CmoCh11G011330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G011330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Specific tissue protein 1, putative
Location	Cmo_Chr11 : 6394781 .. 6395941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAAGAGCTGAAAAGATATGAAGATGAGTCCAATCACTCTCATTTTGCTTCTTTTGGTATGAAATTCCTTTTTTTTTTTTTTTTTTTGCAACGTTTTTTAACTTATAATTTGTTCGTATGTTTATGAGAAATTCCTTATTATAATTTATTAAAGGGTATTGTTCTCTTTTTTTGGTTCTTTCTTATTATGGTAATTGTTTAGCTAGTTGATAACATACAATCAAGGCATGAACCGGGAGAACATTGGAGTAATGTGATTGAAGATGAGGCATTACCAGAAGCAACTAAAGTGAAAGAAGATAGCATTGAAGATAAACCGCTCCTAAATGAAAAACTTTTTGTCAAGGATATAGAACCGAGGCCAAGTGTTTCATTTTATCTGAACGATGCTGAAAAGAAATCATTTTCTAAAGACATTGAGCCACGACCAGGTGCAACGTTTTACCCGAATGAGAATGTCAAAGTCATACTTTTTGATAAAGATATTGAGCCACGACCTGGTTTAACGTTTTATCCAAATGAGCATGTCAAAACTATACTTTTTGACGAAGATATTCAACCACGACCAAGTGTATCGTTCTACCCAAATGATGGAAAAGCCAAGCTTTTTGTTAAAGATATTGAACCACGACTAAGTGTATCGTTCTACTCCGATAATGAGAAAGCTAAGCTTTTCGCTAAAGATATTGAACCACGACCAAACGTCTCGTCTTACCCAAGTGAGAACAAGGATGAACTTTATACCAACGACATAAAGCCACAACCAAGTACTACAGTTTATCCTCACAATCTCAACTCAAAAGCTTCTTCTGCTGATTGTCACCACGATGACGATGACATACAGATCACACGAGCCTAGTGTTATGTCAATAACGACCGTGGGTGTGGAAAGATTATGATACAAGAAAACAATGGAGCCTTTAAGAAACCTTAAGCTATGATCCAACTACTTGTGGTTTGTAATTTACGTTTGTGATGAACGTGGTGTGATTTGTAAAATAAATAAATAACTTATGTTTAAGAATGATCTATTTCGATTTAAGATATTGTAAGACTGAGGGTAAAATTACTCAGTAACCAACCTACCTATAATCTCTCGTCAAACCTTCTTCTATTAAGTGTTTTCTAAGGCTACGTGTTCTATCAGCGTTCGAGAG

mRNA sequence

AAAGGAAAGAGCTGAAAAGATATGAAGATGAGTCCAATCACTCTCATTTTGCTTCTTTTGCTAGTTGATAACATACAATCAAGGCATGAACCGGGAGAACATTGGAGTAATGTGATTGAAGATGAGGCATTACCAGAAGCAACTAAAGTGAAAGAAGATAGCATTGAAGATAAACCGCTCCTAAATGAAAAACTTTTTGTCAAGGATATAGAACCGAGGCCAAGTGTTTCATTTTATCTGAACGATGCTGAAAAGAAATCATTTTCTAAAGACATTGAGCCACGACCAGGTGCAACGTTTTACCCGAATGAGAATGTCAAAGTCATACTTTTTGATAAAGATATTGAGCCACGACCTGGTTTAACGTTTTATCCAAATGAGCATGTCAAAACTATACTTTTTGACGAAGATATTCAACCACGACCAAGTGTATCGTTCTACCCAAATGATGGAAAAGCCAAGCTTTTTGTTAAAGATATTGAACCACGACTAAGTGTATCGTTCTACTCCGATAATGAGAAAGCTAAGCTTTTCGCTAAAGATATTGAACCACGACCAAACGTCTCGTCTTACCCAAGTGAGAACAAGGATGAACTTTATACCAACGACATAAAGCCACAACCAAGTACTACAGTTTATCCTCACAATCTCAACTCAAAAGCTTCTTCTGCTGATTGTCACCACGATGACGATGACATACAGATCACACGAGCCTAGTGTTATGTCAATAACGACCGTGGGTGTGGAAAGATTATGATACAAGAAAACAATGGAGCCTTTAAGAAACCTTAAGCTATGATCCAACTACTTGTGGTTTGTAATTTACGTTTGTGATGAACGTGGTGTGATTTGTAAAATAAATAAATAACTTATGTTTAAGAATGATCTATTTCGATTTAAGATATTGTAAGACTGAGGGTAAAATTACTCAGTAACCAACCTACCTATAATCTCTCGTCAAACCTTCTTCTATTAAGTGTTTTCTAAGGCTACGTGTTCTATCAGCGTTCGAGAG

Coding sequence (CDS)

ATGAAGATGAGTCCAATCACTCTCATTTTGCTTCTTTTGCTAGTTGATAACATACAATCAAGGCATGAACCGGGAGAACATTGGAGTAATGTGATTGAAGATGAGGCATTACCAGAAGCAACTAAAGTGAAAGAAGATAGCATTGAAGATAAACCGCTCCTAAATGAAAAACTTTTTGTCAAGGATATAGAACCGAGGCCAAGTGTTTCATTTTATCTGAACGATGCTGAAAAGAAATCATTTTCTAAAGACATTGAGCCACGACCAGGTGCAACGTTTTACCCGAATGAGAATGTCAAAGTCATACTTTTTGATAAAGATATTGAGCCACGACCTGGTTTAACGTTTTATCCAAATGAGCATGTCAAAACTATACTTTTTGACGAAGATATTCAACCACGACCAAGTGTATCGTTCTACCCAAATGATGGAAAAGCCAAGCTTTTTGTTAAAGATATTGAACCACGACTAAGTGTATCGTTCTACTCCGATAATGAGAAAGCTAAGCTTTTCGCTAAAGATATTGAACCACGACCAAACGTCTCGTCTTACCCAAGTGAGAACAAGGATGAACTTTATACCAACGACATAAAGCCACAACCAAGTACTACAGTTTATCCTCACAATCTCAACTCAAAAGCTTCTTCTGCTGATTGTCACCACGATGACGATGACATACAGATCACACGAGCCTAG

Homology

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BLAST of CmoCh11G011330 vs. Swiss-Prot
Match: OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 54/193 (27.98%), Postives = 86/193 (44.56%), Query Frame = 1


Query: 9   ILLLLLVDNIQSRHEPGEHWSNVIEDEALPE-------ATKVKEDSIEDKPLLNEKLFVK 68
           + LLL+V N++SR + GE+W  V++D+ +PE       A+ +K      K  +     + 
Sbjct: 12  LFLLLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLDASNIKNSKTHAKENMGA---IG 71

Query: 69  DIEPRPSVSFY----LNDAEKKSFSKDIEPRPGATFY------PNENVKVILFDKDIEPR 128
           + EPRP  S Y    ++  E      + EPRP A+ Y       NEN        + EPR
Sbjct: 72  EFEPRPYASAYGDNEIHAKENMGAIGEFEPRPNASAYGDNEIHANENKGA---SGEFEPR 131

Query: 129 PGLTFYPNEHVKTILFDEDIQPRPSVSFYPNDGKAKLFVKDIEPRLSVSFYSDNEKAKLF 185
           P ++ Y +  +                 + N+ K    + + E R + S Y DNE    F
Sbjct: 132 PNISAYGDNEI-----------------HANENKGA--IGEFETRPNASAYGDNEIGAEF 179

[Close]

BLAST of CmoCh11G011330 vs. Swiss-Prot
Match: OSP4_PEA (Organ-specific protein P4 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-07
Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 1


Query: 9   ILLLLLVDNIQSRHEPGEHWSNVIEDEALPE-------ATKVKEDSIEDKPLLNEKLFVK 68
           + L L+V N++SR + GE+W  V++D+ +PE       A+ +K      K     K  + 
Sbjct: 13  LFLFLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLDASNIKNSKTHAK---ENKGAIG 72

Query: 69  DIEPRPSVSFY----LNDAEKKSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTFY 118
           + EP P+ S Y    ++  E K    + E RP  + Y +  +    F  D EPRP +T Y
Sbjct: 73  EFEPCPNASAYGDNEIHANENKGAIGEFETRPNGSAYGDNEIGA-EFTDDFEPRPSMTKY 128

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BLAST of CmoCh11G011330 vs. TrEMBL
Match: A0A0A0K958_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-62
Identity = 126/216 (58.33%), Postives = 160/216 (74.07%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITL LLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIKPTFGITLFLLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  DI+PRPS++FY ND  K K F KDIEPRP  TFYPN++ K  LF KDIEPRP LTF
Sbjct: 61  TFFNDIKPRPSITFYPNDGSKDKFFIKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS++FYPND  K KLF KDIEPR S++FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPS-ENKDELYTNDIKPQPSTTVYPHN 210
           IEPRP+++ YP+ E+KD+ +  DI+P+PSTT YP++
Sbjct: 181 IEPRPSLTFYPNDESKDKFFIKDIEPRPSTTFYPND 216

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BLAST of CmoCh11G011330 vs. TrEMBL
Match: A0A0A0K3R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.7e-61
Identity = 123/216 (56.94%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITLILLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  D +PRPS++FY ND  K + F+KDIEPRP ATFYPN+  K   F KDIEPRP  TF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS +FYPND  K KLF KDIEPR S +FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPHN 210
           IEPRP+ + YP+++ K++L+T DI+P+PS T YP++
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPND 216

[Close]

BLAST of CmoCh11G011330 vs. TrEMBL
Match: A0A0A0K5Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 97/204 (47.55%), Postives = 135/204 (66.18%), Query Frame = 1


Query: 55  NEKLFVKDIEPRPSVSFYLNDAEKKSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGL 114
           N++   KDIEPRP+VSFY +D + K F++D+EPRP  +FYP++  K  LF +D+EPRP +
Sbjct: 153 NKRKLAKDIEPRPNVSFYPDDTKTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNV 212

Query: 115 TFYPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFYSDNE-KAKLFA 174
           +FYP++  KT LF ED++PRP+VSFYP+D  K KLFV+D+EPR +VSFY D+E K KLFA
Sbjct: 213 SFYPDDETKTKLFAEDVEPRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFA 272

Query: 175 KD-----------------------IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPH 232
           +D                       IEPRPNVS YP ++ K +L   DI+P+P+ + YP 
Sbjct: 273 EDVEPRPNSFFYPDDDIKTKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYPD 332

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BLAST of CmoCh11G011330 vs. TrEMBL
Match: A0A164VLH6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022110 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.4e-31
Identity = 94/215 (43.72%), Postives = 128/215 (59.53%), Query Frame = 1


Query: 23  EPGEHWSNVIEDEALPEATKVKEDSIEDKPLLN-----EKL-----FVKDIEPRPSVSFY 82
           EP  + S+  +DE L E+    +D IE +P ++     EKL     F KDIEPRP+VS Y
Sbjct: 206 EPRPNVSSYHDDEKLKESDSFSKD-IEPRPNVSSYHDGEKLRDNESFDKDIEPRPNVSSY 265

Query: 83  LNDAEKK---SFSKDIEPRPGATFY-------PNENVKVILFDKDIEPRPGLTFYPNEH- 142
            +DA  K   SFSKDIEPRP  + Y        NE+     FDKDIEPRP ++ Y ++  
Sbjct: 266 HDDANLKKSDSFSKDIEPRPNVSSYHDGEKLRDNES-----FDKDIEPRPNVSSYHDDAN 325

Query: 143 -VKTILFDEDIQPRPSVSFYPNDGKA---KLFVKDIEPRLSVSFYSDNEK---AKLFAKD 202
             K+  F +DI+PRP++S Y  D K    + F+KDIEPR +VS Y D++K      F KD
Sbjct: 326 LKKSDSFSKDIEPRPNISAYQGDKKLTENESFIKDIEPRPNVSSYHDDDKLTKTDAFTKD 385

Query: 203 IEPRPNVSSYPSE---NKDELYTNDIKPQPSTTVY 207
           IEPRPNVSSY       +D+ Y +D+KP+P+ ++Y
Sbjct: 386 IEPRPNVSSYDDNEALKEDKSYADDLKPRPNISIY 414

[Close]

BLAST of CmoCh11G011330 vs. TrEMBL
Match: A0A164VLK0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022107 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 85/217 (39.17%), Postives = 130/217 (59.91%), Query Frame = 1


Query: 16  DNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLN-----EKL-----FVKDIEP 75
           D+     EP  + S+  ++E L       + +IE +P ++     EKL     F KDIEP
Sbjct: 258 DSFSKDIEPRPNISSYHDEEKLRNDESF-DKNIEPRPNISAYHDGEKLTENESFDKDIEP 317

Query: 76  RPSVSFYLNDAEKK---SFSKDIEPRPG-ATFYPNENVK-VILFDKDIEPRPGLTFYPNE 135
           RP++S Y +D + K   SFSKDIEPRP  ++++ +E ++    FDKDIE RP ++ Y ++
Sbjct: 318 RPNISSYHDDEKLKKSDSFSKDIEPRPNISSYHDDEKLRDTESFDKDIEARPNISSYHDD 377

Query: 136 HV--KTILFDEDIQPRPSVSFYPNDGKA---KLFVKDIEPRLSVSFYSDNEKAK---LFA 195
               K   F +DI+PRP++S Y  D K    + F++DIEPR ++S Y D+EK K    F 
Sbjct: 378 EKLKKNDSFSKDIEPRPNISAYQGDKKLTENESFIRDIEPRPNISSYHDDEKLKKTDAFT 437

Query: 196 KDIEPRPNVSSYPSE---NKDELYTNDIKPQPSTTVY 207
           KDIEPRPN+S+Y       +D+ Y +D+KP+P+ ++Y
Sbjct: 438 KDIEPRPNISAYNDNEALKEDKSYDDDLKPRPNISIY 473

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BLAST of CmoCh11G011330 vs. NCBI nr
Match: gi|700189108|gb|KGN44341.1| (hypothetical protein Csa_7G262900 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-62
Identity = 126/216 (58.33%), Postives = 160/216 (74.07%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITL LLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIKPTFGITLFLLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  DI+PRPS++FY ND  K K F KDIEPRP  TFYPN++ K  LF KDIEPRP LTF
Sbjct: 61  TFFNDIKPRPSITFYPNDGSKDKFFIKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS++FYPND  K KLF KDIEPR S++FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPS-ENKDELYTNDIKPQPSTTVYPHN 210
           IEPRP+++ YP+ E+KD+ +  DI+P+PSTT YP++
Sbjct: 181 IEPRPSLTFYPNDESKDKFFIKDIEPRPSTTFYPND 216

[Close]

BLAST of CmoCh11G011330 vs. NCBI nr
Match: gi|778726206|ref|XP_011659073.1| (PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 123/216 (56.94%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITLILLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  D +PRPS++FY ND  K + F+KDIEPRP ATFYPN+  K   F KDIEPRP  TF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS +FYPND  K KLF KDIEPR S +FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPHN 210
           IEPRP+ + YP+++ K++L+T DI+P+PS T YP++
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPND 216

[Close]

BLAST of CmoCh11G011330 vs. NCBI nr
Match: gi|700189107|gb|KGN44340.1| (hypothetical protein Csa_7G262890 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 123/216 (56.94%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITLILLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  D +PRPS++FY ND  K + F+KDIEPRP ATFYPN+  K   F KDIEPRP  TF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS +FYPND  K KLF KDIEPR S +FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPHN 210
           IEPRP+ + YP+++ K++L+T DI+P+PS T YP++
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPND 216

[Close]

BLAST of CmoCh11G011330 vs. NCBI nr
Match: gi|778726210|ref|XP_011659075.1| (PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 123/216 (56.94%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MKMSP---ITLILLLLLVDNIQSRHEPGEHWSNVIEDEALPEATKVKEDSIEDKPLLNEK 60
           MK+ P   ITLILLLL  + I+SR+EPG  W NVIED++LP  ++ KED  + K L NE 
Sbjct: 1   MKIQPTFGITLILLLLFFNGIESRYEPGGQWKNVIEDDSLPVVSQEKEDCFKYKSLKNEN 60

Query: 61  LFVKDIEPRPSVSFYLNDAEK-KSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGLTF 120
            F  D +PRPS++FY ND  K + F+KDIEPRP ATFYPN+  K   F KDIEPRP  TF
Sbjct: 61  TFFNDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATF 120

Query: 121 YPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFY-SDNEKAKLFAKD 180
           YPN+  K  LF +DI+PRPS +FYPND  K KLF KDIEPR S +FY +D+ K KLF KD
Sbjct: 121 YPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKD 180

Query: 181 IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPHN 210
           IEPRP+ + YP+++ K++L+T DI+P+PS T YP++
Sbjct: 181 IEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPND 216

[Close]

BLAST of CmoCh11G011330 vs. NCBI nr
Match: gi|778726203|ref|XP_004151481.2| (PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 97/204 (47.55%), Postives = 135/204 (66.18%), Query Frame = 1


Query: 55  NEKLFVKDIEPRPSVSFYLNDAEKKSFSKDIEPRPGATFYPNENVKVILFDKDIEPRPGL 114
           N++   KDIEPRP+VSFY +D + K F++D+EPRP  +FYP++  K  LF +D+EPRP +
Sbjct: 153 NKRKLAKDIEPRPNVSFYPDDTKTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNV 212

Query: 115 TFYPNEHVKTILFDEDIQPRPSVSFYPNDG-KAKLFVKDIEPRLSVSFYSDNE-KAKLFA 174
           +FYP++  KT LF ED++PRP+VSFYP+D  K KLFV+D+EPR +VSFY D+E K KLFA
Sbjct: 213 SFYPDDETKTKLFAEDVEPRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFA 272

Query: 175 KD-----------------------IEPRPNVSSYPSEN-KDELYTNDIKPQPSTTVYPH 232
           +D                       IEPRPNVS YP ++ K +L   DI+P+P+ + YP 
Sbjct: 273 EDVEPRPNSFFYPDDDIKTKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYPD 332

The following BLAST results are available for this feature:

BLAST of CmoCh11G011330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OSS2_PEA	1.5e-12	27.98	Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1	[more]
OSP4_PEA	5.4e-07	30.00	Organ-specific protein P4 OS=Pisum sativum PE=2 SV=1	[more]

BLAST of CmoCh11G011330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K958_CUCSA	1.4e-62	58.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1	[more]
A0A0A0K3R4_CUCSA	7.7e-61	56.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1	[more]
A0A0A0K5Y0_CUCSA	1.2e-45	47.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1	[more]
A0A164VLH6_DAUCA	6.4e-31	43.72	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022110 PE=4 SV=1	[more]
A0A164VLK0_DAUCA	1.7e-28	39.17	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_022107 PE=4 SV=1	[more]

BLAST of CmoCh11G011330 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh11G011330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189108\|gb\|KGN44341.1\|	2.0e-62	58.33	hypothetical protein Csa_7G262900 [Cucumis sativus]	[more]
gi\|778726206\|ref\|XP_011659073.1\|	1.1e-60	56.94	PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus]	[more]
gi\|700189107\|gb\|KGN44340.1\|	1.1e-60	56.94	hypothetical protein Csa_7G262890 [Cucumis sativus]	[more]
gi\|778726210\|ref\|XP_011659075.1\|	1.1e-60	56.94	PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus]	[more]
gi\|778726203\|ref\|XP_004151481.2\|	1.7e-45	47.55	PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024489	Organ_specific_prot

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G011330.1	CmoCh11G011330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PRODOM	PD010796		coord: 15..117 score: 2.
IPR024489	Organ specific protein	PFAM	PF10950	DUF2775	coord: 23..117 score: 1.1E-10coord: 126..184 score: 7.1
None	No IPR available	PANTHER	PTHR33731	FAMILY NOT NAMED	coord: 35..209 score: 2.4
None	No IPR available	PANTHER	PTHR33731:SF1	SUBFAMILY NOT NAMED	coord: 35..209 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G011330	Cucsa.240450	Cucumber (Gy14) v1	cgycmoB0673
CmoCh11G011330	CmaCh11G011050	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G011330	CmaCh19G006570	Cucurbita maxima (Rimu)	cmacmoB495
CmoCh11G011330	Cla015936	Watermelon (97103) v1	cmowmB111
CmoCh11G011330	Csa7G259390	Cucumber (Chinese Long) v2	cmocuB141
CmoCh11G011330	MELO3C012540	Melon (DHL92) v3.5.1	cmomeB086
CmoCh11G011330	ClCG02G005110	Watermelon (Charleston Gray)	cmowcgB089
CmoCh11G011330	CSPI07G11510	Wild cucumber (PI 183967)	cmocpiB140
CmoCh11G011330	Lsi11G010890	Bottle gourd (USVL1VR-Ls)	cmolsiB090
CmoCh11G011330	Cp4.1LG15g05280	Cucurbita pepo (Zucchini)	cmocpeB096
CmoCh11G011330	Cp4.1LG04g00830	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G011330	MELO3C012540.2	Melon (DHL92) v3.6.1	cmomedB092
CmoCh11G011330	CsaV3_7G023460	Cucumber (Chinese Long) v3	cmocucB0163
CmoCh11G011330	Cla97C02G032060	Watermelon (97103) v2	cmowmbB089
CmoCh11G011330	Bhi05G001081	Wax gourd	cmowgoB0121
CmoCh11G011330	CsGy7G010770	Cucumber (Gy14) v2	cgybcmoB884

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G011330	CmoCh19G006680	Cucurbita moschata (Rifu)	cmocmoB111

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G011330	Cucurbita moschata (Rifu)	cmocmoB120