BLAST of CmaCh12G006850 vs. Swiss-Prot
Match:
PP142_ARATH (Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN=EMB975 PE=2 SV=1)
HSP 1 Score: 489.6 bits (1259), Expect = 4.1e-137
Identity = 263/472 (55.72%), Postives = 349/472 (73.94%), Query Frame = 1
Query: 33 NSKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSEKIGLPEEELDEL 92
N ++ KNL PRRTKLPPD GVN FL+K +P + +++ +++
Sbjct: 36 NHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDEQV 95
Query: 93 EETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPP 152
+E+ NDD+D+ +VW+PEEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLRP
Sbjct: 96 QESV------NDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLRPL 155
Query: 153 GLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDLQPEE-NVSKVLNRWAPFL 212
GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W FL
Sbjct: 156 GLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVSFL 215
Query: 213 QKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNL 272
+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+ L
Sbjct: 216 RKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL---L 275
Query: 273 DEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIGKNPDK 332
LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SV+VK+ILEI KNPDK
Sbjct: 276 KFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNPDK 335
Query: 333 NMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYT 392
LV+ALL+EL +RE L LSQQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVMYT
Sbjct: 336 YHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVMYT 395
Query: 393 ALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEA 452
++H+RYSE+KYREA+SVVWEME +NC DLPAY VVIKLFVAL DL RA+RY++KLKEA
Sbjct: 396 TMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLKEA 455
Query: 453 GFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
GF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 456 GFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmaCh12G006850 vs. Swiss-Prot
Match:
PP194_ARATH (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.6e-11
Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 336 LLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNR 395
+L L + + ++S ++II ++G + A + Y E+G P+VV +T+L++
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 396 YSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTY 455
+ AL + EM++ DLPAY +I F D+ A F++L E G P
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 456 CIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMD 490
+Y +LI+ + G++ ++YK+ N G D
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
BLAST of CmaCh12G006850 vs. Swiss-Prot
Match:
PP408_ARATH (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.5e-09
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1
Query: 334 LALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVH 393
LALLD + + S + +++ R +F+IA L+ + P Y+ L+
Sbjct: 139 LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLIT 198
Query: 394 NRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTP 453
+ E + ALS + +ME DL YS +I+L L D S+A+ F++LK +G TP
Sbjct: 199 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 454 TYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLL 498
Y ++I +Y A + + + KE AG + + S LL
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
BLAST of CmaCh12G006850 vs. Swiss-Prot
Match:
PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 1.9e-09
Identity = 63/256 (24.61%), Postives = 120/256 (46.88%), Query Frame = 1
Query: 251 ASTVEVLARNHELKIPFNL-DEFTKLA---SRGVLEAMMRGFIKGGRLSLA-WKLLVAAK 310
AS ++ L + L+ NL E +K + V A++ G I+ RL A + L K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 311 NGKRMLDPSVHVKL--ILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRL 370
NG R S ++ + + + GK + + V +L+ G + L + S ++ R
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDL----KTYSILLCGLCRD 552
Query: 371 GKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAY 430
K ++A +L+ +++SG E V+M+ L+H S K +A++V+ ME NC +L Y
Sbjct: 553 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 612
Query: 431 SVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAEN 490
+ +++ F +GD +RA + + + G P Y ++ ++ E + +A N
Sbjct: 613 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 672
Query: 491 AGYVMDKQITSMLLQA 500
G ++L++A
Sbjct: 673 HGIFPTVYTWNILVRA 683
BLAST of CmaCh12G006850 vs. Swiss-Prot
Match:
PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2)
HSP 1 Score: 65.1 bits (157), Expect = 2.5e-09
Identity = 36/122 (29.51%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 356 IIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 CPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
D ++ VI F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
BLAST of CmaCh12G006850 vs. TrEMBL
Match:
A0A0A0LVM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1)
HSP 1 Score: 785.0 bits (2026), Expect = 5.3e-224
Identity = 400/501 (79.84%), Postives = 437/501 (87.23%), Query Frame = 1
Query: 1 MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDS+ S T+VSSILVK NGGI CQ M HF NS+RRPPKNLL PRR KLPP+P VNQF
Sbjct: 1 MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
Query: 61 KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120
+TS P P + DLI S+ DE EE A +Y D+D+VWD +EIEAI
Sbjct: 61 NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
Query: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+ NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 HRLFPDDRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360
LVAAK GKRMLDPSV+VKLILE+GKNPDKNMLVL LL+ELGQREAL L+QQD + I+KV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
Query: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
TRLGKFEIAEKLYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ NCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFMMDKQITSMLLQAKR 489
BLAST of CmaCh12G006850 vs. TrEMBL
Match:
B9H5I8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2)
HSP 1 Score: 588.6 bits (1516), Expect = 7.3e-165
Identity = 307/477 (64.36%), Postives = 375/477 (78.62%), Query Frame = 1
Query: 27 MAHFLTN-SKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSEKIGLP 86
MAH T R+ PKN+ YPRR+KLPPD GVN FLKK +D D S DL
Sbjct: 1 MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKKPQTDSVQDHS-DDLTE------- 60
Query: 87 EEELDELEETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERPLPLPL 146
EEE +E+E N+ +IVW+ EEIEAI+SLFRGRIPQKPGKL RERPLPLP+
Sbjct: 61 EEEEEEIEV-----------NNGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPV 120
Query: 147 PHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLQPEENVSKVLNR 206
P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS VL+
Sbjct: 121 PYKLRPLGLPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDN 180
Query: 207 WAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELK 266
+ +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+QPRL+PDDRVLASTVEVLARNH+LK
Sbjct: 181 CSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLK 240
Query: 267 IPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIG 326
+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSV+ K+ILE+G
Sbjct: 241 VPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELG 300
Query: 327 KNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPS 386
KNPDK++L ALLDEL +RE LNLSQQD +A++KV +LGKFE E L++W+ +SGHEPS
Sbjct: 301 KNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPS 360
Query: 387 VVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFA 446
VVMYT L+H+RYSE KYREAL+VVWEME ++C FDL AY VVIKLFVAL DL RAVRYF+
Sbjct: 361 VVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFS 420
Query: 447 KLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ KR
Sbjct: 421 KLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458
BLAST of CmaCh12G006850 vs. TrEMBL
Match:
A0A067KL02_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1)
HSP 1 Score: 568.9 bits (1465), Expect = 6.0e-159
Identity = 302/503 (60.04%), Postives = 379/503 (75.35%), Query Frame = 1
Query: 3 SLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFLKK 62
SL+S + S L K+ GI+ R+ PKNL PRR+KLPPD GVN FLKK
Sbjct: 9 SLYSISPWGSKLSKKRSGITITTMTYSKKKTHYRKLPKNLRSPRRSKLPPDFGVNLFLKK 68
Query: 63 RTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAITS 122
+S D S + I + L EEE +E E+ DIVW+ +EIEAI+S
Sbjct: 69 PSSGV--DNSQMNSIVDDDGDLTEEEGEEQEQLG------------DIVWESDEIEAISS 128
Query: 123 LFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTA----VSSRALMSKQVYKR 182
LF+GRIPQKPGKLNRERPLP PLP+KLRP GLP PK R + A SSRA +QVYK
Sbjct: 129 LFQGRIPQKPGKLNRERPLPHPLPYKLRPLGLPTPKRRMKNASPLVYSSRASTCEQVYKN 188
Query: 183 PDFLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQ 242
P FLI LA+ I+ L P+++ S +L+ + FL+KGSLSLTI+ELGHMGL +RAL+TFCW Q
Sbjct: 189 PRFLISLAKQIKCLNPDQDASFILDDYTRFLRKGSLSLTIRELGHMGLPERALQTFCWAQ 248
Query: 243 EQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAW 302
+QP+L+PDDR+LASTVE+LAR+ +LK+ F+ +FT LASRGV+EAM+RGFI+G L LAW
Sbjct: 249 KQPQLFPDDRILASTVELLARSQDLKVSFDFQKFTGLASRGVIEAMVRGFIRGRSLHLAW 308
Query: 303 KLLVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIK 362
+LL+AAK+ RMLDPSV+ KLILE+GKNPDK+++V LLD+L +RE L+LS QD +AI+K
Sbjct: 309 ELLLAAKHDNRMLDPSVYAKLILELGKNPDKHIIVSQLLDDLSEREDLSLSHQDCTAIMK 368
Query: 363 VSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPF 422
V RL KFE+ E L+ W+ +SG E SVVMYT L+H+RYSE+KYREAL+VVWEME +NC F
Sbjct: 369 VCIRLKKFELVETLFGWFKQSGRELSVVMYTTLIHSRYSEKKYREALAVVWEMEGSNCLF 428
Query: 423 DLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIY 482
DLPAY VVIKLFVAL DLSRA RYF+KLKEAGF+PTY IY++LIT+Y+A+GRLAKCKEI
Sbjct: 429 DLPAYRVVIKLFVALNDLSRAARYFSKLKEAGFSPTYDIYKDLITVYMASGRLAKCKEIR 488
Query: 483 KEAENAGYVMDKQITSMLLQAKR 502
+E E AG+ +DKQ+TS LLQ +R
Sbjct: 489 REVEMAGFKLDKQMTSALLQLER 497
BLAST of CmaCh12G006850 vs. TrEMBL
Match:
A0A061FD99_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_034404 PE=4 SV=1)
HSP 1 Score: 567.4 bits (1461), Expect = 1.7e-158
Identity = 300/511 (58.71%), Postives = 386/511 (75.54%), Query Frame = 1
Query: 1 MDSLFSTTAVSSIL-VKRNGGISCQIP-MAHFLTNS--KRRPPKNLLYPRRTKLPPDPGV 60
MD + S+ ++ ++ +KR S + MAH T ++ P KN YPRRTKLPPD GV
Sbjct: 19 MDCMVSSFSLHPVIPLKRKVVKSISVTSMAHPNTRICYRKLPKKNHRYPRRTKLPPDFGV 78
Query: 61 NQFLKK-RT-SDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDP 120
N FL++ RT +D PDT D IPS EE + EE +D + +VW+
Sbjct: 79 NLFLQEPRTGTDTAPDTQQMDSIPSRSNEEEEESEGKEEEV--------EDQGNYVVWES 138
Query: 121 EEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTA----VSSRAL 180
+E+EAI+SLF+GRIPQKPGKL R+RPLPLPLP+KLRP G P PK + +SSRA
Sbjct: 139 DEVEAISSLFQGRIPQKPGKLGRKRPLPLPLPYKLRPLGSPTPKKHVKLTSPGVISSRAS 198
Query: 181 MSKQVYKRPDFLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRA 240
+SK++YK P FLIGLAR I+DL +E+VS VL++WA FL+KGSLS+TI+ELGHMGL RA
Sbjct: 199 VSKRLYKNPSFLIGLAREIKDLDSDEDVSAVLDKWARFLRKGSLSMTIRELGHMGLPQRA 258
Query: 241 LKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIK 300
L+TFCW Q+QP+L+PDDRVL STVEVLARN ELK+P NL++F L++R ++EAM++GFIK
Sbjct: 259 LQTFCWAQKQPQLFPDDRVLTSTVEVLARNRELKLPVNLEKFASLSNRSLIEAMVKGFIK 318
Query: 301 GGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQ 360
GG L+LAWKLL AK KRML PS++ KLILE+GKNPDK+ LV LLD+LG+RE LNLSQ
Sbjct: 319 GGNLNLAWKLLSVAKQSKRMLHPSIYAKLILELGKNPDKHTLVEDLLDDLGERENLNLSQ 378
Query: 361 QDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWE 420
QD +AI+K+ RLGKFE E L++W+ +SG + +VVMYT L+H+RYSE+KYREAL++VWE
Sbjct: 379 QDCTAIMKICIRLGKFETVESLFNWFKQSGRDTTVVMYTTLLHSRYSEKKYREALALVWE 438
Query: 421 MEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGR 480
MEA+ C DLPAY V IK+FVAL DLSRAVRYF+KLKEAGF+PTY IYR+LI+IY+ +GR
Sbjct: 439 MEASECLLDLPAYRVAIKVFVALNDLSRAVRYFSKLKEAGFSPTYDIYRDLISIYMVSGR 498
Query: 481 LAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
LAKCKE+ KEAE AG+ +DK + L + ++
Sbjct: 499 LAKCKEVCKEAEMAGFSLDKHTLAQLSRLEK 521
BLAST of CmaCh12G006850 vs. TrEMBL
Match:
M5WPF2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005053mg PE=4 SV=1)
HSP 1 Score: 564.3 bits (1453), Expect = 1.5e-157
Identity = 289/481 (60.08%), Postives = 358/481 (74.43%), Query Frame = 1
Query: 18 NGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLI 77
NG +S MA ++++RR P NL YP+RTKLPPD G+N L+ T
Sbjct: 24 NGRVSL---MARSNSSTRRRLPSNLRYPQRTKLPPDFGINHLLRNTTE------------ 83
Query: 78 PSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNR 137
PS + E E +E + DI W+ +EIEAI+SLF+GRIPQKPGKL+R
Sbjct: 84 PSSQTEFKEAEAEE--------------DGEDIAWEADEIEAISSLFQGRIPQKPGKLDR 143
Query: 138 ERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLQPEEN 197
+RPLPLPLP+KLRP GLP PK + A + QVYK P+ L+GLAR IR L E+
Sbjct: 144 QRPLPLPLPYKLRPLGLPRPKKHVKMAP-----ICDQVYKNPNALVGLAREIRSLGVVED 203
Query: 198 VSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVL 257
V +LN+W PFL+KGSLS+TI+ELGHMGL DRAL+TF W Q+QP L+PDDR+LAS VEVL
Sbjct: 204 VGLILNKWVPFLRKGSLSMTIRELGHMGLPDRALQTFSWAQKQPHLFPDDRLLASAVEVL 263
Query: 258 ARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHV 317
AR HELK+PFNLD+FT LASRGV+EAM RGFIKGG L LAWKL+ AKN R L+ SV+
Sbjct: 264 ARYHELKLPFNLDKFTSLASRGVIEAMARGFIKGGSLHLAWKLIFIAKNSGRKLNTSVYA 323
Query: 318 KLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYV 377
KLILE+GKNPDK+ L+ LLDELG+RE LNL+QQD +AI+KV RLGKFE+ E +Y W+
Sbjct: 324 KLILELGKNPDKHRLIGTLLDELGKREDLNLTQQDCTAIMKVCIRLGKFEVVESVYDWFR 383
Query: 378 ESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLS 437
+SGH+PSVVMYT L+H+RYSE+KYREAL+VVWEMEA+NCPFD PAY V IKLFVAL DL
Sbjct: 384 QSGHDPSVVMYTTLIHSRYSEKKYREALAVVWEMEASNCPFDFPAYRVAIKLFVALNDLP 443
Query: 438 RAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLL 497
RAVRY +KLKEAGF+PTY +YR+LI +Y+ +GRLAKC+++ KE + AG+ +DK+ S LL
Sbjct: 444 RAVRYISKLKEAGFSPTYDVYRDLIKMYMVSGRLAKCRDVCKEVDIAGFKLDKETMSQLL 470
Query: 498 Q 499
Q
Sbjct: 504 Q 470
BLAST of CmaCh12G006850 vs. TAIR10
Match:
AT2G01860.1 (AT2G01860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 489.6 bits (1259), Expect = 2.3e-138
Identity = 263/472 (55.72%), Postives = 349/472 (73.94%), Query Frame = 1
Query: 33 NSKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSEKIGLPEEELDEL 92
N ++ KNL PRRTKLPPD GVN FL+K +P + +++ +++
Sbjct: 36 NHSKKLTKNLRNPRRTKLPPDFGVNLFLRKPKIEPL---------------VIDDDDEQV 95
Query: 93 EETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPP 152
+E+ NDD+D+ +VW+PEEIEAI+SLF+ RIPQKP K +R RPLPLP PHKLRP
Sbjct: 96 QESV------NDDDDA-VVWEPEEIEAISSLFQKRIPQKPDKPSRVRPLPLPQPHKLRPL 155
Query: 153 GLPNPKIRPRTAVSSRAL--MSKQVYKRPDFLIGLARAIRDLQPEE-NVSKVLNRWAPFL 212
GLP PK + + S AL +SKQVYK P FLIGLAR I+ L + +VS VLN+W FL
Sbjct: 156 GLPTPK---KNIIRSPALSSVSKQVYKDPSFLIGLAREIKSLPSSDADVSLVLNKWVSFL 215
Query: 213 QKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNL 272
+KGSLS TI+ELGHMGL +RAL+T+ W ++ L PD+R+LAST++VLA++HELK+ L
Sbjct: 216 RKGSLSTTIRELGHMGLPERALQTYHWAEKHSHLVPDNRILASTIQVLAKHHELKL---L 275
Query: 273 DEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIGKNPDK 332
LAS+ V+EAM++G I+GG L+LA KL++ +K+ R+LD SV+VK+ILEI KNPDK
Sbjct: 276 KFDNSLASKNVIEAMIKGCIEGGWLNLARKLILISKSNNRILDSSVYVKMILEIAKNPDK 335
Query: 333 NMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYT 392
LV+ALL+EL +RE L LSQQD ++I+K+ +LG+FE+ E L+ W+ S EPSVVMYT
Sbjct: 336 YHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESLFDWFKASNREPSVVMYT 395
Query: 393 ALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEA 452
++H+RYSE+KYREA+SVVWEME +NC DLPAY VVIKLFVAL DL RA+RY++KLKEA
Sbjct: 396 TMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMRYYSKLKEA 455
Query: 453 GFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
GF+PTY IYR++I++Y A+GRL KCKEI KE E+AG +DK + LLQ ++
Sbjct: 456 GFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
BLAST of CmaCh12G006850 vs. TAIR10
Match:
AT2G39230.1 (AT2G39230.1 LATERAL ORGAN JUNCTION)
HSP 1 Score: 72.4 bits (176), Expect = 8.9e-13
Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 1
Query: 336 LLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNR 395
+L L + + ++S ++II ++G + A + Y E+G P+VV +T+L++
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 396 YSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTY 455
+ AL + EM++ DLPAY +I F D+ A F++L E G P
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 456 CIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMD 490
+Y +LI+ + G++ ++YK+ N G D
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
BLAST of CmaCh12G006850 vs. TAIR10
Match:
AT5G39980.1 (AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 65.9 bits (159), Expect = 8.3e-11
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 1
Query: 334 LALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVH 393
LALLD + + S + +++ R +F+IA L+ + P Y+ L+
Sbjct: 139 LALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLIT 198
Query: 394 NRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTP 453
+ E + ALS + +ME DL YS +I+L L D S+A+ F++LK +G TP
Sbjct: 199 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 454 TYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLL 498
Y ++I +Y A + + + KE AG + + S LL
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
BLAST of CmaCh12G006850 vs. TAIR10
Match:
AT3G09060.1 (AT3G09060.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 65.5 bits (158), Expect = 1.1e-10
Identity = 63/256 (24.61%), Postives = 120/256 (46.88%), Query Frame = 1
Query: 251 ASTVEVLARNHELKIPFNL-DEFTKLA---SRGVLEAMMRGFIKGGRLSLA-WKLLVAAK 310
AS ++ L + L+ NL E +K + V A++ G I+ RL A + L K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 311 NGKRMLDPSVHVKL--ILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRL 370
NG R S ++ + + + GK + + V +L+ G + L + S ++ R
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDL----KTYSILLCGLCRD 552
Query: 371 GKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAY 430
K ++A +L+ +++SG E V+M+ L+H S K +A++V+ ME NC +L Y
Sbjct: 553 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 612
Query: 431 SVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAEN 490
+ +++ F +GD +RA + + + G P Y ++ ++ E + +A N
Sbjct: 613 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 672
Query: 491 AGYVMDKQITSMLLQA 500
G ++L++A
Sbjct: 673 HGIFPTVYTWNILVRA 683
BLAST of CmaCh12G006850 vs. TAIR10
Match:
AT5G25630.2 (AT5G25630.2 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 65.1 bits (157), Expect = 1.4e-10
Identity = 36/122 (29.51%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 356 IIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAAN 415
++ V G+ A+ ++ E+GH PS++ YT L+ +++Y S+V E+E +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 416 CPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCK 475
D ++ VI F G++ AV+ K+KE G PT Y LI Y AG+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 476 EI 478
E+
Sbjct: 171 EL 172
BLAST of CmaCh12G006850 vs. NCBI nr
Match:
gi|659071841|ref|XP_008462173.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis melo])
HSP 1 Score: 789.3 bits (2037), Expect = 4.0e-225
Identity = 404/501 (80.64%), Postives = 442/501 (88.22%), Query Frame = 1
Query: 1 MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60
M S+ S T+VSSILVK NGGI CQI M HF NS+RRPPKNLL PRR KLPPDP VNQFL
Sbjct: 1 MHSIVSATSVSSILVKGNGGIGCQITMVHFKANSRRRPPKNLLCPRRAKLPPDPAVNQFL 60
Query: 61 KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120
+TS P P S+ DLI S+ DE EE A +Y D+D+VWD +EIEAI
Sbjct: 61 NNKTSAPSP--SFTDLISSKIFQ------DEHEEIHAYDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SK+VYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTTVSSRALLSKKVYKRPD 180
Query: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLARAIRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRALKTFCWVQEQ
Sbjct: 181 FLIGLARAIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALKTFCWVQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+P NL+EFTKLASRGVLEAMMRGFIKGG L+LAWKL
Sbjct: 241 RRLFPDDRVLASTVEVLSRNHELKVPVNLEEFTKLASRGVLEAMMRGFIKGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360
LVAAK GKRMLDPSV+VKLILE+GKNPDKN+LVL LL+ELGQREAL L+QQD++ IIKV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNVLVLTLLEELGQREALKLNQQDSTTIIKVC 360
Query: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
TRL KFEIAEKLY WYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ANCPFDL
Sbjct: 361 TRLRKFEIAEKLYCWYVESGHEPSMVMYTALVHSRYSDRKYREALSLVWEMESANCPFDL 420
Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAY+VVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAK KEIYKE
Sbjct: 421 PAYNVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYDVYRNMITIYLVSGRLAKSKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFIMDKQITSMLLQAKR 489
BLAST of CmaCh12G006850 vs. NCBI nr
Match:
gi|449443604|ref|XP_004139567.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Cucumis sativus])
HSP 1 Score: 785.0 bits (2026), Expect = 7.6e-224
Identity = 400/501 (79.84%), Postives = 437/501 (87.23%), Query Frame = 1
Query: 1 MDSLFSTTAVSSILVKRNGGISCQIPMAHFLTNSKRRPPKNLLYPRRTKLPPDPGVNQFL 60
MDS+ S T+VSSILVK NGGI CQ M HF NS+RRPPKNLL PRR KLPP+P VNQF
Sbjct: 1 MDSIVSATSVSSILVKGNGGIGCQNTMVHFKANSRRRPPKNLLCPRRAKLPPNPAVNQFF 60
Query: 61 KKRTSDPHPDTSYPDLIPSEKIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAI 120
+TS P P + DLI S+ DE EE A +Y D+D+VWD +EIEAI
Sbjct: 61 NNKTSAPSPP--FTDLISSKIFQ------DEHEEIHAHDY----TKDTDVVWDSDEIEAI 120
Query: 121 TSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPGLPNPKIRPRTAVSSRALMSKQVYKRPD 180
+SLF+GRIPQKPGKLNRERPLPLPLPHKLRPP LPNPKIRP T VSSRAL+SKQVYKRPD
Sbjct: 121 SSLFQGRIPQKPGKLNRERPLPLPLPHKLRPPRLPNPKIRPTTVVSSRALLSKQVYKRPD 180
Query: 181 FLIGLARAIRDLQPEENVSKVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQ 240
FLIGLAR IRDL PEENVSKVLNRW PFLQKGSLSLTIKELGHMGL DRAL TFCW QEQ
Sbjct: 181 FLIGLAREIRDLSPEENVSKVLNRWGPFLQKGSLSLTIKELGHMGLPDRALNTFCWAQEQ 240
Query: 241 PRLYPDDRVLASTVEVLARNHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKL 300
RL+PDDRVLASTVEVL+RNHELK+ NL+EFTKLASRGVLEAMMRGFI+GG L+LAWKL
Sbjct: 241 HRLFPDDRVLASTVEVLSRNHELKVAVNLEEFTKLASRGVLEAMMRGFIRGGSLNLAWKL 300
Query: 301 LVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVS 360
LVAAK GKRMLDPSV+VKLILE+GKNPDKNMLVL LL+ELGQREAL L+QQD + I+KV
Sbjct: 301 LVAAKKGKRMLDPSVYVKLILELGKNPDKNMLVLTLLEELGQREALKLNQQDCTTIVKVC 360
Query: 361 TRLGKFEIAEKLYSWYVESGHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDL 420
TRLGKFEIAEKLYSWYVESGHEPS+VMYTALVH+RYS+RKYREALS+VWEME+ NCPFDL
Sbjct: 361 TRLGKFEIAEKLYSWYVESGHEPSIVMYTALVHSRYSDRKYREALSLVWEMESGNCPFDL 420
Query: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKE 480
PAYSVVIKLFVALGDLSRAVRYFAKLKEAGF+PTY +YRN+ITIYL +GRLAKCKEIYKE
Sbjct: 421 PAYSVVIKLFVALGDLSRAVRYFAKLKEAGFSPTYNVYRNMITIYLVSGRLAKCKEIYKE 480
Query: 481 AENAGYVMDKQITSMLLQAKR 502
AENAG++MDKQITSMLLQAKR
Sbjct: 481 AENAGFMMDKQITSMLLQAKR 489
BLAST of CmaCh12G006850 vs. NCBI nr
Match:
gi|1009170746|ref|XP_015866362.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Ziziphus jujuba])
HSP 1 Score: 592.8 bits (1527), Expect = 5.6e-166
Identity = 307/468 (65.60%), Postives = 368/468 (78.63%), Query Frame = 1
Query: 35 KRRPPKNLLYP-RRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSEKIGLPEEELDELE 94
+RR PKNL YP RRTKLPPD GVN FLK T+ P P+ K EEE +E E
Sbjct: 39 RRRLPKNLRYPPRRTKLPPDLGVNLFLK---------TTKPVNDPTMKTQEEEEEEEEEE 98
Query: 95 ETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERPLPLPLPHKLRPPG 154
E + D++ D VWD +EIEAITSLF+GRIPQKPGKLNRERPLPLPLP+KLRP G
Sbjct: 99 EGEEQQHQPEDNDHDDFVWDSDEIEAITSLFQGRIPQKPGKLNRERPLPLPLPYKLRPLG 158
Query: 155 LPNPKIRPRTAVSSRALMSKQVYKRPDFLIGLARAIRDLQPEENVSKVLNRWAPFLQKGS 214
LP K RP+ +L S +YK P LIGLAR I+ L EE+VS VLN+WA FLQKGS
Sbjct: 159 LPTSKKRPKIP----SLPSMHMYKNPAALIGLARKIKSLPAEEDVSVVLNKWANFLQKGS 218
Query: 215 LSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELKIPFNLDEFT 274
LS+TI+ELGHMGL DRAL+TFCWVQ QP L+PDDR LA+T+EVLARNHELK+PF+L++F
Sbjct: 219 LSMTIRELGHMGLPDRALQTFCWVQRQPHLFPDDRTLATTIEVLARNHELKMPFDLEKFV 278
Query: 275 KLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIGKNPDKNMLV 334
LASR V+EAM+RGF KGG L+LAWK+++ AK+GKRMLDPSV+ KLILE+ KNPDK +L
Sbjct: 279 ALASRNVIEAMVRGFAKGGSLNLAWKVVLIAKDGKRMLDPSVYAKLILELAKNPDKYVLA 338
Query: 335 LALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPSVVMYTALVH 394
LL+ELG+RE LNLSQQD +AI+KV TRLGKFE E LY+W+ +SG +PSVVMYT L+H
Sbjct: 339 EVLLNELGEREELNLSQQDCTAIMKVCTRLGKFETVEGLYNWFKQSGRDPSVVMYTTLIH 398
Query: 395 NRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFAKLKEAGFTP 454
+RY +KYREAL+VVWEMEA+NC FDLPAY +VIKLFVAL DLSRAVRYF++LKEAGF+P
Sbjct: 399 SRYLVKKYREALAVVWEMEASNCLFDLPAYRMVIKLFVALNDLSRAVRYFSRLKEAGFSP 458
Query: 455 TYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
TY IYR+LI IY+ +GRLAKCK++YKEAE AG+ +DK S L Q +R
Sbjct: 459 TYDIYRDLIKIYMVSGRLAKCKDVYKEAEMAGFKLDKGTMSQLQQLER 493
BLAST of CmaCh12G006850 vs. NCBI nr
Match:
gi|566173530|ref|XP_002307797.2| (hypothetical protein POPTR_0005s27370g [Populus trichocarpa])
HSP 1 Score: 588.6 bits (1516), Expect = 1.0e-164
Identity = 307/477 (64.36%), Postives = 375/477 (78.62%), Query Frame = 1
Query: 27 MAHFLTN-SKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSEKIGLP 86
MAH T R+ PKN+ YPRR+KLPPD GVN FLKK +D D S DL
Sbjct: 1 MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKKPQTDSVQDHS-DDLTE------- 60
Query: 87 EEELDELEETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERPLPLPL 146
EEE +E+E N+ +IVW+ EEIEAI+SLFRGRIPQKPGKL RERPLPLP+
Sbjct: 61 EEEEEEIEV-----------NNGEIVWESEEIEAISSLFRGRIPQKPGKLGRERPLPLPV 120
Query: 147 PHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLQPEENVSKVLNR 206
P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS VL+
Sbjct: 121 PYKLRPLGLPAPKKHVNKQVSLSRASISSQIYKNPSFLIGLAKEIKRLSPDQDVSVVLDN 180
Query: 207 WAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLARNHELK 266
+ +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+QPRL+PDDRVLASTVEVLARNH+LK
Sbjct: 181 CSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLFPDDRVLASTVEVLARNHDLK 240
Query: 267 IPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKLILEIG 326
+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSV+ K+ILE+G
Sbjct: 241 VPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKIILELG 300
Query: 327 KNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVESGHEPS 386
KNPDK++L ALLDEL +RE LNLSQQD +A++KV +LGKFE E L++W+ +SGHEPS
Sbjct: 301 KNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQSGHEPS 360
Query: 387 VVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRAVRYFA 446
VVMYT L+H+RYSE KYREAL+VVWEME ++C FDL AY VVIKLFVAL DL RAVRYF+
Sbjct: 361 VVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRAVRYFS 420
Query: 447 KLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQAKR 502
KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ KR
Sbjct: 421 KLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQLKR 458
BLAST of CmaCh12G006850 vs. NCBI nr
Match:
gi|743895877|ref|XP_011041213.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Populus euphratica])
HSP 1 Score: 578.9 bits (1491), Expect = 8.3e-162
Identity = 302/481 (62.79%), Postives = 373/481 (77.55%), Query Frame = 1
Query: 22 SCQIPMAHFLTN-SKRRPPKNLLYPRRTKLPPDPGVNQFLKKRTSDPHPDTSYPDLIPSE 81
S I MAH T R+ PKN+ YPRR+KLPPD GVN FLKK D D S
Sbjct: 28 SSMILMAHCSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKKPQIDSVQDHSDD------ 87
Query: 82 KIGLPEEELDELEETAADNYFANDDNDSDIVWDPEEIEAITSLFRGRIPQKPGKLNRERP 141
L +EE +E+E N+ +IVW+ EE+EAI+SLFRGRIPQKPGKL RERP
Sbjct: 88 ---LTKEEEEEIEV-----------NNGEIVWESEELEAISSLFRGRIPQKPGKLGRERP 147
Query: 142 LPLPLPHKLRPPGLPNPKIRPRTAVS-SRALMSKQVYKRPDFLIGLARAIRDLQPEENVS 201
LPLP+P+KLRP GLP PK VS SRA +S Q+YK P FLIGLA+ I+ L P+++VS
Sbjct: 148 LPLPVPYKLRPLGLPAPKKHVNKQVSLSRASISNQIYKNPSFLIGLAKEIKRLSPDQDVS 207
Query: 202 KVLNRWAPFLQKGSLSLTIKELGHMGLADRALKTFCWVQEQPRLYPDDRVLASTVEVLAR 261
VL++ + +L KGSLSLTI+ELGH+GL +RAL+TFCWVQ+Q RL+PDDRVLASTVEVLAR
Sbjct: 208 VVLDKCSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQSRLFPDDRVLASTVEVLAR 267
Query: 262 NHELKIPFNLDEFTKLASRGVLEAMMRGFIKGGRLSLAWKLLVAAKNGKRMLDPSVHVKL 321
N +LK+PFNL++FT LASR V+EAM++G I+GG L LAWKL+ AK+GKRMLDPSV+ K+
Sbjct: 268 NDDLKVPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLAWKLISVAKDGKRMLDPSVYAKI 327
Query: 322 ILEIGKNPDKNMLVLALLDELGQREALNLSQQDTSAIIKVSTRLGKFEIAEKLYSWYVES 381
ILE+GKNPDK++L ALLDEL +RE LNLSQQD +A++KV +LGKFE E L++W+ +S
Sbjct: 328 ILELGKNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLGKFEAVESLFNWFRQS 387
Query: 382 GHEPSVVMYTALVHNRYSERKYREALSVVWEMEAANCPFDLPAYSVVIKLFVALGDLSRA 441
GH+PSVVMYT L+H+RYSE KYREAL+VVWEME ++C FDL AY VVIKLFVAL DL RA
Sbjct: 388 GHDPSVVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYRVVIKLFVALNDLPRA 447
Query: 442 VRYFAKLKEAGFTPTYCIYRNLITIYLAAGRLAKCKEIYKEAENAGYVMDKQITSMLLQA 501
VRYF+KLKEAG +PTY IYRNLIT+Y+ +GRLAKCKE++KEAE AG+ K++ + LLQ
Sbjct: 448 VRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMAGFKFSKEMAAGLLQL 488
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP142_ARATH | 4.1e-137 | 55.72 | Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana GN... | [more] |
| PP194_ARATH | 1.6e-11 | 27.27 | Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... | [more] |
| PP408_ARATH | 1.5e-09 | 28.66 | Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... | [more] |
| PP221_ARATH | 1.9e-09 | 24.61 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN... | [more] |
| PP397_ARATH | 2.5e-09 | 29.51 | Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LVM0_CUCSA | 5.3e-224 | 79.84 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G144300 PE=4 SV=1 | [more] |
| B9H5I8_POPTR | 7.3e-165 | 64.36 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27370g PE=4 SV=2 | [more] |
| A0A067KL02_JATCU | 6.0e-159 | 60.04 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08073 PE=4 SV=1 | [more] |
| A0A061FD99_THECC | 1.7e-158 | 58.71 | Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0344... | [more] |
| M5WPF2_PRUPE | 1.5e-157 | 60.08 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005053mg PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G01860.1 | 2.3e-138 | 55.72 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G39230.1 | 8.9e-13 | 27.27 | LATERAL ORGAN JUNCTION | [more] |
| AT5G39980.1 | 8.3e-11 | 28.66 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09060.1 | 1.1e-10 | 24.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G25630.2 | 1.4e-10 | 29.51 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
