Carg25194 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGAAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGCACCTTTGTTCCTCTATCTCTTTTCTCTGTTCATCGTCTTCCTCCACTTCTACTTTTTAGTTCATCTCTGTGATCTCCTGTTCAACTTTTTGCTAATTGTACTCATCCTGCCTTTCAGGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTAAATTCCGTTTCCTGCTACCATATCTGTTGTTTTTCTTCTCGAGATTCCAACTTTCTTTAATTTCCCACTTTTGTTTTGTTCTTCAAAGTACTCTCTCTAGCTTTTCTGTTTGAATCTGTCAAATTAGGCCTTGTTGATCTAGAATTTCGCTTAAAATTTGCAACAGTTCTTCAGAAAAAGCTGACAGATCCACATTCTTCGAATGATTCTGTACTTTTCAAATTTTTCTTTGATTGAAGTTCTACTTCAACCCAGTTCGTTTCAGTTTACAGATTCTTTATTGATAGCTTCTGATGCTCAAGAACAATATGAACTCTTATCAAAATGGAAGAATGAAATCAATTGAAATATGGGTTTGTAAATGCAGTCATATCCTTGATCTGTGTCCTTTTTAGGAAAAGATAAAAGAAACAAATTCCGTCTTTATGTTCTTGATGACCCTTTATAGCCTTCCATTTGACAATACTTCCAAATGCGTTTTTCCAAATATGAGCAGTTGCCTAAAATTATGCTCTTATTAATGGAGATTCCGAACTGTTTGATTTGACCTTTTTTTTGTTCTTTCTTTCTTTTTAAAGTATTTTTCATTCACCTGTTTCATTGTCCATAGTAATGACAAACCAATGGCTACTTGCAAAATATTCAAGTTTATAAAAGTCTAGGAAACCAAAAGCATTAATATGGCACATTACTATTCAAATCATTAGCATGAACATGTGAAAGACATGGGATATTATAGTATATAATGATTTTCGTAGTTTTACTAGATTTCGATCATGGCAATGTTTAATTTTTCTCATTTTTATAATTTTTTGTATTATGCATCATATGCTTCCACTAAAGCCAACTCTGTGCCATGAATTGCATTATAAATTATTCACACAGTCACGTGTGCAATTTGATTTAATTTCGTTTTGAACCGTGGCTCGTAAATCGTGTCTACACCTTGGTTTACTTAGTTTCAGACAGAATGATGCACATCAGCCATTAGGGTAGTCTGGAGTGAAGTGGCTAGACACTGAAACAAAAGACATGGCTGAACTTGTTGGCTTTAGTTATCAAAAACATTTTCCAATTCTGAGATCAAACCTTGAAACTGGATGTGTTGCTTAAGTTAGGCCAAGGCTTGTATGTAGTGTTGGAAGTATTTTTCGACAATTTCATTGATGATTGAAATTTACAAAAGGGATGTATTATCCATGGTGTTTATAAAAGACCTTCCCAATTTACCGTGAGGATAACTGTAGGATATAGTTTGGTAAAAACAACATTGTCGAAAAATTTTGTGTAGGTCTGTGTCTTTTCTGCAAATATTCTCTGAGTGTTTTCTATCACCAAGAAGTGTTTTCCATCGTCTCAAAACAAAAACATGTTTCTGGTCAAGAAAAATGCATGTTCTAGCTGTTCTCGGTGTGCTCGTGATAGATATTCTCCAGGAATCTATAAGGAGAGAAGAGAGTGCTGATGTAGAATAGCTCATACCCTTCACGTCTGCAGTAACCAGCCTTTTAAAAGTTCTATCTTTTCTATCTCCGTCTTTGGCCATCCATTACCACCTTCTCCATTACCAAGGAGTTGGACCATAATCTCCCTACAGGCTGCCATTGTGCGGCAGCAGATTACAACCACCTCAGGCTCCATAGCCCCTTCATACCAGACAGTTCAGCAACCCCTCTTTTGATCCCTTTGGAGTGTCATCTTCACGTGTCAGTTCACGTAAGTCGAATTTCCAGTTCTCTTATTCCCAGTCTCTCATGCTCTGGCCCTTGTAACATTGCTTGTTGAATCTACAATAAGCTTCCACGTGCGCTACAGATCTCCAATACTCCCACGTTTCTACTTTAGGGTGTACTTTTGTTTGAAGTTTTTTAAACATAGACGTGAGTATGTCGTGTAGTTTTACGCGTGTAAACGAACTTTCTATATCTTATAATATCAGTCTGGATCTGAACTTTGGCTGATTTCAGCTCTCATTTATTCTTATTTTGATCATTTTCGGTTCCGTTACAAATTCGAATTAATGCTGAATGATTCAAATTTTGGGATTAGAGGGTTGATAGTTTGACCTCTTCAGCTATAGACTACTGAGTTCACTGTTGCCTTCTTCTGGATTGTGTGGCTTGAGATTAGGATTTTGGGGAATTGGTGCACGCATCTACTTTATTAATTCTTTTTCTTTGATAAACATTGATGTTTTGTTGGAATTCTTCTCCTTTTTTTTTTTTGGCGCCTCAAAGAAAAGAAAAAAAGATTTTTAAGATCTGGAATGTGTGGTTGTAAATAGAGCTGGTTTTCGTTGTGTTAACTGGGCAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGTTTTCTGCTGCTCGTGGTCGTGGCGAGCTTCTCATTATGCCTTTTCACGGGATTACTTCCATTGTTTCTCTTCTAACACAATTTCATACTGTTTTCTTTTGCCCAAACTAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTAATTATACAAAAAACTGAGCTTAAGATCCTTATTTGATCTGGTTTTGTCTGTCTTGAACCCCATGGTGCATTTCTTCAGTGTCTTGATATGAAACTCGTCATATCCGTATCGGTTGCAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGAACACTATAGGCCCAGGGGGGTTTGTGGTGAATAATTTCGGTTAATGTTTGTGTAGATGATGTTCGAGTAGGGTTGAAATTGTGGTGGGTGTGGTTTGATATTGTGTCGTCGTCGTCGTCTTGATTTTCTAGTTCTAAGTCTGAATAATCCATGCTGCTTGATCAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTATTCTTCTTCCATGAATAACACAAGAGAGGGGAAAGAAAGAAAGAAAGAAAGAAAGAAACGATGCTTGTAATTGTCACTTTATAATAATGGTGTGTTCAGGTGTGTTT ATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGAAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGCACCTTTGTTCCTCTATCTCTTTTCTCTGTTCATCGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGAACACTATAGGCCCAGGGGGGTTTGTGGTGAATAATTTCGGTTAATGTTTGTGTAGATGATGTTCGAGTAGGGTTGAAATTGTGGTGGGTGTGGTTTGATATTGTGTCGTCGTCGTCGTCTTGATTTTCTAGTTCTAAGTCTGAATAATCCATGCTGCTTGATCAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTATTCTTCTTCCATGAATAACACAAGAGAGGGGAAAGAAAGAAAGAAAGAAAGAAAGAAACGATGCTTGTAATTGTCACTTTATAATAATGGTGTGTTCAGGTGTGTTT ATGGAGGGGAGTTCCGGCGGAGGTGGAGTGAGTATTGGGGGAACGACGGCGGGCAGCGTGGCGGTGGGTGGAGTGACGGGTGGCGGCGGCGGAGGAGGAAACGACGTGGAGTTGATGTGCAAAACATTGCAGGTGGAGCACAAATTGTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATCTGAAGATTTCAGAGAAGACGTCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCTGATGATCCGGAGGTTTTTAGCAAGGAATTGCAGCTCGACACCAAGGCACCTTTGTTCCTCTATCTCTTTTCTCTGTTCATCGTGTTCTACTTTGACATTGGTGAAAATCGTAGGGGTCGATTCTTGAAGGTATCTGAAGCTTCTGTCAGTAGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAATCGGGACGAGGGATGGACTGCGTTCAGAAACATTTTGGCAGAGATCAATGAAGCGTCTAGGCTTTTCATACTGCCCAATCAGGAAAATTCCGAACATTCAGAACGTCTAGTCGGACTTTCGGATGATGTAGGTGCTGGCTTCATATCAGGTCATAGTAGTCAACCTGGTCCAACCTCTGACTTGAATGTAGACAGACAAGTAGACTTATCAGCTCAAGATGAAATGGGCAATCTGGGGGTATCAAAAGTTATCCGAGCTGATCAGAAGCGATTCTTTTTCGATCTTGGAAGTAACAACCGGGGTCATTTTTTGAGGATATCTGAGGTTGCAGGGGCAGATCGTTCTTCGATCATTCTCCCATTGTCGGGGCTAAAGCAGTTCTATGAAATAGTTGGACATTTCGTGGAGATCACCAAAGATAGGATTGAAGGAATGACGGGCGTGAATGTTAGGACGGTGGATCCGCCTCATAGATGA MEGSSGGGGVSIGGTTAGSVAVGGVTGGGGGGGNDVELMCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGIPWFLDLFNYYINSDDPEVFSKELQLDTKAPLFLYLFSLFIVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSNRDEGWTAFRNILAEINEASRLFILPNQENSEHSERLVGLSDDVGAGFISGHSSQPGPTSDLNVDRQVDLSAQDEMGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEVAGADRSSIILPLSGLKQFYEIVGHFVEITKDRIEGMTGVNVRTVDPPHR
BLAST of Carg25194 vs. NCBI nr
Match: XP_022929520.1 (transcription factor Pur-alpha 1-like [Cucurbita moschata]) HSP 1 Score: 536.6 bits (1381), Expect = 5.8e-149 Identity = 270/282 (95.74%), Postives = 270/282 (95.74%), Query Frame = 0
BLAST of Carg25194 vs. NCBI nr
Match: XP_022967890.1 (transcription factor Pur-alpha 1-like [Cucurbita maxima]) HSP 1 Score: 536.6 bits (1381), Expect = 5.8e-149 Identity = 270/282 (95.74%), Postives = 270/282 (95.74%), Query Frame = 0
BLAST of Carg25194 vs. NCBI nr
Match: XP_023531642.1 (transcription factor Pur-alpha 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 536.6 bits (1381), Expect = 5.8e-149 Identity = 270/282 (95.74%), Postives = 270/282 (95.74%), Query Frame = 0
BLAST of Carg25194 vs. NCBI nr
Match: XP_016900994.1 (PREDICTED: transcription factor Pur-alpha 1 isoform X1 [Cucumis melo] >XP_016900995.1 PREDICTED: transcription factor Pur-alpha 1 isoform X1 [Cucumis melo]) HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147 Identity = 274/303 (90.43%), Postives = 276/303 (91.09%), Query Frame = 0
BLAST of Carg25194 vs. NCBI nr
Match: XP_022960667.1 (transcription factor Pur-alpha 1-like [Cucurbita moschata] >XP_023516300.1 transcription factor Pur-alpha 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146 Identity = 265/282 (93.97%), Postives = 268/282 (95.04%), Query Frame = 0
BLAST of Carg25194 vs. TAIR10
Match: AT2G32080.1 (purin-rich alpha 1) HSP 1 Score: 427.9 bits (1099), Expect = 5.3e-120 Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 0
BLAST of Carg25194 vs. Swiss-Prot
Match: sp|Q9SKZ1|PUR_ARATH (Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PURA1 PE=1 SV=2) HSP 1 Score: 427.9 bits (1099), Expect = 9.5e-119 Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 0
BLAST of Carg25194 vs. Swiss-Prot
Match: sp|Q6PHK6|PURB_DANRE (Transcriptional activator protein Pur-beta OS=Danio rerio OX=7955 GN=purb PE=2 SV=3) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18 Identity = 84/276 (30.43%), Postives = 119/276 (43.12%), Query Frame = 0
BLAST of Carg25194 vs. Swiss-Prot
Match: sp|Q6PAC9|PURBA_XENLA (Transcriptional activator protein Pur-beta-A OS=Xenopus laevis OX=8355 GN=purb-a PE=2 SV=3) HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15 Identity = 76/265 (28.68%), Postives = 115/265 (43.40%), Query Frame = 0
BLAST of Carg25194 vs. Swiss-Prot
Match: sp|Q8AVS4|PURBB_XENLA (Transcriptional activator protein Pur-beta-B OS=Xenopus laevis OX=8355 GN=purb-b PE=2 SV=3) HSP 1 Score: 83.6 bits (205), Expect = 4.4e-15 Identity = 76/265 (28.68%), Postives = 113/265 (42.64%), Query Frame = 0
BLAST of Carg25194 vs. Swiss-Prot
Match: sp|Q00577|PURA_HUMAN (Transcriptional activator protein Pur-alpha OS=Homo sapiens OX=9606 GN=PURA PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14 Identity = 68/250 (27.20%), Postives = 101/250 (40.40%), Query Frame = 0
BLAST of Carg25194 vs. TrEMBL
Match: tr|A0A1S4DZ49|A0A1S4DZ49_CUCME (transcription factor Pur-alpha 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492403 PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 7.3e-148 Identity = 274/303 (90.43%), Postives = 276/303 (91.09%), Query Frame = 0
BLAST of Carg25194 vs. TrEMBL
Match: tr|A0A0A0LZP1|A0A0A0LZP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598870 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 2.3e-146 Identity = 266/282 (94.33%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of Carg25194 vs. TrEMBL
Match: tr|A0A1S3BPW8|A0A1S3BPW8_CUCME (transcription factor Pur-alpha 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492403 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 5.2e-146 Identity = 265/282 (93.97%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of Carg25194 vs. TrEMBL
Match: tr|F6GUS0|F6GUS0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00040 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.2e-137 Identity = 252/297 (84.85%), Postives = 267/297 (89.90%), Query Frame = 0
BLAST of Carg25194 vs. TrEMBL
Match: tr|A0A061GR22|A0A061GR22_THECC (Transcription factor Pur-alpha 1 OS=Theobroma cacao OX=3641 GN=TCM_039973 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 3.2e-135 Identity = 247/282 (87.59%), Postives = 257/282 (91.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |