BLAST of CmoCh12G006210 vs. Swiss-Prot
Match:
PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN=EMB975 PE=2 SV=1)
HSP 1 Score: 482.3 bits (1240), Expect = 6.6e-135
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 1
Query: 31 QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
Q N ++ KNL PRRTKLPPD GVN FL+K P + +++ +
Sbjct: 34 QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93
Query: 91 EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
+++E+ NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94 QVQESV------NDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153
Query: 151 PPGLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDLKPEE-NVSKVLNRWAP 210
P GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213
Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
FL+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273
Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
L LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333
Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
DK LV+ALL+EL +RE L L+QQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393
Query: 391 YTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
YT ++H+RYSE+KYREA+SVVWEME +N DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453
Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
EAGF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmoCh12G006210 vs. Swiss-Prot
Match:
PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.3e-10
Identity = 48/206 (23.30%), Postives = 92/206 (44.66%), Query Frame = 1
Query: 284 MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQR 343
++ GF K AW ++ + +Y +I + K + +L L +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK-VGQTSKAKEMLQNLIKE 584
Query: 344 EALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYRE 403
+ +++ ++II ++G + A Y E+G P+VV +T+L++ +
Sbjct: 585 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 644
Query: 404 ALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLIT 463
AL + EM++ DLPAY ++ F D+ A F++L E G P +Y +LI+
Sbjct: 645 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 704
Query: 464 IYLAAGRLAKCKEIYKEAENAGYVMD 490
+ G++ ++YK+ N G D
Sbjct: 705 GFRNLGKMDAAIDLYKKMVNDGISCD 729
BLAST of CmoCh12G006210 vs. Swiss-Prot
Match:
PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)
HSP 1 Score: 64.7 bits (156), Expect = 3.3e-09
Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 1
Query: 356 IIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 SPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
+ D ++ V+ F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
BLAST of CmoCh12G006210 vs. Swiss-Prot
Match:
PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 3.3e-09
Identity = 87/378 (23.02%), Postives = 148/378 (39.15%), Query Frame = 1
Query: 138 ERPLPLPLPH----KLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLK 197
+R L PH + P G N + S AL S+Q Y ++
Sbjct: 254 KRTSVLQRPHIDSNRFVPSGFSNSSVEMMKGPSGTALTSRQ-YCNSGHIV---------- 313
Query: 198 PEENVSKVLNR--WAPFLQKGSLSLTIK--------ELGHMGLADRALKTFCWVQEQPRL 257
ENVS VL R W P ++ +L ++ L M AL F W++ QP
Sbjct: 314 --ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGF 373
Query: 258 YPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVA 317
D + V L R + A +L+ M+R + ++ + L+
Sbjct: 374 KHDGHTYTTMVGNLGRAKQFG-----------AINKLLDEMVRDGCQPN--TVTYNRLIH 433
Query: 318 AKNGKRMLDPSVYV-KLILEIGKNPDKNMLVLALLD------------ELGQREALNLNQ 377
+ L+ ++ V + E G PD+ + L+D ++ QR
Sbjct: 434 SYGRANYLNEAMNVFNQMQEAGCKPDR-VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 493
Query: 378 QDT---SAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSV 437
DT S II + G A +L+ V+ G P++V Y ++ R Y+ AL +
Sbjct: 494 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 553
Query: 438 VWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLA 486
+M+ A D YS+VM++ G L A F ++++ + P +Y L+ ++
Sbjct: 554 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGK 604
BLAST of CmoCh12G006210 vs. Swiss-Prot
Match:
PP408_ARATH (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 9.6e-09
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 1
Query: 334 LALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVH 393
LALLD + + + + +++ R +F+IA L+ + P Y+ L+
Sbjct: 139 LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLIT 198
Query: 394 NRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTP 453
+ E + ALS + +ME DL YS +++L L D S+A+ F++LK +G TP
Sbjct: 199 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 454 TYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLL 498
Y ++I +Y A + + + KE AG + + S LL
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
BLAST of CmoCh12G006210 vs. TrEMBL
Match:
A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1)
HSP 1 Score: 788.9 bits (2036), Expect = 3.7e-225
Identity = 402/501 (80.24%), Postives = 439/501 (87.62%), Query Frame = 1
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDS+ S T++SSILVK NGGI CQ + HF+ NSRRRPPKNLL PRR KLPP+P VNQF
Sbjct: 1 MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
+TS P P F DLISS+ DE EE A +Y D+DVVWDS+EIEAI
Sbjct: 61 NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+ NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 HRLFPDDRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ N PFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFMMDKQITSMLLQAKR 489
BLAST of CmoCh12G006210 vs. TrEMBL
Match:
B9H5I8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2)
HSP 1 Score: 584.3 bits (1505), Expect = 1.4e-163
Identity = 303/477 (63.52%), Postives = 374/477 (78.41%), Query Frame = 1
Query: 27 VAHFQTN-SRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLP 86
+AH T R+ PKN+ YPRR+KLPPD GVN FLKK PQ D+ + L
Sbjct: 1 MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKK----PQTDS-----VQDHSDDLT 60
Query: 87 EEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPL 146
EEE +E E N+ ++VW+SEEIEAI+SLFRGRIPQKPGKL RERPLPLP+
Sbjct: 61 EEEEEEEIEV----------NNGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPV 120
Query: 147 PHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNR 206
P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS VL+
Sbjct: 121 PYKLRPLGLPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDN 180
Query: 207 WAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELK 266
+ +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+QPRL+PDDRVLASTVEVLARNH+LK
Sbjct: 181 CSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLK 240
Query: 267 IPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIG 326
+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSVY K+ILE+G
Sbjct: 241 VPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELG 300
Query: 327 KNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPS 386
KNPDK++L ALLDEL +RE LNL+QQD +A++KV +LGKFE E L++W+ +SGHEPS
Sbjct: 301 KNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPS 360
Query: 387 VVMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFA 446
VVMYT L+H+RYSE KYREAL+VVWEME ++ FDL AY VV+KLFVAL DL RAVRYF+
Sbjct: 361 VVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFS 420
Query: 447 KLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ KR
Sbjct: 421 KLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458
BLAST of CmoCh12G006210 vs. TrEMBL
Match:
A0A067KL02_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1)
HSP 1 Score: 568.5 bits (1464), Expect = 7.8e-159
Identity = 301/503 (59.84%), Postives = 381/503 (75.75%), Query Frame = 1
Query: 3 SLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKK 62
SL+S + S L K+ GI+ + R+ PKNL PRR+KLPPD GVN FLKK
Sbjct: 9 SLYSISPWGSKLSKKRSGITITTMTYSKKKTHYRKLPKNLRSPRRSKLPPDFGVNLFLKK 68
Query: 63 RTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITS 122
+SG D S + I + L EEE +E E+ D+VW+S+EIEAI+S
Sbjct: 69 PSSGV--DNSQMNSIVDDDGDLTEEEGEEQEQLG------------DIVWESDEIEAISS 128
Query: 123 LFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTA----VSSRALMSKQVYKR 182
LF+GRIPQKPGKLNRERPLP PLP+KLRP GLP PK R + A SSRA +QVYK
Sbjct: 129 LFQGRIPQKPGKLNRERPLPHPLPYKLRPLGLPTPKRRMKNASPLVYSSRASTCEQVYKN 188
Query: 183 PDFLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQ 242
P FLI LA+ I+ L P+++ S +L+ + FL+KGSLSLTI+ELGHMGL +RAL+TFCW Q
Sbjct: 189 PRFLISLAKQIKCLNPDQDASFILDDYTRFLRKGSLSLTIRELGHMGLPERALQTFCWAQ 248
Query: 243 EQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAW 302
+QP+L+PDDR+LASTVE+LAR+ +LK+ F+ +FT LASRGV+EAM+RGFI+G L LAW
Sbjct: 249 KQPQLFPDDRILASTVELLARSQDLKVSFDFQKFTGLASRGVIEAMVRGFIRGRSLHLAW 308
Query: 303 KLLVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIK 362
+LL+AAK+ RMLDPSVY KLILE+GKNPDK+++V LLD+L +RE L+L+ QD +AI+K
Sbjct: 309 ELLLAAKHDNRMLDPSVYAKLILELGKNPDKHIIVSQLLDDLSEREDLSLSHQDCTAIMK 368
Query: 363 VSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPF 422
V RL KFE+ E L+ W+ +SG E SVVMYT L+H+RYSE+KYREAL+VVWEME +N F
Sbjct: 369 VCIRLKKFELVETLFGWFKQSGRELSVVMYTTLIHSRYSEKKYREALAVVWEMEGSNCLF 428
Query: 423 DLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIY 482
DLPAY VV+KLFVAL DLSRA RYF+KLKEAGF+PTY IY++LIT+Y+A+GRLAKCKEI
Sbjct: 429 DLPAYRVVIKLFVALNDLSRAARYFSKLKEAGFSPTYDIYKDLITVYMASGRLAKCKEIR 488
Query: 483 KEAENAGYVMDKQITSMLLQAKR 502
+E E AG+ +DKQ+TS LLQ +R
Sbjct: 489 REVEMAGFKLDKQMTSALLQLER 497
BLAST of CmoCh12G006210 vs. TrEMBL
Match:
B9R8P4_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1601230 PE=4 SV=1)
HSP 1 Score: 568.2 bits (1463), Expect = 1.0e-158
Identity = 295/472 (62.50%), Postives = 363/472 (76.91%), Query Frame = 1
Query: 31 QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
+T R++ PKNL PRR+KLPPD GVN FLKK T+G P L+ L +EE +
Sbjct: 7 KTYYRKKLPKNLQSPRRSKLPPDFGVNLFLKKPTTGVDPFQMDSFLVDDGDGDLNQEEKE 66
Query: 91 EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
+ + D+VW+S+EIEAI+SLF+GRIPQ+PG LNRERPLPLPLPHKLR
Sbjct: 67 Q---------------NGDIVWESDEIEAISSLFQGRIPQRPGNLNRERPLPLPLPHKLR 126
Query: 151 PPGLPNPKIRPRTAVSS-RALMSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNRWAPFL 210
P G P+PK R V S R+ + +VYK P FLI LA+ I+ L P+++VS VL+ A FL
Sbjct: 127 PLGPPSPKKHNRNVVVSLRSPICNKVYKNPSFLISLAKQIKCLNPDDDVSAVLDDCARFL 186
Query: 211 QKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNL 270
+KGSLSLTI+ELGHMG DRAL+TFCW Q+QP+LYPDDR+LASTVE+LARN +LK+P +
Sbjct: 187 RKGSLSLTIRELGHMGFPDRALQTFCWAQKQPQLYPDDRILASTVEILARNQDLKVPIDW 246
Query: 271 DEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNPDK 330
+FT LASRGV+EAM+RGF+KGGRL LAWKLL AK+ KRMLD S+Y +LILE+GKNPDK
Sbjct: 247 QKFTSLASRGVIEAMIRGFLKGGRLKLAWKLLAVAKHDKRMLDASLYARLILELGKNPDK 306
Query: 331 NMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYT 390
MLV LLDELG+RE LNL+ QD +AI+KV RL KFE E L++W+ +SGHEPSVVMYT
Sbjct: 307 YMLVEQLLDELGEREDLNLSHQDCTAIMKVCIRLQKFEFVECLFTWFKQSGHEPSVVMYT 366
Query: 391 ALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEA 450
L+H+RYSE+KYREAL+ VWEME ++ FDLPAY VV+KLFVAL DL RAVRYF+KLKEA
Sbjct: 367 TLIHSRYSEKKYREALAGVWEMEGSSFLFDLPAYRVVIKLFVALNDLPRAVRYFSKLKEA 426
Query: 451 GFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
G +PTY IYRNLI IYL +GRLAKCKEI+KEAE AG+ +D+QI LL ++
Sbjct: 427 GLSPTYDIYRNLIKIYLVSGRLAKCKEIWKEAEMAGFKLDEQIKMDLLHQEK 463
BLAST of CmoCh12G006210 vs. TrEMBL
Match:
A0A061FD99_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_034404 PE=4 SV=1)
HSP 1 Score: 561.2 bits (1445), Expect = 1.2e-156
Identity = 297/511 (58.12%), Postives = 383/511 (74.95%), Query Frame = 1
Query: 1 MDSLFSTTTISSIL-VKRNGGISCQIP-VAHFQTNS--RRRPPKNLLYPRRTKLPPDPGV 60
MD + S+ ++ ++ +KR S + +AH T R+ P KN YPRRTKLPPD GV
Sbjct: 19 MDCMVSSFSLHPVIPLKRKVVKSISVTSMAHPNTRICYRKLPKKNHRYPRRTKLPPDFGV 78
Query: 61 NQFLKKRTSGPQ--PDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDS 120
N FL++ +G PDT D I S EE + EE +D + VVW+S
Sbjct: 79 NLFLQEPRTGTDTAPDTQQMDSIPSRSNEEEEESEGKEEEV--------EDQGNYVVWES 138
Query: 121 EEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTA----VSSRAL 180
+E+EAI+SLF+GRIPQKPGKL R+RPLPLPLP+KLRP G P PK + +SSRA
Sbjct: 139 DEVEAISSLFQGRIPQKPGKLGRKRPLPLPLPYKLRPLGSPTPKKHVKLTSPGVISSRAS 198
Query: 181 MSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRA 240
+SK++YK P FLIGLAR I+DL +E+VS VL++WA FL+KGSLS+TI+ELGHMGL RA
Sbjct: 199 VSKRLYKNPSFLIGLAREIKDLDSDEDVSAVLDKWARFLRKGSLSMTIRELGHMGLPQRA 258
Query: 241 LKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIK 300
L+TFCW Q+QP+L+PDDRVL STVEVLARN ELK+P NL++F L++R ++EAM++GFIK
Sbjct: 259 LQTFCWAQKQPQLFPDDRVLTSTVEVLARNRELKLPVNLEKFASLSNRSLIEAMVKGFIK 318
Query: 301 GGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQ 360
GG L+LAWKLL AK KRML PS+Y KLILE+GKNPDK+ LV LLD+LG+RE LNL+Q
Sbjct: 319 GGNLNLAWKLLSVAKQSKRMLHPSIYAKLILELGKNPDKHTLVEDLLDDLGERENLNLSQ 378
Query: 361 QDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWE 420
QD +AI+K+ RLGKFE E L++W+ +SG + +VVMYT L+H+RYSE+KYREAL++VWE
Sbjct: 379 QDCTAIMKICIRLGKFETVESLFNWFKQSGRDTTVVMYTTLLHSRYSEKKYREALALVWE 438
Query: 421 MEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGR 480
MEA+ DLPAY V +K+FVAL DLSRAVRYF+KLKEAGF+PTY IYR+LI+IY+ +GR
Sbjct: 439 MEASECLLDLPAYRVAIKVFVALNDLSRAVRYFSKLKEAGFSPTYDIYRDLISIYMVSGR 498
Query: 481 LAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
LAKCKE+ KEAE AG+ +DK + L + ++
Sbjct: 499 LAKCKEVCKEAEMAGFSLDKHTLAQLSRLEK 521
BLAST of CmoCh12G006210 vs. TAIR10
Match:
AT2G01860.1 (AT2G01860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 482.3 bits (1240), Expect = 3.7e-136
Identity = 262/474 (55.27%), Postives = 347/474 (73.21%), Query Frame = 1
Query: 31 QTNSRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLPEEELD 90
Q N ++ KNL PRRTKLPPD GVN FL+K P + +++ +
Sbjct: 34 QRNHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDE 93
Query: 91 EIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLR 150
+++E+ NDD+D+ VVW+ EEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLR
Sbjct: 94 QVQESV------NDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLR 153
Query: 151 PPGLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDLKPEE-NVSKVLNRWAP 210
P GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W
Sbjct: 154 PLGLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVS 213
Query: 211 FLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPF 270
FL+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+
Sbjct: 214 FLRKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL-- 273
Query: 271 NLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNP 330
L LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SVYVK+ILEI KNP
Sbjct: 274 -LKFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNP 333
Query: 331 DKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVM 390
DK LV+ALL+EL +RE L L+QQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVM
Sbjct: 334 DKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVM 393
Query: 391 YTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLK 450
YT ++H+RYSE+KYREA+SVVWEME +N DLPAY VV+KLFVAL DL RA+RY++KLK
Sbjct: 394 YTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLK 453
Query: 451 EAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
EAGF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 454 EAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmoCh12G006210 vs. TAIR10
Match:
AT2G39230.1 (AT2G39230.1 LATERAL ORGAN JUNCTION)
HSP 1 Score: 68.6 bits (166), Expect = 1.3e-11
Identity = 48/206 (23.30%), Postives = 92/206 (44.66%), Query Frame = 1
Query: 284 MMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQR 343
++ GF K AW ++ + +Y +I + K + +L L +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK-VGQTSKAKEMLQNLIKE 584
Query: 344 EALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYRE 403
+ +++ ++II ++G + A Y E+G P+VV +T+L++ +
Sbjct: 585 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 644
Query: 404 ALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLIT 463
AL + EM++ DLPAY ++ F D+ A F++L E G P +Y +LI+
Sbjct: 645 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 704
Query: 464 IYLAAGRLAKCKEIYKEAENAGYVMD 490
+ G++ ++YK+ N G D
Sbjct: 705 GFRNLGKMDAAIDLYKKMVNDGISCD 729
BLAST of CmoCh12G006210 vs. TAIR10
Match:
AT5G25630.2 (AT5G25630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 64.7 bits (156), Expect = 1.9e-10
Identity = 35/122 (28.69%), Postives = 62/122 (50.82%), Query Frame = 1
Query: 356 IIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 SPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
+ D ++ V+ F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
BLAST of CmoCh12G006210 vs. TAIR10
Match:
AT1G18900.3 (AT1G18900.3 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 64.7 bits (156), Expect = 1.9e-10
Identity = 87/378 (23.02%), Postives = 148/378 (39.15%), Query Frame = 1
Query: 138 ERPLPLPLPH----KLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLK 197
+R L PH + P G N + S AL S+Q Y ++
Sbjct: 254 KRTSVLQRPHIDSNRFVPSGFSNSSVEMMKGPSGTALTSRQ-YCNSGHIV---------- 313
Query: 198 PEENVSKVLNR--WAPFLQKGSLSLTIK--------ELGHMGLADRALKTFCWVQEQPRL 257
ENVS VL R W P ++ +L ++ L M AL F W++ QP
Sbjct: 314 --ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGF 373
Query: 258 YPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVA 317
D + V L R + A +L+ M+R + ++ + L+
Sbjct: 374 KHDGHTYTTMVGNLGRAKQFG-----------AINKLLDEMVRDGCQPN--TVTYNRLIH 433
Query: 318 AKNGKRMLDPSVYV-KLILEIGKNPDKNMLVLALLD------------ELGQREALNLNQ 377
+ L+ ++ V + E G PD+ + L+D ++ QR
Sbjct: 434 SYGRANYLNEAMNVFNQMQEAGCKPDR-VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 493
Query: 378 QDT---SAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSV 437
DT S II + G A +L+ V+ G P++V Y ++ R Y+ AL +
Sbjct: 494 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL 553
Query: 438 VWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLA 486
+M+ A D YS+VM++ G L A F ++++ + P +Y L+ ++
Sbjct: 554 YRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGK 604
BLAST of CmoCh12G006210 vs. TAIR10
Match:
AT5G39980.1 (AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 63.2 bits (152), Expect = 5.4e-10
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 1
Query: 334 LALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSVVMYTALVH 393
LALLD + + + + +++ R +F+IA L+ + P Y+ L+
Sbjct: 139 LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLIT 198
Query: 394 NRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTP 453
+ E + ALS + +ME DL YS +++L L D S+A+ F++LK +G TP
Sbjct: 199 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 454 TYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLL 498
Y ++I +Y A + + + KE AG + + S LL
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
BLAST of CmoCh12G006210 vs. NCBI nr
Match:
gi|659071841|ref|XP_008462173.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])
HSP 1 Score: 792.7 bits (2046), Expect = 3.7e-226
Identity = 406/501 (81.04%), Postives = 444/501 (88.62%), Query Frame = 1
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
M S+ S T++SSILVK NGGI CQI + HF+ NSRRRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1 MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
+TS P P SF DLISS+ DE EE A +Y D+DVVWDS+EIEAI
Sbjct: 61 NNKTSAPSP--SFTDLISSKIFQ------DEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SK+VYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAK GKRMLDPSVYVKLILE+GKNPDKN+LVL LL+ELGQREAL LNQQD++ IIKV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRL KFEIAE+LY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+AN PFDL
Sbjct: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAY+VV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFIMDKQITSMLLQAKR 489
BLAST of CmoCh12G006210 vs. NCBI nr
Match:
gi|449443604|ref|XP_004139567.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus])
HSP 1 Score: 788.9 bits (2036), Expect = 5.3e-225
Identity = 402/501 (80.24%), Postives = 439/501 (87.62%), Query Frame = 1
Query: 1 MDSLFSTTTISSILVKRNGGISCQIPVAHFQTNSRRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDS+ S T++SSILVK NGGI CQ + HF+ NSRRRPPKNLL PRR KLPP+P VNQF
Sbjct: 1 MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
Query: 61 KKRTSGPQPDTSFPDLISSEKIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAI 120
+TS P P F DLISS+ DE EE A +Y D+DVVWDS+EIEAI
Sbjct: 61 NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
Query: 181 FLIGLARAIRDLKPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+ NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 HRLFPDDRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVYVKLILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVS 360
LVAAK GKRMLDPSVYVKLILE+GKNPDKNMLVL LL+ELGQREAL LNQQD + I+KV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
Query: 361 TRLGKFEIAERLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDL 420
TRLGKFEIAE+LYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ N PFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
Query: 421 PAYSVVMKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVV+KLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFMMDKQITSMLLQAKR 489
BLAST of CmoCh12G006210 vs. NCBI nr
Match:
gi|1009170746|ref|XP_015866362.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ziziphus jujuba])
HSP 1 Score: 588.6 bits (1516), Expect = 1.0e-164
Identity = 311/476 (65.34%), Postives = 375/476 (78.78%), Query Frame = 1
Query: 27 VAHFQTNSRRRPPKNLLYP-RRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLP 86
VAH + RRR PKNL YP RRTKLPPD GVN FLK T+ P D P + + E+
Sbjct: 33 VAH--SYGRRRLPKNLRYPPRRTKLPPDLGVNLFLK--TTKPVND---PTMKTQEE---- 92
Query: 87 EEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPL 146
EEE +E EE + D++ D VWDS+EIEAITSLF+GRIPQKPGKLNRERPLPLPL
Sbjct: 93 EEEEEEEEEGEEQQHQPEDNDHDDFVWDSDEIEAITSLFQGRIPQKPGKLNRERPLPLPL 152
Query: 147 PHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNRW 206
P+KLRP GLP K RP+ +L S +YK P LIGLAR I+ L EE+VS VLN+W
Sbjct: 153 PYKLRPLGLPTSKKRPKIP----SLPSMHMYKNPAALIGLARKIKSLPAEEDVSVVLNKW 212
Query: 207 APFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKI 266
A FLQKGSLS+TI+ELGHMGL DRAL+TFCWVQ QP L+PDDR LA+T+EVLARNHELK+
Sbjct: 213 ANFLQKGSLSMTIRELGHMGLPDRALQTFCWVQRQPHLFPDDRTLATTIEVLARNHELKM 272
Query: 267 PFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIGK 326
PF+L++F LASR V+EAM+RGF KGG L+LAWK+++ AK+GKRMLDPSVY KLILE+ K
Sbjct: 273 PFDLEKFVALASRNVIEAMVRGFAKGGSLNLAWKVVLIAKDGKRMLDPSVYAKLILELAK 332
Query: 327 NPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPSV 386
NPDK +L LL+ELG+RE LNL+QQD +AI+KV TRLGKFE E LY+W+ +SG +PSV
Sbjct: 333 NPDKYVLAEVLLNELGEREELNLSQQDCTAIMKVCTRLGKFETVEGLYNWFKQSGRDPSV 392
Query: 387 VMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFAK 446
VMYT L+H+RY +KYREAL+VVWEMEA+N FDLPAY +V+KLFVAL DLSRAVRYF++
Sbjct: 393 VMYTTLIHSRYLVKKYREALAVVWEMEASNCLFDLPAYRMVIKLFVALNDLSRAVRYFSR 452
Query: 447 LKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
LKEAGF+PTY IYR+LI IY+ +GRLAKCK++YKEAE AG+ +DK S L Q +R
Sbjct: 453 LKEAGFSPTYDIYRDLIKIYMVSGRLAKCKDVYKEAEMAGFKLDKGTMSQLQQLER 493
BLAST of CmoCh12G006210 vs. NCBI nr
Match:
gi|566173530|ref|XP_002307797.2| (hypothetical protein POPTR_0005s27370g [Populus trichocarpa])
HSP 1 Score: 584.3 bits (1505), Expect = 2.0e-163
Identity = 303/477 (63.52%), Postives = 374/477 (78.41%), Query Frame = 1
Query: 27 VAHFQTN-SRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSEKIGLP 86
+AH T R+ PKN+ YPRR+KLPPD GVN FLKK PQ D+ + L
Sbjct: 1 MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKK----PQTDS-----VQDHSDDLT 60
Query: 87 EEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERPLPLPL 146
EEE +E E N+ ++VW+SEEIEAI+SLFRGRIPQKPGKL RERPLPLP+
Sbjct: 61 EEEEEEEIEV----------NNGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPV 120
Query: 147 PHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLKPEENVSKVLNR 206
P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS VL+
Sbjct: 121 PYKLRPLGLPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDN 180
Query: 207 WAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELK 266
+ +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+QPRL+PDDRVLASTVEVLARNH+LK
Sbjct: 181 CSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLK 240
Query: 267 IPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKLILEIG 326
+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSVY K+ILE+G
Sbjct: 241 VPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELG 300
Query: 327 KNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVESGHEPS 386
KNPDK++L ALLDEL +RE LNL+QQD +A++KV +LGKFE E L++W+ +SGHEPS
Sbjct: 301 KNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPS 360
Query: 387 VVMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRAVRYFA 446
VVMYT L+H+RYSE KYREAL+VVWEME ++ FDL AY VV+KLFVAL DL RAVRYF+
Sbjct: 361 VVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFS 420
Query: 447 KLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ KR
Sbjct: 421 KLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458
BLAST of CmoCh12G006210 vs. NCBI nr
Match:
gi|743895877|ref|XP_011041213.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Populus euphratica])
HSP 1 Score: 576.6 bits (1485), Expect = 4.1e-161
Identity = 300/481 (62.37%), Postives = 375/481 (77.96%), Query Frame = 1
Query: 22 SCQIPVAHFQTN-SRRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSGPQPDTSFPDLISSE 81
S I +AH T R+ PKN+ YPRR+KLPPD GVN FLKK PQ D+ +
Sbjct: 28 SSMILMAHCSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKK----PQIDS-----VQDH 87
Query: 82 KIGLPEEELDEIEETAADNYFANDDNDSDVVWDSEEIEAITSLFRGRIPQKPGKLNRERP 141
L +EE +EIE N+ ++VW+SEE+EAI+SLFRGRIPQKPGKL RERP
Sbjct: 88 SDDLTKEEEEEIEV-----------NNGEIVWESEELEAISSLFRGRIPQKPGKLGRERP 147
Query: 142 LPLPLPHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLKPEENVS 201
LPLP+P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS
Sbjct: 148 LPLPVPYKLRPLGLPAPKKHVNKQVSLSRASISNQIYKNPSFLIGLAKEIKRLSPDQDVS 207
Query: 202 KVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLAR 261
VL++ + +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+Q RL+PDDRVLASTVEVLAR
Sbjct: 208 VVLDKCSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQSRLFPDDRVLASTVEVLAR 267
Query: 262 NHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVYVKL 321
N +LK+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSVY K+
Sbjct: 268 NDDLKVPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKI 327
Query: 322 ILEIGKNPDKNMLVLALLDELGQREALNLNQQDTSAIIKVSTRLGKFEIAERLYSWYVES 381
ILE+GKNPDK++L ALLDEL +RE LNL+QQD +A++KV +LGKFE E L++W+ +S
Sbjct: 328 ILELGKNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQS 387
Query: 382 GHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANSPFDLPAYSVVMKLFVALGDLSRA 441
GH+PSVVMYT L+H+RYSE KYREAL+VVWEME ++ FDL AY VV+KLFVAL DL RA
Sbjct: 388 GHDPSVVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRA 447
Query: 442 VRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQA 501
VRYF+KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ
Sbjct: 448 VRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQL 488
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP142_ARATH | 6.6e-135 | 55.27 | Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN... | [more] |
| PP194_ARATH | 2.3e-10 | 23.30 | Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... | [more] |
| PP397_ARATH | 3.3e-09 | 28.69 | Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN... | [more] |
| PPR49_ARATH | 3.3e-09 | 23.02 | Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN... | [more] |
| PP408_ARATH | 9.6e-09 | 27.44 | Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LVM0_CUCSA | 3.7e-225 | 80.24 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1 | [more] |
| B9H5I8_POPTR | 1.4e-163 | 63.52 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2 | [more] |
| A0A067KL02_JATCU | 7.8e-159 | 59.84 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1 | [more] |
| B9R8P4_RICCO | 1.0e-158 | 62.50 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| A0A061FD99_THECC | 1.2e-156 | 58.12 | Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0344... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G01860.1 | 3.7e-136 | 55.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G39230.1 | 1.3e-11 | 23.30 | LATERAL ORGAN JUNCTION | [more] |
| AT5G25630.2 | 1.9e-10 | 28.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G18900.3 | 1.9e-10 | 23.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G39980.1 | 5.4e-10 | 27.44 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
