CmoCh13G000970 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant/T7H20-70 protein
Location	Cmo_Chr13 : 559571 .. 563784 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTGAATGAGGAAATTTCCAAAAGAAAAATTCCCAAATAAGATCTTTGTTAAACTAATTGGAAAGAGGCGGCTTCTCTTTCTTTTCTTTTCCCCAAGGATGATGGCACATGGGTGACAAAGCAGTAGCCATCGCCTTCTTCTTATAAATAGTGAGTTGAGGAGTCAATTTAGACATATCTCATTCTTAGCAGCTTAGCTCATTAGTAGAGATCCTTACAAGCATAGTTTCTTGCTTTCATTTCTTACTCTGCTGATTTCTTTCAATAGGGTGTGGTGGAAAAGGAGAGTAATTTTGTTTGGTAAGAAGGAAAGATTGAGAGAAAATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGTAATGCTCCTCTCTACGTAGAACTTTCTTTCTCCTTTCCAAATTGGTTTAGATTTTGCTGCATAATGTTAAGAGGAGGCTTTTTGAAACTCATGTGGCATTTTATAAAGTTCGTTGCTTAAGGGGTCCCCCTGTTATTTGCCTATTAGCAATGATATATTTTTGTCCTGAATTTCCTACTTCGACTGCTATTGCAAGTTTTGTTGCAGGAATCTCATGTAAAGTTTTAATTGCAAACCTTCAAAGTTATTCCATTTTAATTCTTACGTTTTGATCTTTAAACTTTTTATAAATCTTCATCAATTGTTTTAGTTATATTTAGCAGAAATCTTCGGCAGTCTGTCTCCATTTTTGGTATCAAACTCAAGATACGTGACACGGAATTCGAGTCCGCATTTTTACTCAAATATAATATGAAAATATATCTTTCTTCAGTCTTGGACAATGATTCTTGGCCACTTCCGTCTAAGAGAATCTCATCCTCAGTCTTTACTGAGTCTGATATCAATGGCGTATGCGCTTGAATCAGCATGTCCTTGTACGAATAAATAGTCTTTAGAAAGACGCCTCTCTTTTTCTTGTTTTATTGTTATTGTTTTGAAGAACGGAAAGATTAACTAATTGAGCTTGCGATCACAACCGCCATAGGCTAGGGAGAAAGACAACCAAAGAACGGCTGGGGCCATAAAATGGCATAGGACTAAAATGAACTTTTATTTAAAGGTCAAAAATAAAATAGGACGTTCAAACTAAAGGAGTGCTCATGACGACTAGAATAAGATTATTCCTTCTGTGAGTCATTGTCAAATCATCACGTTTATTTAACTATTATTTTCTAATTTTCAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGTGTGTGAATTGAAGTATCAATCCCGTTAAAATAAAAGGACAGGGATATGCAAATTCACAAACCACAGGGATGGATTGTTTGAAACCTTTTTAAGAATATATGAGTATATCATTTACAGAAGATAAAGAGTATAATTTGTAACTATTTTTAAGAATATAATCCTCAATTTTAGCCGTTCTCAAGAAAAAAGAAATTGAGTTATGCCTAACAAAAACAAGATCTGATCATTTCAAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTGTGAGTATACTTTGTTGATCAATTTGGATCAATGTCAAAGATGTGTGCTCTCTGCTGGAACTTTTACGATTTTATCAGACCAAACGAAAACTGATTGTTCTTCTCATGTTGTTGCGATTTCGTTGATGACCCAGTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGTAATGGACGAAGTTGTTGGAATCTGTTGACTCATCCGTTTTAGTCTCTGATTTCAAATACTTTTTGTAGGTTCTCTTTATTATTAGGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGTATGATGTCATTTTTTCAGCATAAATGTATATTTCGAAGCTTTTTTGTTAGTTACAATAAGTTAGAGTGAATTCGAGAGGCTTATTCGATGTTGCTGCGTTTACTTACATTCGTGGTTGAAGTTTCCTTGGAATATTAGAATCCACAGTCAGTGACATTAGTTGTGTGAAAGTGAAATATCAAACTGAGATTGATTTGACTAAGAATATGGTCGAACAAGAGACTTTTCTTTCTCAGTCAGAAGTTGATTCACAATCACTTTCTTTATATTTAGTAATGATCCTTGTGCTAGAACCATAGAGAATTCTATTGGAACCAACGTTTAACTTCCATCGTCCATGTCTTTTCACACACCTGATACCAAGAAGCTTAGAAGCTGCTTCCTTGTGAACCCACTAATAATATAACCATACAAATAGGAAATTTCAAACATTTAGTCAAATCATCATTTAATCCGTATTTTTTTATTTGTTTGTTTAAATATTATTTTAGTCCCTATATTTTTTTTGCGTTTGTTCATTTTGGTCCTTAAATTTTCAAAATGTTCGAATATTACGTGGGTCCCTGTATTCTCACATTTGGTTTATTTTATAATCTCATATATTAAATAGTTTCCATTGTTTGGTAACTCTATTTTTCCATTAAAACATTGTTTGGTAACTCTGTTGTTTCTTAATCCTAATTGATTTGTGTTAAGAAACTGGGGTATAACAACATTTTTGTCAATTCAAGTAGAACTCAATAGATTAAGCCTCAATTACTATTCTAAAGGTCGATGGTTCGGTTCTCGACTCCCGGAATCGTTAAACTCAAAAAAGTAAAAGTTAGTTCTTTACTTGCTCCCTGTCATAGAGAAGCATGGAATTTTGCTAGTTTCTCCCACTCTCCCAACCGTTTATCTGGCCTTCTTTCCAACCATATATTCTTTAGGGTTTGATTTATAATAGCAGTGGCCAATAGAATCTTTGCTTTCCACTTTCAAGGATGGCTGCAAAGCATTTGAACCATACTTCCATCCTAAGGGAAGTGGAAAGTCCCTGAAATAATCCAACATTTATACGACAGAGAGAGACCAAATCTTCATGCTATTAGGAAAAAAGAATTAAAAAAATGATCCATATCTTTGTTTCTACAATTATATACAGATTTCAGGGAGAATAAAGAAAAAGGAAGATTTTTTATATTTCCTGTTTTTCGATTCTTAAGAACATTACCAAAAAAGCACATTTCCTAGAACTTGTAAAATTAAGAATTCTTAGATGGATTGCTTCTTAAGAATTCATTTTAGGTAAAACTTATCTCTTGTAGTTTGGCCTGTTTACCAGTTTGGTTGATCCGTTTCATTCTTTTAGCTGCTTTGATCGGCACAATTACTATGGTTATTTGATGGAGTTTAGCTGTGTGGGTTGAGAGGGGATAATTTGTATCGAATGCCCAATTTTGGGTTTGGTCGGTTTTACTTGGTTCCCTATCATTTCTTAGATCTTTTAAATGTATTAACAGATTAGAAAAAAGCTTAGATGGCATGATGATTTTGAGTTGTTTGCTTCTTAAGAATTCATTATAAGTAAAACTTTCATCTCTCATGGTGGTTTGACCTATTCATCAGTTTGGTCGATCCGTTCATTCTTTTAGCTGCTTTAATCGACACAACTGCCATAGCCAGCGATGCTAGTTAAAATTCTCTAGTTATGCGATGGAGTTGAGCTGTGTGGGTTGTGGGAGGGGATAATTTGTATCAAATCCCAACTTCGGGTTTGGTCGGTTTGGTCGGGTTTACTTGGTTCCCCTGTCACATACATTTCTATTCATCACATACATTTTTTTTTGGTGCAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAATTTCTTGTTTGTTTTTTCTTTTACTTTGAAAAATGGTGTGAAGTTTTCTGTATTTTCTTTCCTTTAATTCCTGTTTTATTAAAAATGTGCCTTCATTTTCAGTTCAATAATTATAAGACGATAGAATTAAAGACTTTTAGTGTTATTCATCGGACGTTCTTTTAGAATGATAATTAGTTATACACAAACGCCCTCTACCAACGGTTTCGAATTTATGTG

mRNA sequence

AGAAAGTGAATGAGGAAATTTCCAAAAGAAAAATTCCCAAATAAGATCTTTGTTAAACTAATTGGAAAGAGGCGGCTTCTCTTTCTTTTCTTTTCCCCAAGGATGATGGCACATGGGTGACAAAGCAGTAGCCATCGCCTTCTTCTTATAAATAGGTGTGGTGGAAAAGGAGAGTAATTTTGTTTGGTAAGAAGGAAAGATTGAGAGAAAATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTTCTCTTTATTATTAGGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAATTTCTTGTTTGTTTTTTCTTTTACTTTGAAAAATGGTGTGAAGTTTTCTGTATTTTCTTTCCTTTAATTCCTGTTTTATTAAAAATGTGCCTTCATTTTCAGTTCAATAATTATAAGACGATAGAATTAAAGACTTTTAGTGTTATTCATCGGACGTTCTTTTAGAATGATAATTAGTTATACACAAACGCCCTCTACCAACGGTTTCGAATTTATGTG

Coding sequence (CDS)

ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTTCTCTTTATTATTAG

Homology

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BLAST of CmoCh13G000970 vs. TrEMBL
Match: A0A0A0LXG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525300 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 9.8e-56
Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = 1


Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NG+
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGS 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAP--TLKKSGG-EDDPN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAG SP P P  T+KKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQATSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNFQPASRGNWWQGSLYY 137
           GNN QPASRGNWWQGSLYY
Sbjct: 121 GNNSQPASRGNWWQGSLYY 139

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BLAST of CmoCh13G000970 vs. TrEMBL
Match: M5WP09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011283mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-27
Identity = 82/157 (52.23%), Postives = 97/157 (61.78%), Query Frame = 1


Query: 4   KSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSG---DWLKQANGN 63
           K +G  ASS  ADLF VKEPP  SS+ +FA+IFP P +  GRNSSSS     W KQ+ GN
Sbjct: 61  KKQGSAASSLTADLFGVKEPPPKSSTGIFASIFPPPSQVVGRNSSSSELTEYWQKQSLGN 120

Query: 64  QPSHARQG----NSGGS-----------------LEPCHLSSSLYYGGQDGYSQAPSAGL 123
              + +QG    +S G+                  EPC+LSSSLYYGGQ+ YSQ+PS   
Sbjct: 121 HAWNTKQGCPAISSEGARYSLPNKDRSSVLQEERAEPCYLSSSLYYGGQEVYSQSPSTHA 180

Query: 124 SPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
           S S  P  KK GGEDDPNG+N   A+RGNWWQGSLYY
Sbjct: 181 SGS-YPIFKKDGGEDDPNGSNSNSAARGNWWQGSLYY 216

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BLAST of CmoCh13G000970 vs. TrEMBL
Match: B9HPB5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s04320g PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-26
Identity = 76/158 (48.10%), Postives = 92/158 (58.23%), Query Frame = 1


Query: 2   EGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSS---GDWLKQAN 61
           +G      +SSF ADLF   E    SS+ +FA++FP P    GR SS S   G W KQ+ 
Sbjct: 6   QGACFSSSSSSFTADLFGTTESAPVSSAGIFASMFPPPSTVVGRKSSGSEVTGSWQKQSY 65

Query: 62  GNQPSHARQGNSGGS--------------------LEPCHLSSSLYYGGQDGYSQAPSAG 121
           GNQ  + +QG+   S                    +EPCHLSSSLYYGGQ+ YSQ+PS  
Sbjct: 66  GNQAWYPKQGSPANSQAASYSMPDKDRNSVIQEERVEPCHLSSSLYYGGQENYSQSPSTQ 125

Query: 122 LSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
           ++ S  P  KK GGEDDPNG+N   ASRGNWWQGSLYY
Sbjct: 126 MAGS-YPIFKKDGGEDDPNGSNPHSASRGNWWQGSLYY 162

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BLAST of CmoCh13G000970 vs. TrEMBL
Match: A0A0D2UFX5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G095400 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.1e-26
Identity = 74/140 (52.86%), Postives = 86/140 (61.43%), Query Frame = 1


Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSG---DWLKQA 60
           ME K +   +SSF ADLF  K+  S+SS  +F++IFP P   GG+NSS S     W KQ 
Sbjct: 1   METKRQVGSSSSFTADLFGSKDSSSSSSKGIFSSIFPPPSSVGGKNSSGSKVLESWPKQP 60

Query: 61  -NGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDP 120
             G+    A   N    +EPCHLSSSLYYGGQD YS   +   S +  P  KK GGEDD 
Sbjct: 61  LEGSAWRQAPLPNKEERVEPCHLSSSLYYGGQDLYSHPSTCQTSTTSYPVFKKDGGEDDT 120

Query: 121 NGNNFQPASRGNWWQGSLYY 137
           NGNN   ASRGNWWQGSLYY
Sbjct: 121 NGNNSMDASRGNWWQGSLYY 140

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BLAST of CmoCh13G000970 vs. TrEMBL
Match: A0A059D5M4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02296 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25
Identity = 84/159 (52.83%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 1   MEGKSKGYQASSFVADLFDVKE-PPSTSSSEVFAAIFPSPQKGGGRNSSSS--GDWLKQA 60
           ME K +G  +SSF AD+F  KE PPS+SS+ VFA+IFP P    G  SSS   G   K  
Sbjct: 1   MEYKKQGGSSSSFAADIFGAKESPPSSSSTGVFASIFPPPHSVVGTKSSSEVIGYRQKHH 60

Query: 61  NGNQPSHARQGN-------------SGGSL------EPCHLSSSLYYGGQDGYSQAPSAG 120
           N NQ  +++QGN               GS+      EPCHLSSS+YYGG+D YSQ+P A 
Sbjct: 61  NENQGWNSKQGNQVGPERASCNTTSKDGSIFREERGEPCHLSSSIYYGGRDVYSQSPGAQ 120

Query: 121 LSPSPAPTLKKSGGEDDPNG-NNFQPASRGNWWQGSLYY 137
            S S  PTLKK GGEDD NG N+   ASRGNWWQGSLYY
Sbjct: 121 TS-SSHPTLKKDGGEDDQNGTNSVSGASRGNWWQGSLYY 158

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BLAST of CmoCh13G000970 vs. TAIR10
Match: AT5G59080.1 (AT5G59080.1 unknown protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-23
Identity = 67/141 (47.52%), Postives = 87/141 (61.70%), Query Frame = 1


Query: 1   MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLK 60
           MEGK    S    +SSF A+LF  K+P P +SSS +F+ +FP P KG  R+ S+S     
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDGSNSKHG-S 60

Query: 61  QANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDD 120
           QA   +  +A++      +EPCHLSSSLYYGGQD Y+++ +    P P    ++  GEDD
Sbjct: 61  QAQRRESLNAQEDR----VEPCHLSSSLYYGGQDVYARSTTNQTYP-PVKNDRRRSGEDD 120

Query: 121 PNGNNFQPASRGNWWQGSLYY 137
            NG N Q  SRGNWWQGSLYY
Sbjct: 121 ANGQNPQDVSRGNWWQGSLYY 135

[Close]

BLAST of CmoCh13G000970 vs. TAIR10
Match: AT5G02020.1 (AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).)

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-16
Identity = 67/158 (42.41%), Postives = 84/158 (53.16%), Query Frame = 1


Query: 1   MEGKSKGYQASS------FVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNSS----- 60
           MEG+ K   +SS        ++LF  +E PS+ SSS +  +IFP P K  GR S      
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  SSGDWLKQAN---GNQPSHARQGNSGGS-------LEPCHLSSSLYYGGQDGYSQAPSAG 120
           + G W ++ +   GN   +  Q  + GS       ++PCHLSSS+YYGG D Y Q P   
Sbjct: 61  TGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ-PQNS 120

Query: 121 LSPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
            S S   T KK GGEDD        ASRGNWWQGSLYY
Sbjct: 121 TSNS---TNKKDGGEDDSGS-----ASRGNWWQGSLYY 149

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BLAST of CmoCh13G000970 vs. TAIR10
Match: AT3G55646.1 (AT3G55646.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.3e-10
Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 1


Query: 2   EGKSKGYQASSFVADL--FD------VKEPPSTSSSEVFAAIFPSP---QKGGGRNSSSS 61
           + K K   ASS  + L  FD      V    S+S++ +F +IFP P   Q G   + +S 
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPSADQLGRQVDFASQ 64

Query: 62  GDWLKQANGN---QPSHARQGNSGGSLE---PCHLSSSLYYGGQDGYSQAPSAGLSPSPA 121
           G  +K  + N   + S+ ++  S  + E   PCHLSSSLYYGGQ+ YS       + +  
Sbjct: 65  GGHVKYQSPNAKGERSNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSST-----TTTTH 124

Query: 122 PTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
            T KK G E D      + ASRGNWW+GSLYY
Sbjct: 125 DTYKKDGEEGDS-----KRASRGNWWEGSLYY 146

[Close]

BLAST of CmoCh13G000970 vs. TAIR10
Match: AT5G05965.1 (AT5G05965.1 unknown protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 1


Query: 4   KSKGYQASSFVADLFDVKEPPSTSS-SEVFAAIFPSP--QKGGGRNSSSSGDWLKQANGN 63
           K+     SS   +LF  K   S SS S +  +IFP P  +K G   +      + QA   
Sbjct: 7   KAASSSHSSSFDNLFGPKGSASASSCSTILDSIFPPPVARKKGSHTAPEVQGNISQATDE 66

Query: 64  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNN 123
           + SH ++ +S       + SSS+YYGGQ  YS   + G S SP+   K++    D   + 
Sbjct: 67  RSSHEKRESS-------YYSSSIYYGGQQHYSPPRTDGSSTSPSHQPKETNDRTDITTS- 126

Query: 124 FQPASRGNWWQGSLYY 137
               SRGNWW+GSLYY
Sbjct: 127 ---TSRGNWWKGSLYY 131

[Close]

BLAST of CmoCh13G000970 vs. TAIR10
Match: AT3G46880.1 (AT3G46880.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-06
Identity = 43/94 (45.74%), Postives = 49/94 (52.13%), Query Frame = 1


Query: 1  MEGKSK--GYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQAN 60
          MEGK +     +SSF A LF  KEP   SSS  F +IFP P KG  RN  SS       +
Sbjct: 1  MEGKGRVGSSSSSSFTAQLFGPKEP---SSSANFNSIFP-PSKGTARNILSS------KH 60

Query: 61 GNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYS 93
          G+       G        C+LSSSLYYGGQD YS
Sbjct: 61 GSLEQRKEAGT-------CNLSSSLYYGGQDVYS 77

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BLAST of CmoCh13G000970 vs. NCBI nr
Match: gi|659115189|ref|XP_008457432.1| (PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 117/139 (84.17%), Postives = 121/139 (87.05%), Query Frame = 1


Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAP--TLKKSGG-EDDPN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SP P P  T+KKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNFQPASRGNWWQGSLYY 137
           GNN QPASRGNWWQGSLYY
Sbjct: 121 GNNSQPASRGNWWQGSLYY 139

[Close]

BLAST of CmoCh13G000970 vs. NCBI nr
Match: gi|449473730|ref|XP_004153966.1| (PREDICTED: uncharacterized protein LOC101213402 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55
Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = 1


Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NG+
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGS 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAP--TLKKSGG-EDDPN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAG SP P P  T+KKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQATSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNFQPASRGNWWQGSLYY 137
           GNN QPASRGNWWQGSLYY
Sbjct: 121 GNNSQPASRGNWWQGSLYY 139

[Close]

BLAST of CmoCh13G000970 vs. NCBI nr
Match: gi|595836905|ref|XP_007207351.1| (hypothetical protein PRUPE_ppa011283mg [Prunus persica])

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-27
Identity = 82/157 (52.23%), Postives = 97/157 (61.78%), Query Frame = 1


Query: 4   KSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSG---DWLKQANGN 63
           K +G  ASS  ADLF VKEPP  SS+ +FA+IFP P +  GRNSSSS     W KQ+ GN
Sbjct: 61  KKQGSAASSLTADLFGVKEPPPKSSTGIFASIFPPPSQVVGRNSSSSELTEYWQKQSLGN 120

Query: 64  QPSHARQG----NSGGS-----------------LEPCHLSSSLYYGGQDGYSQAPSAGL 123
              + +QG    +S G+                  EPC+LSSSLYYGGQ+ YSQ+PS   
Sbjct: 121 HAWNTKQGCPAISSEGARYSLPNKDRSSVLQEERAEPCYLSSSLYYGGQEVYSQSPSTHA 180

Query: 124 SPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
           S S  P  KK GGEDDPNG+N   A+RGNWWQGSLYY
Sbjct: 181 SGS-YPIFKKDGGEDDPNGSNSNSAARGNWWQGSLYY 216

[Close]

BLAST of CmoCh13G000970 vs. NCBI nr
Match: gi|645216567|ref|XP_008221825.1| (PREDICTED: uncharacterized protein LOC103321768 isoform X1 [Prunus mume])

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-27
Identity = 80/157 (50.96%), Postives = 95/157 (60.51%), Query Frame = 1


Query: 4   KSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSG---DWLKQANGN 63
           K +G  ASS  ADLF VKEPP  SS+ +FA+IFP P +  GRNSSSS     W KQ+ GN
Sbjct: 5   KKQGSAASSLTADLFGVKEPPPKSSTGIFASIFPPPSQVVGRNSSSSELTEYWQKQSLGN 64

Query: 64  QPSHARQGNSGGS---------------------LEPCHLSSSLYYGGQDGYSQAPSAGL 123
              + +QG+   S                      EPC+LSSS+YYGGQ+ YSQ+PS   
Sbjct: 65  HAWNTKQGSPAISSEGARYSLPNKDRSSVLQEERAEPCYLSSSIYYGGQEVYSQSPSTHA 124

Query: 124 SPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
           S S  P  KK GGEDDPNG+N   A+RGNWWQGSLYY
Sbjct: 125 SGS-YPIFKKDGGEDDPNGSNSNSAARGNWWQGSLYY 160

[Close]

BLAST of CmoCh13G000970 vs. NCBI nr
Match: gi|764542693|ref|XP_011459250.1| (PREDICTED: uncharacterized protein LOC101306489 isoform X3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 129.0 bits (323), Expect = 6.2e-27
Identity = 76/157 (48.41%), Postives = 93/157 (59.24%), Query Frame = 1


Query: 4   KSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSG---DWLKQANGN 63
           K +G  +SSF A+LF  K+ P  SS+ +FA+IFP P +  GRNSSSS     W KQ+ GN
Sbjct: 5   KKQGSSSSSFTAELFGFKDSPPKSSTGIFASIFPPPSQVVGRNSSSSELTEYWRKQSLGN 64

Query: 64  QPSHARQGNSGGS---------------------LEPCHLSSSLYYGGQDGYSQAPSAGL 123
           Q  + +QGN   S                      EPCHLSSSLYYGGQ+ YSQ+PS   
Sbjct: 65  QAWNTKQGNQAISSEDARYSLPNKERSSVLQHERAEPCHLSSSLYYGGQEVYSQSPSTPH 124

Query: 124 SPSPAPTLKKSGGEDDPNGNNFQPASRGNWWQGSLYY 137
           +    P  KK  GEDDPNG+N   A+RGNWW+GSLYY
Sbjct: 125 ASGSYPLFKKDAGEDDPNGSNANSAARGNWWEGSLYY 161

The following BLAST results are available for this feature:

BLAST of CmoCh13G000970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG9_CUCSA	9.8e-56	83.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525300 PE=4 SV=1	[more]
M5WP09_PRUPE	1.5e-27	52.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011283mg PE=4 SV=1	[more]
B9HPB5_POPTR	2.1e-26	48.10	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s04320g PE=4 SV=1	[more]
A0A0D2UFX5_GOSRA	8.1e-26	52.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G095400 PE=4 SV=1	[more]
A0A059D5M4_EUCGR	1.1e-25	52.83	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02296 PE=4 SV=1	[more]

BLAST of CmoCh13G000970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59080.1	1.5e-23	47.52	unknown protein	[more]
AT5G02020.1	2.3e-16	42.41	Encodes a protein involved in salt tolerance, names SIS (Salt Induce...	[more]
AT3G55646.1	3.3e-10	38.16	unknown protein	[more]
AT5G05965.1	1.8e-08	35.29	unknown protein	[more]
AT3G46880.1	2.2e-06	45.74	unknown protein	[more]

BLAST of CmoCh13G000970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115189\|ref\|XP_008457432.1\|	1.3e-56	84.17	PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo]	[more]
gi\|449473730\|ref\|XP_004153966.1\|	1.4e-55	83.45	PREDICTED: uncharacterized protein LOC101213402 [Cucumis sativus]	[more]
gi\|595836905\|ref\|XP_007207351.1\|	2.1e-27	52.23	hypothetical protein PRUPE_ppa011283mg [Prunus persica]	[more]
gi\|645216567\|ref\|XP_008221825.1\|	2.8e-27	50.96	PREDICTED: uncharacterized protein LOC103321768 isoform X1 [Prunus mume]	[more]
gi\|764542693\|ref\|XP_011459250.1\|	6.2e-27	48.41	PREDICTED: uncharacterized protein LOC101306489 isoform X3 [Fragaria vesca subsp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000970.1	CmoCh13G000970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33738	FAMILY NOT NAMED	coord: 2..136 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G000970	Cucsa.146600	Cucumber (Gy14) v1	cgycmoB0402
CmoCh13G000970	CmaCh13G001000	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G000970	CmaCh01G006290	Cucurbita maxima (Rimu)	cmacmoB458
CmoCh13G000970	Cla008207	Watermelon (97103) v1	cmowmB173
CmoCh13G000970	Csa1G525300	Cucumber (Chinese Long) v2	cmocuB204
CmoCh13G000970	MELO3C020597	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G000970	ClCG03G001170	Watermelon (Charleston Gray)	cmowcgB184
CmoCh13G000970	CSPI03G31860	Wild cucumber (PI 183967)	cmocpiB214
CmoCh13G000970	CSPI01G23430	Wild cucumber (PI 183967)	cmocpiB206
CmoCh13G000970	Lsi02G013270	Bottle gourd (USVL1VR-Ls)	cmolsiB191
CmoCh13G000970	MELO3C020597.2	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G000970	CsaV3_1G034620	Cucumber (Chinese Long) v3	cmocucB0244
CmoCh13G000970	CsaV3_1G035720	Cucumber (Chinese Long) v3	cmocucB0236
CmoCh13G000970	Cla97C03G052030	Watermelon (97103) v2	cmowmbB209
CmoCh13G000970	Bhi08G000476	Wax gourd	cmowgoB0245
CmoCh13G000970	CsGy1G022910	Cucumber (Gy14) v2	cgybcmoB069
CmoCh13G000970	Carg12396	Silver-seed gourd	carcmoB0594
CmoCh13G000970	Carg20631	Silver-seed gourd	carcmoB0517

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G000970	CmoCh01G006590	Cucurbita moschata (Rifu)	cmocmoB173

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G000970	Melon (DHL92) v3.6.1	cmomedB198
CmoCh13G000970	Silver-seed gourd	carcmoB0212
CmoCh13G000970	Cucumber (Chinese Long) v3	cmocucB0253
CmoCh13G000970	Watermelon (97103) v2	cmowmbB204
CmoCh13G000970	Wax gourd	cmowgoB0238
CmoCh13G000970	Cucurbita moschata (Rifu)	cmocmoB180
CmoCh13G000970	Cucurbita moschata (Rifu)	cmocmoB189
CmoCh13G000970	Cucumber (Gy14) v1	cgycmoB0384
CmoCh13G000970	Cucurbita maxima (Rimu)	cmacmoB577
CmoCh13G000970	Wild cucumber (PI 183967)	cmocpiB217
CmoCh13G000970	Cucumber (Chinese Long) v2	cmocuB214
CmoCh13G000970	Melon (DHL92) v3.5.1	cmomeB178
CmoCh13G000970	Watermelon (Charleston Gray)	cmowcgB180
CmoCh13G000970	Watermelon (97103) v1	cmowmB197
CmoCh13G000970	Cucurbita pepo (Zucchini)	cmocpeB181
CmoCh13G000970	Cucurbita pepo (Zucchini)	cmocpeB202
CmoCh13G000970	Cucurbita pepo (Zucchini)	cmocpeB205
CmoCh13G000970	Cucurbita pepo (Zucchini)	cmocpeB207
CmoCh13G000970	Bottle gourd (USVL1VR-Ls)	cmolsiB186