CmoCh12G008790 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G008790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Glutamine dumper 4
Location	Cmo_Chr12 : 8006326 .. 8006781 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGCCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCGCCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGGTCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA

mRNA sequence

ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGCCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCGCCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGGTCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA

Coding sequence (CDS)

ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGCCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCGCCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGGTCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA

Homology

[Close]

BLAST of CmoCh12G008790 vs. Swiss-Prot
Match: GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.6e-13
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 1


Query: 17  PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESAHG 76
           P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S   L+   + +R  D+E    
Sbjct: 24  PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLS-GYLDGEENQSRERDLEVGDV 83

Query: 77  KGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDC 118
           K    +    P    +K LVIMAG V P+++ATP+     C
Sbjct: 84  K--PDKTAVKPVALPEKFLVIMAGNVKPTYLATPSVKTCTC 120

[Close]

BLAST of CmoCh12G008790 vs. Swiss-Prot
Match: GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-12
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 17  PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESA-H 76
           P + WH+PVPYLFG LAA+ +LI +ALLI+ACSY W +S S            D+E+   
Sbjct: 24  PHSPWHSPVPYLFGGLAAMLALICVALLILACSY-WRLSGSA---------ERDLEAGDD 83

Query: 77  GKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
            K  +  N    T   +K LVIMAG+V P+++ATP +
Sbjct: 84  AKPDNDTNKTKHTEMPEKFLVIMAGDVRPTYLATPAT 110

[Close]

BLAST of CmoCh12G008790 vs. Swiss-Prot
Match: GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 8   SFITMETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAAR 67
           + +  +T SP   W TPVPYLFG LAA+  LIA ALL++ACSY W +S           R
Sbjct: 18  TMVESQTRSP---WRTPVPYLFGGLAAMLGLIAFALLLLACSY-WRLS-----------R 77

Query: 68  AADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS--LGLDC 118
             + E    + G+         F++K+LVIMAG+ NP+F+ATP +  + LDC
Sbjct: 78  QTEDEEKQTESGE---KVVAKAFEEKILVIMAGQNNPTFLATPVAAKICLDC 111

[Close]

BLAST of CmoCh12G008790 vs. Swiss-Prot
Match: GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 1


Query: 16  SPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESAH 75
           +P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S    +S     +  D E   
Sbjct: 25  TPQSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLS----SSGEEDGQNVDEEKES 84

Query: 76  GKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDC 118
             G    N      +++K LVIMAGE  P ++ATP      C
Sbjct: 85  RSGDKAAN----GAYEEKFLVIMAGEDLPRYLATPAMKKCTC 117

[Close]

BLAST of CmoCh12G008790 vs. Swiss-Prot
Match: GDU4_ARATH (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana GN=GDU4 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-11
Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 1


Query: 3   AASRESFITMETP-SPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNS 62
           A S ESF     P SP   WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S S  +S
Sbjct: 17  ATSVESFGNHRPPISP---WHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLSTSGDDS 76

Query: 63  HASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDCSKVT 122
                   D E     G    +       ++K+LVIMAG+  P F+ATP +     +K  
Sbjct: 77  ----GERVDEEKESRSGVKAAS----AACEEKVLVIMAGDDLPRFLATPAA-----NKCM 136

Query: 123 CCREMKATA-AEHG-GAGQLQMG 143
           C  E +     E G GAG+ +MG
Sbjct: 137 CGHEGRMVIFKEDGIGAGEEKMG 142

[Close]

BLAST of CmoCh12G008790 vs. TrEMBL
Match: A0A0A0LMC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G058100 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.8e-25
Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 13  ETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADME 72
           E  +P T WH+P+PYLFGALAAV  LI+ +LLI+ CSYC  VS S+LN +  AAR ADME
Sbjct: 4   EAAAPITPWHSPLPYLFGALAAVCILISFSLLILGCSYCRKVSVSILNGNHGAARDADME 63

Query: 73  SAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGL 116
           S  GK     NP P  +F DK+LVIMAG+VNPSFIATP S GL
Sbjct: 64  SGRGKSDGDLNPLPCAMFNDKVLVIMAGQVNPSFIATPMSTGL 106

[Close]

BLAST of CmoCh12G008790 vs. TrEMBL
Match: A0A061GQE7_THECC (Glutamine dumper 4 OS=Theobroma cacao GN=TCM_038812 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.9e-17
Identity = 69/153 (45.10%), Postives = 88/153 (57.52%), Query Frame = 1


Query: 4   ASRESF-ITMETPS----PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASV 63
           A+RE F +T +TPS    P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  +
Sbjct: 2   AAREPFNVTAKTPSGVTTPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGYL 61

Query: 64  LNSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLG---- 123
            N         D+E+   KG + +    P V + K LV+MAGEVNP+F+ATP S      
Sbjct: 62  ENGEGGQGE-RDLEAGESKGDETQKGRAP-VMEQKFLVVMAGEVNPTFLATPISSSKSSS 121

Query: 124 -LDCSKVTCCREMKATAAEHG----GAGQLQMG 143
             D S+ +CC E K    E G     AG  QMG
Sbjct: 122 FADKSEKSCCSE-KGEKLEGGEKQDSAGDDQMG 150

[Close]

BLAST of CmoCh12G008790 vs. TrEMBL
Match: M5XMI1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012155mg PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.0e-16
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1


Query: 4   ASRESF-ITMETPSPTTL---WHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVL 63
           A RE F +T   P+ T+    WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  + 
Sbjct: 2   AGREPFNVTARAPAVTSQRSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGYLE 61

Query: 64  NSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
           +    A    D+E+  G  GD      P VF++K+LVIMAG+  P+F+ATP S
Sbjct: 62  SGENGAGSEQDLEAGEGGKGDETAQKAPPVFEEKILVIMAGDAKPTFLATPMS 113

[Close]

BLAST of CmoCh12G008790 vs. TrEMBL
Match: U5GBM9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s18790g PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-15
Identity = 58/130 (44.62%), Postives = 78/130 (60.00%), Query Frame = 1


Query: 4   ASRESF-ITMETPSPTTL-----WHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSAS 63
           A+RE F +T   P+P  +     WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  
Sbjct: 2   AAREPFNVTERAPNPGAVTPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGY 61

Query: 64  VLNSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATP-----TS 123
           + + +    R  +      K GDG +   P  F++K+LVIMAGEV P+F+ATP     TS
Sbjct: 62  LESGNEGGERDLEAGEGENKSGDG-SEKKPIAFEEKILVIMAGEVKPTFLATPMSSRSTS 121

[Close]

BLAST of CmoCh12G008790 vs. TrEMBL
Match: W9RVB1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022857 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-15
Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = 1


Query: 3   AASRESFITMETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSH 62
           A +R   +T    SP   WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  +    
Sbjct: 9   ATARPPTVTAAQRSP---WHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGYLDGGD 68

Query: 63  ASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
            +  R  D+E+  GKG D +  PP  VF++K+LVIMAG+  P+F+ATP S
Sbjct: 69  GAGDR--DLEAGDGKGDDEKKTPP--VFEEKILVIMAGQAKPTFLATPVS 110

[Close]

BLAST of CmoCh12G008790 vs. TAIR10
Match: AT5G57685.1 (AT5G57685.1 glutamine dumper 3)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 1


Query: 17  PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESAHG 76
           P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S   L+   + +R  D+E    
Sbjct: 24  PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLS-GYLDGEENQSRERDLEVGDV 83

Query: 77  KGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDC 118
           K    +    P    +K LVIMAG V P+++ATP+     C
Sbjct: 84  K--PDKTAVKPVALPEKFLVIMAGNVKPTYLATPSVKTCTC 120

[Close]

BLAST of CmoCh12G008790 vs. TAIR10
Match: AT4G25760.1 (AT4G25760.1 glutamine dumper 2)

HSP 1 Score: 71.6 bits (174), Expect = 4.6e-13
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 17  PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESA-H 76
           P + WH+PVPYLFG LAA+ +LI +ALLI+ACSY W +S S            D+E+   
Sbjct: 24  PHSPWHSPVPYLFGGLAAMLALICVALLILACSY-WRLSGSA---------ERDLEAGDD 83

Query: 77  GKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
            K  +  N    T   +K LVIMAG+V P+++ATP +
Sbjct: 84  AKPDNDTNKTKHTEMPEKFLVIMAGDVRPTYLATPAT 110

[Close]

BLAST of CmoCh12G008790 vs. TAIR10
Match: AT5G24920.1 (AT5G24920.1 glutamine dumper 5)

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-12
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 8   SFITMETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAAR 67
           + +  +T SP   W TPVPYLFG LAA+  LIA ALL++ACSY W +S           R
Sbjct: 18  TMVESQTRSP---WRTPVPYLFGGLAAMLGLIAFALLLLACSY-WRLS-----------R 77

Query: 68  AADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS--LGLDC 118
             + E    + G+         F++K+LVIMAG+ NP+F+ATP +  + LDC
Sbjct: 78  QTEDEEKQTESGE---KVVAKAFEEKILVIMAGQNNPTFLATPVAAKICLDC 111

[Close]

BLAST of CmoCh12G008790 vs. TAIR10
Match: AT4G31730.1 (AT4G31730.1 glutamine dumper 1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 1


Query: 16  SPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADMESAH 75
           +P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S    +S     +  D E   
Sbjct: 25  TPQSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLS----SSGEEDGQNVDEEKES 84

Query: 76  GKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDC 118
             G    N      +++K LVIMAGE  P ++ATP      C
Sbjct: 85  RSGDKAAN----GAYEEKFLVIMAGEDLPRYLATPAMKKCTC 117

[Close]

BLAST of CmoCh12G008790 vs. TAIR10
Match: AT2G24762.1 (AT2G24762.1 glutamine dumper 4)

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 60/143 (41.96%), Postives = 76/143 (53.15%), Query Frame = 1


Query: 3   AASRESFITMETP-SPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNS 62
           A S ESF     P SP   WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S S  +S
Sbjct: 17  ATSVESFGNHRPPISP---WHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLSTSGDDS 76

Query: 63  HASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDCSKVT 122
                   D E     G    +       ++K+LVIMAG+  P F+ATP +     +K  
Sbjct: 77  ----GERVDEEKESRSGVKAAS----AACEEKVLVIMAGDDLPRFLATPAA-----NKCM 136

Query: 123 CCREMKATA-AEHG-GAGQLQMG 143
           C  E +     E G GAG+ +MG
Sbjct: 137 CGHEGRMVIFKEDGIGAGEEKMG 142

[Close]

BLAST of CmoCh12G008790 vs. NCBI nr
Match: gi|659071530|ref|XP_008460400.1| (PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 1


Query: 13  ETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADME 72
           +  +P T WH+P+PYLFGALAAV  LI+ +LLI+ CSYC  +S S+LN +  AAR ADME
Sbjct: 4   QATAPVTPWHSPLPYLFGALAAVCILISFSLLILGCSYCRKISVSILNGNHDAARDADME 63

Query: 73  SAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLG 115
           S  GKG D  NP P  VF DK+LVIMAGEVNPSFIATP S G
Sbjct: 64  SGRGKGDDDPNPLPCAVFNDKVLVIMAGEVNPSFIATPMSTG 105

[Close]

BLAST of CmoCh12G008790 vs. NCBI nr
Match: gi|778674059|ref|XP_011650119.1| (PREDICTED: protein GLUTAMINE DUMPER 3-like [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 8.4e-25
Identity = 64/103 (62.14%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 13  ETPSPTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARAADME 72
           E  +P T WH+P+PYLFGALAAV  LI+ +LLI+ CSYC  VS S+LN +  AAR ADME
Sbjct: 4   EAAAPITPWHSPLPYLFGALAAVCILISFSLLILGCSYCRKVSVSILNGNHGAARDADME 63

Query: 73  SAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGL 116
           S  GK     NP P  +F DK+LVIMAG+VNPSFIATP S GL
Sbjct: 64  SGRGKSDGDLNPLPCAMFNDKVLVIMAGQVNPSFIATPMSTGL 106

[Close]

BLAST of CmoCh12G008790 vs. NCBI nr
Match: gi|590580541|ref|XP_007014097.1| (Glutamine dumper 4 [Theobroma cacao])

HSP 1 Score: 95.5 bits (236), Expect = 8.4e-17
Identity = 69/153 (45.10%), Postives = 88/153 (57.52%), Query Frame = 1


Query: 4   ASRESF-ITMETPS----PTTLWHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASV 63
           A+RE F +T +TPS    P + WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  +
Sbjct: 2   AAREPFNVTAKTPSGVTTPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGYL 61

Query: 64  LNSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLG---- 123
            N         D+E+   KG + +    P V + K LV+MAGEVNP+F+ATP S      
Sbjct: 62  ENGEGGQGE-RDLEAGESKGDETQKGRAP-VMEQKFLVVMAGEVNPTFLATPISSSKSSS 121

Query: 124 -LDCSKVTCCREMKATAAEHG----GAGQLQMG 143
             D S+ +CC E K    E G     AG  QMG
Sbjct: 122 FADKSEKSCCSE-KGEKLEGGEKQDSAGDDQMG 150

[Close]

BLAST of CmoCh12G008790 vs. NCBI nr
Match: gi|470120697|ref|XP_004296430.1| (PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-16
Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 1


Query: 4   ASRESF-ITMETPSPTTL---WHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASVL 63
           A+RE F +T+ +P+ TT    WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  + 
Sbjct: 2   AAREPFNVTVRSPAVTTQRSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WKLSGYLE 61

Query: 64  NSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
           NS     R  D+E+  G  GD     PP VF++K+LVIMAG+  P+F+ATP S
Sbjct: 62  NSENDGER--DLEAGEGGKGDETQKAPP-VFEEKILVIMAGDAKPTFLATPIS 110

[Close]

BLAST of CmoCh12G008790 vs. NCBI nr
Match: gi|658035651|ref|XP_008353355.1| (PREDICTED: protein GLUTAMINE DUMPER 3-like [Malus domestica])

HSP 1 Score: 92.8 bits (229), Expect = 5.4e-16
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 1


Query: 4   ASRESF-ITMETPSPTTL----WHTPVPYLFGALAAVSSLIAIALLIIACSYCWNVSASV 63
           A RE F +T   P  TT+    WH+PVPYLFG LAA+  LIA ALLI+ACSY W +S  +
Sbjct: 2   AGREPFNVTARAPEMTTVQRSPWHSPVPYLFGGLAAMLGLIAFALLILACSY-WRLSGYL 61

Query: 64  LNSHASAARAADMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTS 113
            N    + R  D+E+  G+GG+     PP VF++K+LVIMAG+  P+F+ATPTS
Sbjct: 62  ENHENGSER--DLEA--GEGGESAQKVPP-VFEEKILVIMAGDAKPTFLATPTS 109

The following BLAST results are available for this feature:

BLAST of CmoCh12G008790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GDU3_ARATH	9.6e-13	44.55	Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1	[more]
GDU2_ARATH	8.1e-12	44.33	Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1	[more]
GDU5_ARATH	1.8e-11	41.96	Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2	[more]
GDU1_ARATH	3.1e-11	43.14	Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1	[more]
GDU4_ARATH	4.0e-11	41.96	Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana GN=GDU4 PE=2 SV=1	[more]

BLAST of CmoCh12G008790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMC7_CUCSA	5.8e-25	62.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G058100 PE=4 SV=1	[more]
A0A061GQE7_THECC	5.9e-17	45.10	Glutamine dumper 4 OS=Theobroma cacao GN=TCM_038812 PE=4 SV=1	[more]
M5XMI1_PRUPE	5.0e-16	47.79	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012155mg PE=4 SV=1	[more]
U5GBM9_POPTR	1.1e-15	44.62	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s18790g PE=4 SV=1	[more]
W9RVB1_9ROSA	1.1e-15	49.09	Uncharacterized protein OS=Morus notabilis GN=L484_022857 PE=4 SV=1	[more]

BLAST of CmoCh12G008790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57685.1	5.4e-14	44.55	glutamine dumper 3	[more]
AT4G25760.1	4.6e-13	44.33	glutamine dumper 2	[more]
AT5G24920.1	1.0e-12	41.96	glutamine dumper 5	[more]
AT4G31730.1	1.7e-12	43.14	glutamine dumper 1	[more]
AT2G24762.1	2.3e-12	41.96	glutamine dumper 4	[more]

BLAST of CmoCh12G008790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071530\|ref\|XP_008460400.1\|	3.4e-26	63.73	PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis melo]	[more]
gi\|778674059\|ref\|XP_011650119.1\|	8.4e-25	62.14	PREDICTED: protein GLUTAMINE DUMPER 3-like [Cucumis sativus]	[more]
gi\|590580541\|ref\|XP_007014097.1\|	8.4e-17	45.10	Glutamine dumper 4 [Theobroma cacao]	[more]
gi\|470120697\|ref\|XP_004296430.1\|	1.4e-16	51.33	PREDICTED: protein GLUTAMINE DUMPER 3 [Fragaria vesca subsp. vesca]	[more]
gi\|658035651\|ref\|XP_008353355.1\|	5.4e-16	50.88	PREDICTED: protein GLUTAMINE DUMPER 3-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G008790.1	CmoCh12G008790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33228	FAMILY NOT NAMED	coord: 1..112 score: 2.1
None	No IPR available	PANTHER	PTHR33228:SF5	PROTEIN GLUTAMINE DUMPER 1-RELATED	coord: 1..112 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G008790	Cucsa.089470	Cucumber (Gy14) v1	cgycmoB0176
CmoCh12G008790	CmaCh12G008730	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G008790	Cla022829	Watermelon (97103) v1	cmowmB163
CmoCh12G008790	Csa2G058100	Cucumber (Chinese Long) v2	cmocuB150
CmoCh12G008790	MELO3C004042	Melon (DHL92) v3.5.1	cmomeB164
CmoCh12G008790	ClCG11G012280	Watermelon (Charleston Gray)	cmowcgB135
CmoCh12G008790	CSPI02G05920	Wild cucumber (PI 183967)	cmocpiB151
CmoCh12G008790	Lsi11G007490	Bottle gourd (USVL1VR-Ls)	cmolsiB143
CmoCh12G008790	Cp4.1LG07g07220	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G008790	MELO3C004042.2	Melon (DHL92) v3.6.1	cmomedB181
CmoCh12G008790	Cla97C11G218150	Watermelon (97103) v2	cmowmbB157
CmoCh12G008790	Bhi06G001137	Wax gourd	cmowgoB0181
CmoCh12G008790	CsGy2G006040	Cucumber (Gy14) v2	cgybcmoB161
CmoCh12G008790	Carg16448	Silver-seed gourd	carcmoB1223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G008790	Cucurbita pepo (Zucchini)	cmocpeB168