Lsi11G017090 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G017090
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionEthylene-responsive transcription factor
Locationchr11 : 25236694 .. 25237368 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTCCAAGGAAAAATCCACCGCCAAGAAGCTCCCTTCTCTTTCCAACAACAACAATGGCAACGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACAGCTGAGGAGGCGGCGCGTGCTTACGATACCGCCGCCCGCCAGTTCCGCGGCGCTAAGGCTAAAACCAATTTTCCTCTGCCTGACGAGTTGATCGACGTTTCTCCTCAAAAGATCAACCAAAGCCCTAGCCCTAGCAGCACCGTCGACTCCTCTTCCTCCTCCAGCCAAGAAAAAACCCCTTCCCCGGAGATCGTCCGAGGCTACGGCGTCGGACGAACTTTTCCGTTCATTCAGCCTCAGTTTTTGCATCAGGTCGCCTGCAATGCCTCCGCCGTTTCCGGCGGCGGCGGCGTTCGTCCAGTTTTGTTTATGGACGCTTTTGGTAGACCGGAGTTTGTCGCTCATGGCTATCCTTTACGGTTCGATTCGGCGACTGTGGATTTGACGGCGAGGTTCGCCGGCGGGATCCAGAGCGATTCGGACTCATCGTCGTTGGTTGACTGCCGACCGGGGAAGGAAATTCTGAATCTCGATCTTAATCTCGCTCCGCCGGTGGACGCTTGA

mRNA sequence

ATGGTTTCCAAGGAAAAATCCACCGCCAAGAAGCTCCCTTCTCTTTCCAACAACAACAATGGCAACGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACAGCTGAGGAGGCGGCGCGTGCTTACGATACCGCCGCCCGCCAGTTCCGCGGCGCTAAGGCTAAAACCAATTTTCCTCTGCCTGACGAGTTGATCGACGTTTCTCCTCAAAAGATCAACCAAAGCCCTAGCCCTAGCAGCACCGTCGACTCCTCTTCCTCCTCCAGCCAAGAAAAAACCCCTTCCCCGGAGATCGTCCGAGGCTACGGCGTCGGACGAACTTTTCCGTTCATTCAGCCTCAGTTTTTGCATCAGGTCGCCTGCAATGCCTCCGCCGTTTCCGGCGGCGGCGGCGTTCGTCCAGTTTTGTTTATGGACGCTTTTGGTAGACCGGAGTTTGTCGCTCATGGCTATCCTTTACGGTTCGATTCGGCGACTGTGGATTTGACGGCGAGGTTCGCCGGCGGGATCCAGAGCGATTCGGACTCATCGTCGTTGGTTGACTGCCGACCGGGGAAGGAAATTCTGAATCTCGATCTTAATCTCGCTCCGCCGGTGGACGCTTGA

Coding sequence (CDS)

ATGGTTTCCAAGGAAAAATCCACCGCCAAGAAGCTCCCTTCTCTTTCCAACAACAACAATGGCAACGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAAAGCCGCGTTTGGCTCGGTACCTTCGACACAGCTGAGGAGGCGGCGCGTGCTTACGATACCGCCGCCCGCCAGTTCCGCGGCGCTAAGGCTAAAACCAATTTTCCTCTGCCTGACGAGTTGATCGACGTTTCTCCTCAAAAGATCAACCAAAGCCCTAGCCCTAGCAGCACCGTCGACTCCTCTTCCTCCTCCAGCCAAGAAAAAACCCCTTCCCCGGAGATCGTCCGAGGCTACGGCGTCGGACGAACTTTTCCGTTCATTCAGCCTCAGTTTTTGCATCAGGTCGCCTGCAATGCCTCCGCCGTTTCCGGCGGCGGCGGCGTTCGTCCAGTTTTGTTTATGGACGCTTTTGGTAGACCGGAGTTTGTCGCTCATGGCTATCCTTTACGGTTCGATTCGGCGACTGTGGATTTGACGGCGAGGTTCGCCGGCGGGATCCAGAGCGATTCGGACTCATCGTCGTTGGTTGACTGCCGACCGGGGAAGGAAATTCTGAATCTCGATCTTAATCTCGCTCCGCCGGTGGACGCTTGA

Protein sequence

MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPEIVRGYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVDA
Homology
[Close]
BLAST of Lsi11G017090 vs. Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.5e-41
Identity = 116/234 (49.57%), Postives = 134/234 (57.26%), Query Frame = 1 

Query: 6   KSTAKKLPSLSN--NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAR 65
           K   K  P+ +N  +NN  E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAAR
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDTAARQFRGAKAKTNFPLPDELIDVS-PQKINQSPSPSSTVDSSSSSSQEKTPSPEIV 125
           AYDTAAR FRGAKAKTNFP   EL D   P    +SPS SST+D +S       P   +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RGYGVGRTFPFIQPQFLHQVACNASAVSGGGG-------VRPVLFMDAFGRPEFVAHGYP 185
                G   P ++           S   GGGG        RPV F+D  G    V  G P
Sbjct: 123 PSATAGNVPPQLE----------LSLGGGGGGSCYQIPMSRPVYFLDLMGIGN-VGRGQP 182

Query: 186 ----LRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKE----ILNLDLNLAPP 222
                 F S  V +  + A G QSDSDSSS+VD   G E    +L+LDLNL PP
Sbjct: 183 PPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]
BLAST of Lsi11G017090 vs. Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-36
Identity = 110/240 (45.83%), Postives = 132/240 (55.00%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNG-NELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           M  K K +   L   +   NG  E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MAVKNKVSNGDLKGGNVKTNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSP 120
           EAA+AYDTAAR+FRG KAKTNFPLP E         NQS S SST++SSS  +    P  
Sbjct: 61  EAAKAYDTAAREFRGPKAKTNFPLPSE---------NQSTSHSSTMESSSGETGIHAPPH 120

Query: 121 -----EIVRGYG---------VGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFG 180
                ++ R  G           R+     P F HQ    A   +G    +PVL  D+  
Sbjct: 121 APLELDLTRRLGSVAADGGDNCRRSGEVGYPIF-HQQPTVAVLPNG----QPVLLFDSLW 180

Query: 181 RPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDSSSLVDCRP--GKEILNLDLNLAPPVD 224
           RP  V    P       +      AG   + SDSSS+V+     GK  ++LDLNLAPP +
Sbjct: 181 RPGVVNRPQPYHVMPMAMGFNGVNAGVDPTVSDSSSVVEENQYDGKRGIDLDLNLAPPTE 226

[Close]
BLAST of Lsi11G017090 vs. Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-35
Identity = 101/215 (46.98%), Postives = 120/215 (55.81%), Query Frame = 1 

Query: 23  ELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNFP 82
           E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAA+AYDTAAR+FRG KAKTNFP
Sbjct: 24  EVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83

Query: 83  LPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSP-----EIVRGYG---------VG 142
            P E         NQSPS SSTV+SSS  +    P       ++ R  G           
Sbjct: 84  SPTE---------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAADGGDNCR 143

Query: 143 RTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDSATVDLTAR 202
           R+     P F HQ    A   +G    +PVL  D+  R   V    P        +    
Sbjct: 144 RSGEVGYPIF-HQQPTVAVLPNG----QPVLLFDSLWRAGVVNRPQPYHVTPMGFNGVNA 203

Query: 203 FAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVD 224
             G   SDS S+   +   GK  ++LDLNLAPP++
Sbjct: 204 GVGPTVSDSSSAVEENQYDGKRGIDLDLNLAPPME 224

[Close]
BLAST of Lsi11G017090 vs. Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 95/203 (46.80%), Postives = 116/203 (57.14%), Query Frame = 1 

Query: 23  ELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNFP 82
           E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAARAYDTAAR+FRG+KAKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 83  LPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPEIVRGYGVGRTFPFIQPQFLHQV 142
           LP E   V+    N S    +TV ++   ++++               FPF         
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPF--------- 149

Query: 143 ACNASAVSGGGGVRPVLFMD---AFGRPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDS 202
           AC+      GG      F D   A      ++   P+RFD   ++L+     GI+     
Sbjct: 150 ACHRERKVVGGYASAGFFFDPSRAASLRAELSRVCPVRFDPVNIELSI----GIR----- 197

Query: 203 SSLVDCRPGKEILNLDLNLAPPV 223
              V   P +E LNLDLNLAPPV
Sbjct: 210 -ETVKVEPRRE-LNLDLNLAPPV 197

[Close]
BLAST of Lsi11G017090 vs. Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.7e-27
Identity = 89/224 (39.73%), Postives = 114/224 (50.89%), Query Frame = 1 

Query: 4   KEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAR 63
           K    A   P+   +N   E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AAR
Sbjct: 9   KPDPVAPTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAAR 68

Query: 64  AYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPEIVR 123
           AYD AAR FRG KAKTNF +           +  SP+ SSTV  S ++++  TP P +  
Sbjct: 69  AYDAAARDFRGVKAKTNFGVI----------VGSSPTQSSTVVDSPTAARFITP-PHLEL 128

Query: 124 GYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDSATV 183
             G G              AC          V PV + +    P+    G          
Sbjct: 129 SLGGGG-------------ACRRKIPL----VHPVYYYNMATYPKMTTCG---------- 185

Query: 184 DLTARFAGGIQSDSDSSSLVDCRPG----KEILNLDLNLAPPVD 224
                    +QS+S++SS+VD   G       L+LDLNLAPP +
Sbjct: 189 ---------VQSESETSSVVDFEGGAGKISPPLDLDLNLAPPAE 185

[Close]
BLAST of Lsi11G017090 vs. TrEMBL
Match: V5QP37_MOMCH (Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.2e-97
Identity = 192/231 (83.12%), Postives = 202/231 (87.45%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 60
           MV++EKSTAKKL + SNN  G ELHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEE
Sbjct: 1   MVAREKSTAKKLTATSNN--GRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEE 60

Query: 61  AARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPE 120
           AARAYDTAARQFRGAKAKTNFPLP+ELI+VSP KIN SPS SSTV+SSSSSSQEK+PS E
Sbjct: 61  AARAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSSE 120

Query: 121 IVRGYG----VGRTFPFIQPQFLHQ--VACNASAVSGGGGVRPVLFMDAFGRPEFVAHGY 180
           I RGYG     GRTFPFIQPQF  Q  V CNASA +     RPVLFMDAFGRPEFVAHGY
Sbjct: 121 IFRGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHGY 180

Query: 181 PLRFDSATVDLTARFAGGI-QSDSDSSSLVDCRPGKEILNLDLNLAPPVDA 225
           PLRFD ATVDLTARFAGGI QSDSDSSS+VDCRP KEILNLDLNLAPPVDA
Sbjct: 181 PLRFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]
BLAST of Lsi11G017090 vs. TrEMBL
Match: A0A0A0K742_CUCSA (Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.5e-90
Identity = 176/224 (78.57%), Postives = 190/224 (84.82%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 60
           MV+ +KS    LPSLSNNN   +LHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEE
Sbjct: 1   MVANQKS----LPSLSNNN-AKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEE 60

Query: 61  AARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPE 120
           AARAYDTAARQFRGAKAKTNFPLPD+ IDVSP   NQSPSP+ST+DSSSSS+ EKTPSPE
Sbjct: 61  AARAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPE 120

Query: 121 IVRGYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDS 180
           I R YGVGRTFPFIQPQFLH          GGG VRP+LF D +GR EFVAHGYP+RFD 
Sbjct: 121 IARSYGVGRTFPFIQPQFLH----------GGGTVRPLLFTDVYGRAEFVAHGYPIRFDP 180

Query: 181 ATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVDA 225
           ATVDLT+RF GGIQ+D++SSSLVD RP KEILNLDLNLAPPVDA
Sbjct: 181 ATVDLTSRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]
BLAST of Lsi11G017090 vs. TrEMBL
Match: I3SGY0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55
Identity = 139/248 (56.05%), Postives = 163/248 (65.73%), Query Frame = 1 

Query: 2   VSKEKSTAKKLPSLSN-------NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGT 61
           V+K ++TA    ++S        +NN  E+HFRGVRKRPWGRY+AEIRDPGKKSRVWLGT
Sbjct: 10  VTKARNTAAATTAVSAKSKIHKPSNNATEVHFRGVRKRPWGRYSAEIRDPGKKSRVWLGT 69

Query: 62  FDTAEEAARAYDTAARQFRGAKAKTNFPL---------PDELIDVSPQKINQSPSPSSTV 121
           FDTAEEAARAYD AARQFRG KAKTNFP          P++++ V+  K NQSPS SSTV
Sbjct: 70  FDTAEEAARAYDAAARQFRGPKAKTNFPQSPSPDNNTGPNDVV-VANVKANQSPSQSSTV 129

Query: 122 DSSSSSSQEKTPSPEIVRGYG-VGRTFPF--IQPQFLHQVACNASAVSGGGG------VR 181
           +SS       TP  +I RG G V   FPF  + PQ L          SGGG       VR
Sbjct: 130 ESS-------TPERDITRGGGVVVDRFPFLPLHPQQL-------MPFSGGGDVVYTAPVR 189

Query: 182 PVLFMDAFGRPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDL 225
           PV+F+D   + EF A  +P+RF+S  VD T  F GGIQSDSDSSS+VDCRP K  LNLDL
Sbjct: 190 PVIFLDPASQAEFFAQRFPVRFESGPVDFTGMFGGGIQSDSDSSSVVDCRP-KPTLNLDL 241

[Close]
BLAST of Lsi11G017090 vs. TrEMBL
Match: Q2I2S8_MEDTR (Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.9e-54
Identity = 131/228 (57.46%), Postives = 149/228 (65.35%), Query Frame = 1 

Query: 1   MVSKEKSTAK---KLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60
           MV+K K+ A    K PS +NNNN  E+HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT
Sbjct: 1   MVTKTKNAANLKIKKPS-NNNNNATEIHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60

Query: 61  AEEAARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTP 120
           AEEAARAYD AARQFRG KAKTNFP P    DV       SPS SSTV+SS  +   +  
Sbjct: 61  AEEAARAYDNAARQFRGPKAKTNFPPPPS--DVK----EDSPSQSSTVESSVPAPDREVT 120

Query: 121 SPEIVRGYGVGRTFPF--IQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYP 180
             E+  G  V   FPF  IQ Q +      A AV    G+ PV F D  GR EF+   + 
Sbjct: 121 RREVPTGGSVMDRFPFLSIQQQIMPFAGAGAGAVD---GMVPVFFYDPAGRAEFLNQRFT 180

Query: 181 LRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVD 224
            RF+   V     F GG+QSDSDSSS+VDC+P K  LNLDLNLAPP++
Sbjct: 181 NRFEPEPVQFNIGFGGGVQSDSDSSSVVDCQP-KRALNLDLNLAPPME 217

[Close]
BLAST of Lsi11G017090 vs. TrEMBL
Match: V4U3I7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.0e-50
Identity = 120/235 (51.06%), Postives = 151/235 (64.26%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSN-NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           M  KE++ +    ++ N +NN  E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 36  MAPKERTISGNRKNIDNRSNNKKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 95

Query: 61  EAARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKIN-QSPSPSSTVDSSSS-SSQEKTP 120
           EAARAYD AAR+FRG+KAKTNFPLP E++ ++    N QSPS SSTV+SSSS    E   
Sbjct: 96  EAARAYDAAAREFRGSKAKTNFPLPSEIVAINKNSNNQQSPSQSSTVESSSSPPPMEPNV 155

Query: 121 SPEIVR-------GYGVGRTFPFIQPQFLHQVACNASAVSGG---GGVRPVLFMDAFGRP 180
             E+ R       G G+   FPF+  Q          A+ GG   G   PVLF++ FG  
Sbjct: 156 EREVTRHVGCFGSGNGLVGRFPFVYQQ------PGVVALGGGCVTGAAPPVLFLNGFGGS 215

Query: 181 EFVAHGYPLRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPV 223
             +   YP+RFDSA +          +++S S + VDC+P + +LNLDLNLAPPV
Sbjct: 216 NLMGSVYPVRFDSAGIGFNGAVRNETETESSSVAAVDCKP-RRVLNLDLNLAPPV 263

[Close]
BLAST of Lsi11G017090 vs. TAIR10
Match: AT3G15210.1 (AT3G15210.1 ethylene responsive element binding factor 4)

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-42
Identity = 116/234 (49.57%), Postives = 134/234 (57.26%), Query Frame = 1 

Query: 6   KSTAKKLPSLSN--NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAR 65
           K   K  P+ +N  +NN  E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAAR
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDTAARQFRGAKAKTNFPLPDELIDVS-PQKINQSPSPSSTVDSSSSSSQEKTPSPEIV 125
           AYDTAAR FRGAKAKTNFP   EL D   P    +SPS SST+D +S       P   +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RGYGVGRTFPFIQPQFLHQVACNASAVSGGGG-------VRPVLFMDAFGRPEFVAHGYP 185
                G   P ++           S   GGGG        RPV F+D  G    V  G P
Sbjct: 123 PSATAGNVPPQLE----------LSLGGGGGGSCYQIPMSRPVYFLDLMGIGN-VGRGQP 182

Query: 186 ----LRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKE----ILNLDLNLAPP 222
                 F S  V +  + A G QSDSDSSS+VD   G E    +L+LDLNL PP
Sbjct: 183 PPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]
BLAST of Lsi11G017090 vs. TAIR10
Match: AT5G44210.1 (AT5G44210.1 erf domain protein 9)

HSP 1 Score: 144.8 bits (364), Expect = 6.3e-35
Identity = 95/203 (46.80%), Postives = 116/203 (57.14%), Query Frame = 1 

Query: 23  ELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAKTNFP 82
           E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAARAYDTAAR+FRG+KAKTNFP
Sbjct: 30  EVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89

Query: 83  LPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPEIVRGYGVGRTFPFIQPQFLHQV 142
           LP E   V+    N S    +TV ++   ++++               FPF         
Sbjct: 90  LPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPF--------- 149

Query: 143 ACNASAVSGGGGVRPVLFMD---AFGRPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDS 202
           AC+      GG      F D   A      ++   P+RFD   ++L+     GI+     
Sbjct: 150 ACHRERKVVGGYASAGFFFDPSRAASLRAELSRVCPVRFDPVNIELSI----GIR----- 197

Query: 203 SSLVDCRPGKEILNLDLNLAPPV 223
              V   P +E LNLDLNLAPPV
Sbjct: 210 -ETVKVEPRRE-LNLDLNLAPPV 197

[Close]
BLAST of Lsi11G017090 vs. TAIR10
Match: AT1G53170.1 (AT1G53170.1 ethylene response factor 8)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 89/224 (39.73%), Postives = 114/224 (50.89%), Query Frame = 1 

Query: 4   KEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAR 63
           K    A   P+   +N   E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AAR
Sbjct: 9   KPDPVAPTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAAR 68

Query: 64  AYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPEIVR 123
           AYD AAR FRG KAKTNF +           +  SP+ SSTV  S ++++  TP P +  
Sbjct: 69  AYDAAARDFRGVKAKTNFGVI----------VGSSPTQSSTVVDSPTAARFITP-PHLEL 128

Query: 124 GYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDSATV 183
             G G              AC          V PV + +    P+    G          
Sbjct: 129 SLGGGG-------------ACRRKIPL----VHPVYYYNMATYPKMTTCG---------- 185

Query: 184 DLTARFAGGIQSDSDSSSLVDCRPG----KEILNLDLNLAPPVD 224
                    +QS+S++SS+VD   G       L+LDLNLAPP +
Sbjct: 189 ---------VQSESETSSVVDFEGGAGKISPPLDLDLNLAPPAE 185

[Close]
BLAST of Lsi11G017090 vs. TAIR10
Match: AT1G28370.1 (AT1G28370.1 ERF domain protein 11)

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26
Identity = 68/110 (61.82%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 19  NNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKAK 78
           N GN + +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAARAYD  A +FRGAKAK
Sbjct: 13  NEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAK 72

Query: 79  TNFPLPDELIDVSPQKINQSPSPSSTVDSS-------SSSSQEKTPSPEI 122
           TNFP  +  I+     + QS S SSTV+SS       S S   + P P+I
Sbjct: 73  TNFPCYN--INAHCLSLTQSLSQSSTVESSFPNLNLGSDSVSSRFPFPKI 120

[Close]
BLAST of Lsi11G017090 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1 

Query: 18 NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDTAARQFRGAKA 77
          N +  E+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAARAYD+AAR  RG KA
Sbjct: 20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKA 79

Query: 78 KTNFPL 84
          KTNFP+
Sbjct: 80 KTNFPI 85

[Close]
BLAST of Lsi11G017090 vs. NCBI nr
Match: gi|659110551|ref|XP_008455284.1| (PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 1.3e-98
Identity = 189/224 (84.38%), Postives = 199/224 (88.84%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 60
           MV+KEKS+ ++ PSLS NNNG +LHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE
Sbjct: 33  MVAKEKSSPQQPPSLS-NNNGKDLHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 92

Query: 61  AARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPE 120
           AARAYDTAARQFRGAKAKTNFP PDELIDVSP KINQSPSPSSTVDSSSSSS EKTPSPE
Sbjct: 93  AARAYDTAARQFRGAKAKTNFPPPDELIDVSPHKINQSPSPSSTVDSSSSSSHEKTPSPE 152

Query: 121 IVRGYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDS 180
           I R YGVGRTFPFIQPQFLH          GGG VRPVLF+D FG+PEFVAHGYP+RFD 
Sbjct: 153 ISRSYGVGRTFPFIQPQFLH---------GGGGSVRPVLFVDVFGKPEFVAHGYPIRFDP 212

Query: 181 ATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVDA 225
           ATVDLT+RF GGIQSDS+SSSLVD RP KEILNLDLNLAPPVDA
Sbjct: 213 ATVDLTSRFTGGIQSDSNSSSLVDFRPAKEILNLDLNLAPPVDA 246

[Close]
BLAST of Lsi11G017090 vs. NCBI nr
Match: gi|559783566|gb|AHB18381.1| (ethylene-responsive transcription factor [Momordica charantia])

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-97
Identity = 192/231 (83.12%), Postives = 202/231 (87.45%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 60
           MV++EKSTAKKL + SNN  G ELHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEE
Sbjct: 1   MVAREKSTAKKLTATSNN--GRELHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEE 60

Query: 61  AARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPE 120
           AARAYDTAARQFRGAKAKTNFPLP+ELI+VSP KIN SPS SSTV+SSSSSSQEK+PS E
Sbjct: 61  AARAYDTAARQFRGAKAKTNFPLPEELIEVSPHKINHSPSASSTVESSSSSSQEKSPSSE 120

Query: 121 IVRGYG----VGRTFPFIQPQFLHQ--VACNASAVSGGGGVRPVLFMDAFGRPEFVAHGY 180
           I RGYG     GRTFPFIQPQF  Q  V CNASA +     RPVLFMDAFGRPEFVAHGY
Sbjct: 121 IFRGYGGALNAGRTFPFIQPQFQPQVMVGCNASASAAAANARPVLFMDAFGRPEFVAHGY 180

Query: 181 PLRFDSATVDLTARFAGGI-QSDSDSSSLVDCRPGKEILNLDLNLAPPVDA 225
           PLRFD ATVDLTARFAGGI QSDSDSSS+VDCRP KEILNLDLNLAPPVDA
Sbjct: 181 PLRFDPATVDLTARFAGGIHQSDSDSSSVVDCRPAKEILNLDLNLAPPVDA 229

[Close]
BLAST of Lsi11G017090 vs. NCBI nr
Match: gi|449438123|ref|XP_004136839.1| (PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 2.2e-90
Identity = 176/224 (78.57%), Postives = 190/224 (84.82%), Query Frame = 1 

Query: 1   MVSKEKSTAKKLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEE 60
           MV+ +KS    LPSLSNNN   +LHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDTAEE
Sbjct: 1   MVANQKS----LPSLSNNN-AKDLHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEE 60

Query: 61  AARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTPSPE 120
           AARAYDTAARQFRGAKAKTNFPLPD+ IDVSP   NQSPSP+ST+DSSSSS+ EKTPSPE
Sbjct: 61  AARAYDTAARQFRGAKAKTNFPLPDDFIDVSPHNTNQSPSPTSTLDSSSSSTHEKTPSPE 120

Query: 121 IVRGYGVGRTFPFIQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYPLRFDS 180
           I R YGVGRTFPFIQPQFLH          GGG VRP+LF D +GR EFVAHGYP+RFD 
Sbjct: 121 IARSYGVGRTFPFIQPQFLH----------GGGTVRPLLFTDVYGRAEFVAHGYPIRFDP 180

Query: 181 ATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVDA 225
           ATVDLT+RF GGIQ+D++SSSLVD RP KEILNLDLNLAPPVDA
Sbjct: 181 ATVDLTSRFTGGIQTDTNSSSLVDFRPAKEILNLDLNLAPPVDA 209

[Close]
BLAST of Lsi11G017090 vs. NCBI nr
Match: gi|388502912|gb|AFK39522.1| (unknown [Lotus japonicus])

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-55
Identity = 139/248 (56.05%), Postives = 163/248 (65.73%), Query Frame = 1 

Query: 2   VSKEKSTAKKLPSLSN-------NNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGT 61
           V+K ++TA    ++S        +NN  E+HFRGVRKRPWGRY+AEIRDPGKKSRVWLGT
Sbjct: 10  VTKARNTAAATTAVSAKSKIHKPSNNATEVHFRGVRKRPWGRYSAEIRDPGKKSRVWLGT 69

Query: 62  FDTAEEAARAYDTAARQFRGAKAKTNFPL---------PDELIDVSPQKINQSPSPSSTV 121
           FDTAEEAARAYD AARQFRG KAKTNFP          P++++ V+  K NQSPS SSTV
Sbjct: 70  FDTAEEAARAYDAAARQFRGPKAKTNFPQSPSPDNNTGPNDVV-VANVKANQSPSQSSTV 129

Query: 122 DSSSSSSQEKTPSPEIVRGYG-VGRTFPF--IQPQFLHQVACNASAVSGGGG------VR 181
           +SS       TP  +I RG G V   FPF  + PQ L          SGGG       VR
Sbjct: 130 ESS-------TPERDITRGGGVVVDRFPFLPLHPQQL-------MPFSGGGDVVYTAPVR 189

Query: 182 PVLFMDAFGRPEFVAHGYPLRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDL 225
           PV+F+D   + EF A  +P+RF+S  VD T  F GGIQSDSDSSS+VDCRP K  LNLDL
Sbjct: 190 PVIFLDPASQAEFFAQRFPVRFESGPVDFTGMFGGGIQSDSDSSSVVDCRP-KPTLNLDL 241

[Close]
BLAST of Lsi11G017090 vs. NCBI nr
Match: gi|357474423|ref|XP_003607496.1| (ethylene response factor [Medicago truncatula])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53
Identity = 131/228 (57.46%), Postives = 149/228 (65.35%), Query Frame = 1 

Query: 1   MVSKEKSTAK---KLPSLSNNNNGNELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60
           MV+K K+ A    K PS +NNNN  E+HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT
Sbjct: 1   MVTKTKNAANLKIKKPS-NNNNNATEIHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 60

Query: 61  AEEAARAYDTAARQFRGAKAKTNFPLPDELIDVSPQKINQSPSPSSTVDSSSSSSQEKTP 120
           AEEAARAYD AARQFRG KAKTNFP P    DV       SPS SSTV+SS  +   +  
Sbjct: 61  AEEAARAYDNAARQFRGPKAKTNFPPPPS--DVK----EDSPSQSSTVESSVPAPDREVT 120

Query: 121 SPEIVRGYGVGRTFPF--IQPQFLHQVACNASAVSGGGGVRPVLFMDAFGRPEFVAHGYP 180
             E+  G  V   FPF  IQ Q +      A AV    G+ PV F D  GR EF+   + 
Sbjct: 121 RREVPTGGSVMDRFPFLSIQQQIMPFAGAGAGAVD---GMVPVFFYDPAGRAEFLNQRFT 180

Query: 181 LRFDSATVDLTARFAGGIQSDSDSSSLVDCRPGKEILNLDLNLAPPVD 224
            RF+   V     F GG+QSDSDSSS+VDC+P K  LNLDLNLAPP++
Sbjct: 181 NRFEPEPVQFNIGFGGGVQSDSDSSSVVDCQP-KRALNLDLNLAPPME 217

The following BLAST results are available for this feature:
BLAST of Lsi11G017090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF78_ARATH5.5e-4149.57Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 ... [more]
ERF4_NICSY4.1e-3645.83Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 ... [more]
ERF4_TOBAC3.5e-3546.98Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=... [more]
ERF80_ARATH1.1e-3346.80Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 ... [more]
ERF79_ARATH2.7e-2739.73Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 ... [more]
BLAST of Lsi11G017090 vs. TrEMBL
Match NameE-valueIdentityDescription
V5QP37_MOMCH2.2e-9783.12Ethylene-responsive transcription factor OS=Momordica charantia PE=2 SV=1[more]
A0A0A0K742_CUCSA1.5e-9078.57Ethylene-responsive element-binding protein OS=Cucumis sativus GN=Csa_7G049230 P... [more]
I3SGY0_LOTJA1.6e-5556.05Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Q2I2S8_MEDTR8.9e-5457.46Ethylene response factor OS=Medicago truncatula GN=ERF-6 PE=2 SV=1[more]
V4U3I7_9ROSI6.0e-5051.06Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016276mg PE=4 SV=1[more]
BLAST of Lsi11G017090 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15210.13.1e-4249.57 ethylene responsive element binding factor 4[more]
AT5G44210.16.3e-3546.80 erf domain protein 9[more]
AT1G53170.11.5e-2839.73 ethylene response factor 8[more]
AT1G28370.13.1e-2661.82 ERF domain protein 11[more]
AT1G50640.11.0e-2477.27 ethylene responsive element binding factor 3[more]
BLAST of Lsi11G017090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110551|ref|XP_008455284.1|1.3e-9884.38PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 [Cucu... [more]
gi|559783566|gb|AHB18381.1|3.2e-9783.12ethylene-responsive transcription factor [Momordica charantia][more]
gi|449438123|ref|XP_004136839.1|2.2e-9078.57PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis sativus][more]
gi|388502912|gb|AFK39522.1|2.3e-5556.05unknown [Lotus japonicus][more]
gi|357474423|ref|XP_003607496.1|1.3e-5357.46ethylene response factor [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0042545 cell wall modification
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005618 cell wall
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G017090.1Lsi11G017090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 48..64
score: 4.4E-11coord: 26..37
score: 4.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 25..82
score: 1.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 25..74
score: 2.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 25..88
score: 2.6
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 25..82
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 25..83
score: 2.68
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 14..224
score: 3.3