CmoCh11G017140 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G017140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family, putative
Location	Cmo_Chr11 : 12155447 .. 12155743 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA

mRNA sequence

ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA

Coding sequence (CDS)

ATGGGTTTCCGTTTGCCTAGAATTGTTAATGCTAAGCAAAGTCCTCGACGATCTTCATTGTCTCGAAACGGAGCATCAGTGGTCGACGTTCCAAAGGGGTACTTTACAGTTTATGTTGGTGAAGAACAAAAGAAGCGTTTTGTCATTCCATTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGTAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGACCATTTCCTTGATGTCACTTGTAGCTTGAATGGCTCATGA

Homology

[Close]

BLAST of CmoCh11G017140 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.9e-28
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGASV--VDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I       R++S++ N AS   V+VPKGY  VYVG++  +RF+IP+SYLNQPS
Sbjct: 1  MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGDKM-RRFLIPVSYLNQPS 60

Query: 61 FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          FQDLL+Q EEEFGYDHPMGG+TIPC ED FL VT  LN
Sbjct: 61 FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

[Close]

BLAST of CmoCh11G017140 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.0e-27
Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQ 60
          MGFRLP I             R  ++ VD PKGY  VYVGE+ K RFVIP+SY+NQPSFQ
Sbjct: 1  MGFRLPGI-------------RKASNAVDAPKGYLAVYVGEKMK-RFVIPVSYMNQPSFQ 60

Query: 61 DLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          DLL+Q EEEFGYDHPMGG+TIPCSE+ F  +TC LN
Sbjct: 61 DLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCLN 82

[Close]

BLAST of CmoCh11G017140 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-26
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I       R++  +RN AS  V+D PKGY  VYVGE  K RFVIP+S+LNQP 
Sbjct: 1  MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQPL 60

Query: 61 FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          FQDLLSQ EEEFGYDHPMGG+TIPCSED F  +T  L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of CmoCh11G017140 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-26
Identity = 61/96 (63.54%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQ 60
          MGFRLP I             R  +   D PKGY  VYVGE+  KRFVIP+SYLNQPSFQ
Sbjct: 1  MGFRLPGI-------------RKASKAADAPKGYLAVYVGEKL-KRFVIPVSYLNQPSFQ 60

Query: 61 DLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          DLLSQ EEEFGYDHPMGG+TIPCSED F  +T  LN
Sbjct: 61 DLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of CmoCh11G017140 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.4e-26
Identity = 63/98 (64.29%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I       R++S S N AS   VDV KGY  VYVGE+  +RFVIP+SYLN+PS
Sbjct: 1  MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGEKM-RRFVIPVSYLNKPS 60

Query: 61 FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          FQDLLSQ EEEFGY HP GG+TIPCSED F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of CmoCh11G017140 vs. TrEMBL
Match: A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 84/100 (84.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS + NGAS  VVDVPKGYFTVYVGEE KKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKVVDVPKGYFTVYVGEEHKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPC ED FLD+T SLN S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCHEDEFLDLTQSLNES 100

[Close]

BLAST of CmoCh11G017140 vs. TrEMBL
Match: A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 8.7e-38
Identity = 81/100 (81.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS + NGAS   VDVPKGYF VY+GEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPC+E +FLD+T SLN S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of CmoCh11G017140 vs. TrEMBL
Match: A0A0A0K160_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-37
Identity = 83/100 (83.00%), Postives = 87/100 (87.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV +KQS +RSS + NG S   VDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTSKQSLQRSSSTGNGESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPCSED FLDVT  LN S
Sbjct: 61  FQDLLSQSEEEFGYNHPMGGITIPCSEDCFLDVTERLNES 100

[Close]

BLAST of CmoCh11G017140 vs. TrEMBL
Match: A0A0A0K0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008960 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.3e-35
Identity = 79/102 (77.45%), Postives = 86/102 (84.31%), Query Frame = 1


Query: 1   MGFRLPRIVNAK--QSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQ 60
           MGFRLPRIV     QS +RSS +RNGAS    DVPKGYF VY+GEEQKKRFVIPLSYLNQ
Sbjct: 1   MGFRLPRIVTGTVTQSLQRSSSTRNGASPRANDVPKGYFAVYIGEEQKKRFVIPLSYLNQ 60

Query: 61  PSFQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           PSFQDLLSQ EEEFGY+HPMGGITIPC+E +FLD+T SLN S
Sbjct: 61  PSFQDLLSQAEEEFGYNHPMGGITIPCNEVYFLDLTRSLNDS 102

[Close]

BLAST of CmoCh11G017140 vs. TrEMBL
Match: A0A0A0K4J6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009030 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.9e-35
Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MGFRLPRIVNAKQSPRRSSLSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQ 60
          MGFRLPRIV AKQS RRSS + NG + VDVPKGYFTVYVG+ QKKRFVIPLSYLN+P+FQ
Sbjct: 1  MGFRLPRIVQAKQSLRRSSSTGNGTTAVDVPKGYFTVYVGDVQKKRFVIPLSYLNEPTFQ 60

Query: 61 DLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCS 95
          DLL+Q EEEFGYDHPMGGITI CSE+ FL +T S
Sbjct: 61 DLLNQAEEEFGYDHPMGGITISCSEELFLGLTQS 94

[Close]

BLAST of CmoCh11G017140 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-28
Identity = 57/99 (57.58%), Postives = 77/99 (77.78%), Query Frame = 1


Query: 1  MGFRLPRIV-NAKQSPRRSSL--SRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQP 60
          M  R+PR++ ++KQ  R++ L  S + +S +DVPKGY  VYVGE+  KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLN 97
          SFQDLL + EEEFG+DHPMGG+TIPCSE+ F+D+    N
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmoCh11G017140 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 20 LSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQVEEEFGYDHPMGGI 79
          LSR+ A+V   PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS+ EEEFG+DHPMGG+
Sbjct: 14 LSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGL 73

Query: 80 TIPCSEDHFLDVTCSLN 97
          TIPC ED F++VT  L+
Sbjct: 74 TIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmoCh11G017140 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 51/76 (67.11%), Postives = 63/76 (82.89%), Query Frame = 1


Query: 20 LSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQVEEEFGYDHPMGGI 79
          LSR+ A+V   PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS+ E+EFG+DHPMGG+
Sbjct: 14 LSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGL 73

Query: 80 TIPCSEDHFLDVTCSL 96
          TIPC ED F++VT  L
Sbjct: 74 TIPCHEDTFINVTSRL 89

[Close]

BLAST of CmoCh11G017140 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 5.8e-25
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1


Query: 20 LSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQVEEEFGYDHPMGGI 79
          LSR+  +    PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+ EEEFG+DHPMGG+
Sbjct: 14 LSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGL 73

Query: 80 TIPCSEDHFLDVT 93
          TIPC ED F++VT
Sbjct: 74 TIPCPEDTFINVT 86

[Close]

BLAST of CmoCh11G017140 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.8e-25
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 1


Query: 20 LSRNGASVVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQVEEEFGYDHPMGGI 79
          LSR+  +    PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+ EEEFG+DHPMGG+
Sbjct: 14 LSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGL 73

Query: 80 TIPCSEDHFLDVTCSL 96
          TIPC ED F++VT  L
Sbjct: 74 TIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh11G017140 vs. NCBI nr
Match: gi|778722830|ref|XP_004144905.2| (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38
Identity = 84/100 (84.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS + NGAS  VVDVPKGYFTVYVGEE KKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKVVDVPKGYFTVYVGEEHKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPC ED FLD+T SLN S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCHEDEFLDLTQSLNES 100

[Close]

BLAST of CmoCh11G017140 vs. NCBI nr
Match: gi|659094352|ref|XP_008448014.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 5.6e-38
Identity = 81/100 (81.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS + NGAS   +DVPKGYF VY+GEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EE+FGY+HPMGGITIPCSED+FLDVT  LN S
Sbjct: 61  FQDLLSQAEEKFGYNHPMGGITIPCSEDYFLDVTERLNDS 100

[Close]

BLAST of CmoCh11G017140 vs. NCBI nr
Match: gi|778722823|ref|XP_011658575.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 81/100 (81.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS + NGAS   VDVPKGYF VY+GEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPC+E +FLD+T SLN S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of CmoCh11G017140 vs. NCBI nr
Match: gi|659094356|ref|XP_008448016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 81/100 (81.00%), Postives = 86/100 (86.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV AKQS +RSS   NG S  +VDVPKGYF+VYVGEE KKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSKENGTSPKIVDVPKGYFSVYVGEEHKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPC ED FLD+T SLN S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCHEDEFLDLTRSLNES 100

[Close]

BLAST of CmoCh11G017140 vs. NCBI nr
Match: gi|778722820|ref|XP_011658574.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-37
Identity = 83/100 (83.00%), Postives = 87/100 (87.00%), Query Frame = 1


Query: 1   MGFRLPRIVNAKQSPRRSSLSRNGAS--VVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60
           MGFRLPRIV +KQS +RSS + NG S   VDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTSKQSLQRSSSTGNGESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLSQVEEEFGYDHPMGGITIPCSEDHFLDVTCSLNGS 99
           FQDLLSQ EEEFGY+HPMGGITIPCSED FLDVT  LN S
Sbjct: 61  FQDLLSQSEEEFGYNHPMGGITIPCSEDCFLDVTERLNES 100

The following BLAST results are available for this feature:

BLAST of CmoCh11G017140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX10A_SOYBN	6.9e-28	64.29	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
AXX15_SOYBN	2.0e-27	62.50	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
ARG7_VIGRR	1.7e-26	64.29	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
AX15A_SOYBN	2.2e-26	63.54	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
AX6B_SOYBN	6.4e-26	64.29	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh11G017140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5T8_CUCSA	1.0e-38	84.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1	[more]
A0A0A0K4J0_CUCSA	8.7e-38	81.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1	[more]
A0A0A0K160_CUCSA	1.5e-37	83.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1	[more]
A0A0A0K0H6_CUCSA	5.3e-35	77.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008960 PE=4 SV=1	[more]
A0A0A0K4J6_CUCSA	6.9e-35	78.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009030 PE=4 SV=1	[more]

BLAST of CmoCh11G017140 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.1e-28	57.58	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.4e-26	67.53	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	5.2e-26	67.11	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	5.8e-25	65.75	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	9.8e-25	64.47	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh11G017140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722830\|ref\|XP_004144905.2\|	1.5e-38	84.00	PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]	[more]
gi\|659094352\|ref\|XP_008448014.1\|	5.6e-38	81.00	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778722823\|ref\|XP_011658575.1\|	1.2e-37	81.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659094356\|ref\|XP_008448016.1\|	1.2e-37	81.00	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778722820\|ref\|XP_011658574.1\|	2.1e-37	83.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G017140.1	CmoCh11G017140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 8..95 score: 1.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..98 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G017140	Cucsa.381900	Cucumber (Gy14) v1	cgycmoB1049
CmoCh11G017140	CmaCh20G007920	Cucurbita maxima (Rimu)	cmacmoB542
CmoCh11G017140	Cla015857	Watermelon (97103) v1	cmowmB117
CmoCh11G017140	MELO3C013393	Melon (DHL92) v3.5.1	cmomeB091
CmoCh11G017140	CSPI07G00590	Wild cucumber (PI 183967)	cmocpiB131
CmoCh11G017140	MELO3C013393.2	Melon (DHL92) v3.6.1	cmomedB097

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G017140	Watermelon (97103) v2	cmowmbB094
CmoCh11G017140	Wax gourd	cmowgoB0115
CmoCh11G017140	Wax gourd	cmowgoB0128
CmoCh11G017140	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh11G017140	Cucurbita maxima (Rimu)	cmacmoB117
CmoCh11G017140	Cucurbita maxima (Rimu)	cmacmoB492
CmoCh11G017140	Cucumber (Chinese Long) v2	cmocuB132
CmoCh11G017140	Cucurbita pepo (Zucchini)	cmocpeB093
CmoCh11G017140	Cucurbita pepo (Zucchini)	cmocpeB099
CmoCh11G017140	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G017140	Cucurbita pepo (Zucchini)	cmocpeB131
CmoCh11G017140	Bottle gourd (USVL1VR-Ls)	cmolsiB073
CmoCh11G017140	Bottle gourd (USVL1VR-Ls)	cmolsiB080
CmoCh11G017140	Cucumber (Gy14) v2	cgybcmoB150
CmoCh11G017140	Cucumber (Gy14) v2	cgybcmoB877
CmoCh11G017140	Melon (DHL92) v3.6.1	cmomedB085
CmoCh11G017140	Melon (DHL92) v3.6.1	cmomedB120
CmoCh11G017140	Silver-seed gourd	carcmoB0432
CmoCh11G017140	Silver-seed gourd	carcmoB1365
CmoCh11G017140	Cucumber (Chinese Long) v3	cmocucB0094
CmoCh11G017140	Cucumber (Chinese Long) v3	cmocucB0113
CmoCh11G017140	Cucumber (Chinese Long) v3	cmocucB0155