CmoCh13G000910.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000910.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	18.5 kDa class I heat shock protein
Location	Cmo_Chr13 : 541183 .. 541665 (-)
Sequence length	483

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

mRNA sequence

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCAACGGAGCAGCATCTTCGATCCATTTGCCACATTCGATCTCTCAGATCCATTCGATTTTCACTTTCCTTCATCACTTTCATCTCACTTTCCGGAAATTGCTCGTGAAACTTCAGCTATGGTGAACGCTCGTGTAGACTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAAAAAGAGGAAGTGAAAGTGGAGATAGAAGACGGAAAAGTGATTCAGATCAGCGGCGAAAGGAGAGTAGAGAAAGAAGAGAAAAACGAGAAATGGCACCGGATGGAGCGAAGCAGTGGAATGTTCCAGAGGAGATTCCGGCTGCCGGAAGATGCGAAAATGGAGGAAATTAGGGCATCTATGGAGAACGGAGTACTGACTGTGACAGTGCCGAAGGCGGAAGAAAGGAAAATGGATGTGAAGTCCGTTGAGATTTCCGGCTGA

Homology

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BLAST of CmoCh13G000910.1 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-58
Identity = 116/162 (71.60%), Postives = 142/162 (87.65%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSS-HFPEIARETSAMVNARVDWK 60
           MS+IP+FFGG+R+++FDPF+  D+ DPF DF FP++LSS  FPE +RE SA V+ RVDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPFS-LDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED KV+QISGER VEKE+KN+ WHR+ERSSG F RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           FRLPE+AK+E+++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

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BLAST of CmoCh13G000910.1 vs. Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-55
Identity = 112/161 (69.57%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPS FGG+RS++FDPF+  D+ DPF DFHFP+SLS+       E SA VN RVDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFS-LDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV +AD+PGLKKEEVKV+IED +V+QISGER +EKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+E+++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

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BLAST of CmoCh13G000910.1 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.2e-55
Identity = 113/162 (69.75%), Postives = 140/162 (86.42%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSS-LSSHFPEIARETSAMVNARVDWK 60
           MS+IPSFFGG+RS++FDPF+  D+ DPF DF F +S LS+ FP   RE SA V+ RVDWK
Sbjct: 1   MSLIPSFFGGRRSNVFDPFS-LDVWDPFKDFPFNNSALSASFP---RENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRR 120
           ETPEAHV KADLPG+KKEEVKVEIED +V+QISGER VEKE+KN++WHR+ERSSG F RR
Sbjct: 61  ETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           FRLPE+AKM++++A+MENGVLTVTVPK E +K +VK+++ISG
Sbjct: 121 FRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

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BLAST of CmoCh13G000910.1 vs. Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-54
Identity = 112/161 (69.57%), Postives = 137/161 (85.09%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPSFFGG+RSS+FDPF+  D+ DPF DF FPSSLS+       E SA V+ RVDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPFS-LDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KAD+PGLKKEEVK+EI+DG+V+QISGER VEKE+KN+ WHR+ERSSG   RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+++++ASMENGVLTVTVPK E +K DVK+++ISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of CmoCh13G000910.1 vs. Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 110/161 (68.32%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IP FFGG+RS++FDPF+  D+ DPF DFH P+S       ++ E SA V+ RVDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPFS-LDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KAD+PGLKKEEVKV+IED +V+QISGER VEKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AK+ E++ASMENGVLTVTVPK E +K DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

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BLAST of CmoCh13G000910.1 vs. TrEMBL
Match: H6TB43_CITLA (HSP18.2A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.1e-77
Identity = 147/160 (91.88%), Postives = 157/160 (98.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSAMVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER +EKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPEDAKMEEIRASMENGVLTVTVPKAE++K DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

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BLAST of CmoCh13G000910.1 vs. TrEMBL
Match: A0A0A0LV15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.9e-74
Identity = 143/160 (89.38%), Postives = 155/160 (96.88%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER VEKE+K+EKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEI+ASMENGVLTVTVPKAEE+K DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. TrEMBL
Match: A0A0A0M0N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 5.7e-71
Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G+R S+FDPFATFDLSDPFDFHFPSS+SSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ +K DVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. TrEMBL
Match: A0A059AFU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01985 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSL--SSHFPEIARETSAMVNARVDW 60
           MS+IPS+FGG+RSS+ DPF+  DL DPF DFHFPSS    S+FP+  RE +A VN R+DW
Sbjct: 1   MSLIPSWFGGRRSSVLDPFS-LDLWDPFKDFHFPSSSLSDSNFPQALRENTAFVNTRIDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KETPEAHV KADLPGLKKEEVKVEIED +V+QISGER VEKE+KN+ WHR+ERSSG F R
Sbjct: 61  KETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFMR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RFRLPE+AKM++++ASMENGVLT+TVPKAEE+K +VK++E+SG
Sbjct: 121 RFRLPENAKMDQVKASMENGVLTITVPKAEEKKPEVKAIEVSG 162

[Close]

BLAST of CmoCh13G000910.1 vs. TrEMBL
Match: A0A059AFT3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01975 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-56
Identity = 117/163 (71.78%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPF-DFHFPSSL--SSHFPEIARETSAMVNARVDW 60
           MS+IPS+FGG+RS++FDPF+  DL DPF DF FPSS   +S+FP+  RE +A VN R+DW
Sbjct: 1   MSLIPSWFGGRRSNVFDPFS-LDLWDPFKDFPFPSSSLSASNFPQTFRENTAFVNTRIDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KETPEAHV KADLPGLKKEEVKVEIED +V+QISGER VEKE+KN+ WHR+ERSSG F R
Sbjct: 61  KETPEAHVFKADLPGLKKEEVKVEIEDDRVVQISGERNVEKEDKNDTWHRVERSSGKFMR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RFRLPE+AKM++++ASMENGVLTVTVPK EE+K +VK++EISG
Sbjct: 121 RFRLPENAKMDQVKASMENGVLTVTVPKVEEKKPEVKAIEISG 162

[Close]

BLAST of CmoCh13G000910.1 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 211.5 bits (537), Expect = 3.9e-55
Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MS+IPS FGG+RS++FDPF+  DL DPF+  F  S +      AR+ +A  NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  V+QISGER  E EEKN+KWHR+ER+SG F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPE+AKMEE++A+MENGVLTV VPKA E+K  VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh13G000910.1 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-53
Identity = 107/161 (66.46%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFD-FHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MS+IPS FGG+R+++FDPF+  D+ DPF+ F  PS L++     A + +A  NA+VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPFS-LDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KADLPGL+KEEVKVE+EDG ++QISGER  E EEKN+KWHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+AKMEEI+ASMENGVL+VTVPK  E+K +VKS++ISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh13G000910.1 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 6.3e-53
Identity = 111/161 (68.94%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MSMIPSFFGG-QRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKE 60
           MSMIPSFF   +RS+IFDPF+  D+ DPF     SSLS       RE SA+VNARVDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFS-LDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRF 120
           TPEAHV KADLPGLKKEEVKVEIE+  V++ISGER VEKE+KN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RLPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           RLPE+ KM++++A+MENGVLTVTVPKAE +K DVKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh13G000910.1 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 201.1 bits (510), Expect = 5.3e-52
Identity = 101/160 (63.12%), Postives = 132/160 (82.50%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MS++PSFFGG+R+++FDPF+  D+ DPF+      L++     A++ +A  NA+VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPFS-LDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG ++QISGER  E EEK++ WHR+ERSSG F RRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPE+AK+EE++ASMENGVL+VTVPK +E K +VKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh13G000910.1 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-51
Identity = 110/165 (66.67%), Postives = 131/165 (79.39%), Query Frame = 1


Query: 1   MSMIPSFFGGQR--SSIFDPFATFDLSDPF-DFHFPSSLSSHFPEIARETSAMVNARVDW 60
           MS+IPSFFG  R  +SIFDPF+  D+ DPF +  FPSSLS        ETSA+ NARVDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFS-LDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  V++ISGER VEKEEK + WHR+ERSSG F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRLPEDAKMEEIRASMENGVLTVTVPKAEE--RKMDVKSVEISG 161
           +F+LPE+ KM++++ASMENGVLTVTVPK EE  +K  VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmoCh13G000910.1 vs. NCBI nr
Match: gi|315932720|gb|ADU55790.1| (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 147/160 (91.88%), Postives = 157/160 (98.12%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSAMVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER +EKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           LPEDAKMEEIRASMENGVLTVTVPKAE++K DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. NCBI nr
Match: gi|659115167|ref|XP_008457420.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.2e-76
Identity = 148/160 (92.50%), Postives = 156/160 (97.50%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGER VEKE+KNEKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEIRASMENGVLTVTVPKAEE+K DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. NCBI nr
Match: gi|449472906|ref|XP_004153730.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-74
Identity = 143/160 (89.38%), Postives = 155/160 (96.88%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFFGG+RSS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDW ET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWMET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQISGER VEKE+K+EKWHRMERSSG F+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERNVEKEDKSEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED KMEEI+ASMENGVLTVTVPKAEE+K DVKSV+ISG
Sbjct: 121 MPEDVKMEEIKASMENGVLTVTVPKAEEKKADVKSVKISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. NCBI nr
Match: gi|659115165|ref|XP_008457419.1| (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 2.7e-74
Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G++SS+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PEDAK EEIRASMENGVLTVTVPKAE +K DVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CmoCh13G000910.1 vs. NCBI nr
Match: gi|449455054|ref|XP_004145268.1| (PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 8.2e-71
Identity = 138/160 (86.25%), Postives = 150/160 (93.75%), Query Frame = 1


Query: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60
           MSMIPSFF G+R S+FDPFATFDLSDPFDFHFPSS+SSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ +K DVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

The following BLAST results are available for this feature:

BLAST of CmoCh13G000910.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP16_SOYBN	2.7e-58	71.60	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]
HSP13_SOYBN	2.2e-55	69.57	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1	[more]
HSP12_MEDSA	8.2e-55	69.75	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP11_SOYBN	1.1e-54	69.57	17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1	[more]
HSP14_SOYBN	2.4e-54	68.32	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1	[more]

BLAST of CmoCh13G000910.1 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB43_CITLA	9.1e-77	91.88	HSP18.2A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0LV15_CUCSA	1.9e-74	89.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527870 PE=3 SV=1	[more]
A0A0A0M0N2_CUCSA	5.7e-71	86.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527875 PE=3 SV=1	[more]
A0A059AFU2_EUCGR	1.2e-57	71.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01985 PE=3 SV=1	[more]
A0A059AFT3_EUCGR	1.0e-56	71.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01975 PE=3 SV=1	[more]

BLAST of CmoCh13G000910.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	3.9e-55	68.13	heat shock protein 18.2	[more]
AT1G53540.1	2.2e-53	66.46	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	6.3e-53	68.94	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.3e-52	63.13	heat shock protein 17.4	[more]
AT1G07400.1	3.4e-51	66.67	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh13G000910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932720\|gb\|ADU55790.1\|	1.3e-76	91.88	HSP18.2A [Citrullus lanatus]	[more]
gi\|659115167\|ref\|XP_008457420.1\|	2.2e-76	92.50	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|449472906\|ref\|XP_004153730.1\|	2.7e-74	89.38	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659115165\|ref\|XP_008457419.1\|	2.7e-74	90.63	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|449455054\|ref\|XP_004145268.1\|	8.2e-71	86.25	PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G000910	CmoCh13G000910	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000910.1	CmoCh13G000910.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000910.1.CDS.1	CmoCh13G000910.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000910.1.exon.1	CmoCh13G000910.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..159 score: 3.7
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 56..145 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 14..159 score: 2.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 26..160 score: 1.38
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..160 score: 1.9