CmoCh12G011790 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	PLATZ transcription factor family protein
Location	Cmo_Chr12 : 10666678 .. 10667573 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTCATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGGTTAGTATCTTGGAAAGATTTTGAATTCTTGAATTCTGATGGTTTTGTGTTCGTGTTCTTAGTCTATGGTTTTGTTTTTGTTCTTAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTATTCTTTTCTAAAACTTGAAATTTGATCCGTTCTTACATTAATATCAAAAGGATTTGAATTTTGAACCATATGATCATCAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTACTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAATAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

mRNA sequence

GGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTCATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTACTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAATAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

Coding sequence (CDS)

GGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTCATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGCTCCCTTGGATGCAAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTACTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAATAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

Homology

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BLAST of CmoCh12G011790 vs. TrEMBL
Match: A0A0A0LI85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009420 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 8.2e-122
Identity = 214/243 (88.07%), Postives = 230/243 (94.65%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 181 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSK-ISNEDMTTSISINRRKGIPHRS 240
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ K IS+ED+ TS+SI+RRKGIPHRS
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSISRRKGIPHRS 241

Query: 241 PLC 242
           PLC
Sbjct: 242 PLC 243

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BLAST of CmoCh12G011790 vs. TrEMBL
Match: B9SZN4_RICCO (Zinc ion binding protein, putative OS=Ricinus communis GN=RCOM_1372310 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-114
Identity = 201/244 (82.38%), Postives = 222/244 (90.98%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWL+ALYTQKFFVGCS+HETAKKNEKN+CCLDCC+SICPHC+ SHRFHRLLQVRR
Sbjct: 28  GIQKPAWLDALYTQKFFVGCSYHETAKKNEKNVCCLDCCVSICPHCVPSHRFHRLLQVRR 87

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDL+KLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQEP
Sbjct: 88  YVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 147

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           + HCSLGCKVDFVLKH ++LS YL+ CNSL LS DFL+ QDMGDDEMTNETPHSTIVD +
Sbjct: 148 FFHCSLGCKVDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGDDEMTNETPHSTIVDSE 207

Query: 181 EPM--SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHR 240
           +PM  SS SSGSE MS+  T I+RKKR+G+Y+CGRS SK+S+EDM TS+S  RRKGIPHR
Sbjct: 208 DPMSWSSGSSGSENMSMVCTEIVRKKRSGLYVCGRSVSKVSDEDMATSMS--RRKGIPHR 267

Query: 241 SPLC 242
           SPLC
Sbjct: 268 SPLC 269

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BLAST of CmoCh12G011790 vs. TrEMBL
Match: A0A067K5B9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16980 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.5e-112
Identity = 199/243 (81.89%), Postives = 219/243 (90.12%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALYTQKFFVGCS+HE+AKKNEKN+CCLDCCISICPHC+ SHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYTQKFFVGCSYHESAKKNEKNVCCLDCCISICPHCVPSHRFHRLLQVRR 61

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 121

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           +IHCSLGCKVDFVLKH ++LS YL+ CNSL LS DFL+ QDMG+DE+TNETPHSTIVD D
Sbjct: 122 FIHCSLGCKVDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGEDEVTNETPHSTIVDSD 181

Query: 181 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTS-KISNEDMTTSISINRRKGIPHRS 240
           EPMS SS  SE  S+  T I+RKKR+G+Y+C RS + K+S+EDM TS+S  RRKGIPHRS
Sbjct: 182 EPMSWSSGSSENTSMVCTEIVRKKRSGLYVCARSANYKVSDEDMATSMS--RRKGIPHRS 241

Query: 241 PLC 242
           PLC
Sbjct: 242 PLC 242

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BLAST of CmoCh12G011790 vs. TrEMBL
Match: A0A061GPE1_THECC (PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_038233 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 7.7e-112
Identity = 200/246 (81.30%), Postives = 223/246 (90.65%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALY+QKFFVGCS+HETAKKNEKN+ CLDCCISICPHCI SHRFHRLLQVRR
Sbjct: 5   GIQKPAWLEALYSQKFFVGCSYHETAKKNEKNVYCLDCCISICPHCIPSHRFHRLLQVRR 64

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKG+GNYCTSC RSLQEP
Sbjct: 65  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 124

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           +IHCSLGCKVDFVLKH ++LS++L+ CN+L LS DFL+ QD G+DEMTNETPHSTIVD D
Sbjct: 125 FIHCSLGCKVDFVLKHYKDLSAFLRKCNTLTLSPDFLIPQDTGEDEMTNETPHSTIVDSD 184

Query: 181 EPM--SSSSSGSETMSIPHT--PIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIP 240
           EPM  SS SSGSE MS+ ++   I+RKKR+G+YLCGRS +K+S+EDM TS+S  RRKGIP
Sbjct: 185 EPMSWSSGSSGSENMSMAYSSDQIVRKKRSGLYLCGRSANKVSDEDMATSMS--RRKGIP 244

Query: 241 HRSPLC 242
           HRSPLC
Sbjct: 245 HRSPLC 248

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BLAST of CmoCh12G011790 vs. TrEMBL
Match: D7T4Z5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00600 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-111
Identity = 200/244 (81.97%), Postives = 217/244 (88.93%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALYTQKFFV CS HETAKKNEKNI CLDCC SICPHC+  HRFHRL+QVRR
Sbjct: 4   GIQKPAWLEALYTQKFFVSCSIHETAKKNEKNILCLDCCTSICPHCLQFHRFHRLVQVRR 63

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDL+KLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQEP
Sbjct: 64  YVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 123

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           YIHCSLGCKVDF+LKH ++LS YL+ C+SL LS DFLV  DMG+DEMTNETPHSTIVD D
Sbjct: 124 YIHCSLGCKVDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTIVDCD 183

Query: 181 EPMSSS--SSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHR 240
           EPMSSS  SSGSE MS+  T I+RKKR+G+Y+CGRS SK+S EDM TS+S  RRKGIPHR
Sbjct: 184 EPMSSSSGSSGSENMSMMCTEIVRKKRSGLYVCGRSASKVSEEDMATSMS--RRKGIPHR 243

Query: 241 SPLC 242
           SP+C
Sbjct: 244 SPMC 245

[Close]

BLAST of CmoCh12G011790 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein)

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-96
Identity = 171/255 (67.06%), Postives = 203/255 (79.61%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWL+ALY +KFFVGC +HETAKKNE+N+CCLDCC S+CPHC+ SHRFHRLLQVRR
Sbjct: 2   GIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRR 61

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKG+GNYCTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 121

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QD-MGDDEM-TNETPHSTIVD 180
           YIHCSLGCKVDFV+K  R+++ +LKPC++L L  D+++ QD + DDE+   ETP ST+VD
Sbjct: 122 YIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 181

Query: 181 YDEPMSSSSSGSE--------TMSIPHTPIIRKKRTGVYLCGRSTS---KISNEDMTTSI 240
            DE MS SS+ S+          +   T ++RKKRTG  LC +S +   ++S +    S 
Sbjct: 182 GDESMSWSSASSDNNNAGAAAAYAATTTHVVRKKRTGFCLCAKSANSYKEVSEDPDDISA 241

Query: 241 SINRRKGIPHRSPLC 242
            INRRKG+P RSPLC
Sbjct: 242 CINRRKGVPQRSPLC 256

[Close]

BLAST of CmoCh12G011790 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein)

HSP 1 Score: 234.6 bits (597), Expect = 6.5e-62
Identity = 124/248 (50.00%), Postives = 158/248 (63.71%), Query Frame = 1


Query: 5   PAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVYH 64
           PAWLE L   KFF  C  HE  KKNEKNI C+DCC++ICPHC+SSH  HRLLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 65  DVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIHC 124
           DV+R+ED  KL+DCS +QPYT NS+KVVFI +RPQ+RQF+GSGN C +C RSLQ PY+ C
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYLFC 126

Query: 125 SLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDY-DEPMS 184
            L CK+  V+  +R LS +L+ CN L L+          DE+T  TP ST+        S
Sbjct: 127 CLSCKISDVIMRQRGLSGFLRVCNVLDLT----------DEVTTTTPSSTLEPTGSNRTS 186

Query: 185 SSSSGSETMSI---------PHTPIIRKKRTGV-YLCGRSTSKISNEDMTTSIS-INRRK 241
           S SSG+E   +           T I+RKKR+ +   C R T  +S  +    ++ +NRRK
Sbjct: 187 SESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRRK 244

[Close]

BLAST of CmoCh12G011790 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein)

HSP 1 Score: 202.6 bits (514), Expect = 2.7e-52
Identity = 114/240 (47.50%), Postives = 142/240 (59.17%), Query Frame = 1


Query: 4   KPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 63
           KPAWLE L  + FF  C  HET +K+EKN+ CL CC+S+CPHC+ SHR H LLQVRRYVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 64  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 123
           HDVVRL DL+KLIDCS VQPYTIN AKV+F+ +R Q+R  K S N C +C R LQEP+  
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRA-KVSSNVCFTCDRILQEPFHF 137

Query: 124 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEM----TNETPHSTIVDYD 183
           CSL CKVD++     +LSS L   +    + + L  D G D++    T E     +V  D
Sbjct: 138 CSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMD-GHDQLGEISTMEDGEDILVISD 197

Query: 184 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHRSP 240
           E    S  G+ +         +KK    YL G   S +           NRRKG PHR+P
Sbjct: 198 E----SEQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLG----------NRRKGAPHRAP 241

[Close]

BLAST of CmoCh12G011790 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 137.9 bits (346), Expect = 8.3e-33
Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 1


Query: 5   PAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCIS-ICPHCISSHRFHRLLQVRRYVY 64
           P WL+ L  +KFFV C  H  + K+E N+ CLDC    +C  C+S H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 65  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 124
           HDV+R+ ++QK +D + VQ Y INSAKVVF+ +RPQ R  KG  N C  C RSL + +  
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFRF 131

Query: 125 CSLGCKVDFVLKHKR-----NLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVD 178
           CSLGCK+  + K KR     NLS      +S  +       D+ ++  T  TP  + V+
Sbjct: 132 CSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPSTPPLSAVN 190

[Close]

BLAST of CmoCh12G011790 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein)

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-32
Identity = 85/250 (34.00%), Postives = 125/250 (50.00%), Query Frame = 1


Query: 2   IQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCI-SICPHCISSHRFHRLLQVRR 61
           +  P WL  +    +F+ CS H  + K+E N+ CLDC   + C +C+ +HR HR+LQ+RR
Sbjct: 15  LNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRR 74

Query: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 121
             YH+VVR+ ++QK ID S VQ Y INSA++VF+ +RPQ R  KG  N C  C RSL + 
Sbjct: 75  SSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDS 134

Query: 122 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDYDE 181
           +  CSLGCK+   +K   +L+  L+  +      ++       DE T  T       ++ 
Sbjct: 135 FRFCSLGCKLG-GMKRDPSLTFSLRGKHGREYEGEW-----ESDEATTPTKIRKTCAFNR 194

Query: 182 PMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSIS-----------IN 240
            MS  S  +                  YL G   S  S ++    +S            +
Sbjct: 195 LMSGLSISTVKCD--------------YLSGDQPSSSSGDESGFKLSPGTPPIYNHRNSS 244

[Close]

BLAST of CmoCh12G011790 vs. NCBI nr
Match: gi|659070775|ref|XP_008456605.1| (PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 2.8e-123
Identity = 214/242 (88.43%), Postives = 230/242 (95.04%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYD 181

Query: 181 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHRSP 240
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI+RRKGIPHRSP
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSP 241

Query: 241 LC 242
           LC
Sbjct: 242 LC 242

[Close]

BLAST of CmoCh12G011790 vs. NCBI nr
Match: gi|778666345|ref|XP_011648727.1| (PREDICTED: uncharacterized protein LOC101202757 isoform X1 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-121
Identity = 214/243 (88.07%), Postives = 230/243 (94.65%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 181 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSK-ISNEDMTTSISINRRKGIPHRS 240
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ K IS+ED+ TS+SI+RRKGIPHRS
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSISRRKGIPHRS 241

Query: 241 PLC 242
           PLC
Sbjct: 242 PLC 243

[Close]

BLAST of CmoCh12G011790 vs. NCBI nr
Match: gi|659070777|ref|XP_008456613.1| (PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo])

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 211/239 (88.28%), Postives = 227/239 (94.98%), Query Frame = 1


Query: 4   KPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 63
           KPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 64  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 123
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 124 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYDEPM 183
           CSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 184 SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHRSPLC 242
            SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI+RRKGIPHRSPLC
Sbjct: 182 -SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISISRRKGIPHRSPLC 239

[Close]

BLAST of CmoCh12G011790 vs. NCBI nr
Match: gi|778666348|ref|XP_011648728.1| (PREDICTED: uncharacterized protein LOC101202757 isoform X2 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 8.4e-120
Identity = 211/240 (87.92%), Postives = 227/240 (94.58%), Query Frame = 1


Query: 4   KPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 63
           KPAWLEALY QKFFVGCSFHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 64  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 123
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 124 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYDEPM 183
           CSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDDEMTNETP STIVDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 184 SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSK-ISNEDMTTSISINRRKGIPHRSPLC 242
            SSSSGSE MSI   PI+RKKR+G+ LCGRS+ K IS+ED+ TS+SI+RRKGIPHRSPLC
Sbjct: 182 -SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSISRRKGIPHRSPLC 240

[Close]

BLAST of CmoCh12G011790 vs. NCBI nr
Match: gi|223528946|gb|EEF30940.1| (zinc ion binding protein, putative [Ricinus communis])

HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114
Identity = 201/244 (82.38%), Postives = 222/244 (90.98%), Query Frame = 1


Query: 1   GIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 60
           GIQKPAWL+ALYTQKFFVGCS+HETAKKNEKN+CCLDCC+SICPHC+ SHRFHRLLQVRR
Sbjct: 28  GIQKPAWLDALYTQKFFVGCSYHETAKKNEKNVCCLDCCVSICPHCVPSHRFHRLLQVRR 87

Query: 61  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 120
           YVYHDVVRLEDL+KLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQEP
Sbjct: 88  YVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 147

Query: 121 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 180
           + HCSLGCKVDFVLKH ++LS YL+ CNSL LS DFL+ QDMGDDEMTNETPHSTIVD +
Sbjct: 148 FFHCSLGCKVDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGDDEMTNETPHSTIVDSE 207

Query: 181 EPM--SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISINRRKGIPHR 240
           +PM  SS SSGSE MS+  T I+RKKR+G+Y+CGRS SK+S+EDM TS+S  RRKGIPHR
Sbjct: 208 DPMSWSSGSSGSENMSMVCTEIVRKKRSGLYVCGRSVSKVSDEDMATSMS--RRKGIPHR 267

Query: 241 SPLC 242
           SPLC
Sbjct: 268 SPLC 269

The following BLAST results are available for this feature:

BLAST of CmoCh12G011790 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G011790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI85_CUCSA	8.2e-122	88.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009420 PE=4 SV=1	[more]
B9SZN4_RICCO	1.3e-114	82.38	Zinc ion binding protein, putative OS=Ricinus communis GN=RCOM_1372310 PE=4 SV=1	[more]
A0A067K5B9_JATCU	3.5e-112	81.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16980 PE=4 SV=1	[more]
A0A061GPE1_THECC	7.7e-112	81.30	PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_038233 PE=4 ...	[more]
D7T4Z5_VITVI	1.3e-111	81.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00600 PE=4 SV=...	[more]

BLAST of CmoCh12G011790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G12646.1	1.1e-96	67.06	PLATZ transcription factor family protein	[more]
AT3G60670.1	6.5e-62	50.00	PLATZ transcription factor family protein	[more]
AT1G31040.1	2.7e-52	47.50	PLATZ transcription factor family protein	[more]
AT1G32700.1	8.3e-33	41.34	PLATZ transcription factor family protein	[more]
AT1G76590.1	7.0e-32	34.00	PLATZ transcription factor family protein	[more]

BLAST of CmoCh12G011790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070775\|ref\|XP_008456605.1\|	2.8e-123	88.43	PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo]	[more]
gi\|778666345\|ref\|XP_011648727.1\|	1.2e-121	88.07	PREDICTED: uncharacterized protein LOC101202757 isoform X1 [Cucumis sativus]	[more]
gi\|659070777\|ref\|XP_008456613.1\|	2.0e-121	88.28	PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo]	[more]
gi\|778666348\|ref\|XP_011648728.1\|	8.4e-120	87.92	PREDICTED: uncharacterized protein LOC101202757 isoform X2 [Cucumis sativus]	[more]
gi\|223528946\|gb\|EEF30940.1\|	1.8e-114	82.38	zinc ion binding protein, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011790.1	CmoCh12G011790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 59..130 score: 5.5
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 1..241 score: 1.6E
None	No IPR available	PANTHER	PTHR31065:SF11	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..241 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011790	Cucsa.132770	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G011790	CmaCh12G011570	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011790	CmaCh05G012400	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011790	Csa2G009420	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011790	MELO3C004436	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011790	ClCG02G017180	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011790	CSPI02G02430	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011790	Lsi11G003930	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011790	Cp4.1LG11g10250	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011790	Cp4.1LG07g11040	Cucurbita pepo (Zucchini)	cmocpeB178
CmoCh12G011790	MELO3C004436.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011790	CsaV3_2G003600	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011790	Cla97C02G042870	Watermelon (97103) v2	cmowmbB161
CmoCh12G011790	Bhi06G001570	Wax gourd	cmowgoB0171
CmoCh12G011790	CsGy2G002510	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011790	Carg23016	Silver-seed gourd	carcmoB1441
CmoCh12G011790	Carg17450	Silver-seed gourd	carcmoB0356

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G011790	CmoCh05G012680	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011790	Cucurbita moschata (Rifu)	cmocmoB084
CmoCh12G011790	Cucumber (Gy14) v1	cgycmoB0959
CmoCh12G011790	Cucurbita maxima (Rimu)	cmacmoB123
CmoCh12G011790	Wild cucumber (PI 183967)	cmocpiB146
CmoCh12G011790	Cucumber (Chinese Long) v2	cmocuB147
CmoCh12G011790	Melon (DHL92) v3.5.1	cmomeB145
CmoCh12G011790	Watermelon (Charleston Gray)	cmowcgB156
CmoCh12G011790	Watermelon (97103) v1	cmowmB156
CmoCh12G011790	Watermelon (97103) v1	cmowmB169
CmoCh12G011790	Cucurbita pepo (Zucchini)	cmocpeB169
CmoCh12G011790	Bottle gourd (USVL1VR-Ls)	cmolsiB173
CmoCh12G011790	Melon (DHL92) v3.6.1	cmomedB160
CmoCh12G011790	Cucumber (Chinese Long) v3	cmocucB0171
CmoCh12G011790	Watermelon (97103) v2	cmowmbB173