CmoCh13G001540 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G001540
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionIron-sulfur cluster insertion protein ErpA
LocationCmo_Chr13 : 953797 .. 959767 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATAAAGAAATAAAATCAAAGCCCAATCCCATTGCTCAATCGTCCTCTCCGTTAGCTTCCGCAAGGTTCCATCGCAGCGTTCACGCGCCGCCCCTTCTCCTCCTTCTCGCTCGGTGCCGCTTCTCCTTCCTCTCTCATGCCGCGTCGCAGCTCTGTTTCTCGTCTCTGATTTTTGTCGGCTGCCATCCTTTCGTATCAGGTATTAAATTGTGTATACTATAGTTTTAGAAGACCTGATTGTGAATTCATATGATATTTCTTTTGTTACTCTGTTGAGTTAATTGGTTATTTTTACTTCAAACTTCACTTAGGAATGATAGTTTTGAGATAAAAATTGTTTAATTTCGATATGCGTAGGAAGAAAACTGTTCATAAGCATGATTTTTGGAAGAAGTTAACTCAATAATTAAAATCGAGGGTTATTGATAAGAACTTAGGAAGGAAGAACTATGTGATTTTCGGCATGTAGTGTTTGTTATCAATGTTGTTTCGACCATCATAGCTATGTTGCAATTATTATGTTTTGGAAATACAATTATTGAGCTTTCACTCTGCTTGAACTGGTCTAAGTTACCCAATTGTTTCCTCCTAGGAAGATGGTCCACCATTTTGGAGTATACTTCCTTGTACGACCGAACCGTCCTCCTATGACTTTTCAAATGCCTCTAGATATAGTTTGTTATAATATAACATGACTTCCATTGAGCCATATTGTGGTCCTCATAAAGCTTGATCTGTAGTTATCCTAGTAAGTGCTAGTGATAAGCTTGGATGGGCAAGATTTAGTCTCAACGATGTATACTTTCAGCCTCCAACCTTGTAGGATAGCTTCAAAAAGGTTACTTTCATTGATTATGATAGATAGACAAGAGTTTAGGTGCTTATTAGAGAACAAGGCTCCTGCTTGAATCCTTATTGTTGCTTTGATAACATTGGAGGATTGAGGTGTTGCCACATGTTGCTGAATGGATGCTAATATGAGTATAACTCAACGGTAATTGATATCACATCTACCCCTTTTCTTGAGGTCAAAGGTTCATTTCTCCGTACCTGCAACATTTGTTGTACTAAAAAAAAAGTTGTTGGGTGGCTGGTTGTTTTTCAGTATCCATGAGATAACGGCAAGGGCAAATGAACCTAAAAGTATAAGCTGATAGGTTACACTAAAATTTAATCTTTTATTCATATTCCTTAACAATCCTCTTCATTGTGGGCTTGGAAATTAGTTCGAGGGCCAACGAGTGCTTAACAATATTAATTGAATGGAATTAATGTTATAGTGATTTGAATATATGACTTGCTGCTCAAAATTATGTTAAATAACTATTGAACCCAAAATCTTTTCATTATAGATAGTTTTATCTTTTGTTCGTAGTTTGAATTTAGAAGTTATAATCTTATGTTCATATTTTGAATATAGAAAGTTTAATTTTTTGTTCATATTTTGAATGACCAATTGTAGTTATTTGTGTGGTACATGGGTGGGTTTCTCGTCTTCTAATTAACTTGTATATTAAGTGTTGGTTTGGTTATCCCATATTTTTATAATCTTAATTGATGAATCATCCTGTAACCTGTTAGGAATTTGGGAAGTTTCTTGGGGAACTGTAATTTTATACAAGTCCCGAAGGCTTTCATTTGTATAATTTTTTTTAATCTTTCCCTCTTATCATATTGAATGTTACATCTATGTGATATCAAGTAAATTATGATAAGCAATTTCCTCACTAGTCATATTAATGCCATTATCACATGGATTTTTGGGCAGATAAGGATTAAAATTTGAGAGGAGAGAGCAAAGGCATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGGTATTCTATACATATAATGTTATCCTTTTTTGTACAAGTACCATATGGTATAACTTAGGAATTCTTCATCCATTTCACTGTCATCCTCTAGTTTTAGTTCTTGATTTTGGACTATTCTCTTATTGTGCACCATTTGGGACTATAGTTTCTGGGTTTAGGATGCTAATCCCTTATTGTGCTGTTTGGATTCTTGAAATTTGAGTAAAGCATTTGAATTTTGAGCATTTCTCTTGTTACCACTTCAGCCTATATTGGGGTTCATAGAACGGTTTTGATTTACTTTTTTGCTTACTCTTGACATACCTTGTAGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGTTCAACAATTATTATCCTCTTAAAGACTGTCACTGGTTTGATTTTACTTCCTATTTTTTTTTTTTTTACTCTTCTCTCTTTTCATATTTGCAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTAAGTGAAACTTATCTCTCATTATTGCTGGCTCACCACTTTTTCTTAGATTTGTTTATTATTTTCATACCAGTGTGTAGACCATTGCAAATTATAGTTCTATGACATCTATTCAATCAATGGAGTCACGATAAAGAAATTGAAATACTGAAAAACCAACTTCCATTAATGTCATACTTAGAATATCTATCATTTGACTGTTGCATCATGCCGTTTACAGAGTCTCTTTCCCTTCATAATTACTGTTTGGTGTCCAGAGTATTATTTACGTTGAGAAGTATACTGAGAGGTGCGAATCCTTCAGCCCTGGGCTGGGAAACACTCCATACGGTAGATCCCTACCTGAAAAGACACACCATGTCCACTCTCATCTCTCCTTCCCCATATGTATGCGCCTCGACTTCTAACTGTTGGAGTTGGCATTCTCCATTTTACCTTTGAAAATATGTGAACTATAGGGGTATAACATAGAAATGAAAATTTACTGTGTGAACAAAGGAAGTAGATACCGTAGAATTTCTAGGAATTTTCTATAACAACTACTGCTAGCATATGTTGTCTTCTTTGTGCTTTCCCTTTCGGGCTTTCCCTTTCGGGCTTTCCCTCAAGGCTTTTAAAACGCGTCTGCTAGGGAGAGGTTCCACACCCTTATAAAGGGTGTTTCGTTCTTATCCTCAACCGATGTAGGATCTCACAATCCACCTTTCTTCGGATCCCAGCGTCCTCGCTAGCACTCGTTCCTTTCTCCAATCTATGTGAGATCCCCAATCCACCTCCTTTGGGGCCTAGTGTCCTTGCTAACAAACCGCCTCGTGTCCACCCCCCTTCGGGGCTCAGCCTCCTCGATGGCACATATGTCTAGCTCTGATACCATTTGTAACAACTCAAGCCCACCGTTAATAGATATTGTTCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCGAGGTTTTTAAAACACGTATACTAGGGAGAGGTTTCCACACCCTTCGGTGTTTCGTTCTTCTCCCCAACTGATGTGGGATCTCACATTTTTCCTCTAAGCATCATCTATAATCTATAAAAAATAAAGTGATGTACCCTTGAGCAGTAATACGCCCTACAAGCCACATTTTACCCAAAAGTTTCCTATGCAATCTTAGATATCCCATCATAATAGAATAAGTAGTATTGCAGAAGTTGAATTCTTGTATTACGTGCAGGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAATCACCTCAAAGCTTCCTTCCTATAAGGCATAGAAGTAGTTATCAAAACCTGAAGGTATGATGAGTATGTTTATCACTTGGTTGCTTCTGATAATAAGGCCATTTTATATTTTCATGTACATCTTCCACTTCTTTATCATCTGAGAACTTCAATCATTATTGCAGCGTTAAGCAAAAAATAACCTTATTGATTGTAATCGTCCTTGATCTAAAACTTTCCTCTTGTTCTGAGGATGAGTCGGCAATAATTTATTACATTGTGAAAATAGAAAATGTTCTGGATATTGGATTCATCTACTGGAAAAATCATTCCCAATTTTGTTACCACTTATAATTGTCCTATGGCCATTAGTATCACTATATTTGGGGGATAAATGACTGTATATTCTTATTTTATTCAAGAATCTTAATTAAACCCATTGTTTCTTAGAAGCTTATTAATAGAGCATTTAGTTGCTAGCATCATAGCTTCAAATCTTATATGGGTAAAATTTGGAGCAATCCTTTTACTCCAAAAGCATCAAAATGTATTTTTACCTTTACCTTCATTAAAGGTTTGTCAATATTGTAATTGTTAAGAATCCCGATCCCACATTTATCTCTATTACAAGGTATGTTAATACGATGGATGTTGAATTTCTACTATTGAACAATCAATTTAGATTTCTAATGATAGGAGGTGCGGGAGCTTGTCGTTGACAATTGAATTTCTATCGTTTCTTCCGTGTACTCTTCCTAGGCATTGACTTGAGTATTTGAGTCATTAAGCAAATATTGACATTGGTATGTTTTTTTTTTCTATACATCAACAATGATTTGTTTTGCAAGGACAGAGAAATTTATTAGGTCCTCTGATATGAAAAGAACGTGCCCTAAGGTCTGAATTTATGGACAACAAAGGTGCAAGCCATGATGGCAAAGCACATGCTGCAAAACAAAATAGTATCACATAATGAAGTTACATTAGAACTTTCACTTTCTCATTTGGTAAAAATGGGAACTTTATGGTAAGCCCGTGATATAAATATTGATATTATATCATGAAAATGATTTATATTATCATAAAAGATGATATCATTTCAAGCAATATACGCTGTTCTAGGTTAATTTTGAATATTATAAACATATAATGAATACTTGGAAGATATTGTGAGATTATTTGGAATACCTGGTTCAATATGCCATTATTATTACATGTTGTATGGACCTTCAAATGGCATGCCTTTGCTTCTCACGATTAGATTAGCAAAAAAGTGACCAAATTTCAATGCCTAATTGATTTACTAAACTATATTCTCTTCTCTCATGTAGTGAAATGATTATTTTTAAGCATTCTCGAGCCTTTTTTCTTGCAAGCTTATTAGACATCAAATCATAAACTTAGCTCTTGTTTGATGGCTGGTCTAAGACACAAAATCAAAAGCTTAACTCGTGTCTTTTGTAAGTGCTTTTTCTTCTACAGCTTCTGTCGCACATTGTGATGGCGTCGGTGCATGTGTTTGTAGAATACACCGGAGCTGAGTTTAACGACGTCAAAATTTGTGAGGTTCCCATTAACCCAAATTTAGAAGAGTTTCACTTTCTTTCATCGTTTTCTATTGACTTTGATAGCTACCGTTCTTTCACTATTGGAGTTTCCAACGTTTCATGAGGCTCCCTTGTGCTGCCATAAAAAAGGTAATTAAATCTCCACCAACATATATATACGTACTTTTCACTCTTGTTCATGTTGGTGGTCTTAATAGTGCACATTGAATCTTAAGGTAAATGTGAGGGTTTTTTTTAGTAGGATGTTAGATCAAGCACGGGTTGAGTATCGAACTTGATTACGTGCATCAATTGATTATATTAGGCTTTTTTTTTGTTTTCCTCACGTCAATCACACAAACTTCTTATCCACTCTCATTCGATTATAGTTGATTATAGTGGAAAGCAAGTATAACTCGAGTTTAAAGAATTTACAAACCTCTAGAAATCAAAACTCGTGATACAAAAATAGCCACATAAACACGTAGGATTTGGTCAATGAGGAGTGGAAATAGTAGGATAATTATTATTTTTTAGGCATAAAACTTTGAGAGGGG

mRNA sequence

TGATAAAGAAATAAAATCAAAGCCCAATCCCATTGCTCAATCGTCCTCTCCGTTAGCTTCCGCAAGGTTCCATCGCAGCGTTCACGCGCCGCCCCTTCTCCTCCTTCTCGCTCGGTGCCGCTTCTCCTTCCTCTCTCATGCCGCGTCGCAGCTCTGTTTCTCGTCTCTGATTTTTGTCGGCTGCCATCCTTTCGTATCAGATAAGGATTAAAATTTGAGAGGAGAGAGCAAAGGCATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAATCACCTCAAAGCTTCCTTCCTATAAGGCATAGAAGTAGTTATCAAAACCTGAAGGACAGAGAAATTTATTAGGTCCTCTGATATGAAAAGAACGTGCCCTAAGGTCTGAATTTATGGACAACAAAGGTGCAAGCCATGATGGCAAAGCACATGCTGCAAAACAAAATAGTATCACATAATGAAGTTACATTAGAACTTTCACTTTCTCATTTGGTAAAAATGGGAACTTTATGGTAAGCCCGTGATATAAATATTGATATTATATCATGAAAATGATTTATATTATCATAAAAGATGATATCATTTCAAGCAATATACGCTGTTCTAGGTTAATTTTGAATATTATAAACATATAATGAATACTTGGAAGATATTGTGAGATTATTTGGAATACCTGGTTCAATATGCCATTATTATTACATGTTGTATGGACCTTCAAATGGCATGCCTTTGCTTCTCACGATTAGATTAGCAAAAAAGTGACCAAATTTCAATGCCTAATTGATTTACTAAACTATATTCTCTTCTCTCATGTAGTGAAATGATTATTTTTAAGCATTCTCGAGCCTTTTTTCTTGCAAGCTTATTAGACATCAAATCATAAACTTAGCTCTTGTTTGATGGCTGGTCTAAGACACAAAATCAAAAGCTTAACTCGTGTCTTTTGTAAGTGCTTTTTCTTCTACAGCTTCTGTCGCACATTGTGATGGCGTCGGTGCATGTGTTTGTAGAATACACCGGAGCTGAGTTTAACGACGTCAAAATTTGTGAGGTTCCCATTAACCCAAATTTAGAAGAGTTTCACTTTCTTTCATCGTTTTCTATTGACTTTGATAGCTACCGTTCTTTCACTATTGGAGTTTCCAACGTTTCATGAGGCTCCCTTGTGCTGCCATAAAAAAGGTAATTAAATCTCCACCAACATATATATACGTACTTTTCACTCTTGTTCATGTTGGTGGTCTTAATAGTGCACATTGAATCTTAAGGTAAATGTGAGGGTTTTTTTTAGTAGGATGTTAGATCAAGCACGGGTTGAGTATCGAACTTGATTACGTGCATCAATTGATTATATTAGGCTTTTTTTTTGTTTTCCTCACGTCAATCACACAAACTTCTTATCCACTCTCATTCGATTATAGTTGATTATAGTGGAAAGCAAGTATAACTCGAGTTTAAAGAATTTACAAACCTCTAGAAATCAAAACTCGTGATACAAAAATAGCCACATAAACACGTAGGATTTGGTCAATGAGGAGTGGAAATAGTAGGATAATTATTATTTTTTAGGCATAAAACTTTGAGAGGGG

Coding sequence (CDS)

ATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA
Homology
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BLAST of CmoCh13G001540 vs. Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-52
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 1 

Query: 4   RLLIQRLTPFLVARIRENQRLLS-SSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRR 63
           R L++R+ P+L  RIREN RLL+ SS SA +EASS  +S   SSS   D + ++DNCIRR
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSN--DVVHLSDNCIRR 62

Query: 64  MKELQAPK-EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFV 123
           MKELQ+ + E+KMLRL VETGGCSGFQY F+LD++TNPDDRV+EK GV+LVVDN+SYD V
Sbjct: 63  MKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLV 122

Query: 124 KGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           KGATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 KGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

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BLAST of CmoCh13G001540 vs. Swiss-Prot
Match: ISCA2_MOUSE (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1 

Query: 53  IQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLV 112
           I++TD+C++R+ E+    E   LRL VE GGCSGFQY F LD   NPDDRV+E+ G R+V
Sbjct: 50  IRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQYKFSLDTVINPDDRVFEQGGARVV 109

Query: 113 VDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           VD+ S  FVKGA +D+ +ELIRS+F V  NP A  GCSC SSF VK
Sbjct: 110 VDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVK 153

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BLAST of CmoCh13G001540 vs. Swiss-Prot
Match: ISCA2_PONAB (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 1 

Query: 23  RLLSSSVS--AHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSVE 82
           RLL++S+   A +EASS  +SP          I++TD+C++R+ E+    E   LRL VE
Sbjct: 24  RLLAASLGPQARREASS--SSPEAGEG----QIRLTDSCVQRLLEITEGSE--FLRLQVE 83

Query: 83  TGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVS 142
            GGCSGFQY F LD   NPDDRV+E+ G R+VVD+ S  FVKGA +D+ +ELIRS+F V 
Sbjct: 84  GGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVL 143

Query: 143 TNPSAVGGCSCKSSFMVK 159
            NP A  GCSC SSF +K
Sbjct: 144 NNPQAQQGCSCGSSFSIK 153

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BLAST of CmoCh13G001540 vs. Swiss-Prot
Match: ISCA2_HUMAN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 1 

Query: 23  RLLSSSVS--AHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSVE 82
           RLL++S+   A +EASS  +SP          I++TD+C++R+ E+    E   LRL VE
Sbjct: 24  RLLTASLGPQARREASS--SSPEAGEG----QIRLTDSCVQRLLEITEGSE--FLRLQVE 83

Query: 83  TGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVS 142
            GGCSGFQY F LD   NPDDRV+E+ G R+VVD+ S  FVKGA +D+ +ELIRS+F V 
Sbjct: 84  GGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVL 143

Query: 143 TNPSAVGGCSCKSSFMVK 159
            NP A  GCSC SSF +K
Sbjct: 144 NNPQAQQGCSCGSSFSIK 153

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BLAST of CmoCh13G001540 vs. Swiss-Prot
Match: ISCA2_BOVIN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 1 

Query: 20  ENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSV 79
           +  RLL++S           +SP          I +TD+C++R+ E+    E   LRL V
Sbjct: 19  QRSRLLAASRGPRALREVSFSSPEAGEG----QIHLTDSCVQRLLEITEGSE--FLRLEV 78

Query: 80  ETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVV 139
           E GGCSGFQY F LD   NPDDRV+EK G R+VVD+ S  FVKGA +D+ +ELIRS+F V
Sbjct: 79  EGGGCSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQV 138

Query: 140 STNPSAVGGCSCKSSFMVK 159
             NP A  GCSC SSF VK
Sbjct: 139 LNNPQAQQGCSCGSSFSVK 151

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BLAST of CmoCh13G001540 vs. TrEMBL
Match: A0A0A0LXX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.9e-69
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1 

Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

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BLAST of CmoCh13G001540 vs. TrEMBL
Match: A0A061EV31_THECC (Iron-sulfur cluster biosynthesis family protein isoform 1 OS=Theobroma cacao GN=TCM_022590 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.1e-57
Identity = 117/163 (71.78%), Postives = 138/163 (84.66%), Query Frame = 1 

Query: 4   RLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSS----GPIDTIQMTDNC 63
           R LIQR++PF +ARI++N +LL SS  +H  +SS L   SP SS      +D I++ DNC
Sbjct: 3   RSLIQRISPFFIARIKQNHKLLRSSSYSHNYSSSALHEASPESSESPSSSLDAIRIADNC 62

Query: 64  IRRMKELQAPKE---EKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNI 123
           ++RMKELQA +E   EK+LRLSVETGGCSGFQYVFDLDDKTNPDDRV+E+EGV+LVVDNI
Sbjct: 63  VKRMKELQASEESSHEKLLRLSVETGGCSGFQYVFDLDDKTNPDDRVFEREGVKLVVDNI 122

Query: 124 SYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           SYDFVKGAT+DYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 123 SYDFVKGATVDYVEELIRSAFLVTTNPSAVGGCSCKSSFMVKQ 165

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BLAST of CmoCh13G001540 vs. TrEMBL
Match: M5WAY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 1 

Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSSSV---SAHQEASSLLASPSPSSSGPIDTIQMT 60
           MAPR L++ RLTPF  ARIR+NQRLLSSS    SA +EASS  +S SPS    +D + MT
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPS----LDAVVMT 60

Query: 61  DNCIRRMKELQAPKEE-KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           D C++RMK+LQA + E KMLRLSVETGGCSGFQYVFDLDDKT+PDDRV+EKEGV+LVVDN
Sbjct: 61  DTCVQRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVFEKEGVKLVVDN 120

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           +SYDFVKGAT+DYVEELIRSAF V+TNPSAVGGCSCKSSFMVK
Sbjct: 121 VSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

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BLAST of CmoCh13G001540 vs. TrEMBL
Match: A0A140B491_PRUPE (Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 1 

Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSSSV---SAHQEASSLLASPSPSSSGPIDTIQMT 60
           MAPR L++ RLTPF  ARIR+NQRLLSSS    SA +EASS  +S SPS    +D + MT
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPS----LDAVVMT 60

Query: 61  DNCIRRMKELQAPKEE-KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           D C++RMK+LQA + E KMLRLSVETGGCSGFQYVFDLDDKT+PDDRV+EKEGV+LVVDN
Sbjct: 61  DTCVQRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVFEKEGVKLVVDN 120

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           +SYDFVKGAT+DYVEELIRSAF V+TNPSAVGGCSCKSSFMVK
Sbjct: 121 VSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

[Close]
BLAST of CmoCh13G001540 vs. TrEMBL
Match: A0A0B0MTF5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-56
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 1 

Query: 4   RLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRRM 63
           R LIQR++PF +ARI++N +LLSSS S+   A    +S SPS S  +D + MTDNCI+RM
Sbjct: 11  RSLIQRISPFFIARIKQNHKLLSSSFSSSSSALHEASSESPSPS--LDAVHMTDNCIKRM 70

Query: 64  KELQAPKEE---KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 123
           KELQA ++    KMLRLSVETGGCSGFQYVFDLDDKTNPDDRV+ +EGV+LVVD+ISYDF
Sbjct: 71  KELQASEQSSDHKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISYDF 130

Query: 124 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVV+TNPSAVGGCSCKSSFMVKQ
Sbjct: 131 VKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 167

[Close]
BLAST of CmoCh13G001540 vs. TAIR10
Match: AT5G03905.1 (AT5G03905.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 207.2 bits (526), Expect = 7.4e-54
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 1 

Query: 4   RLLIQRLTPFLVARIRENQRLLS-SSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRR 63
           R L++R+ P+L  RIREN RLL+ SS SA +EASS  +S   SSS   D + ++DNCIRR
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSN--DVVHLSDNCIRR 62

Query: 64  MKELQAPK-EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFV 123
           MKELQ+ + E+KMLRL VETGGCSGFQY F+LD++TNPDDRV+EK GV+LVVDN+SYD V
Sbjct: 63  MKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLV 122

Query: 124 KGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           KGATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 KGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]
BLAST of CmoCh13G001540 vs. TAIR10
Match: AT2G36260.1 (AT2G36260.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 1 

Query: 53  IQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLV 112
           + ++D    R+++L   +++  LRL+VE  GC+G  YV +   +    D V E++GV+++
Sbjct: 6   LALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKIL 65

Query: 113 VDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSF 156
           VD  +   V G  +D+V++ +RS FV   NP+A   C C  SF
Sbjct: 66  VDPKAVMHVIGTEMDFVDDKLRSEFVF-VNPNAT-KCGCGESF 106

[Close]
BLAST of CmoCh13G001540 vs. TAIR10
Match: AT2G16710.3 (AT2G16710.3 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 42/132 (31.82%), Postives = 72/132 (54.55%), Query Frame = 1 

Query: 34  EASSLLASPSPSSSGPI---DTIQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYV 93
           +AS +LA+ + +  GP      + +TD    R+  L   +++  LRL V+  GC+G  Y 
Sbjct: 2   KASQILAAAA-ARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYT 61

Query: 94  FDLDDKTNPDDR------VYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPS 153
            +   KT+ +D       + E++GVR++V+  +   V G  +D+V++ +RS FV   NP+
Sbjct: 62  LNYAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVF-INPN 121

Query: 154 AVGGCSCKSSFM 157
           + G C C  SFM
Sbjct: 122 SQGQCGCGESFM 131

[Close]
BLAST of CmoCh13G001540 vs. NCBI nr
Match: gi|659115364|ref|XP_008457520.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 1 

Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS +A+QEASSL +SPSPS S P+DTI MTD+CI
Sbjct: 134 MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 193

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KT PDDR+YEKEGV+LVVDNISYDF
Sbjct: 194 RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 253

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 254 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 292

[Close]
BLAST of CmoCh13G001540 vs. NCBI nr
Match: gi|659115367|ref|XP_008457521.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 1 

Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS +A+QEASSL +SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KT PDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]
BLAST of CmoCh13G001540 vs. NCBI nr
Match: gi|449470384|ref|XP_004152897.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-68
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1 

Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

[Close]
BLAST of CmoCh13G001540 vs. NCBI nr
Match: gi|449459108|ref|XP_004147288.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 8.7e-65
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1 

Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQRLTP+L A IR+NQRLLSSSVSA+QEASS L +PS      IDTI M+DNCI
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAG----IDTIHMSDNCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ P EEKMLRLSVE GGCSGFQYVF+LDDKTNPDDRV EKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 155

[Close]
BLAST of CmoCh13G001540 vs. NCBI nr
Match: gi|1009161173|ref|XP_015898754.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 125/164 (76.22%), Postives = 144/164 (87.80%), Query Frame = 1 

Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSS-SVSAHQEASSLLASPSPSSSGPIDTIQMTDN 60
           MAPR L++ RLTP+  ARIR+NQRLLSS S SA QE SS  +SPSPS S  +D + MT+ 
Sbjct: 60  MAPRSLILHRLTPYFAARIRQNQRLLSSYSSSALQEVSS--SSPSPSPSPSLDAVDMTET 119

Query: 61  CIRRMKELQAPK---EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           CIRR+K+LQ+ +   EEKMLRLSVETGGCSGFQYVFDLD+KTNPDDRV+E+EGV+L+VDN
Sbjct: 120 CIRRIKDLQSSEPSSEEKMLRLSVETGGCSGFQYVFDLDNKTNPDDRVFEREGVKLIVDN 179

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           ISYDFVKGAT+DYVEELIRSAFVV+TNPSAVGGCSCKSSFMVKQ
Sbjct: 180 ISYDFVKGATVDYVEELIRSAFVVATNPSAVGGCSCKSSFMVKQ 221

The following BLAST results are available for this feature:
BLAST of CmoCh13G001540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ISAM2_ARATH1.3e-5270.06Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ... [more]
ISCA2_MOUSE7.2e-2757.55Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 P... [more]
ISCA2_PONAB7.2e-2751.45Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 P... [more]
ISCA2_HUMAN7.2e-2751.45Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 P... [more]
ISCA2_BOVIN2.1e-2648.92Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=... [more]
BLAST of CmoCh13G001540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXX8_CUCSA6.9e-6986.79Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1[more]
A0A061EV31_THECC6.1e-5771.78Iron-sulfur cluster biosynthesis family protein isoform 1 OS=Theobroma cacao GN=... [more]
M5WAY8_PRUPE8.0e-5775.46Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1[more]
A0A140B491_PRUPE8.0e-5775.46Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3... [more]
A0A0B0MTF5_GOSAR2.3e-5674.21Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1[more]
BLAST of CmoCh13G001540 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G03905.17.4e-5470.06 Iron-sulphur cluster biosynthesis family protein[more]
AT2G36260.12.0e-1133.98 Iron-sulphur cluster biosynthesis family protein[more]
AT2G16710.32.0e-1131.82 Iron-sulphur cluster biosynthesis family protein[more]
BLAST of CmoCh13G001540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115364|ref|XP_008457520.1|1.8e-7086.79PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C... [more]
gi|659115367|ref|XP_008457521.1|1.8e-7086.79PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C... [more]
gi|449470384|ref|XP_004152897.1|1.0e-6886.79PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sati... [more]
gi|449459108|ref|XP_004147288.1|8.7e-6583.65PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C... [more]
gi|1009161173|ref|XP_015898754.1|1.2e-5876.22PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Ziziphus juj... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR016092FeS_cluster_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0097428 protein maturation by iron-sulfur cluster transfer
cellular_component GO:0005575 cellular_component
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G001540.1CmoCh13G001540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisGENE3DG3DSA:2.60.300.12coord: 52..143
score: 7.1
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 53..152
score: 1.4
IPR000361FeS cluster biogenesisunknownSSF89360HesB-like domaincoord: 52..145
score: 1.29
IPR016092FeS cluster insertion proteinTIGRFAMsTIGR00049TIGR00049coord: 53..157
score: 4.3
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 3..158
score: 4.6
NoneNo IPR availablePANTHERPTHR10072:SF46IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 3..158
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G001540Cucsa.213580Cucumber (Gy14) v1cgycmoB0615
CmoCh13G001540CmaCh13G001490Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G001540Cla008271Watermelon (97103) v1cmowmB173
CmoCh13G001540Csa1G496290Cucumber (Chinese Long) v2cmocuB204
CmoCh13G001540MELO3C020686Melon (DHL92) v3.5.1cmomeB181
CmoCh13G001540ClCG03G001800Watermelon (Charleston Gray)cmowcgB184
CmoCh13G001540CSPI01G22630Wild cucumber (PI 183967)cmocpiB206
CmoCh13G001540Lsi02G013830Bottle gourd (USVL1VR-Ls)cmolsiB191
CmoCh13G001540Cp4.1LG20g08750Cucurbita pepo (Zucchini)cmocpeB202
CmoCh13G001540MELO3C020686.2Melon (DHL92) v3.6.1cmomedB203
CmoCh13G001540CsaV3_1G033770Cucumber (Chinese Long) v3cmocucB0236
CmoCh13G001540Cla97C03G052790Watermelon (97103) v2cmowmbB209
CmoCh13G001540Bhi08G000573Wax gourdcmowgoB0245
CmoCh13G001540CsGy1G022180Cucumber (Gy14) v2cgybcmoB069
CmoCh13G001540Carg21025Silver-seed gourdcarcmoB0989
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G001540Cucurbita pepo (Zucchini)cmocpeB205
CmoCh13G001540Bottle gourd (USVL1VR-Ls)cmolsiB184
CmoCh13G001540Bottle gourd (USVL1VR-Ls)cmolsiB186
CmoCh13G001540Cucumber (Gy14) v2cgybcmoB454
CmoCh13G001540Cucumber (Gy14) v2cgybcmoB711
CmoCh13G001540Melon (DHL92) v3.6.1cmomedB197
CmoCh13G001540Melon (DHL92) v3.6.1cmomedB198
CmoCh13G001540Melon (DHL92) v3.6.1cmomedB218
CmoCh13G001540Silver-seed gourdcarcmoB0594
CmoCh13G001540Cucumber (Chinese Long) v3cmocucB0248
CmoCh13G001540Cucumber (Chinese Long) v3cmocucB0255
CmoCh13G001540Watermelon (97103) v2cmowmbB204
CmoCh13G001540Watermelon (97103) v2cmowmbB207
CmoCh13G001540Watermelon (97103) v2cmowmbB217
CmoCh13G001540Wax gourdcmowgoB0237
CmoCh13G001540Wax gourdcmowgoB0238
CmoCh13G001540Cucurbita moschata (Rifu)cmocmoB173
CmoCh13G001540Cucurbita moschata (Rifu)cmocmoB180
CmoCh13G001540Cucurbita maxima (Rimu)cmacmoB458
CmoCh13G001540Cucurbita maxima (Rimu)cmacmoB543
CmoCh13G001540Cucurbita maxima (Rimu)cmacmoB577
CmoCh13G001540Melon (DHL92) v3.5.1cmomeB178
CmoCh13G001540Watermelon (Charleston Gray)cmowcgB180
CmoCh13G001540Watermelon (Charleston Gray)cmowcgB183
CmoCh13G001540Watermelon (97103) v1cmowmB197
CmoCh13G001540Watermelon (97103) v1cmowmB200