CmoCh13G001540.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G001540.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Iron-sulfur cluster insertion protein ErpA
Location	Cmo_Chr13 : 953797 .. 959767 (-)
Sequence length	2025

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATAAAGAAATAAAATCAAAGCCCAATCCCATTGCTCAATCGTCCTCTCCGTTAGCTTCCGCAAGGTTCCATCGCAGCGTTCACGCGCCGCCCCTTCTCCTCCTTCTCGCTCGGTGCCGCTTCTCCTTCCTCTCTCATGCCGCGTCGCAGCTCTGTTTCTCGTCTCTGATTTTTGTCGGCTGCCATCCTTTCGTATCAGGTATTAAATTGTGTATACTATAGTTTTAGAAGACCTGATTGTGAATTCATATGATATTTCTTTTGTTACTCTGTTGAGTTAATTGGTTATTTTTACTTCAAACTTCACTTAGGAATGATAGTTTTGAGATAAAAATTGTTTAATTTCGATATGCGTAGGAAGAAAACTGTTCATAAGCATGATTTTTGGAAGAAGTTAACTCAATAATTAAAATCGAGGGTTATTGATAAGAACTTAGGAAGGAAGAACTATGTGATTTTCGGCATGTAGTGTTTGTTATCAATGTTGTTTCGACCATCATAGCTATGTTGCAATTATTATGTTTTGGAAATACAATTATTGAGCTTTCACTCTGCTTGAACTGGTCTAAGTTACCCAATTGTTTCCTCCTAGGAAGATGGTCCACCATTTTGGAGTATACTTCCTTGTACGACCGAACCGTCCTCCTATGACTTTTCAAATGCCTCTAGATATAGTTTGTTATAATATAACATGACTTCCATTGAGCCATATTGTGGTCCTCATAAAGCTTGATCTGTAGTTATCCTAGTAAGTGCTAGTGATAAGCTTGGATGGGCAAGATTTAGTCTCAACGATGTATACTTTCAGCCTCCAACCTTGTAGGATAGCTTCAAAAAGGTTACTTTCATTGATTATGATAGATAGACAAGAGTTTAGGTGCTTATTAGAGAACAAGGCTCCTGCTTGAATCCTTATTGTTGCTTTGATAACATTGGAGGATTGAGGTGTTGCCACATGTTGCTGAATGGATGCTAATATGAGTATAACTCAACGGTAATTGATATCACATCTACCCCTTTTCTTGAGGTCAAAGGTTCATTTCTCCGTACCTGCAACATTTGTTGTACTAAAAAAAAAGTTGTTGGGTGGCTGGTTGTTTTTCAGTATCCATGAGATAACGGCAAGGGCAAATGAACCTAAAAGTATAAGCTGATAGGTTACACTAAAATTTAATCTTTTATTCATATTCCTTAACAATCCTCTTCATTGTGGGCTTGGAAATTAGTTCGAGGGCCAACGAGTGCTTAACAATATTAATTGAATGGAATTAATGTTATAGTGATTTGAATATATGACTTGCTGCTCAAAATTATGTTAAATAACTATTGAACCCAAAATCTTTTCATTATAGATAGTTTTATCTTTTGTTCGTAGTTTGAATTTAGAAGTTATAATCTTATGTTCATATTTTGAATATAGAAAGTTTAATTTTTTGTTCATATTTTGAATGACCAATTGTAGTTATTTGTGTGGTACATGGGTGGGTTTCTCGTCTTCTAATTAACTTGTATATTAAGTGTTGGTTTGGTTATCCCATATTTTTATAATCTTAATTGATGAATCATCCTGTAACCTGTTAGGAATTTGGGAAGTTTCTTGGGGAACTGTAATTTTATACAAGTCCCGAAGGCTTTCATTTGTATAATTTTTTTTAATCTTTCCCTCTTATCATATTGAATGTTACATCTATGTGATATCAAGTAAATTATGATAAGCAATTTCCTCACTAGTCATATTAATGCCATTATCACATGGATTTTTGGGCAGATAAGGATTAAAATTTGAGAGGAGAGAGCAAAGGCATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGGTATTCTATACATATAATGTTATCCTTTTTTGTACAAGTACCATATGGTATAACTTAGGAATTCTTCATCCATTTCACTGTCATCCTCTAGTTTTAGTTCTTGATTTTGGACTATTCTCTTATTGTGCACCATTTGGGACTATAGTTTCTGGGTTTAGGATGCTAATCCCTTATTGTGCTGTTTGGATTCTTGAAATTTGAGTAAAGCATTTGAATTTTGAGCATTTCTCTTGTTACCACTTCAGCCTATATTGGGGTTCATAGAACGGTTTTGATTTACTTTTTTGCTTACTCTTGACATACCTTGTAGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGTTCAACAATTATTATCCTCTTAAAGACTGTCACTGGTTTGATTTTACTTCCTATTTTTTTTTTTTTTACTCTTCTCTCTTTTCATATTTGCAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTAAGTGAAACTTATCTCTCATTATTGCTGGCTCACCACTTTTTCTTAGATTTGTTTATTATTTTCATACCAGTGTGTAGACCATTGCAAATTATAGTTCTATGACATCTATTCAATCAATGGAGTCACGATAAAGAAATTGAAATACTGAAAAACCAACTTCCATTAATGTCATACTTAGAATATCTATCATTTGACTGTTGCATCATGCCGTTTACAGAGTCTCTTTCCCTTCATAATTACTGTTTGGTGTCCAGAGTATTATTTACGTTGAGAAGTATACTGAGAGGTGCGAATCCTTCAGCCCTGGGCTGGGAAACACTCCATACGGTAGATCCCTACCTGAAAAGACACACCATGTCCACTCTCATCTCTCCTTCCCCATATGTATGCGCCTCGACTTCTAACTGTTGGAGTTGGCATTCTCCATTTTACCTTTGAAAATATGTGAACTATAGGGGTATAACATAGAAATGAAAATTTACTGTGTGAACAAAGGAAGTAGATACCGTAGAATTTCTAGGAATTTTCTATAACAACTACTGCTAGCATATGTTGTCTTCTTTGTGCTTTCCCTTTCGGGCTTTCCCTTTCGGGCTTTCCCTCAAGGCTTTTAAAACGCGTCTGCTAGGGAGAGGTTCCACACCCTTATAAAGGGTGTTTCGTTCTTATCCTCAACCGATGTAGGATCTCACAATCCACCTTTCTTCGGATCCCAGCGTCCTCGCTAGCACTCGTTCCTTTCTCCAATCTATGTGAGATCCCCAATCCACCTCCTTTGGGGCCTAGTGTCCTTGCTAACAAACCGCCTCGTGTCCACCCCCCTTCGGGGCTCAGCCTCCTCGATGGCACATATGTCTAGCTCTGATACCATTTGTAACAACTCAAGCCCACCGTTAATAGATATTGTTCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCGAGGTTTTTAAAACACGTATACTAGGGAGAGGTTTCCACACCCTTCGGTGTTTCGTTCTTCTCCCCAACTGATGTGGGATCTCACATTTTTCCTCTAAGCATCATCTATAATCTATAAAAAATAAAGTGATGTACCCTTGAGCAGTAATACGCCCTACAAGCCACATTTTACCCAAAAGTTTCCTATGCAATCTTAGATATCCCATCATAATAGAATAAGTAGTATTGCAGAAGTTGAATTCTTGTATTACGTGCAGGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAATCACCTCAAAGCTTCCTTCCTATAAGGCATAGAAGTAGTTATCAAAACCTGAAGGTATGATGAGTATGTTTATCACTTGGTTGCTTCTGATAATAAGGCCATTTTATATTTTCATGTACATCTTCCACTTCTTTATCATCTGAGAACTTCAATCATTATTGCAGCGTTAAGCAAAAAATAACCTTATTGATTGTAATCGTCCTTGATCTAAAACTTTCCTCTTGTTCTGAGGATGAGTCGGCAATAATTTATTACATTGTGAAAATAGAAAATGTTCTGGATATTGGATTCATCTACTGGAAAAATCATTCCCAATTTTGTTACCACTTATAATTGTCCTATGGCCATTAGTATCACTATATTTGGGGGATAAATGACTGTATATTCTTATTTTATTCAAGAATCTTAATTAAACCCATTGTTTCTTAGAAGCTTATTAATAGAGCATTTAGTTGCTAGCATCATAGCTTCAAATCTTATATGGGTAAAATTTGGAGCAATCCTTTTACTCCAAAAGCATCAAAATGTATTTTTACCTTTACCTTCATTAAAGGTTTGTCAATATTGTAATTGTTAAGAATCCCGATCCCACATTTATCTCTATTACAAGGTATGTTAATACGATGGATGTTGAATTTCTACTATTGAACAATCAATTTAGATTTCTAATGATAGGAGGTGCGGGAGCTTGTCGTTGACAATTGAATTTCTATCGTTTCTTCCGTGTACTCTTCCTAGGCATTGACTTGAGTATTTGAGTCATTAAGCAAATATTGACATTGGTATGTTTTTTTTTTCTATACATCAACAATGATTTGTTTTGCAAGGACAGAGAAATTTATTAGGTCCTCTGATATGAAAAGAACGTGCCCTAAGGTCTGAATTTATGGACAACAAAGGTGCAAGCCATGATGGCAAAGCACATGCTGCAAAACAAAATAGTATCACATAATGAAGTTACATTAGAACTTTCACTTTCTCATTTGGTAAAAATGGGAACTTTATGGTAAGCCCGTGATATAAATATTGATATTATATCATGAAAATGATTTATATTATCATAAAAGATGATATCATTTCAAGCAATATACGCTGTTCTAGGTTAATTTTGAATATTATAAACATATAATGAATACTTGGAAGATATTGTGAGATTATTTGGAATACCTGGTTCAATATGCCATTATTATTACATGTTGTATGGACCTTCAAATGGCATGCCTTTGCTTCTCACGATTAGATTAGCAAAAAAGTGACCAAATTTCAATGCCTAATTGATTTACTAAACTATATTCTCTTCTCTCATGTAGTGAAATGATTATTTTTAAGCATTCTCGAGCCTTTTTTCTTGCAAGCTTATTAGACATCAAATCATAAACTTAGCTCTTGTTTGATGGCTGGTCTAAGACACAAAATCAAAAGCTTAACTCGTGTCTTTTGTAAGTGCTTTTTCTTCTACAGCTTCTGTCGCACATTGTGATGGCGTCGGTGCATGTGTTTGTAGAATACACCGGAGCTGAGTTTAACGACGTCAAAATTTGTGAGGTTCCCATTAACCCAAATTTAGAAGAGTTTCACTTTCTTTCATCGTTTTCTATTGACTTTGATAGCTACCGTTCTTTCACTATTGGAGTTTCCAACGTTTCATGAGGCTCCCTTGTGCTGCCATAAAAAAGGTAATTAAATCTCCACCAACATATATATACGTACTTTTCACTCTTGTTCATGTTGGTGGTCTTAATAGTGCACATTGAATCTTAAGGTAAATGTGAGGGTTTTTTTTAGTAGGATGTTAGATCAAGCACGGGTTGAGTATCGAACTTGATTACGTGCATCAATTGATTATATTAGGCTTTTTTTTTGTTTTCCTCACGTCAATCACACAAACTTCTTATCCACTCTCATTCGATTATAGTTGATTATAGTGGAAAGCAAGTATAACTCGAGTTTAAAGAATTTACAAACCTCTAGAAATCAAAACTCGTGATACAAAAATAGCCACATAAACACGTAGGATTTGGTCAATGAGGAGTGGAAATAGTAGGATAATTATTATTTTTTAGGCATAAAACTTTGAGAGGGG

mRNA sequence

TGATAAAGAAATAAAATCAAAGCCCAATCCCATTGCTCAATCGTCCTCTCCGTTAGCTTCCGCAAGGTTCCATCGCAGCGTTCACGCGCCGCCCCTTCTCCTCCTTCTCGCTCGGTGCCGCTTCTCCTTCCTCTCTCATGCCGCGTCGCAGCTCTGTTTCTCGTCTCTGATTTTTGTCGGCTGCCATCCTTTCGTATCAGATAAGGATTAAAATTTGAGAGGAGAGAGCAAAGGCATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAATCACCTCAAAGCTTCCTTCCTATAAGGCATAGAAGTAGTTATCAAAACCTGAAGGACAGAGAAATTTATTAGGTCCTCTGATATGAAAAGAACGTGCCCTAAGGTCTGAATTTATGGACAACAAAGGTGCAAGCCATGATGGCAAAGCACATGCTGCAAAACAAAATAGTATCACATAATGAAGTTACATTAGAACTTTCACTTTCTCATTTGGTAAAAATGGGAACTTTATGGTAAGCCCGTGATATAAATATTGATATTATATCATGAAAATGATTTATATTATCATAAAAGATGATATCATTTCAAGCAATATACGCTGTTCTAGGTTAATTTTGAATATTATAAACATATAATGAATACTTGGAAGATATTGTGAGATTATTTGGAATACCTGGTTCAATATGCCATTATTATTACATGTTGTATGGACCTTCAAATGGCATGCCTTTGCTTCTCACGATTAGATTAGCAAAAAAGTGACCAAATTTCAATGCCTAATTGATTTACTAAACTATATTCTCTTCTCTCATGTAGTGAAATGATTATTTTTAAGCATTCTCGAGCCTTTTTTCTTGCAAGCTTATTAGACATCAAATCATAAACTTAGCTCTTGTTTGATGGCTGGTCTAAGACACAAAATCAAAAGCTTAACTCGTGTCTTTTGTAAGTGCTTTTTCTTCTACAGCTTCTGTCGCACATTGTGATGGCGTCGGTGCATGTGTTTGTAGAATACACCGGAGCTGAGTTTAACGACGTCAAAATTTGTGAGGTTCCCATTAACCCAAATTTAGAAGAGTTTCACTTTCTTTCATCGTTTTCTATTGACTTTGATAGCTACCGTTCTTTCACTATTGGAGTTTCCAACGTTTCATGAGGCTCCCTTGTGCTGCCATAAAAAAGGTAATTAAATCTCCACCAACATATATATACGTACTTTTCACTCTTGTTCATGTTGGTGGTCTTAATAGTGCACATTGAATCTTAAGGTAAATGTGAGGGTTTTTTTTAGTAGGATGTTAGATCAAGCACGGGTTGAGTATCGAACTTGATTACGTGCATCAATTGATTATATTAGGCTTTTTTTTTGTTTTCCTCACGTCAATCACACAAACTTCTTATCCACTCTCATTCGATTATAGTTGATTATAGTGGAAAGCAAGTATAACTCGAGTTTAAAGAATTTACAAACCTCTAGAAATCAAAACTCGTGATACAAAAATAGCCACATAAACACGTAGGATTTGGTCAATGAGGAGTGGAAATAGTAGGATAATTATTATTTTTTAGGCATAAAACTTTGAGAGGGG

Coding sequence (CDS)

ATGGCCCCTAGATTGCTAATTCAGCGGTTAACACCATTCTTGGTGGCACGTATTCGAGAGAATCAGAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCATCTTCTTTGTTGGCATCTCCATCTCCATCTTCATCTGGGCCTATTGATACCATTCAAATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGCGCCAAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGATGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGATAGGGTGTATGAGAAGGAGGGAGTTCGATTGGTTGTCGATAATATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTCGAGGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA

Homology

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BLAST of CmoCh13G001540.1 vs. Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-52
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 4   RLLIQRLTPFLVARIRENQRLLS-SSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRR 63
           R L++R+ P+L  RIREN RLL+ SS SA +EASS  +S   SSS   D + ++DNCIRR
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSN--DVVHLSDNCIRR 62

Query: 64  MKELQAPK-EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFV 123
           MKELQ+ + E+KMLRL VETGGCSGFQY F+LD++TNPDDRV+EK GV+LVVDN+SYD V
Sbjct: 63  MKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLV 122

Query: 124 KGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           KGATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 KGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

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BLAST of CmoCh13G001540.1 vs. Swiss-Prot
Match: ISCA2_MOUSE (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 61/106 (57.55%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 53  IQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLV 112
           I++TD+C++R+ E+    E   LRL VE GGCSGFQY F LD   NPDDRV+E+ G R+V
Sbjct: 50  IRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQYKFSLDTVINPDDRVFEQGGARVV 109

Query: 113 VDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           VD+ S  FVKGA +D+ +ELIRS+F V  NP A  GCSC SSF VK
Sbjct: 110 VDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVK 153

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BLAST of CmoCh13G001540.1 vs. Swiss-Prot
Match: ISCA2_PONAB (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 1


Query: 23  RLLSSSVS--AHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSVE 82
           RLL++S+   A +EASS  +SP          I++TD+C++R+ E+    E   LRL VE
Sbjct: 24  RLLAASLGPQARREASS--SSPEAGEG----QIRLTDSCVQRLLEITEGSE--FLRLQVE 83

Query: 83  TGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVS 142
            GGCSGFQY F LD   NPDDRV+E+ G R+VVD+ S  FVKGA +D+ +ELIRS+F V 
Sbjct: 84  GGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVL 143

Query: 143 TNPSAVGGCSCKSSFMVK 159
            NP A  GCSC SSF +K
Sbjct: 144 NNPQAQQGCSCGSSFSIK 153

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BLAST of CmoCh13G001540.1 vs. Swiss-Prot
Match: ISCA2_HUMAN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 1


Query: 23  RLLSSSVS--AHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSVE 82
           RLL++S+   A +EASS  +SP          I++TD+C++R+ E+    E   LRL VE
Sbjct: 24  RLLTASLGPQARREASS--SSPEAGEG----QIRLTDSCVQRLLEITEGSE--FLRLQVE 83

Query: 83  TGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVS 142
            GGCSGFQY F LD   NPDDRV+E+ G R+VVD+ S  FVKGA +D+ +ELIRS+F V 
Sbjct: 84  GGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVL 143

Query: 143 TNPSAVGGCSCKSSFMVK 159
            NP A  GCSC SSF +K
Sbjct: 144 NNPQAQQGCSCGSSFSIK 153

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BLAST of CmoCh13G001540.1 vs. Swiss-Prot
Match: ISCA2_BOVIN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 1


Query: 20  ENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRRMKELQAPKEEKMLRLSV 79
           +  RLL++S           +SP          I +TD+C++R+ E+    E   LRL V
Sbjct: 19  QRSRLLAASRGPRALREVSFSSPEAGEG----QIHLTDSCVQRLLEITEGSE--FLRLEV 78

Query: 80  ETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVV 139
           E GGCSGFQY F LD   NPDDRV+EK G R+VVD+ S  FVKGA +D+ +ELIRS+F V
Sbjct: 79  EGGGCSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQV 138

Query: 140 STNPSAVGGCSCKSSFMVK 159
             NP A  GCSC SSF VK
Sbjct: 139 LNNPQAQQGCSCGSSFSVK 151

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BLAST of CmoCh13G001540.1 vs. TrEMBL
Match: A0A0A0LXX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.9e-69
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1


Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

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BLAST of CmoCh13G001540.1 vs. TrEMBL
Match: A0A061EV31_THECC (Iron-sulfur cluster biosynthesis family protein isoform 1 OS=Theobroma cacao GN=TCM_022590 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.1e-57
Identity = 117/163 (71.78%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 4   RLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSS----GPIDTIQMTDNC 63
           R LIQR++PF +ARI++N +LL SS  +H  +SS L   SP SS      +D I++ DNC
Sbjct: 3   RSLIQRISPFFIARIKQNHKLLRSSSYSHNYSSSALHEASPESSESPSSSLDAIRIADNC 62

Query: 64  IRRMKELQAPKE---EKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNI 123
           ++RMKELQA +E   EK+LRLSVETGGCSGFQYVFDLDDKTNPDDRV+E+EGV+LVVDNI
Sbjct: 63  VKRMKELQASEESSHEKLLRLSVETGGCSGFQYVFDLDDKTNPDDRVFEREGVKLVVDNI 122

Query: 124 SYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           SYDFVKGAT+DYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 123 SYDFVKGATVDYVEELIRSAFLVTTNPSAVGGCSCKSSFMVKQ 165

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BLAST of CmoCh13G001540.1 vs. TrEMBL
Match: M5WAY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSSSV---SAHQEASSLLASPSPSSSGPIDTIQMT 60
           MAPR L++ RLTPF  ARIR+NQRLLSSS    SA +EASS  +S SPS    +D + MT
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPS----LDAVVMT 60

Query: 61  DNCIRRMKELQAPKEE-KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           D C++RMK+LQA + E KMLRLSVETGGCSGFQYVFDLDDKT+PDDRV+EKEGV+LVVDN
Sbjct: 61  DTCVQRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVFEKEGVKLVVDN 120

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           +SYDFVKGAT+DYVEELIRSAF V+TNPSAVGGCSCKSSFMVK
Sbjct: 121 VSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

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BLAST of CmoCh13G001540.1 vs. TrEMBL
Match: A0A140B491_PRUPE (Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 1


Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSSSV---SAHQEASSLLASPSPSSSGPIDTIQMT 60
           MAPR L++ RLTPF  ARIR+NQRLLSSS    SA +EASS  +S SPS    +D + MT
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPS----LDAVVMT 60

Query: 61  DNCIRRMKELQAPKEE-KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           D C++RMK+LQA + E KMLRLSVETGGCSGFQYVFDLDDKT+PDDRV+EKEGV+LVVDN
Sbjct: 61  DTCVQRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVFEKEGVKLVVDN 120

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           +SYDFVKGAT+DYVEELIRSAF V+TNPSAVGGCSCKSSFMVK
Sbjct: 121 VSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

[Close]

BLAST of CmoCh13G001540.1 vs. TrEMBL
Match: A0A0B0MTF5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-56
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 1


Query: 4   RLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRRM 63
           R LIQR++PF +ARI++N +LLSSS S+   A    +S SPS S  +D + MTDNCI+RM
Sbjct: 11  RSLIQRISPFFIARIKQNHKLLSSSFSSSSSALHEASSESPSPS--LDAVHMTDNCIKRM 70

Query: 64  KELQAPKEE---KMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 123
           KELQA ++    KMLRLSVETGGCSGFQYVFDLDDKTNPDDRV+ +EGV+LVVD+ISYDF
Sbjct: 71  KELQASEQSSDHKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISYDF 130

Query: 124 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVV+TNPSAVGGCSCKSSFMVKQ
Sbjct: 131 VKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 167

[Close]

BLAST of CmoCh13G001540.1 vs. TAIR10
Match: AT5G03905.1 (AT5G03905.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 207.2 bits (526), Expect = 7.4e-54
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 4   RLLIQRLTPFLVARIRENQRLLS-SSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCIRR 63
           R L++R+ P+L  RIREN RLL+ SS SA +EASS  +S   SSS   D + ++DNCIRR
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSN--DVVHLSDNCIRR 62

Query: 64  MKELQAPK-EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDFV 123
           MKELQ+ + E+KMLRL VETGGCSGFQY F+LD++TNPDDRV+EK GV+LVVDN+SYD V
Sbjct: 63  MKELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLV 122

Query: 124 KGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 159
           KGATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 KGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]

BLAST of CmoCh13G001540.1 vs. TAIR10
Match: AT2G36260.1 (AT2G36260.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 1


Query: 53  IQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLV 112
           + ++D    R+++L   +++  LRL+VE  GC+G  YV +   +    D V E++GV+++
Sbjct: 6   LALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKIL 65

Query: 113 VDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSF 156
           VD  +   V G  +D+V++ +RS FV   NP+A   C C  SF
Sbjct: 66  VDPKAVMHVIGTEMDFVDDKLRSEFVF-VNPNAT-KCGCGESF 106

[Close]

BLAST of CmoCh13G001540.1 vs. TAIR10
Match: AT2G16710.3 (AT2G16710.3 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11
Identity = 42/132 (31.82%), Postives = 72/132 (54.55%), Query Frame = 1


Query: 34  EASSLLASPSPSSSGPI---DTIQMTDNCIRRMKELQAPKEEKMLRLSVETGGCSGFQYV 93
           +AS +LA+ + +  GP      + +TD    R+  L   +++  LRL V+  GC+G  Y 
Sbjct: 2   KASQILAAAA-ARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYT 61

Query: 94  FDLDDKTNPDDR------VYEKEGVRLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPS 153
            +   KT+ +D       + E++GVR++V+  +   V G  +D+V++ +RS FV   NP+
Sbjct: 62  LNYAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVF-INPN 121

Query: 154 AVGGCSCKSSFM 157
           + G C C  SFM
Sbjct: 122 SQGQCGCGESFM 131

[Close]

BLAST of CmoCh13G001540.1 vs. NCBI nr
Match: gi|659115364|ref|XP_008457520.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS +A+QEASSL +SPSPS S P+DTI MTD+CI
Sbjct: 134 MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 193

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KT PDDR+YEKEGV+LVVDNISYDF
Sbjct: 194 RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 253

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 254 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 292

[Close]

BLAST of CmoCh13G001540.1 vs. NCBI nr
Match: gi|659115367|ref|XP_008457521.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 138/159 (86.79%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS +A+QEASSL +SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KT PDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CmoCh13G001540.1 vs. NCBI nr
Match: gi|449470384|ref|XP_004152897.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-68
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1


Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of CmoCh13G001540.1 vs. NCBI nr
Match: gi|449459108|ref|XP_004147288.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 8.7e-65
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1


Query: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60
           M PR LIQRLTP+L A IR+NQRLLSSSVSA+QEASS L +PS      IDTI M+DNCI
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAG----IDTIHMSDNCI 60

Query: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120
           RRMKELQ P EEKMLRLSVE GGCSGFQYVF+LDDKTNPDDRV EKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           VKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 155

[Close]

BLAST of CmoCh13G001540.1 vs. NCBI nr
Match: gi|1009161173|ref|XP_015898754.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 125/164 (76.22%), Postives = 144/164 (87.80%), Query Frame = 1


Query: 1   MAPR-LLIQRLTPFLVARIRENQRLLSS-SVSAHQEASSLLASPSPSSSGPIDTIQMTDN 60
           MAPR L++ RLTP+  ARIR+NQRLLSS S SA QE SS  +SPSPS S  +D + MT+ 
Sbjct: 60  MAPRSLILHRLTPYFAARIRQNQRLLSSYSSSALQEVSS--SSPSPSPSPSLDAVDMTET 119

Query: 61  CIRRMKELQAPK---EEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDN 120
           CIRR+K+LQ+ +   EEKMLRLSVETGGCSGFQYVFDLD+KTNPDDRV+E+EGV+L+VDN
Sbjct: 120 CIRRIKDLQSSEPSSEEKMLRLSVETGGCSGFQYVFDLDNKTNPDDRVFEREGVKLIVDN 179

Query: 121 ISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 160
           ISYDFVKGAT+DYVEELIRSAFVV+TNPSAVGGCSCKSSFMVKQ
Sbjct: 180 ISYDFVKGATVDYVEELIRSAFVVATNPSAVGGCSCKSSFMVKQ 221

The following BLAST results are available for this feature:

BLAST of CmoCh13G001540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ISAM2_ARATH	1.3e-52	70.06	Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ...	[more]
ISCA2_MOUSE	7.2e-27	57.55	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 P...	[more]
ISCA2_PONAB	7.2e-27	51.45	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 P...	[more]
ISCA2_HUMAN	7.2e-27	51.45	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 P...	[more]
ISCA2_BOVIN	2.1e-26	48.92	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=...	[more]

BLAST of CmoCh13G001540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXX8_CUCSA	6.9e-69	86.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1	[more]
A0A061EV31_THECC	6.1e-57	71.78	Iron-sulfur cluster biosynthesis family protein isoform 1 OS=Theobroma cacao GN=...	[more]
M5WAY8_PRUPE	8.0e-57	75.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1	[more]
A0A140B491_PRUPE	8.0e-57	75.46	Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3...	[more]
A0A0B0MTF5_GOSAR	2.3e-56	74.21	Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1	[more]

BLAST of CmoCh13G001540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03905.1	7.4e-54	70.06	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	2.0e-11	33.98	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.3	2.0e-11	31.82	Iron-sulphur cluster biosynthesis family protein	[more]

BLAST of CmoCh13G001540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115364\|ref\|XP_008457520.1\|	1.8e-70	86.79	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C...	[more]
gi\|659115367\|ref\|XP_008457521.1\|	1.8e-70	86.79	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C...	[more]
gi\|449470384\|ref\|XP_004152897.1\|	1.0e-68	86.79	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sati...	[more]
gi\|449459108\|ref\|XP_004147288.1\|	8.7e-65	83.65	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C...	[more]
gi\|1009161173\|ref\|XP_015898754.1\|	1.2e-58	76.22	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Ziziphus juj...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000361	FeS_biogenesis
IPR016092	FeS_cluster_insertion

Vocabulary: **Molecular Function**
Term	Definition
GO:0005198	structural molecule activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G001540	CmoCh13G001540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001540.1	CmoCh13G001540.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001540.1.three_prime_UTR.2	CmoCh13G001540.1.three_prime_UTR.2	three_prime_UTR
CmoCh13G001540.1.three_prime_UTR.1	CmoCh13G001540.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001540.1.CDS.4	CmoCh13G001540.1.CDS.4	CDS
CmoCh13G001540.1.CDS.3	CmoCh13G001540.1.CDS.3	CDS
CmoCh13G001540.1.CDS.2	CmoCh13G001540.1.CDS.2	CDS
CmoCh13G001540.1.CDS.1	CmoCh13G001540.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001540.1.five_prime_UTR.2	CmoCh13G001540.1.five_prime_UTR.2	five_prime_UTR
CmoCh13G001540.1.five_prime_UTR.1	CmoCh13G001540.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G001540.1.exon.6	CmoCh13G001540.1.exon.6	exon
CmoCh13G001540.1.exon.5	CmoCh13G001540.1.exon.5	exon
CmoCh13G001540.1.exon.4	CmoCh13G001540.1.exon.4	exon
CmoCh13G001540.1.exon.3	CmoCh13G001540.1.exon.3	exon
CmoCh13G001540.1.exon.2	CmoCh13G001540.1.exon.2	exon
CmoCh13G001540.1.exon.1	CmoCh13G001540.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	GENE3D	G3DSA:2.60.300.12		coord: 52..143 score: 7.1
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 53..152 score: 1.4
IPR000361	FeS cluster biogenesis	unknown	SSF89360	HesB-like domain	coord: 52..145 score: 1.29
IPR016092	FeS cluster insertion protein	TIGRFAMs	TIGR00049	TIGR00049	coord: 53..157 score: 4.3
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 3..158 score: 4.6
None	No IPR available	PANTHER	PTHR10072:SF46	IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL	coord: 3..158 score: 4.6