CmoCh13G001500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACGCCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGGTGAGAGCGGCGGACGGGATCTCTCGCCGGCAAATGTACTTGAGAAGCTACACCTTCTGCAGGGAGGACACCGTCGTCCATGAGAGTACAGCACAGACCTGCCTTGGGAAGCTCAAGTGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACGCCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGGTGAGAGCGGCGGACGGGATCTCTCGCCGGCAAATGTACTTGAGAAGCTACACCTTCTGCAGGGAGGACACCGTCGTCCATGAGAGTACAGCACAGACCTGCCTTGGGAAGCTCAAGTGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA ATGGCCTCCGTCTGCATATCCGAATGCATCAACGACGCCTGTATTATCCCCGCCGGCCGGCCGACGTATTTCAGCTTGCAGCGGTGGCCGGAGGAGGAGGATGGGTCTGTAGAGCCCCGTCGGCCACGGGTGAGAGCGGCGGACGGGATCTCTCGCCGGCAAATGTACTTGAGAAGCTACACCTTCTGCAGGGAGGACACCGTCGTCCATGAGAGTACAGCACAGACCTGCCTTGGGAAGCTCAAGTGGCGACGGAGGCCGGCAGAGATCCGCGGCGGCGGAAGGAGGAGCCGCTGTTTCGCCATCGTGAGGGCCGCCGCTGCGAAGGCTTCTTCCGGCGCCTTGCTCTCCATGTTCCGGCGGTTGCTTTCTTGCGTGGCGAAAGTTGACGGTCGTAAGTGA
BLAST of CmoCh13G001500 vs. TrEMBL
Match: A0A0A0LXY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G497810 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.5e-45 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TrEMBL
Match: M1CZV0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030480 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16 Identity = 60/147 (40.82%), Postives = 81/147 (55.10%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TrEMBL
Match: A0A0A0KET2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.7e-15 Identity = 64/144 (44.44%), Postives = 80/144 (55.56%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TrEMBL
Match: A0A061GYC9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041937 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-14 Identity = 64/145 (44.14%), Postives = 78/145 (53.79%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TrEMBL
Match: M5W229_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020278mg PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.0e-14 Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TAIR10
Match: AT5G02640.1 (AT5G02640.1 unknown protein) HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15 Identity = 61/156 (39.10%), Postives = 75/156 (48.08%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TAIR10
Match: AT3G46300.1 (AT3G46300.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 9.6e-07 Identity = 44/138 (31.88%), Postives = 61/138 (44.20%), Query Frame = 1
BLAST of CmoCh13G001500 vs. TAIR10
Match: AT3G46310.1 (AT3G46310.1 unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 1
BLAST of CmoCh13G001500 vs. NCBI nr
Match: gi|778665185|ref|XP_011648508.1| (PREDICTED: uncharacterized protein LOC105434501 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1
BLAST of CmoCh13G001500 vs. NCBI nr
Match: gi|659115478|ref|XP_008457578.1| (PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45 Identity = 97/133 (72.93%), Postives = 111/133 (83.46%), Query Frame = 1
BLAST of CmoCh13G001500 vs. NCBI nr
Match: gi|697093552|ref|XP_009614493.1| (PREDICTED: uncharacterized protein LOC104107382 [Nicotiana tomentosiformis]) HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15 Identity = 67/162 (41.36%), Postives = 82/162 (50.62%), Query Frame = 1
BLAST of CmoCh13G001500 vs. NCBI nr
Match: gi|449461017|ref|XP_004148240.1| (PREDICTED: uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 5.3e-15 Identity = 64/144 (44.44%), Postives = 80/144 (55.56%), Query Frame = 1
BLAST of CmoCh13G001500 vs. NCBI nr
Match: gi|659127952|ref|XP_008463974.1| (PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 64/145 (44.14%), Postives = 77/145 (53.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|