CmoCh11G019920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G019920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionEthylene-responsive transcription factor
LocationCmo_Chr11 : 13647284 .. 13647928 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGACCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGATACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCTCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTATCGCTCAGGGATATCCTATTCGGTATGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCCGACTCATTGTCCGTGGTTGACTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA

mRNA sequence

ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGACCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGATACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCTCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTATCGCTCAGGGATATCCTATTCGGTATGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCCGACTCATTGTCCGTGGTTGACTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA

Coding sequence (CDS)

ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGACCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGATACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCTCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTATCGCTCAGGGATATCCTATTCGGTATGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCCGACTCATTGTCCGTGGTTGACTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA
Homology
[Close]
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-39
Identity = 110/227 (48.46%), Postives = 136/227 (59.91%), Query Frame = 1 

Query: 6   KSTAKKLPSLCN-TNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAY 65
           K   K  P+  N T+NNA+E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA 
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDNAARQFRGAKAKTNFPPPDELIDVS-PRKISQSPSPSSTVESSSSSSQEKTPSTEIV 125
           AYD AAR FRGAKAKTNFP   EL D   P   ++SPS SST++ +S       P T +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RSYGVARTFPFIQPQFLHQVGGGGSGS------ARPVLFMDAF-------VRPEFIAQGY 185
            S     T   + PQ    +GGGG GS      +RPV F+D          +P  +   +
Sbjct: 123 PS----ATAGNVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAF 182

Query: 186 --PIRYDSARFAAEIQTKSDSLSVVDCRPAKE----ILNLDLNLAPP 212
             P+ + + + A   Q+ SDS SVVD     E    +L+LDLNL PP
Sbjct: 183 RSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.9e-31
Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 1 

Query: 23  RELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAKTNF 82
           +E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA AYD AAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 83  PPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQFLHQ 142
           P P E   V+    + S    +TV ++   ++++               FPF   +    
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPFACHRERKV 148

Query: 143 VGGGGSGSARPVLFMD----AFVRPEFIAQGYPIRYDSARFAAEIQTKSDSLSVVDCRPA 202
           VGG  S       F D    A +R E +++  P+R+D       I  +      V   P 
Sbjct: 149 VGGYASAG----FFFDPSRAASLRAE-LSRVCPVRFDPVNIELSIGIR----ETVKVEPR 197

Query: 203 KEILNLDLNLAPPV 213
           +E LNLDLNLAPPV
Sbjct: 209 RE-LNLDLNLAPPV 197

[Close]
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.7e-29
Identity = 69/99 (69.70%), Postives = 76/99 (76.77%), Query Frame = 1 

Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           +  +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAA AYD AAR+FRG KAK
Sbjct: 20  DGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAK 79

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTP 119
           TNFP P E         +QSPS SSTVESSS  +    P
Sbjct: 80  TNFPSPTE---------NQSPSHSSTVESSSGENGVHAP 109

[Close]
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-28
Identity = 68/99 (68.69%), Postives = 75/99 (75.76%), Query Frame = 1 

Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           N  +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAA AYD AAR+FRG KAK
Sbjct: 20  NGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAK 79

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTP 119
           TNFP P E         +QS S SST+ESSS  +    P
Sbjct: 80  TNFPLPSE---------NQSTSHSSTMESSSGETGIHAP 109

[Close]
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-26
Identity = 83/204 (40.69%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 19  NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
           +N A+E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AA AYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 79  KTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQ 138
           KTNF             +  SP+ SSTV  S ++++  TP                  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP------------------PH 142

Query: 139 FLHQVGGGGSGSAR-----PVLFMDAFVRPEFIAQGYPIRYDSARFAAEIQTKSDSLSVV 198
               +GGGG+   +     PV + +    P+    G             +Q++S++ SVV
Sbjct: 143 LELSLGGGGACRRKIPLVHPVYYYNMATYPKMTTCG-------------VQSESETSSVV 185

Query: 199 D----CRPAKEILNLDLNLAPPVD 214
           D           L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]
BLAST of CmoCh11G019920 vs. TrEMBL
Match: V5QP37_MOMCH (Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.0e-80
Identity = 170/232 (73.28%), Postives = 187/232 (80.60%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV++EKSTAKKL +   T+NN RELHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAE
Sbjct: 1   MVAREKSTAKKLTA---TSNNGRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFP P+ELI+VSP KI+ SPS SSTVESSSSSSQEK+PS+
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSS 120

Query: 121 EIVRSYGVA----RTFPFIQPQFLHQV-------GGGGSGSARPVLFMDAFVRPEFIAQG 180
           EI R YG A    RTFPFIQPQF  QV           + +ARPVLFMDAF RPEF+A G
Sbjct: 121 EIFRGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHG 180

Query: 181 YPIRYD------SARFAAEI-QTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
           YP+R+D      +ARFA  I Q+ SDS SVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 YPLRFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]
BLAST of CmoCh11G019920 vs. TrEMBL
Match: A0A0A0K742_CUCSA (Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-76
Identity = 157/220 (71.36%), Postives = 176/220 (80.00%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+ +KS    LPSL  +NNNA++LHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAE
Sbjct: 1   MVANQKS----LPSL--SNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFP PD+ IDVSP   +QSPSP+ST++SSSSS+ EKTPS 
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQGYPIRYDSA--- 180
           EI RSYGV RTFPFIQPQFLH     G G+ RP+LF D + R EF+A GYPIR+D A   
Sbjct: 121 EIARSYGVGRTFPFIQPQFLH-----GGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVD 180

Query: 181 ---RFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
              RF   IQT ++S S+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 LTSRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]
BLAST of CmoCh11G019920 vs. TrEMBL
Match: V4U3I7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.7e-49
Identity = 118/229 (51.53%), Postives = 152/229 (66.38%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           M  KE++ +    ++ N +NN +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 36  MAPKERTISGNRKNIDNRSNNKKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 95

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKIS-QSPSPSSTVESSSS-SSQEKTP 120
           EAA AYD AAR+FRG+KAKTNFP P E++ ++    + QSPS SSTVESSSS    E   
Sbjct: 96  EAARAYDAAAREFRGSKAKTNFPLPSEIVAINKNSNNQQSPSQSSTVESSSSPPPMEPNV 155

Query: 121 STEIVR-------SYGVARTFPFI--QPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQG 180
             E+ R         G+   FPF+  QP  +   GG  +G+A PVLF++ F     +   
Sbjct: 156 EREVTRHVGCFGSGNGLVGRFPFVYQQPGVVALGGGCVTGAAPPVLFLNGFGGSNLMGSV 215

Query: 181 YPIRYDSARFA------AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPV 213
           YP+R+DSA          E +T+S S++ VDC+P + +LNLDLNLAPPV
Sbjct: 216 YPVRFDSAGIGFNGAVRNETETESSSVAAVDCKP-RRVLNLDLNLAPPV 263

[Close]
BLAST of CmoCh11G019920 vs. TrEMBL
Match: I3SGY0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.7e-49
Identity = 124/218 (56.88%), Postives = 145/218 (66.51%), Query Frame = 1 

Query: 19  NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
           +NNA E+HFRGVRKRPWGRY+AEIRDPGKKSRVWLGTFDTAEEAA AYD AARQFRG KA
Sbjct: 33  SNNATEVHFRGVRKRPWGRYSAEIRDPGKKSRVWLGTFDTAEEAARAYDAAARQFRGPKA 92

Query: 79  KTNFPP---------PDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYG-V 138
           KTNFP          P++++ V+  K +QSPS SSTVESS       TP  +I R  G V
Sbjct: 93  KTNFPQSPSPDNNTGPNDVV-VANVKANQSPSQSSTVESS-------TPERDITRGGGVV 152

Query: 139 ARTFPF--IQPQFLHQVGGGG----SGSARPVLFMDAFVRPEFIAQGYPIRYDS------ 198
              FPF  + PQ L    GGG    +   RPV+F+D   + EF AQ +P+R++S      
Sbjct: 153 VDRFPFLPLHPQQLMPFSGGGDVVYTAPVRPVIFLDPASQAEFFAQRFPVRFESGPVDFT 212

Query: 199 ARFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
             F   IQ+ SDS SVVDCRP K  LNLDLNLAPP +A
Sbjct: 213 GMFGGGIQSDSDSSSVVDCRP-KPTLNLDLNLAPPNEA 241

[Close]
BLAST of CmoCh11G019920 vs. TrEMBL
Match: Q2I2S8_MEDTR (Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.1e-48
Identity = 122/224 (54.46%), Postives = 143/224 (63.84%), Query Frame = 1 

Query: 1   MVSKEKSTAK-KLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTA 60
           MV+K K+ A  K+    N NNNA E+HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTA
Sbjct: 1   MVTKTKNAANLKIKKPSNNNNNATEIHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTA 60

Query: 61  EEAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPS 120
           EEAA AYDNAARQFRG KAKTNFPPP    DV       SPS SSTVESS  +   +   
Sbjct: 61  EEAARAYDNAARQFRGPKAKTNFPPPPS--DVK----EDSPSQSSTVESSVPAPDREVTR 120

Query: 121 TEIVRSYGVARTFPFIQ-PQFLHQVGGGGSGSAR---PVLFMDAFVRPEFIAQGYPIRYD 180
            E+     V   FPF+   Q +    G G+G+     PV F D   R EF+ Q +  R++
Sbjct: 121 REVPTGGSVMDRFPFLSIQQQIMPFAGAGAGAVDGMVPVFFYDPAGRAEFLNQRFTNRFE 180

Query: 181 ------SARFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVD 214
                 +  F   +Q+ SDS SVVDC+P K  LNLDLNLAPP++
Sbjct: 181 PEPVQFNIGFGGGVQSDSDSSSVVDCQP-KRALNLDLNLAPPME 217

[Close]
BLAST of CmoCh11G019920 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 164.1 bits (414), Expect = 9.6e-41
Identity = 110/227 (48.46%), Postives = 136/227 (59.91%), Query Frame = 1 

Query: 6   KSTAKKLPSLCN-TNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAY 65
           K   K  P+  N T+NNA+E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA 
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDNAARQFRGAKAKTNFPPPDELIDVS-PRKISQSPSPSSTVESSSSSSQEKTPSTEIV 125
           AYD AAR FRGAKAKTNFP   EL D   P   ++SPS SST++ +S       P T +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RSYGVARTFPFIQPQFLHQVGGGGSGS------ARPVLFMDAF-------VRPEFIAQGY 185
            S     T   + PQ    +GGGG GS      +RPV F+D          +P  +   +
Sbjct: 123 PS----ATAGNVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAF 182

Query: 186 --PIRYDSARFAAEIQTKSDSLSVVDCRPAKE----ILNLDLNLAPP 212
             P+ + + + A   Q+ SDS SVVD     E    +L+LDLNL PP
Sbjct: 183 RSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]
BLAST of CmoCh11G019920 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 90/194 (46.39%), Postives = 113/194 (58.25%), Query Frame = 1 

Query: 23  RELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAKTNF 82
           +E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA AYD AAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 83  PPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQFLHQ 142
           P P E   V+    + S    +TV ++   ++++               FPF   +    
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPFACHRERKV 148

Query: 143 VGGGGSGSARPVLFMD----AFVRPEFIAQGYPIRYDSARFAAEIQTKSDSLSVVDCRPA 202
           VGG  S       F D    A +R E +++  P+R+D       I  +      V   P 
Sbjct: 149 VGGYASAG----FFFDPSRAASLRAE-LSRVCPVRFDPVNIELSIGIR----ETVKVEPR 197

Query: 203 KEILNLDLNLAPPV 213
           +E LNLDLNLAPPV
Sbjct: 209 RE-LNLDLNLAPPV 197

[Close]
BLAST of CmoCh11G019920 vs. TAIR10
Match: AT1G53170.1 (AT1G53170.1 ethylene response factor 8)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 83/204 (40.69%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 19  NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
           +N A+E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AA AYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 79  KTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQ 138
           KTNF             +  SP+ SSTV  S ++++  TP                  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP------------------PH 142

Query: 139 FLHQVGGGGSGSAR-----PVLFMDAFVRPEFIAQGYPIRYDSARFAAEIQTKSDSLSVV 198
               +GGGG+   +     PV + +    P+    G             +Q++S++ SVV
Sbjct: 143 LELSLGGGGACRRKIPLVHPVYYYNMATYPKMTTCG-------------VQSESETSSVV 185

Query: 199 D----CRPAKEILNLDLNLAPPVD 214
           D           L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]
BLAST of CmoCh11G019920 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 1 

Query: 19 NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
          N + +E+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAA AYD+AAR  RG KA
Sbjct: 20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKA 79

Query: 79 KTNFP 84
          KTNFP
Sbjct: 80 KTNFP 84

[Close]
BLAST of CmoCh11G019920 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24
Identity = 61/90 (67.78%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           N    + +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAA AYD  A +FRGAKAK
Sbjct: 13  NEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAK 72

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESS 110
           TNFP  +  I+     ++QS S SSTVESS
Sbjct: 73  TNFPCYN--INAHCLSLTQSLSQSSTVESS 100

[Close]
BLAST of CmoCh11G019920 vs. NCBI nr
Match: gi|659110551|ref|XP_008455284.1| (PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 4.6e-85
Identity = 170/220 (77.27%), Postives = 186/220 (84.55%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+KEKS+ ++ PSL  +NNN ++LHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 33  MVAKEKSSPQQPPSL--SNNNGKDLHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 92

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFPPPDELIDVSP KI+QSPSPSSTV+SSSSSS EKTPS 
Sbjct: 93  EAARAYDTAARQFRGAKAKTNFPPPDELIDVSPHKINQSPSPSSTVDSSSSSSHEKTPSP 152

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQGYPIRYDSA--- 180
           EI RSYGV RTFPFIQPQFLH    GG GS RPVLF+D F +PEF+A GYPIR+D A   
Sbjct: 153 EISRSYGVGRTFPFIQPQFLH----GGGGSVRPVLFVDVFGKPEFVAHGYPIRFDPATVD 212

Query: 181 ---RFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
              RF   IQ+ S+S S+VD RPAKEILNLDLNLAPPVDA
Sbjct: 213 LTSRFTGGIQSDSNSSSLVDFRPAKEILNLDLNLAPPVDA 246

[Close]
BLAST of CmoCh11G019920 vs. NCBI nr
Match: gi|559783566|gb|AHB18381.1| (ethylene-responsive transcription factor [Momordica charantia])

HSP 1 Score: 305.8 bits (782), Expect = 5.8e-80
Identity = 170/232 (73.28%), Postives = 187/232 (80.60%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV++EKSTAKKL +   T+NN RELHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAE
Sbjct: 1   MVAREKSTAKKLTA---TSNNGRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFP P+ELI+VSP KI+ SPS SSTVESSSSSSQEK+PS+
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSS 120

Query: 121 EIVRSYGVA----RTFPFIQPQFLHQV-------GGGGSGSARPVLFMDAFVRPEFIAQG 180
           EI R YG A    RTFPFIQPQF  QV           + +ARPVLFMDAF RPEF+A G
Sbjct: 121 EIFRGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHG 180

Query: 181 YPIRYD------SARFAAEI-QTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
           YP+R+D      +ARFA  I Q+ SDS SVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 YPLRFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]
BLAST of CmoCh11G019920 vs. NCBI nr
Match: gi|449438123|ref|XP_004136839.1| (PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.9e-76
Identity = 157/220 (71.36%), Postives = 176/220 (80.00%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+ +KS    LPSL  +NNNA++LHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAE
Sbjct: 1   MVANQKS----LPSL--SNNNAKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFP PD+ IDVSP   +QSPSP+ST++SSSSS+ EKTPS 
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQGYPIRYDSA--- 180
           EI RSYGV RTFPFIQPQFLH     G G+ RP+LF D + R EF+A GYPIR+D A   
Sbjct: 121 EIARSYGVGRTFPFIQPQFLH-----GGGTVRPLLFTDVYGRAEFVAHGYPIRFDPATVD 180

Query: 181 ---RFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 215
              RF   IQT ++S S+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 LTSRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]
BLAST of CmoCh11G019920 vs. NCBI nr
Match: gi|502144028|ref|XP_004505555.1| (PREDICTED: ethylene-responsive transcription factor 9 [Cicer arietinum])

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 129/231 (55.84%), Postives = 147/231 (63.64%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSK K+   K+   CN   NA E+HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKPKNATLKINKPCN---NAAEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRG KAKTNFPPP + I       +QSPS SSTVESS       TP  
Sbjct: 61  EAARAYDAAARQFRGPKAKTNFPPPSD-IKEDNNVNNQSPSQSSTVESS-------TPER 120

Query: 121 EIVR----SYGVARTFPF--IQPQFLHQVGGGGSG------SARPVLFMDAFVRPEFIAQ 180
           EI R    S GV   FPF  IQ Q++   G GG        +  PV F+D   R EF+ Q
Sbjct: 121 EITRPREVSGGVMDRFPFLSIQQQYMPFSGTGGVAVDGMVTAVHPVFFLDPAARAEFLNQ 180

Query: 181 GYPIRYD------SARFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVD 214
            +  R++      +  F   +Q+ SDS SVVDC+P K  LNLDLNLAPP+D
Sbjct: 181 RFSPRFEPSPVEFNIGFCGGVQSDSDSSSVVDCQP-KRALNLDLNLAPPMD 219

[Close]
BLAST of CmoCh11G019920 vs. NCBI nr
Match: gi|985436397|ref|XP_006469902.2| (PREDICTED: ethylene-responsive transcription factor 9 [Citrus sinensis])

HSP 1 Score: 203.0 bits (515), Expect = 5.3e-49
Identity = 118/229 (51.53%), Postives = 152/229 (66.38%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           M  KE++ +    ++ N +NN +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MAPKERTISGNRKNIDNRSNNKKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKIS-QSPSPSSTVESSSS-SSQEKTP 120
           EAA AYD AAR+FRG+KAKTNFP P E++ ++    + QSPS SSTVESSSS    E   
Sbjct: 61  EAARAYDAAAREFRGSKAKTNFPLPSEIVAINKNSNNQQSPSQSSTVESSSSPPPMEPNV 120

Query: 121 STEIVR-------SYGVARTFPFI--QPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQG 180
             E+ R         G+   FPF+  QP  +   GG  +G+A PVLF++ F     +   
Sbjct: 121 EREVTRHVGCFGSGNGLVGRFPFVYQQPGVVALGGGCVTGAAPPVLFLNGFGGSNLMGSV 180

Query: 181 YPIRYDSARFA------AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPV 213
           YP+R+DSA          E +T+S S++ VDC+P + +LNLDLNLAPPV
Sbjct: 181 YPVRFDSAGIGFNGAVRNETETESSSVAAVDCKP-RRVLNLDLNLAPPV 228

The following BLAST results are available for this feature:
BLAST of CmoCh11G019920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF78_ARATH1.7e-3948.46Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 ... [more]
ERF80_ARATH2.9e-3146.39Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 ... [more]
ERF4_TOBAC4.7e-2969.70Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=... [more]
ERF4_NICSY3.9e-2868.69Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 ... [more]
ERF79_ARATH2.2e-2640.69Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 ... [more]
BLAST of CmoCh11G019920 vs. TrEMBL
Match NameE-valueIdentityDescription
V5QP37_MOMCH4.0e-8073.28Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1[more]
A0A0A0K742_CUCSA2.7e-7671.36Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 P... [more]
V4U3I7_9ROSI3.7e-4951.53Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1[more]
I3SGY0_LOTJA3.7e-4956.88Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Q2I2S8_MEDTR3.1e-4854.46Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1[more]
BLAST of CmoCh11G019920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15210.19.6e-4148.46 ethylene responsive element binding factor 4[more]
AT5G44210.11.6e-3246.39 erf domain protein 9[more]
AT1G53170.11.2e-2740.69 ethylene response factor 8[more]
AT1G50640.12.2e-2476.92 ethylene responsive element binding factor 3[more]
AT1G28370.12.2e-2467.78 ERF domain protein 11[more]
BLAST of CmoCh11G019920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110551|ref|XP_008455284.1|4.6e-8577.27PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucu... [more]
gi|559783566|gb|AHB18381.1|5.8e-8073.28ethylene-responsive transcription factor [Momordica charantia][more]
gi|449438123|ref|XP_004136839.1|3.9e-7671.36PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus][more]
gi|502144028|ref|XP_004505555.1|1.8e-4955.84PREDICTED: ethylene-responsive transcription factor 9 [Cicer arietinum][more]
gi|985436397|ref|XP_006469902.2|5.3e-4951.53PREDICTED: ethylene-responsive transcription factor 9 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G019920.1CmoCh11G019920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 27..38
score: 1.7E-10coord: 49..65
score: 1.7
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 26..83
score: 7.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 26..75
score: 3.7
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 26..89
score: 3.6
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 26..83
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 26..83
score: 7.19
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 19..214
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G019920Cucsa.195660Cucumber (Gy14) v1cgycmoB0572
CmoCh11G019920CmaCh19G009980Cucurbita maxima (Rimu)cmacmoB496
CmoCh11G019920CmaCh11G019100Cucurbita maxima (Rimu)cmacmoB113
CmoCh11G019920Cla002237Watermelon (97103) v1cmowmB094
CmoCh11G019920Csa7G049230Cucumber (Chinese Long) v2cmocuB132
CmoCh11G019920ClCG07G002550Watermelon (Charleston Gray)cmowcgB122
CmoCh11G019920CSPI07G04890Wild cucumber (PI 183967)cmocpiB131
CmoCh11G019920Lsi04G020490Bottle gourd (USVL1VR-Ls)cmolsiB110
CmoCh11G019920Lsi11G017090Bottle gourd (USVL1VR-Ls)cmolsiB087
CmoCh11G019920Cp4.1LG04g02810Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G019920Cp4.1LG15g08200Cucurbita pepo (Zucchini)cmocpeB097
CmoCh11G019920MELO3C025608.2Melon (DHL92) v3.6.1cmomedB142
CmoCh11G019920CsaV3_7G005810Cucumber (Chinese Long) v3cmocucB0155
CmoCh11G019920Cla97C07G130890Watermelon (97103) v2cmowmbB127
CmoCh11G019920Bhi09G002830Wax gourdcmowgoB0144
CmoCh11G019920Bhi05G001682Wax gourdcmowgoB0109
CmoCh11G019920CsGy7G004440Cucumber (Gy14) v2cgybcmoB877
CmoCh11G019920Carg19152Silver-seed gourdcarcmoB0979
CmoCh11G019920Carg19247Silver-seed gourdcarcmoB1180
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G019920CmoCh19G010380Cucurbita moschata (Rifu)cmocmoB112
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G019920Watermelon (97103) v2cmowmbB090
CmoCh11G019920Wax gourdcmowgoB0127
CmoCh11G019920Cucurbita moschata (Rifu)cmocmoB108
CmoCh11G019920Cucurbita moschata (Rifu)cmocmoB114
CmoCh11G019920Cucurbita moschata (Rifu)cmocmoB121
CmoCh11G019920Cucumber (Gy14) v1cgycmoB0031
CmoCh11G019920Cucurbita maxima (Rimu)cmacmoB492
CmoCh11G019920Cucurbita maxima (Rimu)cmacmoB539
CmoCh11G019920Cucurbita maxima (Rimu)cmacmoB576
CmoCh11G019920Cucumber (Chinese Long) v2cmocuB127
CmoCh11G019920Melon (DHL92) v3.5.1cmomeB090
CmoCh11G019920Watermelon (Charleston Gray)cmowcgB090
CmoCh11G019920Watermelon (97103) v1cmowmB112
CmoCh11G019920Cucurbita pepo (Zucchini)cmocpeB093
CmoCh11G019920Cucurbita pepo (Zucchini)cmocpeB101
CmoCh11G019920Cucurbita pepo (Zucchini)cmocpeB132
CmoCh11G019920Bottle gourd (USVL1VR-Ls)cmolsiB078
CmoCh11G019920Melon (DHL92) v3.6.1cmomedB096
CmoCh11G019920Silver-seed gourdcarcmoB0038
CmoCh11G019920Silver-seed gourdcarcmoB0722