ClCG02G017180 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGTTCCACTTCCTATTATTTGCCAAAAGAACGGACAGAATACAAGGGATTTGAAGCTAAAAAGCTTGTACAATAACTTCCCAAATAGTAATATGTTTTCATTTTTTTTCCTTGGTATTTGTATTTAGTATTCAATCAAAATCCCTTTTCTTATTCCCCATGAGGCCTTTTCTTGTTGTTTTTTCAACTTTCAATGTGTTTGAATGCTTTAAAAAAAGAGTTTAAAAGCTAGATTGAAAAAAGGGTTCAGTGTTGGACTCACAACTTTTGTAAAAATTTTGGTTTGTATGTTGCATAATTTTGTGTATATATAACATGTGTTTGAATTCTATTGAGGAATGGAACTTTTAACGTTGGAGTTTGTGTAGTTTTGTTGTTTTGATTCTGGTTAAATTACAAGTTTAGCTCCGAACTATAAGTTTATGTTTATTTGGTTTTTTTTTCTTATTTTTTGGTGTTTAAACTTTTAAAAGTACATACTTTTATGTCTTGAATTTTCAAATTTATGTACGTTACATCTATAAATTTCCAATTTTGTGTCTAGTAGGACATGTGTTGACCTATTTGATATTTTAAAAAATTATTAATATAACTAGACCCAAAAATTGAGAGTTTACCGTCCTATTAGATATAAAATTTAAATTTATATCTATGAAGTTAGTTATTATTTTATAAATCTTGAATGTGATAGTGACCTTTTAATAATAAATATTTAAATTTCAGGGACTCCTTGTGTGACACAACCCTGAAGTTCAATACTCAACCTAAAGTTTAGTGATTAAACTAGATTATTTTAAATCAAACAAAAAAAATAGTATGAATTTCTATCTATGCTTATGAATGGTGTGTTTGATTTGCAAATTTATCCTTTTACAAAATTGGCATACAGCACGAAAATTAGGTTTTAGATATTTTTCTTAGTGTCACAGTAACAAAGGGAGAAGATTAAACTCTCAACCTTTTTATAATATTATTATTGAATCATGTTCAAGTTTTAGAAGTATTTATTAGTTTGTGAGATTAGAAATAAATATATAGCTGGAGATGAATTAAATTATATATCAAAAATAAATATAATTTACCTTAAGGTTACATTAGTTTAATATATATATTCGCTCGAACACCATCCGAAATTATATATTATTATAATCATGTTGTTCATCAACTCTCTTAATATGTCAAATTAAACTTAGTTTAAACGATAACTTACATATACCATCTCTCTTATAATTAGAGCTAGCTACAAATATAATCCTCTTACATTATTTCCTATACCAAAAGAAAAAAAAAAAATTCTCCTCATATGAAATTCAAGAACCTATAAATTGAACAATTACATAGCAATCACTTTTAGATAAGTTTTTTATTTAGATAACTATCATTATTATTTTGATGTTCTTAAATATTGTTACAGAGTCTACTTTACAGCAATATTAATATTGAAGCATTTGCTAAAAAGTAGAAAATAAGTCAAAGAATTTCCTAGTCAAACAGCCCCCTTTTTTTTAATAGAAAGCTAAGGTCTTCCATTGAGAACTATTTTAGATTTTTTTTAAAAAAAAAAATCTAAGAAAATCAATTTTCTTTTCGGGGTTGCATTTTATTATTTATTTATTTATTTTTAACGATGGTTTCTTTGAGTTAGTAGGGAGGAGTATAATTAAAATTATTAATTTAAATGACAAAACTGCTAAAAATATTTTATAAATATAGTAAAATGTAATGTCTATCAAAAGAAATCATTTTGCTAAACAAAGAAAACTAGCGTAAACTTACATAACAACAAGAAGAGTGGGTTCATTTGTTGTCATTTTGTCAATTATTTGATTATAGTAAGAAAAGATATAAAAACACCAATTACTATTTTAATAGTTAATGTTTTGATTCCTTACTTCAACAATTGTTGAACTAAAAAAAACAATCAATACTCATTCCATCCAATATTCATATAGAGAATAATTATCTTTTACATATTAGCATTTCAATGCCAAATCACTCATTTCCATCAAACCCTTCACATTATACAATCGGTAAAACACAACACATTTCTTAAACATCACAATCGCAATATATGTATATATTATATATATAATTCAATCAATTGTAGAAGCAAAGCCAAAAGTGTTAATATTGACAAAACTTTTGATCATATAATGTAAATCAAATTGCCTCATGATATTAAGGTTTTAATAAGCCCTACCTTCATTAGACCTAGCTACATAGTTCCCATATTATATCTTTATTCATTATAGTTCCAATGAACAATATGGCTGCTTTAAGATGATATTGACAACACTAAATGAAGACAAAACCAATTCAACTTTTCTCTCTCTTTCTCTCCCTCTATTCTATTTTTAACTAATTTGTTTATGAATTTTTATTATTTTTTTTTCTAAAAGAACTTTGTTTATCAAGCTAACAAATCTCCAATTTTTTTTTTTTTTTTTTTTTTTATACATCACTTTGANACAATCGGTAAAACACAACACATTTCTTAAACATCACAATCGCAATATATGTATATATTATATATATAATTCAATCAATTGTAGAAGCAAAGCCAAAAGTGTTAATATTGACAAAACTTTTGATCATATAATGTAAATCAAATTGCCTCATGATATTAAGGTTTTAATAAGCCCTACCTTCATTAGACCTAGCTACATAGTTCCCATATTATATCTTTATTCATTATAGTTCCAATGAACAATATGGCTGCTTTAAGATGATATTGACAACACTAAATGAAGACAAAACCAATTCAACTTTTCTCTCTCTTTCTCTCCCTCTATTCTATTTTTAACTAATTTGTTTATGAATTTTTATTATTTTTTTTTCTAAAAGAACTTTGTTTATCAAGCTAACAAATCTCCAATTTTTTTTTTTTTTTTTTTCTTTATACATCACTTCTAGAGATTTTTTTCTTCATAATCTCTCTCTCTCTCTCTCTCTCTCCCTCCTTTGTCTATGTAGAAAAAAAAAAAGGCTTCCTATTGAACATTGTGCTTCATGGGATTGGGGGTCCTTAATTGTCTTTTCCTTCTCCCTTTTATTCTGCCTCTAATTACTCTTTAATAATTGCTTTGTAAAACCATATAATTTTCTTTTAATCTTTTTTGTTTTTTTTTGAAATTTTATTATCTGTATAATAACTTATAAATTAAAGCCAAGAAAAATACAACCCTATAGATTCACAGAAAATTGCCAAAAAAATAAAAATAAAAATAAAAATAATAATAATGAAAATATAATTTATATATACAAATTAAATGTAAGTTTAGAAATGATACATAAATGAACCATGATCATATCTAAATAAGAGGGATGCTAATCACATGAAAATAAGGTTAAAAATGCTTTAAAAAAATAAAATTACTATCCAAACCAACAACATGCATATTCCTTTTTTGATGTCTTAATCATAGAAATTCAAAAAGTTAAACGTATTTCACACAATTTTCGATAAATCAATTCATAAATTTTTCAAATATAACAAAAAGACGGTTAAATGTTATTACCTAATAAATAAATATCTTTTTTGGGGGACCACTAAATATTTTTAAAACAGCCTTGATTTTTAGTTTTTCTCCAAAATAAATATTTTTTCTTTCGAGAAAAAATATCATTTAGATTGGTAGAAATGTATTGCCAAAGGAAAAAAAAAATAAAATCACAAAATACAACCGATAATTTTATCGTTCTACGTATTCTAATTTTGAATGATATTAGTAAATTTACCCTTTATTTTTTTAAAGTTTCGATTTTATTCCTAATAGTAATAATATTCAATGGTATCTCTATTGACTAAATAACATTTTTCCATCCGACATTAAACTTTTAACAATAGTTGATAATGGTATCTCAAAAGAAAAAACATATATAGTATTTTTTTTTAAAAAAAAAACCATAAATTGCACAAAAGAAATATAGAATTAAACCAACAAATAAGTATGCCAGAAACTAAAGATCTAATAGATCTAGACATAAATCAAAACAATGATGCAATAATAGAGATAAACTATAAAGAAAAAAAAAAAAAAAGATAATTTATGGATCTTTATTTTGGAATTAGTAAGAGATGGGCATCAATAGAGAGAGAAAATGGGCAGCTAATTCAAGAAGAGATTAGTTAAGTTAAGCAATTGTAGCACTTAAGCCAAGAAGATGAGTGGCAAATTGTTTAAATTTAGAATGGGAGACATAAAAACACCACCCATGTTCCTTCTCATATATCTTACTTCTCTTTATAAATATAAATATTCAACATAATTAATTAATTAATTAATTAATTAATTAATTAATAAGCCTCCCAATTGACAAAATGTTGTGTAGTTCCCCAAGGAATAAATTTAATTAGTTTTATGTCCTTTGCTCCTTTGCGAAACTCCATAAATACTCATTTTATCTCTTCATGTTTGCCCTATTAATCCCTCTCTCCAAAATTTCTCATTAAAAACCCAAATATTCTTCATTTCTAAGCCTCTTTCAAAGTTTTCAAGTGTTTTATGTCATCATGGTATTTTCTTTTTATATAATTTTCTCTCTAATATCTTCTCTATATGCTCTTAATTTGGTTTTTGGTGATTCAATTAATGATGGGGTTTTGTATTTCTTTTTTCTTCAGGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAATTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCATCTCACCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCACGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGGTTAGTATAACTGAAAATTAATGTTAAATTGATCTCTCCCTCTTTCCTTAATGCAATTGAGCTTAATTAATTAAACTAATTTGAAGGTTTTGTTTGTAAATTTCTTAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGGTCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAGGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTAAACAATTTTATTTATTTTTTCTCACATTAAATTACAATTTTGGTTCTTATAGTTCGAAGAAAGTTAAAATTTATATTGCAATATAGTTTTAAAAATTAGAATCTCATCTATATGATTTGATAAATCATCACAAATAACTGTTCGAAATTATGAGAGTTTTATCAAATTGTAAGGATGAATTCTAACTTTTAAATTATAAAGACTAAATTTTAATTTTCTTAATTTAACTTAGATTTTAATGGGTTGATGATGAAATTAAGTTAGAGTTTTTCATTAATTCAGGTGGATTTTGTGTTGAAGCACAAGAGGGACTTAACTTCTTGCCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTAGGTCGACAGTTGTGGACTACGATGAGCCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACTAATTGTTCGAAAGAAGAGAAGCGGTCTTTGTTTATGTGGAAGATCAGCTAGAAAGATATCTAGTGAAGACATAGCAACAAGTATGAGCATAAGTAGAAGAAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA ATGTCTTGTTCCACTTCCTATTATTTGCCAAAAGAACGGACAGAATACAAGGGATTTGAAGCTAAAAAGCTTGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAATTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCATCTCACCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCACGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGGTCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAGGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTGTTGAAGCACAAGAGGGACTTAACTTCTTGCCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTAGGTCGACAGTTGTGGACTACGATGAGCCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACTAATTGTTCGAAAGAAGAGAAGCGGTCTTTGTTTATGTGGAAGATCAGCTAGAAAGATATCTAGTGAAGACATAGCAACAAGTATGAGCATAAGTAGAAGAAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA ATGTCTTGTTCCACTTCCTATTATTTGCCAAAAGAACGGACAGAATACAAGGGATTTGAAGCTAAAAAGCTTGGAATTCAAAAGCCTGCATGGTTAGAAGCACTTTACAACCAAAAATTCTTTGTGGGATGTTCATTTCATGAGACTTCAAAGAAGAATGAGAAGAACATTTGTTGTTTGGATTGTTGTATTAGTATTTGCCCTCATTGCTTGTCATCTCACCGATTCCATCGCCTTCTTCAAGTTCGTCGATATGTTTATCACGACGTCGTTCGACTCGAAGATCTTCAAAAACTTATAGATTGCTCCAATGTTCAGCCTTATACCATAAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAATAGACAATTTAAAGGGTCTGGAAATTATTGCACTTCTTGTGATAGAAGTCTTCAGGAACCTTATGTTCATTGCTCTCTTGGATGCAAGGTGGATTTTGTGTTGAAGCACAAGAGGGACTTAACTTCTTGCCTTAGACCATGCAATTCTCTCCCACTTAGTATGGATTTTTTAGTTCCACAAGATGTAGGAGATGATGATATGACAAACGAGACTCCTAGGTCGACAGTTGTGGACTACGATGAGCCAATGAGCTCGTCTTCAGGATCCGAGAACATGAGCATAGCTCAACCACTAATTGTTCGAAAGAAGAGAAGCGGTCTTTGTTTATGTGGAAGATCAGCTAGAAAGATATCTAGTGAAGACATAGCAACAAGTATGAGCATAAGTAGAAGAAAAGGCATCCCTCATAGATCTCCCTTGTGTTAA MSCSTSYYLPKERTEYKGFEAKKLGIQKPAWLEALYNQKFFVGCSFHETSKKNEKNICCLDCCISICPHCLSSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYVHCSLGCKVDFVLKHKRDLTSCLRPCNSLPLSMDFLVPQDVGDDDMTNETPRSTVVDYDEPMSSSSGSENMSIAQPLIVRKKRSGLCLCGRSARKISSEDIATSMSISRRKGIPHRSPLC
BLAST of ClCG02G017180 vs. TrEMBL
Match: A0A0A0LI85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009420 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-135 Identity = 235/243 (96.71%), Postives = 240/243 (98.77%), Query Frame = 1
BLAST of ClCG02G017180 vs. TrEMBL
Match: A0A061GPE1_THECC (PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_038233 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 3.1e-114 Identity = 202/247 (81.78%), Postives = 222/247 (89.88%), Query Frame = 1
BLAST of ClCG02G017180 vs. TrEMBL
Match: B9SZN4_RICCO (Zinc ion binding protein, putative OS=Ricinus communis GN=RCOM_1372310 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.5e-113 Identity = 198/244 (81.15%), Postives = 218/244 (89.34%), Query Frame = 1
BLAST of ClCG02G017180 vs. TrEMBL
Match: B9N6Y6_POPTR (Zinc-binding family protein OS=Populus trichocarpa GN=POPTR_0006s05950g PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.2e-112 Identity = 196/245 (80.00%), Postives = 216/245 (88.16%), Query Frame = 1
BLAST of ClCG02G017180 vs. TrEMBL
Match: A0A067K5B9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16980 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.8e-112 Identity = 199/244 (81.56%), Postives = 219/244 (89.75%), Query Frame = 1
BLAST of ClCG02G017180 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 363.2 bits (931), Expect = 1.3e-100 Identity = 174/256 (67.97%), Postives = 203/256 (79.30%), Query Frame = 1
BLAST of ClCG02G017180 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein) HSP 1 Score: 235.7 bits (600), Expect = 3.2e-62 Identity = 125/249 (50.20%), Postives = 156/249 (62.65%), Query Frame = 1
BLAST of ClCG02G017180 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein) HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51 Identity = 112/240 (46.67%), Postives = 144/240 (60.00%), Query Frame = 1
BLAST of ClCG02G017180 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34 Identity = 92/249 (36.95%), Postives = 125/249 (50.20%), Query Frame = 1
BLAST of ClCG02G017180 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-33 Identity = 78/177 (44.07%), Postives = 99/177 (55.93%), Query Frame = 1
BLAST of ClCG02G017180 vs. NCBI nr
Match: gi|659070775|ref|XP_008456605.1| (PREDICTED: uncharacterized protein LOC103496511 isoform X1 [Cucumis melo]) HSP 1 Score: 493.0 bits (1268), Expect = 3.2e-136 Identity = 233/242 (96.28%), Postives = 240/242 (99.17%), Query Frame = 1
BLAST of ClCG02G017180 vs. NCBI nr
Match: gi|778666345|ref|XP_011648727.1| (PREDICTED: uncharacterized protein LOC101202757 isoform X1 [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 2.1e-135 Identity = 235/243 (96.71%), Postives = 240/243 (98.77%), Query Frame = 1
BLAST of ClCG02G017180 vs. NCBI nr
Match: gi|659070777|ref|XP_008456613.1| (PREDICTED: uncharacterized protein LOC103496511 isoform X2 [Cucumis melo]) HSP 1 Score: 486.5 bits (1251), Expect = 3.0e-134 Identity = 230/238 (96.64%), Postives = 236/238 (99.16%), Query Frame = 1
BLAST of ClCG02G017180 vs. NCBI nr
Match: gi|778666348|ref|XP_011648728.1| (PREDICTED: uncharacterized protein LOC101202757 isoform X2 [Cucumis sativus]) HSP 1 Score: 483.8 bits (1244), Expect = 1.9e-133 Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 1
BLAST of ClCG02G017180 vs. NCBI nr
Match: gi|1009110110|ref|XP_015893780.1| (PREDICTED: uncharacterized protein LOC107427887 [Ziziphus jujuba]) HSP 1 Score: 419.5 bits (1077), Expect = 4.5e-114 Identity = 204/245 (83.27%), Postives = 218/245 (88.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|