Cla015857 (gene) Watermelon (97103) v1

NameCla015857
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin-induced SAUR-like protein (AHRD V1 ***- Q8S351_CAPAN); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein
LocationChr2 : 4189805 .. 4190107 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

mRNA sequence

ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

Coding sequence (CDS)

ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

Protein sequence

MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS
BLAST of Cla015857 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 57/98 (58.16%), Postives = 67/98 (68.37%), Query Frame = 1

Query: 1  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 60
          MG  L GI       ++T SA+    S V + PKG+ AVYVGE  K RFVIP+ +LN PL
Sbjct: 1  MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENMK-RFVIPVSHLNQPL 60

Query: 61 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN 99
          F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

BLAST of Cla015857 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 1

Query: 16 QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFD 75
          ++  S   G GSA    PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFD
Sbjct: 11 KKILSRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 76 HPMGGLTIPCSEDYFISLTSAL 98
          HPMGGLTIPC ED FI++TS L
Sbjct: 71 HPMGGLTIPCPEDTFINVTSRL 89

BLAST of Cla015857 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 1

Query: 27 SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCS 86
          +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC 
Sbjct: 19 AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCP 78

Query: 87 EDYFISLTSALN 99
          ED FI++TS L+
Sbjct: 79 EDTFINVTSRLH 90

BLAST of Cla015857 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1

Query: 27 SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCS 86
          +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +E+EFGFDHPMGGLTIPC 
Sbjct: 19 AAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCH 78

Query: 87 EDYFISLTSAL 98
          ED FI++TS L
Sbjct: 79 EDTFINVTSRL 89

BLAST of Cla015857 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-21
Identity = 55/98 (56.12%), Postives = 61/98 (62.24%), Query Frame = 1

Query: 1  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 60
          MG  L GI  A               S   + PKG+ AVYVGE + KRFVIP+ YLN P 
Sbjct: 1  MGFRLPGIRKA---------------SKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 61 FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN 99
          F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS LN
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

BLAST of Cla015857 vs. TrEMBL
Match: A0A0A0K174_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.8e-49
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

BLAST of Cla015857 vs. TrEMBL
Match: A0A061DYM5_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVT-NVPKGHFAVYVGETQKKRFVIPIWYLNHP 60
           MGI LTG+A+AKQKLQRT S + G   A T NVPKGH AVYVGE  +KRFVIPI YLNHP
Sbjct: 1   MGIQLTGLAHAKQKLQRTLSGRIGNALAATSNVPKGHIAVYVGEGNRKRFVIPITYLNHP 60

Query: 61  LFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           LF+DLLN AEEEFGF+HPMGGLTIPCSE+YFISLT+ LNCS
Sbjct: 61  LFQDLLNRAEEEFGFNHPMGGLTIPCSEEYFISLTTLLNCS 101

BLAST of Cla015857 vs. TrEMBL
Match: A0A067DMI5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-36
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKY--GIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L G A+AKQKLQRT SAK    + +   NVPKGH A+YVGE  +KRFVIPI YLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLF+DLLN+AEEEFGFDHPMGGLTIPCSE+YF+SLTS LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

BLAST of Cla015857 vs. TrEMBL
Match: V4SDA6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.7e-36
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKY--GIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L G A+AKQKLQRT SAK    + +   NVPKGH A+YVGE  +KRFVIPI YLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLF+DLLN+AEEEFGFDHPMGGLTIPCSE+YF+SLTS LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

BLAST of Cla015857 vs. TrEMBL
Match: A0A0D2N5V5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G251000 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.4e-36
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 60
           MGI LTG+A AKQKLQRT S + G     TNVPKGH AVYVGE+ KKRFVIPI YLNHPL
Sbjct: 1   MGIQLTGLAQAKQKLQRTLSGRLGN----TNVPKGHIAVYVGESNKKRFVIPIAYLNHPL 60

Query: 61  FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           F+DLLN  EEEFGF+HPMGGLTIPCSE+YFISLT++LNCS
Sbjct: 61  FQDLLNKVEEEFGFNHPMGGLTIPCSEEYFISLTTSLNCS 96

BLAST of Cla015857 vs. NCBI nr
Match: gi|778722863|ref|XP_011658585.1| (PREDICTED: auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

BLAST of Cla015857 vs. NCBI nr
Match: gi|659094328|ref|XP_008448001.1| (PREDICTED: auxin-induced protein 15A [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFVIPIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 102

BLAST of Cla015857 vs. NCBI nr
Match: gi|694353712|ref|XP_009358224.1| (PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri])

HSP 1 Score: 165.2 bits (417), Expect = 5.7e-38
Identity = 82/102 (80.39%), Postives = 87/102 (85.29%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIG--SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L GIA+AKQKLQRT SA+YG    S  T VPKGHFAVYVGE +KKRFVIPI YLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADSTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLF+DLLN AEEEFG+DHP GGLTIPCSEDYFISLTS LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFISLTSCLNCS 102

BLAST of Cla015857 vs. NCBI nr
Match: gi|658049775|ref|XP_008360591.1| (PREDICTED: auxin-induced protein 15A-like [Malus domestica])

HSP 1 Score: 162.2 bits (409), Expect = 4.8e-37
Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGS--AVTNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L GIA+AKQKLQRT SA+YG  +    T VPKGHFAVYVGE +KKRFVIPI YLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADNTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           PLF+DLLN AEEEFG+DHP GGLTIPCSEDYF+SL+S LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFVSLSSCLNCS 102

BLAST of Cla015857 vs. NCBI nr
Match: gi|590684922|ref|XP_007041969.1| (SAUR-like auxin-responsive protein family [Theobroma cacao])

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-36
Identity = 78/101 (77.23%), Postives = 86/101 (85.15%), Query Frame = 1

Query: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVT-NVPKGHFAVYVGETQKKRFVIPIWYLNHP 60
           MGI LTG+A+AKQKLQRT S + G   A T NVPKGH AVYVGE  +KRFVIPI YLNHP
Sbjct: 1   MGIQLTGLAHAKQKLQRTLSGRIGNALAATSNVPKGHIAVYVGEGNRKRFVIPITYLNHP 60

Query: 61  LFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 101
           LF+DLLN AEEEFGF+HPMGGLTIPCSE+YFISLT+ LNCS
Sbjct: 61  LFQDLLNRAEEEFGFNHPMGGLTIPCSEEYFISLTTLLNCS 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ARG7_VIGRR3.0e-2358.16Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ... [more]
SAU24_ARATH1.3e-2160.98Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1[more]
SAU23_ARATH2.2e-2165.28Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1[more]
SAU22_ARATH3.7e-2164.79Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1[more]
AX15A_SOYBN3.7e-2156.12Auxin-induced protein 15A OS=Glycine max PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K174_CUCSA3.8e-4995.10Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1[more]
A0A061DYM5_THECC2.9e-3677.23SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 ... [more]
A0A067DMI5_CITSI3.7e-3674.51Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1[more]
V4SDA6_9ROSI3.7e-3674.51Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1[more]
A0A0D2N5V5_GOSRA6.4e-3677.00Uncharacterized protein OS=Gossypium raimondii GN=B456_005G251000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778722863|ref|XP_011658585.1|5.5e-4995.10PREDICTED: auxin-induced protein 15A [Cucumis sativus][more]
gi|659094328|ref|XP_008448001.1|2.1e-4895.10PREDICTED: auxin-induced protein 15A [Cucumis melo][more]
gi|694353712|ref|XP_009358224.1|5.7e-3880.39PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri][more]
gi|658049775|ref|XP_008360591.1|4.8e-3777.45PREDICTED: auxin-induced protein 15A-like [Malus domestica][more]
gi|590684922|ref|XP_007041969.1|4.1e-3677.23SAUR-like auxin-responsive protein family [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015857Cla015857.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 18..96
score: 3.2
NoneNo IPR availablePANTHERPTHR31929FAMILY NOT NAMEDcoord: 2..100
score: 1.3
NoneNo IPR availablePANTHERPTHR31929:SF10SUBFAMILY NOT NAMEDcoord: 2..100
score: 1.3

The following gene(s) are paralogous to this gene:

None