CmoCh11G007770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGGTTCTTCTTCCTGATTCAGGCGGGTCGAGATTGAGAATCACCCGTTCATGGGATGCTGCCAATGGCGACTGCAATCAGAAAGCCCAGCCTTTGACCGAAGTTGACTACGAAGATTGTCAACATTACGATACAGTGGCAACATAGGTAAACGACTCTGTGAAAATCTTCTTCGAAAATTGTTTCTTCATCATCTTCTTTCATTGTCGTTTGATTTCCAACAGTTCGAAGCAAAAAAATCCCATCACAGATCGTCGATGTGATCCTTTTCCTTAACCCTAATTTTGCAGAACCCTTTTGCCCAAATCATTCATTTGTTCTCTCTATCTCTCACGAACCTTTCTTCTTAGATCTGCCATTTCTAGGTTTCCGCTTCTTTTCTGGTATGGTGTTGGTTTTGAAGTCATTTGGCGGGTTATTTTTGCGTCGATTTCTGTTCAAATCGGGGTTCGTTCGCTTCAATTTCTGTGGGTTTTTGTTTGTTTGTTATTGTTTTTTGTAAAACCAATTGACCTAGGAGGAGAGATAAGAGATTCCGGTAATTTGAATCGAAATTATGGTGTAAATTTCGATAATTACCCGCAGATATTTCCATTTTTTAGATGAGTCTCTGTATCTATATTTGTTGTATTTTACACAGTTGCAGACGCTGAAAGGAATTATTAGTAGAATCTGAGTCAGAGCTGGGAGTGGGAGATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGTAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGCACCTTTGTTCCTCTATCTCTTTTCTCTGTTCATCGTCTTCCTCCACTTCTACTTTTTAGTTCATCTCTGTGATCTCCTGTTCAACTTTTTGCTAATTGTACTCATCCTGCCTTTCAGGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTAAATTCCGTTTCCTGCTACCATATCTGTTGTTTTTCTTCTCGAGATTCCAACTTTCTTTAATTTCCCACTTTTGTTTTGTTCTTCAAAGTACTCTCTCTAGCTTTTCTGTTTGAATCTGTCAAATTAGGCCTTGTTGATCTAGAATTTCGCTTAAAATTTGCAACAGTTCTTCAGAAAAAGCTGACAGATCCACATTCTTCGAATGATTCTGTACTTTTCAAATTTTTCTTTGATTGAAGTTCTACTTCAACCCAGTTCGTTTCAGTTTACAGATTCTTTATTGATAGCTTCTGATGCTCAAGAACAATATGAACTCTTATCAAAATGGAAGAATGAAATCAATTGAAATATGGGTTTGTAAATGCAGTCATTTCCTTGATCTGTGTCCTTTTTAGGAAAAGATAAAAGAAACAAATTCCGTCTTTATGTTCTTGATGACCCTTTATAGCCTTCCATTTGACAATACTTCCAAATGCGTTTTTCCAAATATGAGCAGTTGCCTAAAATTATGCTCTTATTAATGGAGATTCCGAACTGTTTGATTTGACCTTTTTTTTGTTCTTTCTTTCTTTTTAAAGTATTTTTCATTCACCTGTTTCATTGTCCATAGTAATGACAAACCAATGGCTACTTGCAAAATATTCAAGTTTATAAAAGTCTAGGAAACCAAAAGCATTAATATGGCACATTACTATTCAAATCATTAGCATGAACATGTGAAAGACATGGGATATTATAGTATATAATGATTTTCGTAGTTTTACTAGATTTCGATCATGGCAATGTTTAATTTTTCTCATTTTTATAATTTTTTGTATTATGCATCATATGCTTTCACTAAAGCCAACTCTGTGCCATGAATTACATCATAAATTATTCATACAGTCATGTGTGCAATTTGATTTAATTTCGTTTTGAACCGTGGCTCGTAAATCGTGCCTACACCTTGGTTTACTTAGTTTCAGACAGAATGATGCACATCAGCCATTAGGGTAGTCTGGAGTGAAGTGGCTAGACACTGAAACAAAAGACATGGCTGAACTTGTTGGCTTTAGTTATCAAAAACATTTTCCAATTCTGAGATCAAACCTTGAAACTGGATGTGTTGCTTAAGTTAGGCCAAGGCTTGTATTTAGTGTTGGAAGTATTTTTCGACAATTTCATTGATGATTGAAATTTACAAAAGGGATGTATTATCCATGGTGTTTACAAAAGACCTTCCCAATTTACCGTGAGGATAACTGTAGGATATAGTTTGGTAAAAACAACATTGTCGAAAATTTTTGTGTAGGTCTGTGTCTTTTCTGCAAATATTCTCTGAGTGTTTTCTATCACCAAGAAGTGTTTTCCATCGTCTCAAAACAAAAACATGTTTCTGGTCAAGAAAAATGCATGTTCTAGCTGTTCTCGGTGTGCTCGTGATAGATATTCTCCAGGAATCTATAAGGAGAGAAGAGAGTGCTGATGTAGAATAGCTCATACCCTTCACGTCTGCAGTAACCAGCCTTTTAAAAGTTCTATCTTTTCTATCTCCGTCTTTGGCCATCCATTACCACCTTCTCCATTACCAAGGAGTTGGACCATAATCTCCCTACAGGCTGCCATTGTGCGGCAGCAGATTACAACCACCTCAGGCTCCATAGCCCCTTCATATACCAGACAGTTCAGCAACCCCTCTTTTGATCCCTTTGGAGTGTCATCTTCACGTGTCAGTTCACGGAAGTCGAATTTCCAGTTCTCTTATTCCCAGTCTCTCATGCTCTGGCCCTTGTAACATTGCTTGTTGAATCTACAATAAGCTTCCACGTGCGCTACAGATCTCCAATACTCCCACGTTTCTACTTTAGGGTGTACTTTTGTTTGAAGTTTTTTAAACATAGACGTGAGTATGTCGTGTAGTTTTACGCGTGTAAACGAACTTTCTATATCTTATAATATCAGTCTGGATCTGAACTTTGGCTGATTTCAGCTCTCATTTATTCTTATTTTGATCATTTTCGGTTCCGTTACAAATTCGAATTAATGCTGAATGATTCAAATTTTGGGATTAGAGGGTTGATAGTTTGACCTCTTCAGCTATAGACTACTGAGTTCACTGTTGCCTTCTTCTGGATTGTGTGGCTTGAGATTAGGATTTTGGGGAATTGGTGCACGCATCTACTTTATTAATTCTTTTTCTTTGATAAACATTGATGTTTTGTTGGAATTCTTCTCCTTTTTTTTTTTTGGCGCCTCAAAGAAAAGAAAAAAAGATTTTTAAGATCTGGAATGTGTGGTTGTAAATAGAGCTGGTTTTCGTTGTGTTAACTGGGCAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGTTTTCTGCTGCTCGTGGTCGTGGCGAGCTTCTCATTATGCCTTTTCACGGGATTACTTCCATTGTTTCTCTTCTAACACAATTTCATACTGTTTTCTTTTGCCCAAACTAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTAATTATACAAAAAACTGAGCTTAAGATCCTTATTTGATCTGGTTTTGTCTGTCTTGAACCCCATGGTGCATTTCTTCAGTGTCTTGATATGAAACTCGTCATATCCGTATCGGTTGCAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGAACACTATAGGCCCGGGGGGTTTGTGGTGAATAATTTCGGTTAATGTTTGTGTAGATGATGTTCGAGTAGGGTTGAAATTGTGGTGGGTGTGGTTTGATATTGTGTTGTCGTTGTCGTCGTCGTCGTCTTGATTTTCTAGTTCTAAGTCTGAATAATCCATGCTGCTTGATCAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTATTCTTCTTCCATGAATAACACAAGAGAGGGGAAAGAAAGAAAGAAAGAAAGAAAGCGATGCTTGTAATTGTCACTTTATAATAATGGTGAGTTCAGGTG TTGGGTTCTTCTTCCTGATTCAGGCGGGTCGAGATTGAGAATCACCCGTTCATGGGATGCTGCCAATGGCGACTGCAATCAGAAAGCCCAGCCTTTGACCGAAGTTGACTACGAAGATTGTCAACATTACGATACAGTGGCAACATAGTTGCAGACGCTGAAAGGAATTATTAGTAGAATCTGAGTCAGAGCTGGGAGTGGGAGATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGTAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGAACACTATAGGCCCGGGGGGTTTGTGGTGAATAATTTCGGTTAATGTTTGTGTAGATGATGTTCGAGTAGGGTTGAAATTGTGGTGGGTGTGGTTTGATATTGTGTTGTCGTTGTCGTCGTCGTCGTCTTGATTTTCTAGTTCTAAGTCTGAATAATCCATGCTGCTTGATCAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTATTCTTCTTCCATGAATAACACAAGAGAGGGGAAAGAAAGAAAGAAAGAAAGAAAGCGATGCTTGTAATTGTCACTTTATAATAATGGTGAGTTCAGGTG ATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGTAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGA
BLAST of CmoCh11G007770 vs. Swiss-Prot
Match: PUR_ARATH (Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana GN=PURA1 PE=1 SV=2) HSP 1 Score: 454.1 bits (1167), Expect = 1.2e-126 Identity = 239/306 (78.10%), Postives = 264/306 (86.27%), Query Frame = 1
BLAST of CmoCh11G007770 vs. Swiss-Prot
Match: PURA_MOUSE (Transcriptional activator protein Pur-alpha OS=Mus musculus GN=Pura PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 7.6e-17 Identity = 85/297 (28.62%), Postives = 125/297 (42.09%), Query Frame = 1
BLAST of CmoCh11G007770 vs. Swiss-Prot
Match: PURB_DANRE (Transcriptional activator protein Pur-beta OS=Danio rerio GN=purb PE=2 SV=3) HSP 1 Score: 89.4 bits (220), Expect = 7.6e-17 Identity = 83/295 (28.14%), Postives = 118/295 (40.00%), Query Frame = 1
BLAST of CmoCh11G007770 vs. Swiss-Prot
Match: PURA_HUMAN (Transcriptional activator protein Pur-alpha OS=Homo sapiens GN=PURA PE=1 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 9.9e-17 Identity = 85/298 (28.52%), Postives = 125/298 (41.95%), Query Frame = 1
BLAST of CmoCh11G007770 vs. Swiss-Prot
Match: PURB_MOUSE (Transcriptional activator protein Pur-beta OS=Mus musculus GN=Purb PE=1 SV=3) HSP 1 Score: 86.7 bits (213), Expect = 4.9e-16 Identity = 87/300 (29.00%), Postives = 125/300 (41.67%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TrEMBL
Match: A0A0A0LZP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598870 PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 2.3e-161 Identity = 294/305 (96.39%), Postives = 296/305 (97.05%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TrEMBL
Match: A0A061GR22_THECC (Transcription factor Pur-alpha 1 OS=Theobroma cacao GN=TCM_039973 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 2.5e-144 Identity = 269/308 (87.34%), Postives = 282/308 (91.56%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TrEMBL
Match: A0A067KEG7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16210 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 3.3e-144 Identity = 267/306 (87.25%), Postives = 284/306 (92.81%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TrEMBL
Match: A0A067EUD4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022247mg PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 9.6e-144 Identity = 265/307 (86.32%), Postives = 279/307 (90.88%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TrEMBL
Match: V4VZ56_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016090mg PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 9.6e-144 Identity = 265/307 (86.32%), Postives = 279/307 (90.88%), Query Frame = 1
BLAST of CmoCh11G007770 vs. TAIR10
Match: AT2G32080.1 (AT2G32080.1 purin-rich alpha 1) HSP 1 Score: 454.1 bits (1167), Expect = 6.6e-128 Identity = 239/306 (78.10%), Postives = 264/306 (86.27%), Query Frame = 1
BLAST of CmoCh11G007770 vs. NCBI nr
Match: gi|778663268|ref|XP_011660046.1| (PREDICTED: transcription factor Pur-alpha 1 [Cucumis sativus]) HSP 1 Score: 576.2 bits (1484), Expect = 3.3e-161 Identity = 294/305 (96.39%), Postives = 296/305 (97.05%), Query Frame = 1
BLAST of CmoCh11G007770 vs. NCBI nr
Match: gi|659100199|ref|XP_008450978.1| (PREDICTED: transcription factor Pur-alpha 1 [Cucumis melo]) HSP 1 Score: 572.8 bits (1475), Expect = 3.6e-160 Identity = 292/305 (95.74%), Postives = 295/305 (96.72%), Query Frame = 1
BLAST of CmoCh11G007770 vs. NCBI nr
Match: gi|802659472|ref|XP_012080845.1| (PREDICTED: transcription factor Pur-alpha 1 isoform X2 [Jatropha curcas]) HSP 1 Score: 523.9 bits (1348), Expect = 1.9e-145 Identity = 267/305 (87.54%), Postives = 284/305 (93.11%), Query Frame = 1
BLAST of CmoCh11G007770 vs. NCBI nr
Match: gi|1009132890|ref|XP_015883613.1| (PREDICTED: transcription factor Pur-alpha 1 [Ziziphus jujuba]) HSP 1 Score: 523.5 bits (1347), Expect = 2.5e-145 Identity = 268/309 (86.73%), Postives = 283/309 (91.59%), Query Frame = 1
BLAST of CmoCh11G007770 vs. NCBI nr
Match: gi|590582554|ref|XP_007014656.1| (Transcription factor Pur-alpha 1 [Theobroma cacao]) HSP 1 Score: 519.6 bits (1337), Expect = 3.6e-144 Identity = 269/308 (87.34%), Postives = 282/308 (91.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |