CmoCh11G012070 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G012070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRibosomal protein L10 family protein
LocationCmo_Chr11 : 7135203 .. 7139252 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAACCTTCTTTACGCCCTCACCCAGCCGCATCACTCACTTTTATCGCCGCTTCCTTCTACGCCCGGTAAGCCCTCCCTCGCCCAATCCGGTAACCCTCGTTCTTCCTCTATCTTTCTCCCTCACGTAACTTACGAATCTGCCGTCGTAAAGCAGGTACCGAAGTTATTTGCAGCGATCAAAGATGCCCAAGTCGAAGCGTGATAGACCAGGTCCGTTTTCATCGCTTTGCTCATATTCATGCCTAAATCGCTCTTCTTTTCGATACTTAGAAAAAATTTGGTATTTGTTAGGGTAGGTATTGTTTAGGTTTGAGATGATATTGATATCTCTTCACCAGTAATTGAGAGATTTCACACTTGTATCTTCGTTCATACGGTAGTCCTACATGTTCATAGTACGTTTCCTGGTAGGTCAGATTTACGAAAGAATTTTGATTACTCAGTATGTTAGCTCCATATTTTTCTTCTAAGGTTCTTCCAAGTTCTAAAGAAGTATGCACTGTGTTACTTGAGCAAACATTTCAAGAGTGTGGAATTTGTGGGGATATCCTATTAGTGGGTTGGTTACAACTTGATGTCTGTGTTTGTTAAAATTTGAGGAATAACTTGAGTATCTATTGTGTTAGGCTGAGGTAGACAGGGTTGTAGACAAGCCTCAAGCACGTTTTCGCTGATTGTAGGAGTGGCTGTAGTTTGCCTCCGAAGTTAGATTGAGCTTTATAGTGTGATGGAAGAGCCATTGTAGTATAAGGTGTTTCCAAGGGGTGGCTGAGGTGAAAGGTTTCTATCTATATGCAAAACGTAGAGTTGCTTACAACACAGGGAGCTAAAGTTAAACACTGAGATCAATTTTTTAAATAAGAATAAGGAATATTTTTAGTAGGGTAATGAATGTTGTTAAAGAGAAACCAAACTGTGAATCTGGTTGAACTTAATGACTGCTTTAACATTAGAAATATGCTTAAATTTGTTATTTTAATTCGAGGTTTTTGTTAAACTATGGGCTAGTCTGTCTGAGATATGTTCTTGTCAAAATTACTATGCAATTTAAGAATTTTAATGACATGTGGTCGTTGTATTCAGTGTCAAATATGTGTGGGTTTTTAGTTAATAGAGGAAAAATTCAACAATTCAGTCTACTGTCAACTGTTTTGACTAATTGTTTGCTGTTTGATGGGATAAATGCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTAATCAGGCAGGCTGTGGAAAATTACAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAACTAAAGTCGTCTAGCAGGCAAGTTGTATTTTCTGACTTTTTTTATTGTATATTTTCTGCATCACTTCAAATATTAATTAGTGATGAGAATGTTACTTCCTATATATTGTTTGATTTGTGTTTTGTTGGAAGAAAGGAGAAAATGAAAATATTGAATGGCATGTTTTAGAACTTGAATAAAAATGAATGGCATGTTCTAGGAGAAAGGATGAGACCATTTGGTAACAGGTTATGGTAACAGCATTGCTTTATGATCCTAAATGTAGTATCTGTTGATATGATTACAGAGCAACCTTCTGTCCTTGTTTTAAGAAGCGTCAATCAAAAAAGGTTTACAACCTTCATCGTCCTTCTTCCCCTTGTGCTTGACATGGTCTCACCTGGGGCTGCAGCTTGTATATATTTGTTCTCTTTATTCTTTTTCCCTTTTTAAGCATGAATGATATGAAAATTATATTAACTCACCTTGGAATTATATTTTAGCCGTACATTATTGTATTTGGCCTCTGATCCTTGTCTACATTTTTGAAGTGTAGAAATGTTTAAGCCTCTGGTCACTAATTTGGATATTTTGTTTGTGAACTTTGTTTAGTGCAATTTTTGAAATGATGCTGCAGTTGAGTGGCACTCTCTCTATTTCTCTAATGAAATGATTGTGACCTTATCTGACCTGACTGTACCTTACATGGATTCCCAAATTGATTTTCTTTTCTCTCATGGATAGATTGTTTTTTGGAGCAAACAAAGTCATGCAGGTTTCTCTTGGTCGAACTGCTTCCGATGAGATTCAACCAGGCCTATACAAGGTTTCTAAGGTGAACCACTTTTTCCATATTGCATATAATTCAAGTGCTCTTTTTCTTTGTAGCCTTAAGGAATTAACATCCACTCTTCTATTTTTCAGCTTCTGCATGGCAATACTGGACTTTGTTTCACAAACTTACCGAAAGAAGAGGTTGAGAGGTAAACCAGTTATGCTCTAGTTTTAACATTGGCAAGCACCGCCAAAAGTGATGAATTGTTAAGTTGCTATTTTGTTTTACAATTTAAATGCACATATTTAAAATTTATTCATTATGCGTTCTTTTTTTTGTTTAGAAATTGAAGTATCTGATAAATTGTAGTTTCAGTTGATTTCCATATCTATGAATACAACATTCTGAAGTTTTGATTTGGGAAAGACTGTTAAAAGTGAACATAATTATTTTGGTGTTGGAAAGAACAAAAAAGAAAATGTTAAATCCTTGAAGTTGAAGTTTTAAAAAATTGAAACTGGTTTGTCTTCAAGGTCAAAACAAATTTCCAACTTCATATTGTCACATGCTTATGATGATTTTTCTGTGCTAAATTCGGTTTGAAGTCCTACTACCCTACTAGTGGAAAATGAATAAAGAACCCCAAAACAGAAACAAAAGAAGATTGTTTTTGTCAGTAGTAAGATTCACGTAATGGGTTATTTACATTTCAATTTTAAAATAAGGGATTTCTGTATTTGATTTGGTTTACATTAATGCTTGATTTAATTTTCAATGTTTTGTTCTGCAGATTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGAAGCCACAGAAAAGGTTTCTGCCCCTTCAGAAATAAACTTATTTTTATTTTTCATCATTCTAATACTGATGTCACTTTTTGAGTGCACTGATTCAACAAAAAGGTCTAGAATCATTCCATATCGTTAGTGTTAAAACATGCATGAACTTTGTGGTTGGTCGCCTTACTGAAGTTTAATGATATTAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTCAGCCATGAAATGGAGCCTTCTCTACGGAAGCTAGGATTGCCCGTTCGCTTGAACAAGGGTCAGTAAACACACACCTTTTGCCTCAAGCCCTATTTACGTTAAACAAAAATTTGGTTGTAAATCATAATTGTTGAGGGAATTGCAGGTGTGGTGGAGCTTGTATCGGACTTTACTGTATGTGAGGAGGGCAAGTCTCTTTCACCAGAGTCAGCTGGCATACTGGTTTGTATCATTTCACGACTTTCTCTTTCTTTATATATATATATATATATATATATATATATTGAATATGAATGCCTTGTAAACGAGGTTTGAAGTAGTTATTGATATTGATATCGATTTTGATATTTGTTTGGTTGCAGCGTGCCTTGGGGATAAGGATGGCAACTTTTCGCCTGAATTTGGTATGCCGGTGGAGTCCTGGTGAGTTCGAACTTTACATTGATGGACCAGATAATTCTGACATTGAAACTGCCTAGAAGAACCCCCAACACAATATTTTCCGATTAGAATTATATATATATGGGATGGATGGATGAATGAATGCATGAATGAATGACACTCTCCCCCTAGGATTAGATGCTATAATTTGAATGGGATCGGACTTCTCTCTTTTTTGTATTTTTTTTCTTCTTTCTTTTGTGTAAATTATTCAACAAATTTTGAAGGGTATGTGCCCAAATCTTGTTTTGTTGTCTCTAGTGAGGATGAACGGATGTTACTGTGACTGGTTGGTAGATTTTGATTTGTATTATTGTCAGATCGTTGGTCTTTAAATTCTTCAAATATAGTATAGTATATTATTTTATGAAATTCTGTATGTGTTATAAGCGCCAGGATCCATTAGAACTGGATCTTCCATTCTGAATTAATAATCTATCGTGTGTACCGATCTTCGTC

mRNA sequence

CTAAAACCTTCTTTACGCCCTCACCCAGCCGCATCACTCACTTTTATCGCCGCTTCCTTCTACGCCCGGTACCGAAGTTATTTGCAGCGATCAAAGATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTAATCAGGCAGGCTGTGGAAAATTACAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAACTAAAGTCGTCTAGCAGGCAAGTTGTTTCTCTTGGTCGAACTGCTTCCGATGAGATTCAACCAGGCCTATACAAGGTTTCTAAGCTTCTGCATGGCAATACTGGACTTTGTTTCACAAACTTACCGAAAGAAGAGGTTGAGAGATTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGAAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTCAGCCATGAAATGGAGCCTTCTCTACGGAAGCTAGGATTGCCCGTTCGCTTGAACAAGGGTGTGGTGGAGCTTGTATCGGACTTTACTGTATGTGAGGAGGGCAAGTCTCTTTCACCAGAGTCAGCTGGCATACTGCGTGCCTTGGGGATAAGGATGGCAACTTTTCGCCTGAATTTGGTATGCCGGTGGAGTCCTGGTGAGTTCGAACTTTACATTGATGGACCAGATAATTCTGACATTGAAACTGCCTAGAAGAACCCCCAACACAATATTTTCCGATTAGAATTATATATATATGGGATGGATGGATGAATGAATGCATGAATGAATGACACTCTCCCCCTAGGATTAGATGCTATAATTTGAATGGGATCGGACTTCTCTCTTTTTTGTATTTTTTTTCTTCTTTCTTTTGTGTAAATTATTCAACAAATTTTGAAGGGTATGTGCCCAAATCTTGTTTTGTTGTCTCTAGTGAGGATGAACGGATGTTACTGTGACTGGTTGGTAGATTTTGATTTGTATTATTGTCAGATCGTTGGTCTTTAAATTCTTCAAATATAGTATAGTATATTATTTTATGAAATTCTGTATGTGTTATAAGCGCCAGGATCCATTAGAACTGGATCTTCCATTCTGAATTAATAATCTATCGTGTGTACCGATCTTCGTC

Coding sequence (CDS)

ATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTAATCAGGCAGGCTGTGGAAAATTACAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAACTAAAGTCGTCTAGCAGGCAAGTTGTTTCTCTTGGTCGAACTGCTTCCGATGAGATTCAACCAGGCCTATACAAGGTTTCTAAGCTTCTGCATGGCAATACTGGACTTTGTTTCACAAACTTACCGAAAGAAGAGGTTGAGAGATTATTTAACGAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGAAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTCAGCCATGAAATGGAGCCTTCTCTACGGAAGCTAGGATTGCCCGTTCGCTTGAACAAGGGTGTGGTGGAGCTTGTATCGGACTTTACTGTATGTGAGGAGGGCAAGTCTCTTTCACCAGAGTCAGCTGGCATACTGCGTGCCTTGGGGATAAGGATGGCAACTTTTCGCCTGAATTTGGTATGCCGGTGGAGTCCTGGTGAGTTCGAACTTTACATTGATGGACCAGATAATTCTGACATTGAAACTGCCTAG
Homology
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BLAST of CmoCh11G012070 vs. Swiss-Prot
Match: MRT4_BOVIN (mRNA turnover protein 4 homolog OS=Bos taurus GN=MRTO4 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.4e-50
Identity = 101/208 (48.56%), Postives = 140/208 (67.31%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
           K S          +V+LGR+ SDE +  L++VSK L G  GL FTN  KEEV+  F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYT 120

Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
           + DYAR G++AT  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG 
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 202
            L+PE A +L+  G  MA F++++   W
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVSIKYMW 208

[Close]
BLAST of CmoCh11G012070 vs. Swiss-Prot
Match: MRT4_HUMAN (mRNA turnover protein 4 homolog OS=Homo sapiens GN=MRTO4 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48
Identity = 99/208 (47.60%), Postives = 137/208 (65.87%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
           K S          +V+LGR+ SDE +  L++VSK L G  GL FTN  KEEV   F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120

Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
           + DYAR G++A   V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG 
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 202
            L+PE A +L+  G  MA F++ +   W
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMW 208

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BLAST of CmoCh11G012070 vs. Swiss-Prot
Match: MRT4_MOUSE (mRNA turnover protein 4 homolog OS=Mus musculus GN=Mrto4 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-48
Identity = 100/208 (48.08%), Postives = 138/208 (66.35%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
           K S          +V+LGR+ SDE +  L++VSK L G  GL FTN  KEEV   F +Y 
Sbjct: 61  KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120

Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
           + D+AR G++AT  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG 
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180

Query: 181 SLSPESAGILRALGIRMATFRLNLVCRW 202
            L+PE A IL+  G  MA F++ +   W
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVIIKYMW 208

[Close]
BLAST of CmoCh11G012070 vs. Swiss-Prot
Match: MRT4_DICDI (Ribosome assembly factor mrt4 OS=Dictyostelium discoideum GN=mrt4 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           M KSKR+  V ++K  K   E KK +V  I+  V+ Y  IY+FT ENMRN K K +R + 
Sbjct: 1   MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60

Query: 61  KSSS-----RQVVS--LGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
            +S       +V+S  LG++  DE++P L+K+++ L G  GL FTN PK++V   F  Y 
Sbjct: 61  STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYS 120

Query: 121 DYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGK 180
           + D+ R+G  + E + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++T+CE G 
Sbjct: 121 EKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGV 180

Query: 181 SLSPESAGILRALGIRMATFRLNLVCRWSPGEFEL 209
           +++PE + +L+     ++ F+ ++   W+  EF L
Sbjct: 181 AVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTL 215

[Close]
BLAST of CmoCh11G012070 vs. Swiss-Prot
Match: MRT4_NEUCR (Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mrt4 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.1e-31
Identity = 80/233 (34.33%), Postives = 121/233 (51.93%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKR +   L++  KK RE K+ + + IR+ + NY   +VF+++NMRN   K++R++L
Sbjct: 1   MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60

Query: 61  K-------SSSRQVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYV 120
                    +     +LG T  D    GL K+SK L G+ GL FTN    E++  F    
Sbjct: 61  NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120

Query: 121 DYDYARTGSEATEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVE 180
             D+AR GS AT  + +  GPL               SH +EP LR+LG+P R+ KG V 
Sbjct: 121 QVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180

Query: 181 L------VSDFTVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFEL 209
           L        D+ +C+EG++L      +L+   I ++ FR+ L+  WS    E+
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEV 233

[Close]
BLAST of CmoCh11G012070 vs. TrEMBL
Match: A0A0A0LM77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302060 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.6e-94
Identity = 175/207 (84.54%), Postives = 189/207 (91.30%), Query Frame = 1 

Query: 26  MVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQV-----------VSLGRTA 85
           MV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRQV           +SLGR+ 
Sbjct: 1   MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRQVLLPDFSNKVMQISLGRSD 60

Query: 86  SDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGP 145
           SDEI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY DYDYARTGS A+EKVELKEGP
Sbjct: 61  SDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP 120

Query: 146 LEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFR 205
           L QFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FR
Sbjct: 121 LGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFR 180

Query: 206 LNLVCRWSPGEFELYIDGPDNSDIETA 222
           LNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 LNLVCRWSPGDFELYIDGPENSDVESA 207

[Close]
BLAST of CmoCh11G012070 vs. TrEMBL
Match: M5XU08_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010931mg PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 6.9e-91
Identity = 170/229 (74.24%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKETIVNSIRQAAEDYSSVYVFSFENMRNLKFKEFRDQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          +SLGR+ SDEI+P L+K+SK+LHGN GLCFTNLPKEEVERLF+EY
Sbjct: 61  KSTSRFFLGSNKVMQISLGRSDSDEIRPDLHKISKVLHGNAGLCFTNLPKEEVERLFSEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VC+EG
Sbjct: 121 KEYDFARTGSIATEKVELQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFLVCDEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           K LSPESA ILR LGI+MATFRL+L+ RWSPGEFELY  GPD+S +E++
Sbjct: 181 KPLSPESARILRLLGIKMATFRLHLISRWSPGEFELYGPGPDDSGVESS 229

[Close]
BLAST of CmoCh11G012070 vs. TrEMBL
Match: D7T050_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01000 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.6e-90
Identity = 171/229 (74.67%), Postives = 199/229 (86.90%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR HK+S+V+ IRQAVENY+SIYVF+ ENMRNLKFKE RE+L
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          +++GR+ +DEI+PGL KVSKLLHG+TGL FTNLPKEEV+RLFNEY
Sbjct: 61  KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS A EKVELKEGPL+QF+HEMEP LRK G+PVRLNKGVVELVSDF VCEEG
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
             LSPESA ILR LGI+MATFRL+LVCRWSP EF+LY +G D+SD+E++
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229

[Close]
BLAST of CmoCh11G012070 vs. TrEMBL
Match: A0A151T7Y5_CAJCA (mRNA turnover protein 4 isogeny OS=Cajanus cajan GN=KK1_017712 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.1e-87
Identity = 165/227 (72.69%), Postives = 193/227 (85.02%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKR+R VTLSKTKKKGR+HK+++V+ I++A E Y  +YVF+ ENMRN KFKE REQL
Sbjct: 1   MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKEAAEKYGWVYVFSFENMRNQKFKEFREQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KSSSR          V+LGR+A+DEI+PGL+KVSKLL G+ G+  TNLPKEEVERLF E+
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSAADEIRPGLHKVSKLLRGDAGMVCTNLPKEEVERLFKEF 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS ATEKV+LKEGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VCEEG
Sbjct: 121 EEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIE 220
           K LSPE+A ILR +GI+MATFRLNL+CRWSP EFELYIDGPD SD+E
Sbjct: 181 KPLSPEAARILRLMGIKMATFRLNLICRWSPDEFELYIDGPDESDVE 227

[Close]
BLAST of CmoCh11G012070 vs. TrEMBL
Match: A0A067LGD2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16917 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.0e-87
Identity = 166/229 (72.49%), Postives = 195/229 (85.15%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKR++ V+L+KTKKKGREHK+S+V+ IR+  E +NSIYVFT ENMRNLKFKE REQL
Sbjct: 1   MPKSKRNKAVSLTKTKKKGREHKESIVNSIREEAEKFNSIYVFTFENMRNLKFKEFREQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KSSSR          VSLGR+ +DEI+PG++KVSKLLHG+ GL  TNLPKEEVERLFNEY
Sbjct: 61  KSSSRFFLGSNKVMQVSLGRSIADEIRPGIHKVSKLLHGDAGLFLTNLPKEEVERLFNEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS A+EKVELKEGPL+QF+HEMEP LRK G+PVRLNKGVVELVSDF VCEEG
Sbjct: 121 EEYDFARTGSIASEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           K LSPESA ILR LGI+MATF+L+L+ RWSP +FELY +G D SD+E+A
Sbjct: 181 KHLSPESARILRLLGIKMATFKLHLIARWSPEDFELYREGVDESDVESA 229

[Close]
BLAST of CmoCh11G012070 vs. TAIR10
Match: AT1G25260.1 (AT1G25260.1 Ribosomal protein L10 family protein)

HSP 1 Score: 297.7 bits (761), Expect = 5.8e-81
Identity = 152/235 (64.68%), Postives = 186/235 (79.15%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S+YVF+ ENMRN+KFKE R+Q 
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           + + +          V+LGR+A DE++ G+YKVSKLL G+TGL  T++PKEEVE LFN Y
Sbjct: 61  RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            D D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DF VCEEG
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDG------PDNSDIETA 222
           K LSP+SA ILR L ++MATF+LNL+CRWSP +FELY +        D SD+ET+
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDLSDVETS 235

[Close]
BLAST of CmoCh11G012070 vs. NCBI nr
Match: gi|778670193|ref|XP_011649395.1| (PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 4.9e-106
Identity = 197/229 (86.03%), Postives = 212/229 (92.58%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVENYNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          +SLGR+ SDEI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY
Sbjct: 61  KSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            DYDYARTGS A+EKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 EDYDYARTGSAASEKVELKEGPLGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           KSLSPESAGILRALG+R A FRLNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 KSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPENSDVESA 229

[Close]
BLAST of CmoCh11G012070 vs. NCBI nr
Match: gi|700207020|gb|KGN62139.1| (hypothetical protein Csa_2G302060 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 9.5e-94
Identity = 175/207 (84.54%), Postives = 189/207 (91.30%), Query Frame = 1 

Query: 26  MVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQV-----------VSLGRTA 85
           MV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRQV           +SLGR+ 
Sbjct: 1   MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRQVLLPDFSNKVMQISLGRSD 60

Query: 86  SDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGP 145
           SDEI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY DYDYARTGS A+EKVELKEGP
Sbjct: 61  SDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP 120

Query: 146 LEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFR 205
           L QFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FR
Sbjct: 121 LGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFR 180

Query: 206 LNLVCRWSPGEFELYIDGPDNSDIETA 222
           LNLVCRWSPG+FELYIDGP+NSD+E+A
Sbjct: 181 LNLVCRWSPGDFELYIDGPENSDVESA 207

[Close]
BLAST of CmoCh11G012070 vs. NCBI nr
Match: gi|1009151635|ref|XP_015893654.1| (PREDICTED: mRNA turnover protein 4 homolog [Ziziphus jujuba])

HSP 1 Score: 345.1 bits (884), Expect = 8.9e-92
Identity = 171/229 (74.67%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQAVE+Y+SIYVF  ENMRNLKFKE RE++
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKEAIVNAIRQAVEDYSSIYVFKFENMRNLKFKEFREKM 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          VSLGR+A+DE++PG+YKVSKLL G+ GLCFTNL KEEVERLFNEY
Sbjct: 61  KSTSRFFLGSNKVMQVSLGRSAADEMRPGIYKVSKLLRGDAGLCFTNLAKEEVERLFNEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            DYD+ RTGS ATEKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+ VCEEG
Sbjct: 121 EDYDFGRTGSIATEKVELKEGPLDQFSHEMEPFLRKQGMPVRLNKGVVELVADYVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           K LSPE+A ILR LGI+MATFRL+L+CRWSP +FELYID P +SD+E++
Sbjct: 181 KPLSPEAARILRLLGIKMATFRLHLICRWSPSDFELYIDAPGDSDVESS 229

[Close]
BLAST of CmoCh11G012070 vs. NCBI nr
Match: gi|596214547|ref|XP_007223904.1| (hypothetical protein PRUPE_ppa010931mg [Prunus persica])

HSP 1 Score: 341.7 bits (875), Expect = 9.8e-91
Identity = 170/229 (74.24%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKETIVNSIRQAAEDYSSVYVFSFENMRNLKFKEFRDQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          +SLGR+ SDEI+P L+K+SK+LHGN GLCFTNLPKEEVERLF+EY
Sbjct: 61  KSTSRFFLGSNKVMQISLGRSDSDEIRPDLHKISKVLHGNAGLCFTNLPKEEVERLFSEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VC+EG
Sbjct: 121 KEYDFARTGSIATEKVELQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFLVCDEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           K LSPESA ILR LGI+MATFRL+L+ RWSPGEFELY  GPD+S +E++
Sbjct: 181 KPLSPESARILRLLGIKMATFRLHLISRWSPGEFELYGPGPDDSGVESS 229

[Close]
BLAST of CmoCh11G012070 vs. NCBI nr
Match: gi|645223916|ref|XP_008218859.1| (PREDICTED: mRNA turnover protein 4 homolog [Prunus mume])

HSP 1 Score: 340.9 bits (873), Expect = 1.7e-90
Identity = 170/229 (74.24%), Postives = 199/229 (86.90%), Query Frame = 1 

Query: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR HK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRVHKETIVNSIRQAAEDYSSVYVFSFENMRNLKFKEFRDQL 60

Query: 61  KSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
           KS+SR          +SLGR+ SDEI+P L+K+SK+LHGN GLCFTNLPKEEVERLFNEY
Sbjct: 61  KSTSRFFLGSNKVMQISLGRSDSDEIRPDLHKISKVLHGNAGLCFTNLPKEEVERLFNEY 120

Query: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180
            +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VC+EG
Sbjct: 121 KEYDFARTGSIATEKVELQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFLVCDEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 222
           K LSPESA ILR LGI+MATFRL+L+ RWSPGEFELY  GPD+S +E++
Sbjct: 181 KPLSPESARILRLLGIKMATFRLHLISRWSPGEFELYGPGPDDSGVESS 229

The following BLAST results are available for this feature:
BLAST of CmoCh11G012070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MRT4_BOVIN8.4e-5048.56mRNA turnover protein 4 homolog OS=Bos taurus GN=MRTO4 PE=2 SV=1[more]
MRT4_HUMAN1.6e-4847.60mRNA turnover protein 4 homolog OS=Homo sapiens GN=MRTO4 PE=1 SV=2[more]
MRT4_MOUSE2.7e-4848.08mRNA turnover protein 4 homolog OS=Mus musculus GN=Mrto4 PE=1 SV=1[more]
MRT4_DICDI2.0e-3537.67Ribosome assembly factor mrt4 OS=Dictyostelium discoideum GN=mrt4 PE=3 SV=1[more]
MRT4_NEUCR5.1e-3134.33Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-... [more]
BLAST of CmoCh11G012070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM77_CUCSA6.6e-9484.54Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302060 PE=3 SV=1[more]
M5XU08_PRUPE6.9e-9174.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010931mg PE=3 SV=1[more]
D7T050_VITVI2.6e-9074.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01000 PE=3 SV=... [more]
A0A151T7Y5_CAJCA2.1e-8772.69mRNA turnover protein 4 isogeny OS=Cajanus cajan GN=KK1_017712 PE=3 SV=1[more]
A0A067LGD2_JATCU6.0e-8772.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16917 PE=3 SV=1[more]
BLAST of CmoCh11G012070 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G25260.15.8e-8164.68 Ribosomal protein L10 family protein[more]
BLAST of CmoCh11G012070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778670193|ref|XP_011649395.1|4.9e-10686.03PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus][more]
gi|700207020|gb|KGN62139.1|9.5e-9484.54hypothetical protein Csa_2G302060 [Cucumis sativus][more]
gi|1009151635|ref|XP_015893654.1|8.9e-9274.67PREDICTED: mRNA turnover protein 4 homolog [Ziziphus jujuba][more]
gi|596214547|ref|XP_007223904.1|9.8e-9174.24hypothetical protein PRUPE_ppa010931mg [Prunus persica][more]
gi|645223916|ref|XP_008218859.1|1.7e-9074.24PREDICTED: mRNA turnover protein 4 homolog [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
biological_process GO:0008150 biological_process
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G012070.1CmoCh11G012070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 19..112
score: 3.9
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 21..208
score: 1.3
NoneNo IPR availablePANTHERPTHR21141:SF37MRNA TURNOVER PROTEIN 4 HOMOLOGcoord: 21..208
score: 1.3
NoneNo IPR availableunknownSSF160369Ribosomal protein L10-likecoord: 20..134
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G012070CmaCh11G011640Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G012070Cp4.1LG04g00300Cucurbita pepo (Zucchini)cmocpeB127
CmoCh11G012070Carg26981Silver-seed gourdcarcmoB1113
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None