MELO3C013385 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013385
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	SAUR-like auxin-responsive protein family
Location	chr1 : 16321479 .. 16321944 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACACTCACTCACTCACTCAACTCAAAGTACCATAACAAGTCCTTTCAAATCCAGTTCAAAAGGCAATTCAAAACAGGGGATCTTTCTTTGTTGTAAAGCATACAGATATGGGAATTCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAAAGAACATTCTCGGGGAAATACGGGATTGGATCGGCGGTGACGACGAATAATGTTCCTAAAGGACATTTTGCAGTTTATGTAGGAGAAACACAGAAGAAGAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGTTAAACCTTGCGGAAGAGGAATTTGGATTCGATCATCCAACGGGTGGACTTACGATTCCTTGCACTGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATAAATCCATTTGGAATTTCAATTTTTTCTTCTTCTTCTTCTTCTTCATCA

mRNA sequence

ACAACACTCACTCACTCACTCAACTCAAAGTACCATAACAAGTCCTTTCAAATCCAGTTCAAAAGGCAATTCAAAACAGGGGATCTTTCTTTGTTGTAAAGCATACAGATATGGGAATTCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAAAGAACATTCTCGGGGAAATACGGGATTGGATCGGCGGTGACGACGAATAATGTTCCTAAAGGACATTTTGCAGTTTATGTAGGAGAAACACAGAAGAAGAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGTTAAACCTTGCGGAAGAGGAATTTGGATTCGATCATCCAACGGGTGGACTTACGATTCCTTGCACTGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATAAATCCATTTGGAATTTCAATTTTTTCTTCTTCTTCTTCTTCTTCATCA

Coding sequence (CDS)

ATGGGAATTCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAAAGAACATTCTCGGGGAAATACGGGATTGGATCGGCGGTGACGACGAATAATGTTCCTAAAGGACATTTTGCAGTTTATGTAGGAGAAACACAGAAGAAGAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGTTAAACCTTGCGGAAGAGGAATTTGGATTCGATCATCCAACGGGTGGACTTACGATTCCTTGCACTGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATAA

Protein sequence

MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS*

Homology

[Close]

BLAST of MELO3C013385 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 1


Query: 15  LQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEF 74
           L R+  G   I S  T +  PKG  AVYVGE+QKKR+++P+ YL+ P F+ LL+ +EEEF
Sbjct: 3   LVRSLLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEF 62

Query: 75  GFDHPTGGLTIPCTEDYFISLTSAL 100
           GFDHP GGLTIPC ED FI++TS L
Sbjct: 63  GFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of MELO3C013385 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 1


Query: 27  SAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPTGGLTIP 86
           SA   +  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHP GGLTIP
Sbjct: 17  SAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIP 76

Query: 87  CTEDYFISLTSALN 101
           C ED FI++TS L+
Sbjct: 77  CPEDTFINVTSRLH 90

[Close]

BLAST of MELO3C013385 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 1


Query: 16  QRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFG 75
           ++  S   G GSA      PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFG
Sbjct: 11  KKILSRSTGAGSAA-----PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFG 70

Query: 76  FDHPTGGLTIPCTEDYFISLTSAL 100
           FDHP GGLTIPC ED FI++TS L
Sbjct: 71  FDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of MELO3C013385 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-20
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 1


Query: 24  GIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPTGGL 83
           GI  A    + PKG+ AVYVGE + KRFVIP+ YLN P F+DLL+ AEEEFG+DHP GGL
Sbjct: 7   GIRKASKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGL 66

Query: 84  TIPCTEDYFISLTSALN 101
           TIPC+ED F  +TS LN
Sbjct: 67  TIPCSEDVFQCITSCLN 82

[Close]

BLAST of MELO3C013385 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-20
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MG  L GI       ++T S +    S V   + PKG+ AVYVGE  K RFVIP+ +LN 
Sbjct: 1   MGFRLPGI-------RKTLSARNEASSKVL--DAPKGYLAVYVGENMK-RFVIPVSHLNQ 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALN 101
           PLF+DLL+ AEEEFG+DHP GGLTIPC+ED F  +TS L+
Sbjct: 61  PLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of MELO3C013385 vs. TrEMBL
Match: A0A0A0K174_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.2e-52
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLFKDLLNLAEEEFGFDHP GGLTIPCTEDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of MELO3C013385 vs. TrEMBL
Match: W9QKX1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000889 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.0e-37
Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYG-IGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLN 60
           MGI L GI  AK KLQRT S +YG + SA +T++VPKGHFAVYVGE +KKRFVIPI YLN
Sbjct: 1   MGIRLKGITQAKHKLQRTLSARYGTLVSATSTHDVPKGHFAVYVGEAEKKRFVIPISYLN 60

Query: 61  HPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           HPLF+DLLN AEEEFGFDHPTGGL+IPC+EDYF SLTSAL+CS
Sbjct: 61  HPLFQDLLNRAEEEFGFDHPTGGLSIPCSEDYFSSLTSALSCS 103

[Close]

BLAST of MELO3C013385 vs. TrEMBL
Match: A0A067DMI5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.9e-37
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L G A+AKQKLQRT S K  +  A  TNNVPKGH A+YVGE  +KRFVIPI YLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLF+DLLN+AEEEFGFDHP GGLTIPC+E+YF+SLTS LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

[Close]

BLAST of MELO3C013385 vs. TrEMBL
Match: V4SDA6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.9e-37
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L G A+AKQKLQRT S K  +  A  TNNVPKGH A+YVGE  +KRFVIPI YLNH
Sbjct: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLF+DLLN+AEEEFGFDHP GGLTIPC+E+YF+SLTS LNCS
Sbjct: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102

[Close]

BLAST of MELO3C013385 vs. TrEMBL
Match: A0A061DYM5_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.8e-36
Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI LTG+A+AKQKLQRT SG+ G  +   T+NVPKGH AVYVGE  +KRFVIPI YLNH
Sbjct: 1   MGIQLTGLAHAKQKLQRTLSGRIG-NALAATSNVPKGHIAVYVGEGNRKRFVIPITYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLF+DLLN AEEEFGF+HP GGLTIPC+E+YFISLT+ LNCS
Sbjct: 61  PLFQDLLNRAEEEFGFNHPMGGLTIPCSEEYFISLTTLLNCS 101

[Close]

BLAST of MELO3C013385 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 141.0 bits (354), Expect = 4.2e-34
Identity = 73/104 (70.19%), Postives = 80/104 (76.92%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVT-TNNVPKGHFAVYVGET-QKKRFVIPIWYL 60
           MGI L G++ AKQKLQR+ S +     A + TNNVPKGH AVYVGET  +KRFVIPI YL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61  NHPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           NHPLF+ LLNLAEEEFGFDHP GGLTIPCTEDYF +L S L+ S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of MELO3C013385 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 4.3e-23
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNV--PKGHFAVYVGET-QKKRFVIPIWY 60
           M I ++ +  + ++L ++ S         ++NNV  PKGH AVYVGE  QK+RFV+P+ Y
Sbjct: 1   MAIRISRVLQSSKQLLKSLSH--------SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTY 60

Query: 61  LNHPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           L+HP F+ LL  AEEEFGFDHP GGLTIPCTE  FI L S L+ S
Sbjct: 61  LSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of MELO3C013385 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-22
Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 1


Query: 1   MGIHLTGIANA-KQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGET---QKKRFVIPIW 60
           MG+    I+NA KQ L+          S+ ++++VPKGH AVYVGE    +KKRFV+PI 
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSA 99
           +LNHP FK+ L+ AEEEFGF+HP GGLTIPC E+ F+ L ++
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIAS 102

[Close]

BLAST of MELO3C013385 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 4.8e-22
Identity = 52/103 (50.49%), Postives = 64/103 (62.14%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQ--KKRFVIPIWYL 60
           M I L+ + N+KQ  ++              + VPKGH AVYVGE    KKRFV+PI YL
Sbjct: 1   MAIRLSRVINSKQSQKQQ-------------SRVPKGHVAVYVGEEMESKKRFVVPISYL 60

Query: 61  NHPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNC 102
           NHP F+ LL+ AEEEFGF+HP GGLTIPC E+ F+ L ++  C
Sbjct: 61  NHPSFQGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNSYGC 90

[Close]

BLAST of MELO3C013385 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.5 bits (249), Expect = 6.3e-22
Identity = 49/85 (57.65%), Postives = 60/85 (70.59%), Query Frame = 1


Query: 15  LQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEF 74
           L R+  G   I S  T +  PKG  AVYVGE+QKKR+++P+ YL+ P F+ LL+ +EEEF
Sbjct: 3   LVRSLLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEF 62

Query: 75  GFDHPTGGLTIPCTEDYFISLTSAL 100
           GFDHP GGLTIPC ED FI++TS L
Sbjct: 63  GFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of MELO3C013385 vs. NCBI nr
Match: gi|659094328|ref|XP_008448001.1| (PREDICTED: auxin-induced protein 15A [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-53
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of MELO3C013385 vs. NCBI nr
Match: gi|778722863|ref|XP_011658585.1| (PREDICTED: auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-52
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLFKDLLNLAEEEFGFDHP GGLTIPCTEDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of MELO3C013385 vs. NCBI nr
Match: gi|694353712|ref|XP_009358224.1| (PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri])

HSP 1 Score: 168.3 bits (425), Expect = 7.0e-39
Identity = 80/102 (78.43%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L GIA+AKQKLQRT S +YG  +  T+  VPKGHFAVYVGE +KKRFVIPI YLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADSTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLF+DLLN AEEEFG+DHPTGGLTIPC+EDYFISLTS LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFISLTSCLNCS 102

[Close]

BLAST of MELO3C013385 vs. NCBI nr
Match: gi|658049775|ref|XP_008360591.1| (PREDICTED: auxin-induced protein 15A-like [Malus domestica])

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-38
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60
           MGI L GIA+AKQKLQRT S +YG  +  T+  VPKGHFAVYVGE +KKRFVIPI YLNH
Sbjct: 1   MGIKLMGIAHAKQKLQRTLSARYGSAADNTSTEVPKGHFAVYVGEDEKKRFVIPISYLNH 60

Query: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           PLF+DLLN AEEEFG+DHPTGGLTIPC+EDYF+SL+S LNCS
Sbjct: 61  PLFQDLLNKAEEEFGYDHPTGGLTIPCSEDYFVSLSSCLNCS 102

[Close]

BLAST of MELO3C013385 vs. NCBI nr
Match: gi|703062252|ref|XP_010086682.1| (hypothetical protein L484_000889 [Morus notabilis])

HSP 1 Score: 162.9 bits (411), Expect = 2.9e-37
Identity = 79/103 (76.70%), Postives = 89/103 (86.41%), Query Frame = 1


Query: 1   MGIHLTGIANAKQKLQRTFSGKYG-IGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLN 60
           MGI L GI  AK KLQRT S +YG + SA +T++VPKGHFAVYVGE +KKRFVIPI YLN
Sbjct: 1   MGIRLKGITQAKHKLQRTLSARYGTLVSATSTHDVPKGHFAVYVGEAEKKRFVIPISYLN 60

Query: 61  HPLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 103
           HPLF+DLLN AEEEFGFDHPTGGL+IPC+EDYF SLTSAL+CS
Sbjct: 61  HPLFQDLLNRAEEEFGFDHPTGGLSIPCSEDYFSSLTSALSCS 103

The following BLAST results are available for this feature:

BLAST of MELO3C013385 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU21_ARATH	1.1e-20	57.65	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	1.5e-20	62.16	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	1.5e-20	58.33	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
AX15A_SOYBN	1.9e-20	63.64	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]
ARG7_VIGRR	3.2e-20	54.00	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]

BLAST of MELO3C013385 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K174_CUCSA	2.2e-52	98.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009140 PE=4 SV=1	[more]
W9QKX1_9ROSA	2.0e-37	76.70	Uncharacterized protein OS=Morus notabilis GN=L484_000889 PE=4 SV=1	[more]
A0A067DMI5_CITSI	5.9e-37	74.51	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040912mg PE=4 SV=1	[more]
V4SDA6_9ROSI	5.9e-37	74.51	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030043mg PE=4 SV=1	[more]
A0A061DYM5_THECC	3.8e-36	74.51	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006733 PE=4 ...	[more]

BLAST of MELO3C013385 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34770.1	4.2e-34	70.19	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	4.3e-23	52.38	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.8e-22	51.96	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	4.8e-22	50.49	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	6.3e-22	57.65	SAUR-like auxin-responsive protein family	[more]

BLAST of MELO3C013385 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094328\|ref\|XP_008448001.1\|	5.0e-53	100.00	PREDICTED: auxin-induced protein 15A [Cucumis melo]	[more]
gi\|778722863\|ref\|XP_011658585.1\|	3.2e-52	98.04	PREDICTED: auxin-induced protein 15A [Cucumis sativus]	[more]
gi\|694353712\|ref\|XP_009358224.1\|	7.0e-39	78.43	PREDICTED: auxin-induced protein 15A-like [Pyrus x bretschneideri]	[more]
gi\|658049775\|ref\|XP_008360591.1\|	3.5e-38	76.47	PREDICTED: auxin-induced protein 15A-like [Malus domestica]	[more]
gi\|703062252\|ref\|XP_010086682.1\|	2.9e-37	76.70	hypothetical protein L484_000889 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013385T1	MELO3C013385T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 29..98 score: 9.8
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..102 score: 4.2
None	No IPR available	PANTHER	PTHR31929:SF10	SUBFAMILY NOT NAMED	coord: 2..102 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013385	Csa7G009140	Cucumber (Chinese Long) v2	cumeB531
MELO3C013385	Cla015857	Watermelon (97103) v1	mewmB239
MELO3C013385	Cla97C02G031220	Watermelon (97103) v2	mewmbB179
MELO3C013385	Bhi10G001517	Wax gourd	mewgoB231
MELO3C013385	Bhi05G001508	Wax gourd	mewgoB213
MELO3C013385	Cucsa.381900	Cucumber (Gy14) v1	cgymeB622
MELO3C013385	CmaCh11G014040	Cucurbita maxima (Rimu)	cmameB092
MELO3C013385	CmaCh19G007120	Cucurbita maxima (Rimu)	cmameB462
MELO3C013385	Lsi11G011730	Bottle gourd (USVL1VR-Ls)	lsimeB096
MELO3C013385	Cp4.1LG05g13060	Cucurbita pepo (Zucchini)	cpemeB684
MELO3C013385	Cp4.1LG16g02890	Cucurbita pepo (Zucchini)	cpemeB272
MELO3C013385	Carg04001	Silver-seed gourd	carmeB0952
MELO3C013385	CsaV3_7G000710	Cucumber (Chinese Long) v3	cucmeB549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013385	Melon (DHL92) v3.5.1	memeB038
MELO3C013385	Cucumber (Gy14) v1	cgymeB302
MELO3C013385	Cucurbita maxima (Rimu)	cmameB510
MELO3C013385	Cucurbita maxima (Rimu)	cmameB563
MELO3C013385	Cucurbita moschata (Rifu)	cmomeB091
MELO3C013385	Cucurbita moschata (Rifu)	cmomeB453
MELO3C013385	Cucurbita moschata (Rifu)	cmomeB503
MELO3C013385	Cucurbita moschata (Rifu)	cmomeB552
MELO3C013385	Wild cucumber (PI 183967)	cpimeB102
MELO3C013385	Wild cucumber (PI 183967)	cpimeB539
MELO3C013385	Watermelon (Charleston Gray)	mewcgB190
MELO3C013385	Watermelon (Charleston Gray)	mewcgB196
MELO3C013385	Watermelon (97103) v1	mewmB252
MELO3C013385	Cucurbita pepo (Zucchini)	cpemeB224
MELO3C013385	Cucurbita pepo (Zucchini)	cpemeB610
MELO3C013385	Bottle gourd (USVL1VR-Ls)	lsimeB064
MELO3C013385	Cucumber (Gy14) v2	cgybmeB088
MELO3C013385	Cucumber (Gy14) v2	cgybmeB092
MELO3C013385	Cucumber (Gy14) v2	cgybmeB469
MELO3C013385	Silver-seed gourd	carmeB0321
MELO3C013385	Silver-seed gourd	carmeB0988
MELO3C013385	Cucumber (Chinese Long) v3	cucmeB106
MELO3C013385	Watermelon (97103) v2	mewmbB176