CmoCh11G009070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G009070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	E3 ubiquitin-protein ligase RHF2A
Location	Cmo_Chr11 : 4669507 .. 4676590 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGTAGTAAAACGCTTGCCACGAGTTAAATCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGCAGCAGCCTTTTATCAAGTCAAGGACGGAGCCAATCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAGTCCAATCTTATTTACCTGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGGTAACTTTCTTCCCCTAAATCTCTTCTCTCTTCCTTCTTTTTGCGTTTCATGTCCCTATCTTTAATTCTCTCTTTGATGAATATTATTGTGCCTACTTTTCTTCCTTTTTTCCGGATTCCGTTTTTCTTGGCTGTTGTTCACCGGATGGATTTATTCTGTTACTGGATTCTTTTACTTTTTTTAATCTTGTTTTCATTGAGTATCGGAACTGGAGAGGAATGGCTTTGTTATCCTTTTCAAATGTATTTTCCTCTTGAATTTTCATTCTGGCTATCTCTATTTGTAGTTTTTGCGATCTTTTATTACTGTTCTCTTCGGGCTAGCTGCTTGTTGCTTTTCGCTCTGGAAATTGTGGTTTTGAATTCTTTGATTCTTTATGGATGTTAGGGTAGGCTGTTTGTGCGTGGTTTAATTCACTGAAAATTTGTGTCGTGTCGCTAATTTATAATTGTTAGCACTTGTTTATCATTTCCTTGTTTAGTTGCTGCTTATATATCACGCAATAGATCATGTGTTTCTTGTATATTTTTAAGTTTTTCTTGGTGATGATGATTTTTTTTTTTTTTTAAAATTCGTGTAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCAAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAGTGATCCTTCAACGGTAGTACTTATAGTGTGATTTGATTTTTAATCGGAAGTCAGATGGTTTCTGTTCTACTTAGTCAGTTGCTATATTTTGTTCAGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCAATATCTGTTTGAGATATCAGATCTGCTTGTGATCATCTTGTCTTACTATTGATTTGATTACGACGACAGTGGATGTTTGGCAGACTACCATATACCTGCCTCTAACTGTGGCTTCTTTTTATATTTATACAGTTTCGTCAATTAAGTTCATTTGATGCACCAATTTGTAACCACCGGGGGTTCTTGGGCATTTCCCTTCTTTTATAATTTTCACCAGCCAATGAAAAGTATCTTATTTCCTTCTTCCTCCAAAAAGAAAAATAAAATTATAGGGAAGTTCTAATACTTCGAAAGGGTTAGTAGATCATCATATAAGTAGAATCTTACGTATTTGAATTGTGAGACGGTTGATTTCTCAGTGCTAGAAATGAATCCAAATTTGAAAGACCATGCTAGGTACTTCGGGGGTGTAAGACTTGATTAAGTATCTGGGTCTGTTGCTATGACAAGTCTTCTATTGACTAGTGTCCAGACTACCAATCTATGATGTACTGGTGGGGGTGGAAGCTGGCAAGCAATATGACTTACTACCCTCATTATTAGTATCACATGTATTTAACATCTAGGTGATAGCTTATAGTGGTAAAGGTGGTGGGAATTTGGATGCTCTTTTTATTTCGTGGTATGATGTGCTGAGTTTCTAATATCATCTTCAGAATGTTGAGACAAGAGAGAAAAAGGTCAGCAGACCTCTTGCCATGTGGGCATTTTCCTTTGATGGTTGAAGAAAATGGTGAGGATGAAATCTAACTTCAAGAGTTGGATTTTGTTTAAAGATTCTTGGATTTAACCTAGTGATCGTGGTTTTAACCCATGCCCAGCATTGCCTGCTTGGAATATTAAAAATTTGACACGGCAAACATTGGGTGGCTTGAAGATTTTGGGTAGAAAATTGATGTAATTCATGTGAGGATTAAACCATACATGAATACTTATTTTTATTGCTTTTTCATTCTCTTACTCAGTTGAAAAAAGTTGAACTTTATAAAATATAATTCCAAATTGCAAAAAATATAATTCTCAAAACCAGCTAACGGATATGGACTTCAAGGCAAGACAGTCTTCCTGATGATCGTTCCTGTAAAATACCAACCTCTTATGCATTAAAGCTTAACTTGACATTCCATCTTATCTTCTGAAACCAACACTGCTTTTGATGTGATCATACTTGGAAATTAAGTGCACAATATCTTTGCAGACCCGTTTAGCAAATATTTATCTCCCTTTCAATGTTAAGTTGTGAGTTTTTCAAATATTTTTGCAGATGCCTAATTTTTTTTGAATGTTCATCTATTTCATTGATGTGCGTTTGCATCTTTTCTGCATAATAGTTTGCTGCGGATCACTTTTTACAAGTTTGGATTGCAATTGATCTCTAATATATGTGATTTCAACATATTGAATCCCGACGAAGAAAAGAAAGAGAGTTTTTGTGGATAGTATCCATTGCAAGATCGTTTCCTAGACTTGAATATGAGCCATAGTTGTTTGCTACCCTATTCTGTAAGCTCTATCATTGGAAAAAGCTAAGGATCACTGGATTCTCATAACCATTTTTTTGACGTTTCTTTTTGGAAAAAAATTCTCTGATTTTAACCATGGGTCAATGACTCAATCTTATGGAACTGTGACAAGGAAGACCTACTTTGGTGTCCTTGGCCTAAAATAGAGAAGACCTACTTTGGAAGTGTGATAATCTGGGTCTTTTATAACCAAATATCTATTAACTGATTTACGGGAGCCTTCTGTTTTGGATGGTACTTTATGCTTCTTCCTCTAACGCTTTTTTCTTAAAAAAAGGTTGGTGCTTTCTTTGGCAGTTTTCTCATGAAGGAATTATTACTTAGTACAAGATCCAGAAGAGGCACCCCTGTATTGTTCTTTTTTTAAAATCTGGTCTTGGTCATATATTGAAGTGAAACAAAATAGATTGGTTTGGGCTTGATTGAGTGAACAAGAACTCAGAACACCCAAGGACTTTCACCACACTTTTTCTTTTTTTCTTTTTTAATTTTTACAAGAACTACTGATTGTTCATATCATTTTGAATTGTTCATTCACTTTCTCCTGTGTGTCCCAACTTTCTGACAGTCAACATGGAATCTAACCTTCATCTTTTCAGTGAGCTTTGTCTTGCTTCTATTTACATAAAAGTACTATAAACCAATCATCATTAAACAAAAAATCATTTAAACATATTTCCATTCAGAATACCGAGCTGTCTAATTACTTAGATTATTAACTAACAATAAGTTGGCTTGGATAGTCCATGATCTGCTTCGTAGGCTGCTTTTGTTGTGATTCTGATCCTATGAATCATATATTTTGTTATTGCTAGATTGAGGGGTTTGTGTTGTTTATATATTTCTTTCATTTTTTGCCATGATGCTTTATGGTGGTAGGGCTCAGTTGGGAGTGGTTTTCTTTCAGTTCTATTGTATGATAGTTTTTTTAGGGAAGGTTCAAATTTCAACTTTCTTAGACTAGAATTCAGGCGGTTATTGTTTTAAGTAGAAATGTAAAACATATTATTATTTTTTTTAAGAAGGTTGGAAATTATATAAAGCTTCACAGTGAATAAAAAATGGGAAGAACATTTTTTGAATTGAAAAGCCAGACCAGAAACGTGACATTAATCTGGAAAGAAATTGGAATCCCGTCTTCATCAAGCAAATTATTCTGAAATTTCTCAAGTACCTCTCTTTAGCCAGATACTCCACAACATGATCAATACTCCCAGCTCTGCCGAAGTTGTGCATTATTTTCTGCATTAATATGAAGTTTGAGGTTATGACTGGAATTTAAATTTGATTGGTTCAAGCATTTTTATTTTGTCCCATCTTTTAATAGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGGTTTATACTGATTCCATTTTTGTATCATCACTTTTTCATTTAAATTTGAAAGCAGATGAAGGTTGTTTATGTGAGGTTGTTCTGCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGCCATCCCACTTTTGGTGACTTTGAGTTACAGCATGTATGTATCCAATATGATATTTACCCTAAAGTCACTAAATCATGGACACCAAAATCTAAGTTGGGGAACGTTTTTTCTCAATGCAGCTGCCAGCTGGTGCTGATGATGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCTAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCCACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTTCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTTCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGTATTCATTATTCATTGGATTTAATTGAAATGTGTCCATCGCATGTAGCTACATGGAATTTATCGGTCATGTATTAATATTATTGTCCCACACCGTTCTTAGGAGATCCACCAGTCAACCAGTGCCAAGTAGTCAAGATAGAGCCGGGCCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGGTTTGTAATATGTCTTAATGGCTTTTATTGTTTTTAGTGTAATTTTTGATTACTTTGTTCTTTCATGACCTGAGCACCTCCATTATCCTTTTCTTTTCAGATACAAAGATTCAATCGCAAAGAGCACACGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGAATAGCAACGGTATCACGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCAGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAGAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGGTGAATACTGCAATTGATTGTTTCCTTCTTCCATACTACAAGAAATAGCCTGTAGTAGACTGAAGTTTTAAAAAAAATGGAAAAAAAAAAAGAAAAAAGAAAGGGGAACTTCGAAATATTCACAAAAATGACTGGGCTTTAGTTTATTTTATAATTTGTTAAGAGTCAATTTAAATATTAGTCCATGTAGTAAATAGCTTATTTACTCGTAAATTGACAGTCATAGTTGGAAGAATCGCCCTGTCTAAGTCCATATTGTCCTCTTTGTGCTTCTTCTCAAGGTTTTGAAACGTGTCTACTAAGGAGAAGTTTCCATATCTTTATAAAGAACGCTTTATTCTATTCTTCCATAGATGTCATCAGGTTTAATATATAGGGGTCTCACGCTATTTGTAGAATTTATAATGTGCGCTCTTTGCTTGTGGAATAGATGACTGAACAGACGGTGGAATACAGAAAGGTAAATAGAAAGAAACTTTTGTAGACGTGTTTCTGAGTATTTCTCGTATATTTCCTTCTAGAAGGAAGAAAGTGTTCCTCTAGTTTGTAACTTTTTTTTTTTGATAATGCTCTTTTCTCCCATATCATTAAAGAGAAGATTCTTCTGAAGTGCCTAATTATCCACTAATTTGTTAGTGGGACTTTTACCAGATTTGAATCATTCATCAGGGGTTGATTGATGGCATGCTATTTTGTCTCTCTTCATGCAAGTAATTTTGATTACCTTGGTTGACTGAGCTATATCTATGGCTATGTTCGAGTTGATATCCTTTGTTCTTCTTGATGTTATCATGATAACGTCGACAGGACATTCGACTATTTAATGTCGTGTTTTATTTTAGGCTATAGAGACAATAAGCATGGGTTTGAAGAGCATCAATATTGTTATGAACTTGTATCTTTGTTTTTTGTGGATATTTTTTTCTTTCCATTTATTCCCTTTACGCTTTAACCACTCAATTAAATAAATACTGTTGTGGGGGAGAATTGGTTGACATATTCAAGTCAACTAGTGGTGTGTTAGTTAATGTAACTATTAACGACCCGTTAGGTTTAATATATATGT

mRNA sequence

CGAGTAGTAAAACGCTTGCCACGAGTTAAATCCCATCATAGCTCATACGCACTGACCCGACGACCGACCCAAGCGCAGCACTCAGCAGCAGCCTTTTATCAAGTCAAGGACGGAGCCAATCCTCCTCCTCCTCCTCCGCCTGCTCCTCCTCCTAGGGTTCCACTGGTTCCAGTCCAATCTTATTTACCTGTTCTCTCACAAGCTTCTCCTGCTGATCGTCGTTTCTCATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCAAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAGTGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGCCATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGATGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCTAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCCACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTTCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTTCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCCAAGTAGTCAAGATAGAGCCGGGCCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACACGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGAATAGCAACGGTATCACGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCAGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAGAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGAACATTCTCAGAATTGGCTTCACTCAAAGGCCATCTTATAAGAGGTGAATACTGCAATTGATTGTTTCCTTCTTCCATACTACAAGAAATAGCCTGTAGTAGACTGAAGTTTTAAAAAAAATGGAAAAAAAAAAAGAAAAAAGAAAGGGGAACTTCGAAATATTCACAAAAATGACTGGGCTTTAGTTTATTTTATAATTTGTTAAGAGTCAATTTAAATATTAGTCCATGTAGTAAATAGCTTATTTACTCGTAAATTGACAGTCATAGTTGGAAGAATCGCCCTGTCTAAGTCCATATTGTCCTCTTTGTGCTTCTTCTCAAGGTTTTGAAACGTGTCTACTAAGGAGAAGTTTCCATATCTTTATAAAGAACGCTTTATTCTATTCTTCCATAGATGTCATCAGGTTTAATATATAGGGGTCTCACGCTATTTGTAGAATTTATAATGTGCGCTCTTTGCTTGTGGAATAGATGACTGAACAGACGGTGGAATACAGAAAGGTAAATAGAAAGAAACTTTTGTAGACGTGTTTCTGAGTATTTCTCGTATATTTCCTTCTAGAAGGAAGAAAGTGTTCCTCTAGTTTGTAACTTTTTTTTTTTGATAATGCTCTTTTCTCCCATATCATTAAAGAGAAGATTCTTCTGAAGTGCCTAATTATCCACTAATTTGTTAGTGGGACTTTTACCAGATTTGAATCATTCATCAGGGGTTGATTGATGGCATGCTATTTTGTCTCTCTTCATGCAAGTAATTTTGATTACCTTGGTTGACTGAGCTATATCTATGGCTATGTTCGAGTTGATATCCTTTGTTCTTCTTGATGTTATCATGATAACGTCGACAGGACATTCGACTATTTAATGTCGTGTTTTATTTTAGGCTATAGAGACAATAAGCATGGGTTTGAAGAGCATCAATATTGTTATGAACTTGTATCTTTGTTTTTTGTGGATATTTTTTTCTTTCCATTTATTCCCTTTACGCTTTAACCACTCAATTAAATAAATACTGTTGTGGGGGAGAATTGGTTGACATATTCAAGTCAACTAGTGGTGTGTTAGTTAATGTAACTATTAACGACCCGTTAGGTTTAATATATATGT

Coding sequence (CDS)

ATGGAGTCTCCAACGATGGACGAAACTAAGAATTCTGAAGCGCATTTGACATCAGCTGCAGCTTTTGTCAAAGGTGGAATCCAGGATGCTTGTGATGACGCTTGCAGTATATGTCTTGAAAACTTCTGTGACAGTGATCCTTCAACGATGACCAGTTGCAAACATGAGTTTCATCTGCAGTGCGTTCTTGAATGGTGTCAGAGAAGCTCCCAATGCCCCATGTGTTGGCAACCTGTTAGTCTGAAGGATCCAACCAGTCAGGAGTTGCTCGAAGCAGTAGAACAAGAGAGAAGTTTTAGACTTAATCCAGTTAGAAACTCAACAATATTTCGCCATCCCACTTTTGGTGACTTTGAGTTACAGCATCTGCCAGCTGGTGCTGATGATGCTGACCTTGAAGAGCGTATACTCCAACACCTAGCTGCTGCAGCTGCCATGGGACAAGCTCGCCATAGTGCTAGAAGGGAAGGCCACAGACATCGGTCAGGAATTCATGGCCGTCCCCAATTGTTGGTGTTTTCTTCCCCTCCTAATTCTTCATCGACCTCTCCACTTCCTCGTGACAATCGGGAAGGTGAAGCAGCCTCAAGAATCATGGTAGCTACTGTATCACCACCTCAACCTGCTGGAGAAGAGTCTCCACAACTCAATGCTTCAGCATCTCCCGTGCAAACTGATCAGTCTTCTCCATCAGCACCTCAATACAGTTCACGTTCTGCCAGCCAACTTGGATCTCCTTCGAGCGATAGGAGATCCACCAGTCAACCAGTGCCAAGTAGTCAAGATAGAGCCGGGCCATCATCAGAATTGCAATCACTCTCGGATTCACTGAAGTCTCGATTTAATGCAATGTCAATGAGATACAAAGATTCAATCGCAAAGAGCACACGAGGCTGGAAGGAGAAATTGTTCTCTCGCAATACTTCAATGTCAGATATTGGCTCTGAGGTTAGAAGAGAGGTTAATGTTGGAATAGCAACGGTATCACGCATGATGGAACGTCTTGAAACAAGAGATGCTAGAAAAAGTAGCAGTCCTGAGTCCAGTAATGTAGGGGATAACAACCCAGTTTCGGAATCAAATGATAGACGGACACCAAAGAATGGAGGAAACAATCCTTTGAGCGTCTCAAATAAAGAAGGTTCATGCCCTGCAGAATCCAGTTCAAGTTGA

Homology

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BLAST of CmoCh11G009070 vs. Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.2e-113
Identity = 234/385 (60.78%), Postives = 279/385 (72.47%), Query Frame = 1


Query: 8   ETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQ 67
           ET  SE HLTSAAAFV+GGIQDACDDACSICLE+FC+SDPST+TSCKHE+HLQC+LEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 68  RSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGA 127
           RSSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 128 DDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPLPR 187
           D+A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+S  SP P 
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNAS--SPPPH 185

Query: 188 DNREGEAASRIMVATVS--PPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQLGS 247
                  + R    TVS  P    GE S Q N       T   + S P+  S SAS    
Sbjct: 186 PPMPSSPSQRDESDTVSNLPHNALGEGSHQSN-------TQPPTSSHPRQVSPSAS---- 245

Query: 248 PSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFS 307
             S+ R  +Q  PS QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LFS
Sbjct: 246 -DSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFS 305

Query: 308 RNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRT 367
           RNTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+   
Sbjct: 306 RNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNR 365

Query: 368 PKNGGNNPLSVSNKEGSCPAESSSS 391
              G  + ++    + +C   S SS
Sbjct: 366 AAAGDEHSVNERGVKETCATGSGSS 375

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BLAST of CmoCh11G009070 vs. Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37
Identity = 126/334 (37.72%), Postives = 175/334 (52.40%), Query Frame = 1


Query: 17  TSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCW 76
           +S+A  V     +  DDACSICLE F   DPST+TSCKHE+HLQC++EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 77  QPVSLKDPTSQELLEAVEQERSFRLNPVRNST-IFRHPTFGDFELQHLPAGADDADLEER 136
           Q   L+DP SQELL AVE+ER  +   + +S+ I  H +  DF  +     +  +  +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEE--EESQFSSFDEQ 147

Query: 137 ILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPLPRDNREGEAA 196
            L+HL  AA         RR+G    S        LV SS P +   + L    R   A 
Sbjct: 148 FLRHLTEAAHRRCLLR--RRDGQISSS--------LVSSSDPTTIHPTDLVNLYRLS-AI 207

Query: 197 SRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQLGSPSSDRRSTSQ 256
           S +     +P    G  +P      SPV    S P+     SR      SP         
Sbjct: 208 SHVEHQNSNPCPSPGSMTP------SPVSGHSSIPADSNNGSRI-----SPG-------- 267

Query: 257 PVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGS 316
           P PS   ++  S E  SL +++KS+  A S +YK+SI+KS +G KEKL +RN S+ ++  
Sbjct: 268 PSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSK 327

Query: 317 EVRREVNVGIATVSRMMERLETRDARKSSSPESS 350
            V+RE+N GIA V+RM+ER++    R   S   S
Sbjct: 328 GVQREMNAGIAGVARMIERMDFSSKRFGGSAHVS 329

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BLAST of CmoCh11G009070 vs. Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-08
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 1


Query: 29  DACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKD 84
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + V   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

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BLAST of CmoCh11G009070 vs. TrEMBL
Match: A0A0A0M0B5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629730 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 1.6e-180
Identity = 342/390 (87.69%), Postives = 362/390 (92.82%), Query Frame = 1


Query: 1   MESPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60
           MESPTMDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQ +SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFEL 120

Query: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGA+DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSS
Sbjct: 121 QHLPAGANDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSS 180

Query: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240
           STSP   D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SA
Sbjct: 181 STSPSSGDDREGEAAPRIMVASISPPPPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASA 240

Query: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSPSS+RRS+SQPVP++QDRAGP SELQS SDSLKSRFNAMSMRYKDSI KST+GWK
Sbjct: 241 SQLGSPSSERRSSSQPVPNNQDRAGP-SELQSFSDSLKSRFNAMSMRYKDSITKSTKGWK 300

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VG N+PVSES
Sbjct: 301 EKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGGNSPVSES 360

Query: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           N+R  P+NGGN+P + +NKEG   AESSSS
Sbjct: 361 NNRSMPENGGNSPSTDTNKEGPRSAESSSS 389

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BLAST of CmoCh11G009070 vs. TrEMBL
Match: V4SEP8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030283mg PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.7e-124
Identity = 249/388 (64.18%), Postives = 306/388 (78.87%), Query Frame = 1


Query: 6   MDETKNSE-AHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLE 65
           M+E K S+ AHLTSAAAFV+GGIQDACDDACSICLE+F +SDPST+TSCKHEFHLQC+LE
Sbjct: 1   MEENKQSDDAHLTSAAAFVEGGIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILE 60

Query: 66  WCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLP 125
           WCQRSSQCPMCWQP+SLKDPTSQELLEAVE+ERSFRLNP RN+TIFRHPT GDFELQHLP
Sbjct: 61  WCQRSSQCPMCWQPISLKDPTSQELLEAVERERSFRLNPSRNATIFRHPTLGDFELQHLP 120

Query: 126 AGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSP 185
            GA+DA+LEERI+QHLAAAAAMG+ARH ARRE HR R+    RPQ LVFS+ PN+++  P
Sbjct: 121 VGANDAELEERIIQHLAAAAAMGRARHIARRESHRSRASSQARPQFLVFSTHPNAANDDP 180

Query: 186 LPRD--NREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 245
           +     + EGEA+    VAT S P   GEES Q +      Q D +S SA   S+ ++ Q
Sbjct: 181 VSSSPTHLEGEASPITTVATPSSPATGGEESTQQSTHLLSAQADHASASASGSSAFASGQ 240

Query: 246 LGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 305
           +G+  ++RRS +QP P+SQDRAGP S+ QS S+SLKSRFNA+SMRYK+SI+KSTRGWKE+
Sbjct: 241 VGNTLNNRRSPNQPSPNSQDRAGP-SDFQSFSESLKSRFNAVSMRYKESISKSTRGWKER 300

Query: 306 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 365
            FSRN +M+D+G+EVRREVN GI+TVSRMMERLETRD+  S++  S +   NN V E N+
Sbjct: 301 FFSRNNTMADLGTEVRREVNAGISTVSRMMERLETRDS-NSNNTTSVSSSSNNSVPELNN 360

Query: 366 RRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           ++  +    NP++ +N + SC A S S+
Sbjct: 361 QQKSETADTNPMNDTNVQASCAASSGSN 386

[Close]

BLAST of CmoCh11G009070 vs. TrEMBL
Match: A0A061GV15_THECC (RING-H2 group F2A isoform 1 OS=Theobroma cacao GN=TCM_041186 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 4.9e-124
Identity = 260/387 (67.18%), Postives = 300/387 (77.52%), Query Frame = 1


Query: 6   MDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEW 65
           M++TK SEAHLTSAAAFV+GGIQDACDDACSICLE F +SDPST+TSCKHEFHLQC+LEW
Sbjct: 4   MEDTK-SEAHLTSAAAFVEGGIQDACDDACSICLEAFYESDPSTVTSCKHEFHLQCILEW 63

Query: 66  CQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPA 125
           CQRSSQCPMCWQP+SLKDPTSQELLEAVE+ERSFRLNP RN+TIF HPT GDFELQHLP 
Sbjct: 64  CQRSSQCPMCWQPISLKDPTSQELLEAVERERSFRLNPARNATIFHHPTLGDFELQHLPV 123

Query: 126 GADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPL 185
           GA+DA+LEERI+QHLAAAAAMG+ARH ARREG R RS   GRPQ LVFS+ PN+ ST P+
Sbjct: 124 GANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFSTHPNAPSTGPI 183

Query: 186 PRD--NREGEAASRIMVAT-VSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 245
                 REGE A  I V T  SP +  GEES          Q DQ S SA   S    + 
Sbjct: 184 SSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQQSASASGSSVLLVND 243

Query: 246 LGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 305
            G+  ++RRS +Q  P+SQDRAGP SE QS S+SLKSRFNA+SMRYK+SI+KSTRGWKE+
Sbjct: 244 QGNSLNNRRSPNQCSPNSQDRAGP-SEFQSFSESLKSRFNAVSMRYKESISKSTRGWKER 303

Query: 306 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 365
            FSRNTSM+DIGSEVRREVN GIATVSRMMERLETRD R S+S  SS++ D +  +ES++
Sbjct: 304 FFSRNTSMADIGSEVRREVNAGIATVSRMMERLETRDNRTSTSTVSSSLEDRSD-TESDN 363

Query: 366 RRTPKNGGNNPLSVSNKEGSCPAESSS 390
                 GG  PL+ ++ + SC A S S
Sbjct: 364 HPISNAGGETPLTDTSAQASCAASSGS 387

[Close]

BLAST of CmoCh11G009070 vs. TrEMBL
Match: A0A061GZL3_THECC (RING-H2 group F2A isoform 2 OS=Theobroma cacao GN=TCM_041186 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 4.9e-124
Identity = 260/387 (67.18%), Postives = 300/387 (77.52%), Query Frame = 1


Query: 6   MDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEW 65
           M++TK SEAHLTSAAAFV+GGIQDACDDACSICLE F +SDPST+TSCKHEFHLQC+LEW
Sbjct: 1   MEDTK-SEAHLTSAAAFVEGGIQDACDDACSICLEAFYESDPSTVTSCKHEFHLQCILEW 60

Query: 66  CQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPA 125
           CQRSSQCPMCWQP+SLKDPTSQELLEAVE+ERSFRLNP RN+TIF HPT GDFELQHLP 
Sbjct: 61  CQRSSQCPMCWQPISLKDPTSQELLEAVERERSFRLNPARNATIFHHPTLGDFELQHLPV 120

Query: 126 GADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPL 185
           GA+DA+LEERI+QHLAAAAAMG+ARH ARREG R RS   GRPQ LVFS+ PN+ ST P+
Sbjct: 121 GANDAELEERIIQHLAAAAAMGRARHIARREGLRSRSSAQGRPQFLVFSTHPNAPSTGPI 180

Query: 186 PRD--NREGEAASRIMVAT-VSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 245
                 REGE A  I V T  SP +  GEES          Q DQ S SA   S    + 
Sbjct: 181 SSSPTQREGEPAPSITVGTPSSPARTVGEESSASITPLPSAQADQQSASASGSSVLLVND 240

Query: 246 LGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 305
            G+  ++RRS +Q  P+SQDRAGP SE QS S+SLKSRFNA+SMRYK+SI+KSTRGWKE+
Sbjct: 241 QGNSLNNRRSPNQCSPNSQDRAGP-SEFQSFSESLKSRFNAVSMRYKESISKSTRGWKER 300

Query: 306 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 365
            FSRNTSM+DIGSEVRREVN GIATVSRMMERLETRD R S+S  SS++ D +  +ES++
Sbjct: 301 FFSRNTSMADIGSEVRREVNAGIATVSRMMERLETRDNRTSTSTVSSSLEDRSD-TESDN 360

Query: 366 RRTPKNGGNNPLSVSNKEGSCPAESSS 390
                 GG  PL+ ++ + SC A S S
Sbjct: 361 HPISNAGGETPLTDTSAQASCAASSGS 384

[Close]

BLAST of CmoCh11G009070 vs. TrEMBL
Match: A0A067E1G9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016591mg PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 4.9e-124
Identity = 249/388 (64.18%), Postives = 306/388 (78.87%), Query Frame = 1


Query: 6   MDETKNSE-AHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLE 65
           M+E K S+ AHLTSAAAFV+GGIQDACDDACSICLE+F +SDPST+TSCKHEFHLQC+LE
Sbjct: 1   MEENKQSDDAHLTSAAAFVEGGIQDACDDACSICLEDFSESDPSTLTSCKHEFHLQCILE 60

Query: 66  WCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLP 125
           WCQRSSQCPMCWQP+SLKDPTSQELLEAVE+ERSFRLNP RN+TIFRHPT GDFELQHLP
Sbjct: 61  WCQRSSQCPMCWQPISLKDPTSQELLEAVERERSFRLNPSRNATIFRHPTLGDFELQHLP 120

Query: 126 AGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSP 185
            GA+DA+LEERI+QHLAAAAAMG+ARH ARRE HR+R+    RPQ LVFS+ PN+++  P
Sbjct: 121 VGANDAELEERIIQHLAAAAAMGRARHIARRESHRNRASSQARPQFLVFSTHPNAANDDP 180

Query: 186 LPRD--NREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 245
           +     + EGEA+    VAT S P   GEES Q +      Q D  S SA   S+ ++ Q
Sbjct: 181 VSSSPTHLEGEASPITTVATPSSPATGGEESTQQSTHLLSAQADHVSASASGSSAFASGQ 240

Query: 246 LGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 305
           +G+  ++RRS +QP P+SQDRAGP S+ QS S+SLKSRFNA+SMRYK+SI+KSTRGWKE+
Sbjct: 241 VGNTLNNRRSPNQPSPNSQDRAGP-SDFQSFSESLKSRFNAVSMRYKESISKSTRGWKER 300

Query: 306 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 365
            FSRN +M+D+G+EVRREVN GI+TVSRMMERLETRD+  S++  S +   NN V E N+
Sbjct: 301 FFSRNNTMADLGTEVRREVNAGISTVSRMMERLETRDS-NSNNTTSVSSSSNNSVPELNN 360

Query: 366 RRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           ++  +    NP++ +N + SC A S S+
Sbjct: 361 QQKSETADTNPMNDTNVQASCAASSGSN 386

[Close]

BLAST of CmoCh11G009070 vs. TAIR10
Match: AT5G22000.2 (AT5G22000.2 RING-H2 group F2A)

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-113
Identity = 233/384 (60.68%), Postives = 278/384 (72.40%), Query Frame = 1


Query: 9   TKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQR 68
           T  SE HLTSAAAFV+GGIQDACDDACSICLE+FC+SDPST+TSCKHE+HLQC+LEWCQR
Sbjct: 7   TTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQR 66

Query: 69  SSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPAGAD 128
           SSQCPMCWQ +SLKDPTSQELLEAVEQER+FR NP RN+TIFRHPT GDFELQHLP G D
Sbjct: 67  SSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVD 126

Query: 129 DADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPLPRD 188
           +A++EERI+QHLAAAAAMG+ARH  RREGHR RS   G  Q +VFSS PN+S  SP P  
Sbjct: 127 NAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNAS--SPPPHP 186

Query: 189 NREGEAASRIMVATVS--PPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQLGSP 248
                 + R    TVS  P    GE S Q N       T   + S P+  S SAS     
Sbjct: 187 PMPSSPSQRDESDTVSNLPHNALGEGSHQSN-------TQPPTSSHPRQVSPSAS----- 246

Query: 249 SSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSR 308
            S+ R  +Q  PS QDRAGP SELQS S+SLKSR NA+S RYK+SI+K+TR WK++LFSR
Sbjct: 247 DSNSRPLNQSSPSEQDRAGP-SELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSR 306

Query: 309 NTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRTP 368
           NTSM+D+GSEV+REV+ GIATVSRMMERLETR+  + S+   S+V +N+    +N+    
Sbjct: 307 NTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETNNEHNRA 366

Query: 369 KNGGNNPLSVSNKEGSCPAESSSS 391
             G  + ++    + +C   S SS
Sbjct: 367 AAGDEHSVNERGVKETCATGSGSS 375

[Close]

BLAST of CmoCh11G009070 vs. TAIR10
Match: AT4G14220.1 (AT4G14220.1 RING-H2 group F1A)

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 126/334 (37.72%), Postives = 175/334 (52.40%), Query Frame = 1


Query: 17  TSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCW 76
           +S+A  V     +  DDACSICLE F   DPST+TSCKHE+HLQC++EW QRS +CP+CW
Sbjct: 28  SSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICW 87

Query: 77  QPVSLKDPTSQELLEAVEQERSFRLNPVRNST-IFRHPTFGDFELQHLPAGADDADLEER 136
           Q   L+DP SQELL AVE+ER  +   + +S+ I  H +  DF  +     +  +  +E+
Sbjct: 88  QLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEE--EESQFSSFDEQ 147

Query: 137 ILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPLPRDNREGEAA 196
            L+HL  AA         RR+G    S        LV SS P +   + L    R   A 
Sbjct: 148 FLRHLTEAAHRRCLLR--RRDGQISSS--------LVSSSDPTTIHPTDLVNLYRLS-AI 207

Query: 197 SRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQLGSPSSDRRSTSQ 256
           S +     +P    G  +P      SPV    S P+     SR      SP         
Sbjct: 208 SHVEHQNSNPCPSPGSMTP------SPVSGHSSIPADSNNGSRI-----SPG-------- 267

Query: 257 PVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFSRNTSMSDIGS 316
           P PS   ++  S E  SL +++KS+  A S +YK+SI+KS +G KEKL +RN S+ ++  
Sbjct: 268 PSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSK 327

Query: 317 EVRREVNVGIATVSRMMERLETRDARKSSSPESS 350
            V+RE+N GIA V+RM+ER++    R   S   S
Sbjct: 328 GVQREMNAGIAGVARMIERMDFSSKRFGGSAHVS 329

[Close]

BLAST of CmoCh11G009070 vs. TAIR10
Match: AT4G00335.1 (AT4G00335.1 RING-H2 finger B1A)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-09
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 1


Query: 29  DACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQRSSQCPMCWQPVSLKD 84
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + V   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of CmoCh11G009070 vs. TAIR10
Match: AT5G41350.1 (AT5G41350.1 RING/U-box superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 8.8e-08
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 1


Query: 32  DDACSICLENFCDSDPSTMTSCKHEFHLQCVLEWCQRSSQCPMC 76
           ++ C ICLE +   +P  +  C H FHL C+LEW +RS  CP+C
Sbjct: 158 EEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVC 201

[Close]

BLAST of CmoCh11G009070 vs. TAIR10
Match: AT4G12140.1 (AT4G12140.1 RING/U-box superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 1


Query: 33  DACSICLENFCDSDPS--TMTSCKHEFHLQCVLEWCQRSSQCPMC 76
           D+CSICL++   S  +  T  SC H FH  C++EW +R + CPMC
Sbjct: 151 DSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMC 195

[Close]

BLAST of CmoCh11G009070 vs. NCBI nr
Match: gi|659098843|ref|XP_008450319.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Cucumis melo])

HSP 1 Score: 647.1 bits (1668), Expect = 1.9e-182
Identity = 345/390 (88.46%), Postives = 363/390 (93.08%), Query Frame = 1


Query: 1   MESPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60
           MESPTMDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFEL 120

Query: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGA DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSS
Sbjct: 121 QHLPAGASDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSS 180

Query: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240
           STSP P D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SA
Sbjct: 181 STSPPPGDDREGEAAPRIMVASISPPSPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASA 240

Query: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSP S+RRS+SQPVP+SQDRA P SELQS SDSLKSRFNAMSMRYKDSI KSTRGW+
Sbjct: 241 SQLGSPPSERRSSSQPVPNSQDRAEP-SELQSFSDSLKSRFNAMSMRYKDSITKSTRGWR 300

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VGD+NPVSES
Sbjct: 301 EKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGDSNPVSES 360

Query: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           N+R  P+NGGN+ L+ +NKEG  PAESSSS
Sbjct: 361 NNRSMPENGGNSSLTDTNKEGPRPAESSSS 389

[Close]

BLAST of CmoCh11G009070 vs. NCBI nr
Match: gi|659098841|ref|XP_008450318.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucumis melo])

HSP 1 Score: 644.0 bits (1660), Expect = 1.6e-181
Identity = 343/390 (87.95%), Postives = 362/390 (92.82%), Query Frame = 1


Query: 1   MESPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60
           + SPTMDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ
Sbjct: 4   LNSPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 63

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFEL
Sbjct: 64  CVLEWCQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFEL 123

Query: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGA DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSS
Sbjct: 124 QHLPAGASDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSS 183

Query: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240
           STSP P D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SA
Sbjct: 184 STSPPPGDDREGEAAPRIMVASISPPSPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASA 243

Query: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSP S+RRS+SQPVP+SQDRA P SELQS SDSLKSRFNAMSMRYKDSI KSTRGW+
Sbjct: 244 SQLGSPPSERRSSSQPVPNSQDRAEP-SELQSFSDSLKSRFNAMSMRYKDSITKSTRGWR 303

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VGD+NPVSES
Sbjct: 304 EKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGDSNPVSES 363

Query: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           N+R  P+NGGN+ L+ +NKEG  PAESSSS
Sbjct: 364 NNRSMPENGGNSSLTDTNKEGPRPAESSSS 392

[Close]

BLAST of CmoCh11G009070 vs. NCBI nr
Match: gi|659098839|ref|XP_008450317.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucumis melo])

HSP 1 Score: 643.3 bits (1658), Expect = 2.8e-181
Identity = 343/388 (88.40%), Postives = 361/388 (93.04%), Query Frame = 1


Query: 3   SPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCV 62
           SPTMDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCV
Sbjct: 11  SPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCV 70

Query: 63  LEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQH 122
           LEWCQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFELQH
Sbjct: 71  LEWCQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFELQH 130

Query: 123 LPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSST 182
           LPAGA DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSSST
Sbjct: 131 LPAGASDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSSST 190

Query: 183 SPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQ 242
           SP P D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SASQ
Sbjct: 191 SPPPGDDREGEAAPRIMVASISPPSPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASASQ 250

Query: 243 LGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEK 302
           LGSP S+RRS+SQPVP+SQDRA P SELQS SDSLKSRFNAMSMRYKDSI KSTRGW+EK
Sbjct: 251 LGSPPSERRSSSQPVPNSQDRAEP-SELQSFSDSLKSRFNAMSMRYKDSITKSTRGWREK 310

Query: 303 LFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESND 362
           LFSRNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VGD+NPVSESN+
Sbjct: 311 LFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGDSNPVSESNN 370

Query: 363 RRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           R  P+NGGN+ L+ +NKEG  PAESSSS
Sbjct: 371 RSMPENGGNSSLTDTNKEGPRPAESSSS 397

[Close]

BLAST of CmoCh11G009070 vs. NCBI nr
Match: gi|449442598|ref|XP_004139068.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucumis sativus])

HSP 1 Score: 640.2 bits (1650), Expect = 2.4e-180
Identity = 342/390 (87.69%), Postives = 362/390 (92.82%), Query Frame = 1


Query: 1   MESPTMDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60
           MESPTMDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ
Sbjct: 1   MESPTMDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQ 60

Query: 61  CVLEWCQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFEL 120
           CVLEWCQRSSQCPMCWQ +SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFEL
Sbjct: 61  CVLEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFEL 120

Query: 121 QHLPAGADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSS 180
           QHLPAGA+DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSS
Sbjct: 121 QHLPAGANDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSS 180

Query: 181 STSPLPRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSA 240
           STSP   D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SA
Sbjct: 181 STSPSSGDDREGEAAPRIMVASISPPPPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASA 240

Query: 241 SQLGSPSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWK 300
           SQLGSPSS+RRS+SQPVP++QDRAGP SELQS SDSLKSRFNAMSMRYKDSI KST+GWK
Sbjct: 241 SQLGSPSSERRSSSQPVPNNQDRAGP-SELQSFSDSLKSRFNAMSMRYKDSITKSTKGWK 300

Query: 301 EKLFSRNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSES 360
           EKLFSRNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VG N+PVSES
Sbjct: 301 EKLFSRNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGGNSPVSES 360

Query: 361 NDRRTPKNGGNNPLSVSNKEGSCPAESSSS 391
           N+R  P+NGGN+P + +NKEG   AESSSS
Sbjct: 361 NNRSMPENGGNSPSTDTNKEGPRSAESSSS 389

[Close]

BLAST of CmoCh11G009070 vs. NCBI nr
Match: gi|659098845|ref|XP_008450320.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X4 [Cucumis melo])

HSP 1 Score: 637.5 bits (1643), Expect = 1.5e-179
Identity = 340/385 (88.31%), Postives = 358/385 (92.99%), Query Frame = 1


Query: 6   MDETKNSEAHLTSAAAFVKGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEW 65
           MDETK SEAHLTSAAAFV+GGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEW
Sbjct: 1   MDETKKSEAHLTSAAAFVEGGIQDACDDACSICLENFCDSDPSTMTSCKHEFHLQCVLEW 60

Query: 66  CQRSSQCPMCWQPVSLKDPTSQELLEAVEQERSFRLNPVRNSTIFRHPTFGDFELQHLPA 125
           CQRSSQCPMCWQP+SLKDPTSQELLEAVEQERSFRLNP RNSTIFRHPT GDFELQHLPA
Sbjct: 61  CQRSSQCPMCWQPISLKDPTSQELLEAVEQERSFRLNPARNSTIFRHPTLGDFELQHLPA 120

Query: 126 GADDADLEERILQHLAAAAAMGQARHSARREGHRHRSGIHGRPQLLVFSSPPNSSSTSPL 185
           GA DADLEERILQHLAAAAAMGQARHSARRE HR+RSGIHGRPQ LVFSS PNSSSTSP 
Sbjct: 121 GASDADLEERILQHLAAAAAMGQARHSARRESHRNRSGIHGRPQFLVFSSHPNSSSTSPP 180

Query: 186 PRDNREGEAASRIMVATVSPPQPAGEESPQLNASASPVQTDQSSPSAPQYSSRSASQLGS 245
           P D+REGEAA RIMVA++SPP PAGEE+PQ NAS SPVQTDQSSPSAPQ SS SASQLGS
Sbjct: 181 PGDDREGEAAPRIMVASISPPSPAGEEAPQSNASVSPVQTDQSSPSAPQSSSASASQLGS 240

Query: 246 PSSDRRSTSQPVPSSQDRAGPSSELQSLSDSLKSRFNAMSMRYKDSIAKSTRGWKEKLFS 305
           P S+RRS+SQPVP+SQDRA P SELQS SDSLKSRFNAMSMRYKDSI KSTRGW+EKLFS
Sbjct: 241 PPSERRSSSQPVPNSQDRAEP-SELQSFSDSLKSRFNAMSMRYKDSITKSTRGWREKLFS 300

Query: 306 RNTSMSDIGSEVRREVNVGIATVSRMMERLETRDARKSSSPESSNVGDNNPVSESNDRRT 365
           RNTSMSDIGSEVRREVN GIATVSRMMERLETRDARKSSSPESS+VGD+NPVSESN+R  
Sbjct: 301 RNTSMSDIGSEVRREVNAGIATVSRMMERLETRDARKSSSPESSSVGDSNPVSESNNRSM 360

Query: 366 PKNGGNNPLSVSNKEGSCPAESSSS 391
           P+NGGN+ L+ +NKEG  PAESSSS
Sbjct: 361 PENGGNSSLTDTNKEGPRPAESSSS 384

The following BLAST results are available for this feature:

BLAST of CmoCh11G009070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RHF2A_ARATH	7.2e-113	60.78	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1	[more]
RHF1A_ARATH	1.0e-37	37.72	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1	[more]
RHB1A_ARATH	2.8e-08	45.45	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2...	[more]

BLAST of CmoCh11G009070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0B5_CUCSA	1.6e-180	87.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629730 PE=4 SV=1	[more]
V4SEP8_9ROSI	3.7e-124	64.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030283mg PE=4 SV=1	[more]
A0A061GV15_THECC	4.9e-124	67.18	RING-H2 group F2A isoform 1 OS=Theobroma cacao GN=TCM_041186 PE=4 SV=1	[more]
A0A061GZL3_THECC	4.9e-124	67.18	RING-H2 group F2A isoform 2 OS=Theobroma cacao GN=TCM_041186 PE=4 SV=1	[more]
A0A067E1G9_CITSI	4.9e-124	64.18	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016591mg PE=4 SV=1	[more]

BLAST of CmoCh11G009070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22000.2	1.6e-113	60.68	RING-H2 group F2A	[more]
AT4G14220.1	5.6e-39	37.72	RING-H2 group F1A	[more]
AT4G00335.1	1.6e-09	45.45	RING-H2 finger B1A	[more]
AT5G41350.1	8.8e-08	45.45	RING/U-box superfamily protein	[more]
AT4G12140.1	1.7e-06	46.67	RING/U-box superfamily protein	[more]

BLAST of CmoCh11G009070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098843\|ref\|XP_008450319.1\|	1.9e-182	88.46	PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X3 [Cucumis melo]	[more]
gi\|659098841\|ref\|XP_008450318.1\|	1.6e-181	87.95	PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucumis melo]	[more]
gi\|659098839\|ref\|XP_008450317.1\|	2.8e-181	88.40	PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Cucumis melo]	[more]
gi\|449442598\|ref\|XP_004139068.1\|	2.4e-180	87.69	PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Cucumis sativus]	[more]
gi\|659098845\|ref\|XP_008450320.1\|	1.5e-179	88.31	PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0044265	cellular macromolecule catabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0055046	microgametogenesis
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0007165	signal transduction
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0032787	monocarboxylic acid metabolic process
biological_process	GO:0048229	gametophyte development
cellular_component	GO:0044464	cell part
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009070.1	CmoCh11G009070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 34..75 score: 8.
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 35..75 score: 3.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 35..75 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 32..86 score: 4.1
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 6..173 score: 8.0E
None	No IPR available	PANTHER	PTHR22763:SF47	SUBFAMILY NOT NAMED	coord: 6..173 score: 8.0E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 28..83 score: 4.86

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G009070	Cucsa.355720	Cucumber (Gy14) v1	cgycmoB0973
CmoCh11G009070	CmaCh10G008790	Cucurbita maxima (Rimu)	cmacmoB074
CmoCh11G009070	CmaCh11G008930	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G009070	Cla007338	Watermelon (97103) v1	cmowmB089
CmoCh11G009070	Csa1G629730	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G009070	MELO3C015094	Melon (DHL92) v3.5.1	cmomeB097
CmoCh11G009070	ClCG03G012410	Watermelon (Charleston Gray)	cmowcgB101
CmoCh11G009070	CSPI01G31220	Wild cucumber (PI 183967)	cmocpiB078
CmoCh11G009070	Lsi06G006010	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G009070	Cp4.1LG18g01980	Cucurbita pepo (Zucchini)	cmocpeB104
CmoCh11G009070	Cp4.1LG04g12500	Cucurbita pepo (Zucchini)	cmocpeB129
CmoCh11G009070	MELO3C015094.2	Melon (DHL92) v3.6.1	cmomedB104
CmoCh11G009070	CsaV3_1G043600	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G009070	Cla97C03G062740	Watermelon (97103) v2	cmowmbB100
CmoCh11G009070	Bhi02G001228	Wax gourd	cmowgoB0159
CmoCh11G009070	CsGy1G030410	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G009070	Carg17849	Silver-seed gourd	carcmoB1298
CmoCh11G009070	Carg25977	Silver-seed gourd	carcmoB1201

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G009070	CmoCh10G009200	Cucurbita moschata (Rifu)	cmocmoB044

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G009070	Cucurbita moschata (Rifu)	cmocmoB118
CmoCh11G009070	Cucurbita maxima (Rimu)	cmacmoB574
CmoCh11G009070	Cucurbita pepo (Zucchini)	cmocpeB134
CmoCh11G009070	Silver-seed gourd	carcmoB1228