NLTC
Sbjct: 241 DGGNPATVQRRVEYYTEYCNQLGVAPGDNLTC 272

The following BLAST results are available for this feature:
BLAST of Lsi02G009130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHI5_ARATH1.2e-11475.90Endochitinase EP3 OS=Arabidopsis thaliana GN=EP3 PE=1 SV=1[more]
CHI4_PHAVU6.5e-10869.92Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1[more]
CHI6_ORYSJ4.3e-9659.64Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1[more]
CHI4_ORYSJ5.9e-9357.19Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2[more]
CHI5_ORYSJ5.0e-9257.45Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1[more]
BLAST of Lsi02G009130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXT8_CUCSA7.3e-15193.36Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534750 PE=3 SV=1[more]
B9VQ34_PYRPY2.6e-12475.74Class IV chitinase OS=Pyrus pyrifolia PE=2 SV=1[more]
A0A077GZM8_9ROSA2.6e-12475.74Chitinase ppl-2 OS=Pyrus x bretschneideri PE=2 SV=1[more]
A0A059DAK6_EUCGR1.3e-12377.21Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00020 PE=3 SV=1[more]
A0A061ER07_THECC3.2e-12276.69Carrot EP3-3 chitinase OS=Theobroma cacao GN=TCM_019914 PE=3 SV=1[more]
BLAST of Lsi02G009130 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54420.16.9e-11675.90 homolog of carrot EP3-3 chitinase[more]
AT2G43590.18.7e-8755.88 Chitinase family protein[more]
AT2G43580.13.8e-8251.84 Chitinase family protein[more]
AT2G43570.14.4e-7050.58 chitinase, putative[more]
AT2G43610.12.9e-6645.39 Chitinase family protein[more]
BLAST of Lsi02G009130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068474|ref|XP_008444611.1|6.2e-15193.09PREDICTED: endochitinase PR4-like [Cucumis melo][more]
gi|449454971|ref|XP_004145227.1|1.1e-15093.36PREDICTED: endochitinase PR4-like [Cucumis sativus][more]
gi|222139394|gb|ACM45716.1|3.8e-12475.74class IV chitinase [Pyrus x bretschneideri x Pyrus pyrifolia][more]
gi|702236384|ref|XP_010055735.1|1.9e-12377.21PREDICTED: endochitinase PR4-like [Eucalyptus grandis][more]
gi|657955457|ref|XP_008369197.1|7.1e-12375.00PREDICTED: endochitinase PR4-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0016998cell wall macromolecule catabolic process
GO:0006032chitin catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0004568chitinase activity
Vocabulary: INTERPRO
TermDefinition
IPR023346Lysozyme-like_dom_sf
IPR018371Chitin-binding_1_CS
IPR016283Glyco_hydro_19
IPR001002Chitin-bd_1
IPR000726Glyco_hydro_19_cat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0006032 chitin catabolic process
biological_process GO:0009617 response to bacterium
biological_process GO:0009611 response to wounding
biological_process GO:0010262 somatic embryogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005618 cell wall
molecular_function GO:0004568 chitinase activity
molecular_function GO:0008061 chitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G009130.1Lsi02G009130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000726Glycoside hydrolase, family 19, catalyticPFAMPF00182Glyco_hydro_19coord: 78..275
score: 1.6
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00773CHITINASE_19_1coord: 94..116
scor
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00774CHITINASE_19_2coord: 209..219
scor
IPR001002Chitin-binding, type 1GENE3DG3DSA:3.30.60.10coord: 24..67
score: 1.5
IPR001002Chitin-binding, type 1PFAMPF00187Chitin_bind_1coord: 24..60
score: 5.
IPR001002Chitin-binding, type 1SMARTSM00270ChitinBD_3coord: 29..60
score: 2.
IPR001002Chitin-binding, type 1PROFILEPS50941CHIT_BIND_I_2coord: 27..62
score: 9
IPR001002Chitin-binding, type 1unknownSSF57016Plant lectins/antimicrobial peptidescoord: 23..65
score: 7.07
IPR016283Glycoside hydrolase, family 19PIRPIRSF001060Endochitinasecoord: 3..275
score: 8.7E
IPR018371Chitin-binding, type 1, conserved sitePROSITEPS00026CHIT_BIND_I_1coord: 32..51
scor
IPR023346Lysozyme-like domainunknownSSF53955Lysozyme-likecoord: 74..275
score: 3.37
NoneNo IPR availableGENE3DG3DSA:1.10.530.10coord: 204..275
score: 3.9E-54coord: 76..141
score: 3.9
NoneNo IPR availableGENE3DG3DSA:3.30.20.10coord: 152..203
score: 6.3
NoneNo IPR availablePANTHERPTHR22595CHITINASE-RELATEDcoord: 4..275
score: 9.2E
NoneNo IPR availablePANTHERPTHR22595:SF61SUBFAMILY NOT NAMEDcoord: 4..275
score: 9.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G009130Csa1G534750Cucumber (Chinese Long) v2culsiB023
Lsi02G009130CSPI01G24500Wild cucumber (PI 183967)cpilsiB022
Lsi02G009130Cucsa.152090Cucumber (Gy14) v1cgylsiB243
Lsi02G009130CmaCh13G005180Cucurbita maxima (Rimu)cmalsiB207
Lsi02G009130CmoCh13G005480Cucurbita moschata (Rifu)cmolsiB197
Lsi02G009130Cla019559Watermelon (97103) v1lsiwmB188
Lsi02G009130MELO3C002759Melon (DHL92) v3.5.1lsimeB179
Lsi02G009130ClCG03G006570Watermelon (Charleston Gray)lsiwcgB188
Lsi02G009130MELO3C002759.2Melon (DHL92) v3.6.1lsimedB189
Lsi02G009130Cla97C03G057860Watermelon (97103) v2lsiwmbB181
Lsi02G009130Bhi08G001662Wax gourdlsiwgoB254
Lsi02G009130Cp4.1LG20g05350Cucurbita pepo (Zucchini)cpelsiB417
Lsi02G009130CsGy1G023960Cucumber (Gy14) v2cgyblsiB019
Lsi02G009130Carg25448Silver-seed gourdcarlsiB184
Lsi02G009130CsaV3_1G036780Cucumber (Chinese Long) v3cuclsiB023
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G009130Silver-seed gourdcarlsiB274
Lsi02G009130Silver-seed gourdcarlsiB384
Lsi02G009130Silver-seed gourdcarlsiB670
Lsi02G009130Cucumber (Chinese Long) v3cuclsiB465
Lsi02G009130Watermelon (97103) v2lsiwmbB154
Lsi02G009130Wax gourdlsiwgoB231
Lsi02G009130Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi02G009130Cucumber (Gy14) v1cgylsiB023
Lsi02G009130Cucurbita maxima (Rimu)cmalsiB369
Lsi02G009130Cucurbita maxima (Rimu)cmalsiB606
Lsi02G009130Cucurbita maxima (Rimu)cmalsiB796
Lsi02G009130Cucurbita moschata (Rifu)cmolsiB356
Lsi02G009130Cucurbita moschata (Rifu)cmolsiB593
Lsi02G009130Cucurbita moschata (Rifu)cmolsiB783
Lsi02G009130Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G009130Cucurbita pepo (Zucchini)cpelsiB058
Lsi02G009130Cucurbita pepo (Zucchini)cpelsiB402
Lsi02G009130Wild cucumber (PI 183967)cpilsiB444
Lsi02G009130Cucumber (Chinese Long) v2culsiB438
Lsi02G009130Melon (DHL92) v3.5.1lsimeB228
Lsi02G009130Watermelon (Charleston Gray)lsiwcgB170
Lsi02G009130Watermelon (97103) v1lsiwmB200
Lsi02G009130Cucumber (Gy14) v2cgyblsiB031
Lsi02G009130Cucumber (Gy14) v2cgyblsiB401
Lsi02G009130Melon (DHL92) v3.6.1lsimedB239