Carg17450 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17450
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PLATZ transcription factor family protein
Location	Cucurbita_argyrosperma_scaffold_084 : 192265 .. 193183 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGTTCTTTCAGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTTATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGGTTAGTATCTTGGAAAGATTTTGAATTCTTGAATTCTGATGGTTTTGTGTTCGTGTTCTTAGTCTATGGTTTTGTTTTTGTTCTTAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGTTCCCTTGGATGCAAGGTGTTCTTTTCTAAAACTTGAAATTTGATCCGTTTTTACATTAATATCAAAAGGGTTGTTGAATTTTGAACCATATGATCATCAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTGCTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAGTAGTAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

mRNA sequence

ATGATGATGTTCTTTCAGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTTATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGTTCCCTTGGATGCAAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTGCTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAGTAGTAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

Coding sequence (CDS)

ATGATGATGTTCTTTCAGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACACTCAGAAATTCTTCGTGGGATGTTTATTTCACGAGACAGCAAAGAAGAACGAGAAGAACATTTGTTGTTTAGATTGCTGTATTAGTATTTGCCCTCATTGTATATCATCGCACCGGTTTCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCATGACGTTGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGTTCTAACGTTCAGCCTTATACCATTAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAATAGACAATTCAAAGGGTCGGGAAATTACTGCACTTCTTGTGCTCGAAGTCTCCAAGAACCTTATATTCATTGTTCCCTTGGATGCAAGGTGGATTTCGTTCTGAAGCATAAGAGGAACTTATCTTCATATCTCAAACCGTGTAATTCTCTCCCACTCAGTATGGATTTTTTAGTTCAAGACATGGGAGACGACGAGATGACGAACGAGACTCCTCATTCCACCATTGTCGACTACGACGAACCGATGAGCTCGTCGTCTTCAGGATCTGAAACCATGAGCATCCCTCACACACCCATAATTCGAAAGAAAAGAACCGGTGTTTATCTGTGCGGAAGATCTGCTTCGAAAATTTCTAACGAAGACATGACAACGAGTATAAGCATCAGTAGTAGAAGGAAAGGCATCCCTCATCGTTCTCCTTTGTGTTAA

Protein sequence

MMMFFQGIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRSPLC

Homology

[Close]

BLAST of Carg17450 vs. NCBI nr
Match: XP_022938038.1 (uncharacterized protein LOC111444245 [Cucurbita moschata])

HSP 1 Score: 493.8 bits (1270), Expect = 3.4e-136
Identity = 239/246 (97.15%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 3   MFFQGIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLL 62
           M   GIQKPAWLEALYTQKFFVGC FHETAKKNEKNICCLDCCISICPHCISSHRFHRLL
Sbjct: 1   MTIMGIQKPAWLEALYTQKFFVGCSFHETAKKNEKNICCLDCCISICPHCISSHRFHRLL 60

Query: 63  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS 122
           QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS
Sbjct: 61  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS 120

Query: 123 LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV 182
           LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV
Sbjct: 121 LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV 180

Query: 183 DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIP 242
           DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRS SKISNEDMTTSISI +RRKGIP
Sbjct: 181 DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSTSKISNEDMTTSISI-NRRKGIP 240

Query: 243 HRSPLC 249
           HRSPLC
Sbjct: 241 HRSPLC 245

[Close]

BLAST of Carg17450 vs. NCBI nr
Match: XP_022965904.1 (uncharacterized protein LOC111465649 [Cucurbita maxima])

HSP 1 Score: 490.7 bits (1262), Expect = 2.9e-135
Identity = 238/246 (96.75%), Postives = 239/246 (97.15%), Query Frame = 0


Query: 3   MFFQGIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLL 62
           M   GIQKPAWLEALYTQKFFVGC FHET KKNEKNICCLDCCISICPHCISSHRFHRLL
Sbjct: 1   MTIMGIQKPAWLEALYTQKFFVGCSFHETTKKNEKNICCLDCCISICPHCISSHRFHRLL 60

Query: 63  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS 122
           QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS
Sbjct: 61  QVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARS 120

Query: 123 LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV 182
           LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV
Sbjct: 121 LQEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIV 180

Query: 183 DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIP 242
           DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLC RSASKISNEDMTT+ISI SRRKGIP
Sbjct: 181 DYDEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCRRSASKISNEDMTTNISI-SRRKGIP 240

Query: 243 HRSPLC 249
           HRSPLC
Sbjct: 241 HRSPLC 245

[Close]

BLAST of Carg17450 vs. NCBI nr
Match: XP_008456605.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo])

HSP 1 Score: 443.4 bits (1139), Expect = 5.2e-121
Identity = 214/243 (88.07%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 186
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYD 181

Query: 187 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRS 246
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI SRRKGIPHRS
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISI-SRRKGIPHRS 241

Query: 247 PLC 249
           PLC
Sbjct: 242 PLC 242

[Close]

BLAST of Carg17450 vs. NCBI nr
Match: XP_011648727.1 (PREDICTED: uncharacterized protein LOC101202757 isoform X1 [Cucumis sativus] >KGN60754.1 hypothetical protein Csa_2G009420 [Cucumis sativus])

HSP 1 Score: 438.0 bits (1125), Expect = 2.2e-119
Identity = 214/244 (87.70%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 186
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 187 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASK-ISNEDMTTSISISSRRKGIPHR 246
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ K IS+ED+ TS+SI SRRKGIPHR
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSI-SRRKGIPHR 241

Query: 247 SPLC 249
           SPLC
Sbjct: 242 SPLC 243

[Close]

BLAST of Carg17450 vs. NCBI nr
Match: XP_008456613.1 (PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 3.8e-119
Identity = 211/240 (87.92%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 10  KPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 69
           KPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 70  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 129
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 130 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYDEPM 189
           CSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 190 SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRSPLC 249
            SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI SRRKGIPHRSPLC
Sbjct: 182 -SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISI-SRRKGIPHRSPLC 239

[Close]

BLAST of Carg17450 vs. TAIR10
Match: AT2G12646.1 (PLATZ transcription factor family protein)

HSP 1 Score: 322.8 bits (826), Expect = 1.9e-88
Identity = 163/255 (63.92%), Postives = 190/255 (74.51%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWL+ALY +KFFVGC +HETAKKNE+N+CCLDCC S+CPHC+ SHRFHRLLQVRR
Sbjct: 2   GIQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRR 61

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDLQKLIDCSNVQ YTINSAKVVFIKKRPQNRQFKG+GNYCTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 121

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QD-MGDDEM-TNETPHSTIVD 186
           YIHCSLGCKVDFV+K  R+++ +LKPC++L L  D+++ QD + DDE+   ETP ST+VD
Sbjct: 122 YIHCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVD 181

Query: 187 YDEPMS--------SSSSGSETMSIPHTPIIRKKRTGVYLCGRSAS--KISNEDMTTSIS 246
            DE MS                             TG  LC +SA+  K  +ED     +
Sbjct: 182 GDESMSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGFCLCAKSANSYKEVSEDPDDISA 241

Query: 247 ISSRRKGIPHRSPLC 249
             +RRKG+P RSPLC
Sbjct: 242 CINRRKGVPQRSPLC 256

[Close]

BLAST of Carg17450 vs. TAIR10
Match: AT3G60670.1 (PLATZ transcription factor family protein)

HSP 1 Score: 235.0 bits (598), Expect = 5.1e-62
Identity = 123/248 (49.60%), Postives = 157/248 (63.31%), Query Frame = 0


Query: 11  PAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVYH 70
           PAWLE L   KFF  CL HE  KKNEKNI C+DCC++ICPHC+SSH  HRLLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 71  DVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIHC 130
           DV+R+ED  KL+DCS +QPYT NS+KVVFI +RPQ+RQF+GSGN C +C RSLQ PY+ C
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGSGNICITCDRSLQSPYLFC 126

Query: 131 SLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDY-DEPMS 190
            L CK+  V+  +R LS +L+ CN L L+          DE+T  TP ST+        S
Sbjct: 127 CLSCKISDVIMRQRGLSGFLRVCNVLDLT----------DEVTTTTPSSTLEPTGSNRTS 186

Query: 191 SSSSGSETMSI---------PHTPIIRKKRTGV-YLCGRSASKISNEDMTTSISISSRRK 248
           S SSG+E   +           T I+RKKR+ +   C R    +S  +    ++  +RRK
Sbjct: 187 SESSGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRRK 244

[Close]

BLAST of Carg17450 vs. TAIR10
Match: AT1G31040.1 (PLATZ transcription factor family protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47
Identity = 106/237 (44.73%), Postives = 131/237 (55.27%), Query Frame = 0


Query: 10  KPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 69
           KPAWLE L  + FF  C  HET +K+EKN+ CL CC+S+CPHC+ SHR H LLQVRRYVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 70  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 129
           HDVVRL DL+KLIDCS VQPYTIN AKV+F+ +R Q+R  K S N C +C R LQEP+  
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRA-KVSSNVCFTCDRILQEPFHF 137

Query: 130 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDYDEPMS 189
           CSL CKVD++     +LSS L   +    + + L  D G D++   +      D      
Sbjct: 138 CSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMD-GHDQLGEISTMEDGEDILXXXX 197

Query: 190 SSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRSP 247
                                   YL G   S + N           RRKG PHR+P
Sbjct: 198 XXXXXXXXXXXXXXXXXXXXXXSNYLPGMVLSSLGN-----------RRKGAPHRAP 241

[Close]

BLAST of Carg17450 vs. TAIR10
Match: AT1G32700.1 (PLATZ transcription factor family protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 89/242 (36.78%), Postives = 120/242 (49.59%), Query Frame = 0


Query: 11  PAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCIS-ICPHCISSHRFHRLLQVRRYVY 70
           P WL+ L  +KFFV C  H  + K+E N+ CLDC    +C  C+S H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 71  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 130
           HDV+R+ ++QK +D + VQ Y INSAKVVF+ +RPQ R  KG  N C  C RSL + +  
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFRF 131

Query: 131 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNETPHSTIVDYDEPMS 190
           CSLGCK+  + K KR                          E TN      + D D+  S
Sbjct: 132 CSLGCKISGISKKKRK-------------------------EWTN-----NLSDSDDSYS 191

Query: 191 SSSSG-----SETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHR 247
           S+S G      + M+   TP              S   +S      +  I+ RRKGIPHR
Sbjct: 192 STSIGRLKKNDDIMNNSFTP--------------STPPLS----AVNRRIAKRRKGIPHR 205

[Close]

BLAST of Carg17450 vs. TAIR10
Match: AT1G76590.1 (PLATZ transcription factor family protein)

HSP 1 Score: 134.4 bits (337), Expect = 9.5e-32
Identity = 92/259 (35.52%), Postives = 127/259 (49.03%), Query Frame = 0


Query: 8   IQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCI-SICPHCISSHRFHRLLQVRR 67
           +  P WL  +    +F+ C  H  + K+E N+ CLDC   + C +C+ +HR HR+LQ+RR
Sbjct: 15  LNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRR 74

Query: 68  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 127
             YH+VVR+ ++QK ID S VQ Y INSA++VF+ +RPQ R  KG  N C  C RSL + 
Sbjct: 75  SSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLLDS 134

Query: 128 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLVQDMGDDEMTNET---------- 187
           +  CSLGCK+   +K   +L+  L+  +      ++       DE T  T          
Sbjct: 135 FRFCSLGCKLG-GMKRDPSLTFSLRGKHGREYEGEW-----ESDEATTPTKIRKTCAFNR 194

Query: 188 -----PHSTI-VDY---DEPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNED 247
                  ST+  DY   D+P SSS   S     P TP I   R                 
Sbjct: 195 LMSGLSISTVKCDYLSGDQPSSSSGDESGFKLSPGTPPIYNHRN---------------- 244

[Close]

BLAST of Carg17450 vs. TrEMBL
Match: tr|A0A1S3C4B1|A0A1S3C4B1_CUCME (uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 3.5e-121
Identity = 214/243 (88.07%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 186
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYD 181

Query: 187 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRS 246
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI SRRKGIPHRS
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISI-SRRKGIPHRS 241

Query: 247 PLC 249
           PLC
Sbjct: 242 PLC 242

[Close]

BLAST of Carg17450 vs. TrEMBL
Match: tr|A0A0A0LI85|A0A0A0LI85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.5e-119
Identity = 214/244 (87.70%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRR
Sbjct: 2   GIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRR 61

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEP
Sbjct: 62  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEP 121

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 186
           Y+HCSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFLV QD+GDDEMTNETP STIVDYD
Sbjct: 122 YVHCSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLVPQDVGDDEMTNETPRSTIVDYD 181

Query: 187 EPMSSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASK-ISNEDMTTSISISSRRKGIPHR 246
           EPM SSSSGSE MSI   PI+RKKR+G+ LCGRS+ K IS+ED+ TS+SI SRRKGIPHR
Sbjct: 182 EPM-SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKIISSEDIATSMSI-SRRKGIPHR 241

Query: 247 SPLC 249
           SPLC
Sbjct: 242 SPLC 243

[Close]

BLAST of Carg17450 vs. TrEMBL
Match: tr|A0A1S3C3R2|A0A1S3C3R2_CUCME (uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496511 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.5e-119
Identity = 211/240 (87.92%), Postives = 226/240 (94.17%), Query Frame = 0


Query: 10  KPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRRYVY 69
           KPAWLEALY QKFFVGC FHET+KKNEKNICCLDCCISICPHC+SSHRFHRLLQVRRYVY
Sbjct: 2   KPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVY 61

Query: 70  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEPYIH 129
           HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGN+CTSC RSLQEPY+H
Sbjct: 62  HDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNFCTSCDRSLQEPYVH 121

Query: 130 CSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYDEPM 189
           CSLGCKVDFVLKHKR+L+SYL+PCNSLPLSMDFL+ QD+GDDEMTNETP STIVDYDEPM
Sbjct: 122 CSLGCKVDFVLKHKRDLTSYLRPCNSLPLSMDFLIPQDVGDDEMTNETPRSTIVDYDEPM 181

Query: 190 SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPHRSPLC 249
            SSSSGSE MSI   PI+RKKR+G+ LCGRS+ KIS+ED+ TSISI SRRKGIPHRSPLC
Sbjct: 182 -SSSSGSENMSIAQPPIVRKKRSGLCLCGRSSRKISSEDIATSISI-SRRKGIPHRSPLC 239

[Close]

BLAST of Carg17450 vs. TrEMBL
Match: tr|B9SZN4|B9SZN4_RICCO (Zinc ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1372310 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 3.5e-113
Identity = 200/245 (81.63%), Postives = 221/245 (90.20%), Query Frame = 0


Query: 7   GIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQVRR 66
           GIQKPAWL+ALYTQKFFVGC +HETAKKNEKN+CCLDCC+SICPHC+ SHRFHRLLQVRR
Sbjct: 28  GIQKPAWLDALYTQKFFVGCSYHETAKKNEKNVCCLDCCVSICPHCVPSHRFHRLLQVRR 87

Query: 67  YVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSLQEP 126
           YVYHDVVRLEDL+KLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSLQEP
Sbjct: 88  YVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEP 147

Query: 127 YIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIVDYD 186
           + HCSLGCKVDFVLKH ++LS YL+ CNSL LS DFL+ QDMGDDEMTNETPHSTIVD +
Sbjct: 148 FFHCSLGCKVDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGDDEMTNETPHSTIVDSE 207

Query: 187 EPM--SSSSSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKGIPH 246
           +PM  SS SSGSE MS+  T I+RKKR+G+Y+CGRS SK+S+EDM TS+   SRRKGIPH
Sbjct: 208 DPMSWSSGSSGSENMSMVCTEIVRKKRSGLYVCGRSVSKVSDEDMATSM---SRRKGIPH 267

Query: 247 RSPLC 249
           RSPLC
Sbjct: 268 RSPLC 269

[Close]

BLAST of Carg17450 vs. TrEMBL
Match: tr|A5CBF0|A5CBF0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004172 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.5e-111
Identity = 202/248 (81.45%), Postives = 219/248 (88.31%), Query Frame = 0


Query: 4   FFQGIQKPAWLEALYTQKFFVGCLFHETAKKNEKNICCLDCCISICPHCISSHRFHRLLQ 63
           F QGIQKPAWLEALYTQKFFV C  HETAKKNEKNI CLDCC SICPHC+  HRFHRL+Q
Sbjct: 470 FRQGIQKPAWLEALYTQKFFVSCSIHETAKKNEKNILCLDCCTSICPHCLQFHRFHRLVQ 529

Query: 64  VRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCARSL 123
           VRRYVYHDVVRLEDL+KLIDCSNVQ YTINSAKVVFIKKRPQNRQFKGSGNYCTSC RSL
Sbjct: 530 VRRYVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSL 589

Query: 124 QEPYIHCSLGCKVDFVLKHKRNLSSYLKPCNSLPLSMDFLV-QDMGDDEMTNETPHSTIV 183
           QEPYIHCSLGCKVDF+LKH ++LS YL+ C+SL LS DFLV  DMG+DEMTNETPHSTIV
Sbjct: 590 QEPYIHCSLGCKVDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTIV 649

Query: 184 DYDEPMSSS--SSGSETMSIPHTPIIRKKRTGVYLCGRSASKISNEDMTTSISISSRRKG 243
           D DEPMSSS  SSGSE MS+  T I+RKKR+G+Y+CGRSASK+S EDM TS+   SRRKG
Sbjct: 650 DCDEPMSSSSGSSGSENMSMMCTEIVRKKRSGLYVCGRSASKVSEEDMATSM---SRRKG 709

Query: 244 IPHRSPLC 249
           IPHRSP+C
Sbjct: 710 IPHRSPMC 714

The following BLAST results are available for this feature:

BLAST of Carg17450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938038.1	3.4e-136	97.15	uncharacterized protein LOC111444245 [Cucurbita moschata]	[more]
XP_022965904.1	2.9e-135	96.75	uncharacterized protein LOC111465649 [Cucurbita maxima]	[more]
XP_008456605.1	5.2e-121	88.07	PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo]	[more]
XP_011648727.1	2.2e-119	87.70	PREDICTED: uncharacterized protein LOC101202757 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008456613.1	3.8e-119	87.92	PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo]	[more]

BLAST of Carg17450 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G12646.1	1.9e-88	63.92	PLATZ transcription factor family protein	[more]
AT3G60670.1	5.1e-62	49.60	PLATZ transcription factor family protein	[more]
AT1G31040.1	1.2e-47	44.73	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.1e-32	36.78	PLATZ transcription factor family protein	[more]
AT1G76590.1	9.5e-32	35.52	PLATZ transcription factor family protein	[more]

BLAST of Carg17450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg17450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4B1\|A0A1S3C4B1_CUCME	3.5e-121	88.07	uncharacterized protein LOC103496511 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LI85\|A0A0A0LI85_CUCSA	1.5e-119	87.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009420 PE=4 SV=1	[more]
tr\|A0A1S3C3R2\|A0A1S3C3R2_CUCME	2.5e-119	87.92	uncharacterized protein LOC103496511 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|B9SZN4\|B9SZN4_RICCO	3.5e-113	81.63	Zinc ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1372310 P...	[more]
tr\|A5CBF0\|A5CBF0_VITVI	2.5e-111	81.45	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004172 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17450-RA	Carg17450-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 65..136 e-value: 9.8E-26 score: 90.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..248
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 6..248
None	No IPR available	PANTHER	PTHR31065:SF11	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 6..248

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17450	Csa2G009420	Cucumber (Chinese Long) v2	carcuB0282
Carg17450	MELO3C004436	Melon (DHL92) v3.5.1	carmeB0258
Carg17450	ClCG02G017180	Watermelon (Charleston Gray)	carwcgB0245
Carg17450	CSPI02G02430	Wild cucumber (PI 183967)	carcpiB0286
Carg17450	Cucsa.132770	Cucumber (Gy14) v1	carcgyB0300
Carg17450	CmaCh05G012400	Cucurbita maxima (Rimu)	carcmaB0356
Carg17450	CmaCh12G011570	Cucurbita maxima (Rimu)	carcmaB0355
Carg17450	CmoCh12G011790	Cucurbita moschata (Rifu)	carcmoB0356
Carg17450	CmoCh05G012680	Cucurbita moschata (Rifu)	carcmoB0357
Carg17450	Lsi11G003930	Bottle gourd (USVL1VR-Ls)	carlsiB226
Carg17450	Cp4.1LG07g11040	Cucurbita pepo (Zucchini)	carcpeB0362
Carg17450	Cp4.1LG11g10250	Cucurbita pepo (Zucchini)	carcpeB0357
Carg17450	CsGy2G002510	Cucumber (Gy14) v2	carcgybB0269
Carg17450	MELO3C004436.2	Melon (DHL92) v3.6.1	carmedB0268
Carg17450	CsaV3_2G003600	Cucumber (Chinese Long) v3	carcucB0286
Carg17450	Cla97C02G042870	Watermelon (97103) v2	carwmbB0259
Carg17450	Bhi06G001570	Wax gourd	carwgoB0331

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17450	Carg23016	Silver-seed gourd	carcarB297

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17450	Watermelon (97103) v2	carwmbB0261
Carg17450	Wax gourd	carwgoB0337
Carg17450	Silver-seed gourd	carcarB148
Carg17450	Cucumber (Gy14) v2	carcgybB0268
Carg17450	Cucumber (Gy14) v1	carcgyB0302
Carg17450	Cucurbita maxima (Rimu)	carcmaB0353
Carg17450	Cucurbita maxima (Rimu)	carcmaB0354
Carg17450	Cucurbita moschata (Rifu)	carcmoB0355
Carg17450	Cucurbita moschata (Rifu)	carcmoB0354
Carg17450	Cucurbita pepo (Zucchini)	carcpeB0358
Carg17450	Cucurbita pepo (Zucchini)	carcpeB0360
Carg17450	Wild cucumber (PI 183967)	carcpiB0285
Carg17450	Cucumber (Chinese Long) v2	carcuB0281
Carg17450	Cucumber (Chinese Long) v3	carcucB0284
Carg17450	Bottle gourd (USVL1VR-Ls)	carlsiB229
Carg17450	Melon (DHL92) v3.5.1	carmeB0256
Carg17450	Melon (DHL92) v3.6.1	carmedB0266
Carg17450	Watermelon (Charleston Gray)	carwcgB0247
Carg17450	Watermelon (97103) v1	carwmB0242
Carg17450	Watermelon (97103) v1	carwmB0244