CmoCh13G000910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	18.5 kDa class I heat shock protein
Location	Cmo_Chr13 : 541183 .. 541665 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

mRNA sequence

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

Homology

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BLAST of CmoCh13G000910 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-58
Identity = 116/162 (71.60%), Postives = 142/162 (87.65%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSS-HFPEIARETSAMVNARVDWK 60
           MS+IP+FFGG+R+++FDPF+  D+ DPF DF FP++LSS  FPE +RE SA V+ RVDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPFS-LDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED KV+QISGER VEKE+KN+ WHR+ERSSG F RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           FRLPE+AK+E+++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

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BLAST of CmoCh13G000910 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-55
Identity = 112/161 (69.57%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPS FGG+RS++FDPF+  D+ DPF DFHFP+SLS+       E SA VN RVDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFS-LDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV +AD+PGLKKEEVKV+IED +V+QISGER +EKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+E+++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

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BLAST of CmoCh13G000910 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.2e-55
Identity = 113/162 (69.75%), Postives = 140/162 (86.42%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSS-LSSHFPEIARETSAMVNARVDWK 60
           MS+IPSFFGG+RS++FDPF+  D+ DPF DF F +S LS+ FP   RE SA V+ RVDWK
Sbjct: 1   MSLIPSFFGGRRSNVFDPFS-LDVWDPFKDFPFNNSALSASFP---RENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRR 120
           ETPEAHV KADLPG+KKEEVKVEIED +V+QISGER VEKE+KN++WHR+ERSSG F RR
Sbjct: 61  ETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           FRLPE+AKM++++A+MENGVLTVTVPK E +K +VK+++ISG
Sbjct: 121 FRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

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BLAST of CmoCh13G000910 vs. Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54
Identity = 112/161 (69.57%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPSFFGG+RSS+FDPF+  D+ DPF DF FPSSLS+       E SA V+ RVDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPFS-LDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KAD+PGLKKEEVK+EI+DG+V+QISGER VEKE+KN+ WHR+ERSSG   RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+++++ASMENGVLTVTVPK E +K DVK+++ISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

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BLAST of CmoCh13G000910 vs. Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IP FFGG+RS++FDPF+  D+ DPF DFH P+S       ++ E SA V+ RVDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPFS-LDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KAD+PGLKKEEVKV+IED +V+QISGER VEKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+ E++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

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BLAST of CmoCh13G000910 vs. TrEMBL
Match: H6TB43_CITLA (HSP18.2A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.1e-77
Identity = 147/160 (91.88%), Postives = 157/160 (98.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSAMVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER +EKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPEDAKMEEIRASMENGVLTVTVPKAE++K DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

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BLAST of CmoCh13G000910 vs. TrEMBL
Match: A0A0A0LV15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.9e-74
Identity = 143/160 (89.38%), Postives = 155/160 (96.88%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER VEKE+K+EKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEI+ASMENGVLTVTVPKAEE+K DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

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BLAST of CmoCh13G000910 vs. TrEMBL
Match: A0A0A0M0N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.7e-71
Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G+R S+FDPFATFDLSDPFDFHFPSS+SSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ +K DVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

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BLAST of CmoCh13G000910 vs. TrEMBL
Match: A0A059AFU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01985 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSL--SSHFPEIARETSAMVNARVDW 60
           MS+IPS+FGG+RSS+ DPF+  DL DPF DFHFPSS    S+FP+  RE +A VN R+DW
Sbjct: 1   MSLIPSWFGGRRSSVLDPFS-LDLWDPFKDFHFPSSSLSDSNFPQALRENTAFVNTRIDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KETPEAHV KADLPGLKKEEVKVEIED +V+QISGER VEKE+KN+ WHR+ERSSG F R
Sbjct: 61  KETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFMR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RFRLPE+AKM++++ASMENGVLT+TVPKAEE+K +VK++E+SG
Sbjct: 121 RFRLPENAKMDQVKASMENGVLTITVPKAEEKKPEVKAIEVSG 162

[Close]

BLAST of CmoCh13G000910 vs. TrEMBL
Match: A0A059AFT3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01975 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-56
Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSL--SSHFPEIARETSAMVNARVDW 60
           MS+IPS+FGG+RS++FDPF+  DL DPF DF FPSS   +S+FP+  RE +A VN R+DW
Sbjct: 1   MSLIPSWFGGRRSNVFDPFS-LDLWDPFKDFPFPSSSLSASNFPQTFRENTAFVNTRIDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KETPEAHV KADLPGLKKEEVKVEIED +V+QISGER VEKE+KN+ WHR+ERSSG F R
Sbjct: 61  KETPEAHVFKADLPGLKKEEVKVEIEDDRVVQISGERNVEKEDKNDTWHRVERSSGKFMR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RFRLPE+AKM++++ASMENGVLTVTVPK EE+K +VK++EISG
Sbjct: 121 RFRLPENAKMDQVKASMENGVLTVTVPKVEEKKPEVKAIEISG 162

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BLAST of CmoCh13G000910 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 211.5 bits (537), Expect = 3.9e-55
Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MS+IPS FGG+RS++FDPF+  DL DPF+  F  S +      AR+ +A  NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  V+QISGER  E EEKN+KWHR+ER+SG F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPE+AKMEE++A+MENGVLTV VPKA E+K  VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh13G000910 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-53
Identity = 107/161 (66.46%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFD-FHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPS FGG+R+++FDPF+  D+ DPF+ F  PS L++     A + +A  NA+VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPFS-LDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KADLPGL+KEEVKVE+EDG ++QISGER  E EEKN+KWHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AKMEEI+ASMENGVL+VTVPK  E+K +VKS++ISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh13G000910 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-53
Identity = 111/161 (68.94%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MSMIPSFFGG-QRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MSMIPSFF   +RS+IFDPF+  D+ DPF     SSLS       RE SA+VNARVDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFS-LDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KADLPGLKKEEVKVEIE+  V++ISGER VEKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+ KM++++A+MENGVLTVTVPKAE +K DVKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh13G000910 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 201.1 bits (510), Expect = 5.3e-52
Identity = 101/160 (63.12%), Postives = 132/160 (82.50%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MS++PSFFGG+R+++FDPF+  D+ DPF+      L++     A++ +A  NA+VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPFS-LDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG ++QISGER  E EEK++ WHR+ERSSG F RRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPE+AK+EE++ASMENGVL+VTVPK +E K +VKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh13G000910 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-51
Identity = 110/165 (66.67%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MSMIPSFFGGQR--SSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDW 60
           MS+IPSFFG  R  +SIFDPF+  D+ DPF +  FPSSLS        ETSA+ NARVDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFS-LDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  V++ISGER VEKEEK + WHR+ERSSG F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEE--RKMDVKSVEISG 161
           +F+LPE+ KM++++ASMENGVLTVTVPK EE  +K  VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmoCh13G000910 vs. NCBI nr
Match: gi|315932720|gb|ADU55790.1| (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 147/160 (91.88%), Postives = 157/160 (98.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSAMVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER +EKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPEDAKMEEIRASMENGVLTVTVPKAE++K DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of CmoCh13G000910 vs. NCBI nr
Match: gi|659115167|ref|XP_008457420.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.2e-76
Identity = 148/160 (92.50%), Postives = 156/160 (97.50%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGER VEKE+KNEKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEIRASMENGVLTVTVPKAEE+K DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

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BLAST of CmoCh13G000910 vs. NCBI nr
Match: gi|449472906|ref|XP_004153730.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-74
Identity = 143/160 (89.38%), Postives = 155/160 (96.88%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER VEKE+K+EKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEI+ASMENGVLTVTVPKAEE+K DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

[Close]

BLAST of CmoCh13G000910 vs. NCBI nr
Match: gi|659115165|ref|XP_008457419.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-74
Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G++SS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PEDAK EEIRASMENGVLTVTVPKAE +K DVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CmoCh13G000910 vs. NCBI nr
Match: gi|449455054|ref|XP_004145268.1| (PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 8.2e-71
Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G+R S+FDPFATFDLSDPFDFHFPSS+SSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ +K DVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

The following BLAST results are available for this feature:

BLAST of CmoCh13G000910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP16_SOYBN	2.7e-58	71.60	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]
HSP13_SOYBN	2.2e-55	69.57	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1	[more]
HSP12_MEDSA	8.2e-55	69.75	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP11_SOYBN	1.1e-54	69.57	17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1	[more]
HSP14_SOYBN	2.4e-54	68.32	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1	[more]

BLAST of CmoCh13G000910 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB43_CITLA	9.1e-77	91.88	HSP18.2A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0LV15_CUCSA	1.9e-74	89.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1	[more]
A0A0A0M0N2_CUCSA	5.7e-71	86.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1	[more]
A0A059AFU2_EUCGR	1.2e-57	71.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01985 PE=3 SV=1	[more]
A0A059AFT3_EUCGR	1.0e-56	71.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01975 PE=3 SV=1	[more]

BLAST of CmoCh13G000910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	3.9e-55	68.13	heat shock protein 18.2	[more]
AT1G53540.1	2.2e-53	66.46	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	6.3e-53	68.94	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.3e-52	63.13	heat shock protein 17.4	[more]
AT1G07400.1	3.4e-51	66.67	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh13G000910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932720\|gb\|ADU55790.1\|	1.3e-76	91.88	HSP18.2A [Citrullus lanatus]	[more]
gi\|659115167\|ref\|XP_008457420.1\|	2.2e-76	92.50	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|449472906\|ref\|XP_004153730.1\|	2.7e-74	89.38	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659115165\|ref\|XP_008457419.1\|	2.7e-74	90.63	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|449455054\|ref\|XP_004145268.1\|	8.2e-71	86.25	PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000910.1	CmoCh13G000910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..159 score: 3.7
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 56..145 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 14..159 score: 2.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 26..160 score: 1.38
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..160 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G000910	Cucsa.146690	Cucumber (Gy14) v1	cgycmoB0402
CmoCh13G000910	CmaCh13G000950	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G000910	CmaCh01G006350	Cucurbita maxima (Rimu)	cmacmoB458
CmoCh13G000910	Cla008197	Watermelon (97103) v1	cmowmB173
CmoCh13G000910	Csa1G527860	Cucumber (Chinese Long) v2	cmocuB204
CmoCh13G000910	MELO3C020587	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G000910	ClCG03G001100	Watermelon (Charleston Gray)	cmowcgB184
CmoCh13G000910	CSPI03G31790	Wild cucumber (PI 183967)	cmocpiB214
CmoCh13G000910	CSPI01G23520	Wild cucumber (PI 183967)	cmocpiB206
CmoCh13G000910	Lsi02G013180	Bottle gourd (USVL1VR-Ls)	cmolsiB191
CmoCh13G000910	Cp4.1LG20g08260	Cucurbita pepo (Zucchini)	cmocpeB202
CmoCh13G000910	Cp4.1LG02g11550	Cucurbita pepo (Zucchini)	cmocpeB207
CmoCh13G000910	MELO3C035274.2	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G000910	CsaV3_1G035820	Cucumber (Chinese Long) v3	cmocucB0236
CmoCh13G000910	Cla97C03G051930	Watermelon (97103) v2	cmowmbB209
CmoCh13G000910	Bhi08G000468	Wax gourd	cmowgoB0245
CmoCh13G000910	CsGy1G023000	Cucumber (Gy14) v2	cgybcmoB069
CmoCh13G000910	Carg12404	Silver-seed gourd	carcmoB0594
CmoCh13G000910	Carg01075	Silver-seed gourd	carcmoB0212

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G000910	CmoCh01G006670	Cucurbita moschata (Rifu)	cmocmoB173
CmoCh13G000910	CmoCh06G002650	Cucurbita moschata (Rifu)	cmocmoB189

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G000910	Cucumber (Chinese Long) v3	cmocucB0253
CmoCh13G000910	Watermelon (97103) v2	cmowmbB204
CmoCh13G000910	Wax gourd	cmowgoB0238
CmoCh13G000910	Cucurbita moschata (Rifu)	cmocmoB180
CmoCh13G000910	Cucumber (Gy14) v1	cgycmoB0384
CmoCh13G000910	Cucurbita maxima (Rimu)	cmacmoB577
CmoCh13G000910	Wild cucumber (PI 183967)	cmocpiB217
CmoCh13G000910	Cucumber (Chinese Long) v2	cmocuB214
CmoCh13G000910	Melon (DHL92) v3.5.1	cmomeB178
CmoCh13G000910	Watermelon (Charleston Gray)	cmowcgB180
CmoCh13G000910	Watermelon (97103) v1	cmowmB197
CmoCh13G000910	Bottle gourd (USVL1VR-Ls)	cmolsiB186
CmoCh13G000910	Melon (DHL92) v3.6.1	cmomedB198
CmoCh13G000910	Silver-seed gourd	carcmoB0517