Carg16448 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGTCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCACCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGATCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGTCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCACCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGATCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA ATGGCTGCAGCCAGCAGAGAATCTTTTATCACCATGGAGACACCCTCACCCACCACACTGTGGCATACACCGGTGTCGTACTTATTCGGCGCCCTCGCTGCGGTTTCAAGTCTTATAGCCATTGCCCTCTTGATCATTGCCTGCTCATATTGCTGGAACGTTTCTGCATCTGTATTGAACAGCCACGCCAGTGCTGCTCGAGCCACCGACATGGAGTCTGCTCATGGCAAGGGCGGAGATGGCCGGAATCCGCCGCCACCCACGGTGTTTCAGGACAAGATGTTGGTAATAATGGCGGGAGAAGTTAACCCAAGTTTCATCGCCACCCCCACGTCGCTGGGTTTAGATTGTAGTAAAGTTACGTGCTGCCGTGAAATGAAGGCCACGGCGGCGGAGCATGGTGGCGCTGATCAGTTGCAGATGGGTCCCACAAGCTCGTTGTTTTCTTTGGGGTAA MAAASRESFITMETPSPTTLWHTPVSYLFGALAAVSSLIAIALLIIACSYCWNVSASVLNSHASAARATDMESAHGKGGDGRNPPPPTVFQDKMLVIMAGEVNPSFIATPTSLGLDCSKVTCCREMKATAAEHGGADQLQMGPTSSLFSLG
BLAST of Carg16448 vs. NCBI nr
Match: XP_022938322.1 (protein GLUTAMINE DUMPER 2-like [Cucurbita moschata]) HSP 1 Score: 290.8 bits (743), Expect = 2.6e-75 Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of Carg16448 vs. NCBI nr
Match: XP_022969590.1 (protein GLUTAMINE DUMPER 2-like [Cucurbita maxima]) HSP 1 Score: 281.2 bits (718), Expect = 2.1e-72 Identity = 143/151 (94.70%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of Carg16448 vs. NCBI nr
Match: XP_023537956.1 (protein GLUTAMINE DUMPER 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 275.0 bits (702), Expect = 1.5e-70 Identity = 142/151 (94.04%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of Carg16448 vs. NCBI nr
Match: XP_022153323.1 (protein GLUTAMINE DUMPER 3-like [Momordica charantia]) HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27 Identity = 72/124 (58.06%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of Carg16448 vs. NCBI nr
Match: XP_011650119.1 (PREDICTED: protein GLUTAMINE DUMPER 3-like [Cucumis sativus] >KGN61126.1 hypothetical protein Csa_2G058100 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 4.0e-23 Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Carg16448 vs. TAIR10
Match: AT5G57685.1 (glutamine dumper 3) HSP 1 Score: 71.2 bits (173), Expect = 6.0e-13 Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of Carg16448 vs. TAIR10
Match: AT5G24920.1 (glutamine dumper 5) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of Carg16448 vs. TAIR10
Match: AT4G25760.1 (glutamine dumper 2) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Carg16448 vs. TAIR10
Match: AT4G31730.1 (glutamine dumper 1) HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Carg16448 vs. TAIR10
Match: AT2G24762.1 (glutamine dumper 4) HSP 1 Score: 63.9 bits (154), Expect = 9.6e-11 Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of Carg16448 vs. Swiss-Prot
Match: sp|Q9FHH5|GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of Carg16448 vs. Swiss-Prot
Match: sp|Q3E965|GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 0
BLAST of Carg16448 vs. Swiss-Prot
Match: sp|Q9SW07|GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.0e-11 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Carg16448 vs. Swiss-Prot
Match: sp|O81775|GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Carg16448 vs. Swiss-Prot
Match: sp|Q8S8A0|GDU4_ARATH (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of Carg16448 vs. TrEMBL
Match: tr|A0A0A0LMC7|A0A0A0LMC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058100 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23 Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0
BLAST of Carg16448 vs. TrEMBL
Match: tr|A0A1S3CDN6|A0A1S3CDN6_CUCME (protein GLUTAMINE DUMPER 1-like OS=Cucumis melo OX=3656 GN=LOC103499225 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.7e-20 Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of Carg16448 vs. TrEMBL
Match: tr|A0A2I4FHA8|A0A2I4FHA8_9ROSI (protein GLUTAMINE DUMPER 3 OS=Juglans regia OX=51240 GN=LOC108998781 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.8e-17 Identity = 65/149 (43.62%), Postives = 87/149 (58.39%), Query Frame = 0
BLAST of Carg16448 vs. TrEMBL
Match: tr|A0A2I4EN71|A0A2I4EN71_9ROSI (protein GLUTAMINE DUMPER 2-like OS=Juglans regia OX=51240 GN=LOC108991151 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15 Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Carg16448 vs. TrEMBL
Match: tr|A0A2P6QTQ2|A0A2P6QTQ2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0403911 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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