Carg12923 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACACTCGCAGTCGCGGGGAATTATTAGTAGAAATTGAGTCGGAGCTGGGGGTGGGAGATGGAGGGGAATTCCGGCGGAGGGGGAGCGGGAATTGGGGGAACGACTGCCGGCGGCGTGGCGGCAGGAGGAGTATCGGGCGGCGGTGGCGGCGGCGGAGGGAACGACGTGGAGCTGATGTGCAAAACGCTGCAGGTGGAACACAAGCTTTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATTTGAAGATATCAGAGAAAACATCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCCGATGATCCAGAGGTTTTTAGCAAGGAATTGCAGCTCGACACAAAGGTAATCTTTGTGTTTCTCTTCTTCATTTCTTCTTCTTTTTGATTCATCTCTCTGTTCTAGTGGTCGATTTTTACATTTTTTGTGTACTCATCCTGCCTTTCAGGTGTTTTATTTCGACATCGGCGAGAATCGGAGGGGTCGTTTCTTGAAGGTAAATTGCTTTTCTTGCTGTTCGATTCTGTCAAATCATTGTTGGATGAATCTGCATAGATTGGAGAATGGGATTAGTCTTGTTGGTCTGGAATTTCCCTTAAAATTTGCAACTGTTCTTCAGAAAAATCTGACATTGCTGCATATCTTTTCTCCTGATGATATTGTCCTGATGTTTTTGTTTGGTTGAAGTTCTACTTCTGCCCTGTTCTTCAGCTTACAGCTTTTGTATTTACAGTTTTTAGCGCCCGAGAAATGAACACTTACAAGAGAAGAAAAAGAATGAAATTAATTGAACTATGAGTTCGCTAAGCGGTCATATTGAACACAACTTTTGGTAGGAAATACTCGCACATTTTATTAACACCAATCAAGAAGAGATTACAAGACACTATAGAAACTATTGTACTCTGTGTTTTGTACTTCTTTTGTCTGCGCTTTGTACTTTTTGGGATAAAAACATTGGTAGGGTGGAAGGGTATTTATAGCCGAGACTATACAATTTATTCCCAAAATACCTAAATAATTTTCCTGAAATAATTAGGTATATTTATTCCTAAAATAAAGTCGTTTTCCTAAAATGTATAGACAATCCGCTCTTACGATTATTGGACTTGACCTTACTGGGCCAGTGATGATATTGTAACATCATATTCCATGTTCTGTTTCCTTTTTAAGAAATCATTCTTTGTTTTCTTGATTACTTTTATAGCTTCCATTTGACAAAACTTCCAAATGCATTTTTCCAAATATGAACTGTACAATGATTAATAGAGATTCCTGAACAGTTTGATTTCACTTTTTCTTTTTCTTTTTTGGTTCTTCTTCCTTTTTTCAAAAAATACTTTTCGTTTATCTGTTTCGATTACTTATTCATCTGTTTCGGTCATTGGCGTACTTACGAGAAGCCAAAGGTTATTAGCAAAATGTTTAGGCTTATGAAAGTCTAGGAAACAAAAAGGCATGAACATGTTGGCGCCTGACTGTTAAGGACATGGAATATAGAAAATGTTTTCTTAGTATATATAATTTTATGTAACATATAATGATATTAATGCAGTTGTGCATTTTGTTTTATTTTTTTTAAAAAAAGTTTTATGGAAATTGATAACGAAGACACTTTCTCAGCAACATGAGTACATAATCGAGGTTCATGTTAAACGTGAAACTCGAGTATTTACATGCAATTATATGCTTGTATAATGAGTTCGCACAAACTAGAAAGTTCCTTTTCGAACATTATTTACTGAAATCTCCAGATTTTATCGTTTGCGACGAATTTAAAAAAGGTTCTCCATTCATTAGTTTTACTTCACTTCAATCACAGCCTTGTCTAATTTTATTATTTCTTGTACATGTGTGATTCCCATCTTGATGTTGGATGCATAAAAGGTTATAACATGTAAATGTGGACATATTACCCAAGAAGTGTGTCATCCATGCTTCATATGCTTCCACTAGAGCCAACTCCATGAGATCCCATATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTACTAGACGCGTTTTAAAAACGTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTACTAGCAGTGGGCTTGGGTCGTTACAAACTCTGTGCCACTAATACATTATAACTGATTCATACAGTTGTGCCTGACTTGATTTAATTTATATTTGAAGCATGGTTTGTAACTAGTGTGTACACCCTGATTACTTGGTAACTAGCTTTTCATCCTGAATCTACTGATAAATCTATTTTCCATTCCTGTCTTATATTATTTTTTGTCTAGAGCTGCAAGCATTTCCTGCACACTTTAAGTTCCCTCTTGCACATAACTCCTTAATTTTTGTTTTTGATTATTGTTCTCGGAATGGATTACTTGACCACAGTAATGTGATCAGGCACCGAATCTAATGACGTGGCCGACATTTTGTTTGGCCCTTGTTATCAAAATTAGGATTCAGATTGTAAGGCTTAAGATGAGGATTTTAAGAATTGGGGAACTTCTCCAGTTACTCTTATTGTTATCCTTGTTTAACAGATATTGGTGTTTTGGCTGAACTCCTTTCCCTTCTTCTTTTGGTGCCTAAAAAAGAGATTTTTCAAATCTGGTTTGTGGGGTTGTAAATAGAGGTGGCTTTTGGAATTTCAAATTGTGTCAACTGGGCAGGTATCTGAAGCTTCTGTTAGTCGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAACCGGGACGAGGGATGGTCTGCATTTAGGAACATTTTGGCAGAAATCAATGAAGCATCTAGGCTTTTCATGCTGCCCAGTCAGGTTTCTGCTGCTCATGGCTAGCTTCTCATCGTGCCATTCATGGGCTTACTTCCTTTGTTTCTCGTTTAACGTAATTTCGCGCTGTTTTCTTTTGCCTAAACCAGGAAAATTCTGAACATTCAGAACATCTTGTCGGACTTTCAGACGATGTCGGTGCAGGCTTCATATCAGGTCATAGTAGTCAACCTGCTCCAACCTCTGACTTGAATGTAGATAGACAAGTAGACTTGTCAGCTCAAGATGACATGGGCAATCTGGGTGTTTCAAAAGTTATCCGAGCTGATCAGAAAAGATTCTTTTTCGATCTCGGAAGTAACAACCGGGGTCATTTCTTGAGGATATCTGAGGTAATGATCTACAAAACTGAGCTCAACAGCCTGAATTTGATGTCTAGTTAATCTGTTTCTGTCTGTTTTGAACCCCATGGTTCGTTTCTTCGTTTTCTTGGTATGAAATTCATGAACCGATATCGGTTACAGGTTGCAGGGGCGGATCGTTCTTCGATCATTCTCCCATTGTCAGGTCTTAAACAGTTCTATGAAATAGTGGGACATTTTGTGGAGATCACCAAGGATAGGATTGAAGGAATGACAGGCGTGAACGTTAGGACCGTGGATCCGCCTCACAGGTAAAAGTATATACACGGCCCCCAGGGCTCGTGGTGAACTATTCGTTTTAGTGTTTGTGTAGATCTACACGCACGCATGTGTTCAAGTAGAGTTCAAATTATGGTCGGTGTGGTTCGGTATGTTCCTGTCTTGATTTTCTGGTTCAAGTCTGAATAATCCATCCTGCTAGATTAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGAATAACATAAGGTAGAGAGGGGAAAGAGATATGTTTGTAATTGACACTCTATAATAATGGTGAGTTCAGGTGTGTT ACACACTCGCAGTCGCGGGGAATTATTAGTAGAAATTGAGTCGGAGCTGGGGGTGGGAGATGGAGGGGAATTCCGGCGGAGGGGGAGCGGGAATTGGGGGAACGACTGCCGGCGGCGTGGCGGCAGGAGGAGTATCGGGCGGCGGTGGCGGCGGCGGAGGGAACGACGTGGAGCTGATGTGCAAAACGCTGCAGGTGGAACACAAGCTTTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATTTGAAGATATCAGAGAAAACATCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCCGATGATCCAGAGGTTTTTAGCAAGGAATTGCAGCTCGACACAAAGGTGTTTTATTTCGACATCGGCGAGAATCGGAGGGGTCGTTTCTTGAAGGTATCTGAAGCTTCTGTTAGTCGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAACCGGGACGAGGGATGGTCTGCATTTAGGAACATTTTGGCAGAAATCAATGAAGCATCTAGGCTTTTCATGCTGCCCAGTCAGGAAAATTCTGAACATTCAGAACATCTTGTCGGACTTTCAGACGATGTCGGTGCAGGCTTCATATCAGGTCATAGTAGTCAACCTGCTCCAACCTCTGACTTGAATGTAGATAGACAAGTAGACTTGTCAGCTCAAGATGACATGGGCAATCTGGGTGTTTCAAAAGTTATCCGAGCTGATCAGAAAAGATTCTTTTTCGATCTCGGAAGTAACAACCGGGGTCATTTCTTGAGGATATCTGAGGTTGCAGGGGCGGATCGTTCTTCGATCATTCTCCCATTGTCAGGTCTTAAACAGTTCTATGAAATAGTGGGACATTTTGTGGAGATCACCAAGGATAGGATTGAAGGAATGACAGGCGTGAACGTTAGGACCGTGGATCCGCCTCACAGGTAAAAGTATATACACGGCCCCCAGGGCTCGTGGTGAACTATTCGTTTTAGTGTTTGTGTAGATCTACACGCACGCATGTGTTCAAGTAGAGTTCAAATTATGGTCGGTGTGGTTCGGTATGTTCCTGTCTTGATTTTCTGGTTCAAGTCTGAATAATCCATCCTGCTAGATTAGCAGAGGCTATGGAAAATGCTTGAGAAGCTTAATTCTTCTTCTTCCATGAATAACATAAGGTAGAGAGGGGAAAGAGATATGTTTGTAATTGACACTCTATAATAATGGTGAGTTCAGGTGTGTT ATGGAGGGGAATTCCGGCGGAGGGGGAGCGGGAATTGGGGGAACGACTGCCGGCGGCGTGGCGGCAGGAGGAGTATCGGGCGGCGGTGGCGGCGGCGGAGGGAACGACGTGGAGCTGATGTGCAAAACGCTGCAGGTGGAACACAAGCTTTTCTACTTCGATCTGAAGGAGAATCCCAGAGGCCGATATTTGAAGATATCAGAGAAAACATCGGCTACAAGGTCAACGATCATTGTTCCCTTCTCTGGGATTCCATGGTTCTTAGATCTCTTCAATTACTATATCAATTCCGATGATCCAGAGGTTTTTAGCAAGGAATTGCAGCTCGACACAAAGGTGTTTTATTTCGACATCGGCGAGAATCGGAGGGGTCGTTTCTTGAAGGTATCTGAAGCTTCTGTTAGTCGAAACCGCAGCACCATTATCGTTCCTGCTGGAAGCAACCGGGACGAGGGATGGTCTGCATTTAGGAACATTTTGGCAGAAATCAATGAAGCATCTAGGCTTTTCATGCTGCCCAGTCAGGAAAATTCTGAACATTCAGAACATCTTGTCGGACTTTCAGACGATGTCGGTGCAGGCTTCATATCAGGTCATAGTAGTCAACCTGCTCCAACCTCTGACTTGAATGTAGATAGACAAGTAGACTTGTCAGCTCAAGATGACATGGGCAATCTGGGTGTTTCAAAAGTTATCCGAGCTGATCAGAAAAGATTCTTTTTCGATCTCGGAAGTAACAACCGGGGTCATTTCTTGAGGATATCTGAGGTTGCAGGGGCGGATCGTTCTTCGATCATTCTCCCATTGTCAGGTCTTAAACAGTTCTATGAAATAGTGGGACATTTTGTGGAGATCACCAAGGATAGGATTGAAGGAATGACAGGCGTGAACGTTAGGACCGTGGATCCGCCTCACAGGTAA MEGNSGGGGAGIGGTTAGGVAAGGVSGGGGGGGGNDVELMCKTLQVEHKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGIPWFLDLFNYYINSDDPEVFSKELQLDTKVFYFDIGENRRGRFLKVSEASVSRNRSTIIVPAGSNRDEGWSAFRNILAEINEASRLFMLPSQENSEHSEHLVGLSDDVGAGFISGHSSQPAPTSDLNVDRQVDLSAQDDMGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEVAGADRSSIILPLSGLKQFYEIVGHFVEITKDRIEGMTGVNVRTVDPPHR
BLAST of Carg12923 vs. NCBI nr
Match: XP_022960667.1 (transcription factor Pur-alpha 1-like [Cucurbita moschata] >XP_023516300.1 transcription factor Pur-alpha 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 548.5 bits (1412), Expect = 1.4e-152 Identity = 305/306 (99.67%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of Carg12923 vs. NCBI nr
Match: XP_022987265.1 (transcription factor Pur-alpha 1-like [Cucurbita maxima]) HSP 1 Score: 542.0 bits (1395), Expect = 1.3e-150 Identity = 268/271 (98.89%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Carg12923 vs. NCBI nr
Match: XP_023531642.1 (transcription factor Pur-alpha 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 536.2 bits (1380), Expect = 7.3e-149 Identity = 265/271 (97.79%), Postives = 269/271 (99.26%), Query Frame = 0
BLAST of Carg12923 vs. NCBI nr
Match: XP_022929520.1 (transcription factor Pur-alpha 1-like [Cucurbita moschata]) HSP 1 Score: 533.9 bits (1374), Expect = 3.6e-148 Identity = 264/270 (97.78%), Postives = 268/270 (99.26%), Query Frame = 0
BLAST of Carg12923 vs. NCBI nr
Match: XP_022967890.1 (transcription factor Pur-alpha 1-like [Cucurbita maxima]) HSP 1 Score: 533.9 bits (1374), Expect = 3.6e-148 Identity = 264/270 (97.78%), Postives = 268/270 (99.26%), Query Frame = 0
BLAST of Carg12923 vs. TAIR10
Match: AT2G32080.1 (purin-rich alpha 1) HSP 1 Score: 437.6 bits (1124), Expect = 6.4e-123 Identity = 219/272 (80.51%), Postives = 244/272 (89.71%), Query Frame = 0
BLAST of Carg12923 vs. Swiss-Prot
Match: sp|Q9SKZ1|PUR_ARATH (Transcription factor Pur-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PURA1 PE=1 SV=2) HSP 1 Score: 437.6 bits (1124), Expect = 1.2e-121 Identity = 219/272 (80.51%), Postives = 244/272 (89.71%), Query Frame = 0
BLAST of Carg12923 vs. Swiss-Prot
Match: sp|Q6PHK6|PURB_DANRE (Transcriptional activator protein Pur-beta OS=Danio rerio OX=7955 GN=purb PE=2 SV=3) HSP 1 Score: 90.1 bits (222), Expect = 4.5e-17 Identity = 79/275 (28.73%), Postives = 116/275 (42.18%), Query Frame = 0
BLAST of Carg12923 vs. Swiss-Prot
Match: sp|Q6PAC9|PURBA_XENLA (Transcriptional activator protein Pur-beta-A OS=Xenopus laevis OX=8355 GN=purb-a PE=2 SV=3) HSP 1 Score: 87.4 bits (215), Expect = 2.9e-16 Identity = 75/265 (28.30%), Postives = 115/265 (43.40%), Query Frame = 0
BLAST of Carg12923 vs. Swiss-Prot
Match: sp|Q8AVS4|PURBB_XENLA (Transcriptional activator protein Pur-beta-B OS=Xenopus laevis OX=8355 GN=purb-b PE=2 SV=3) HSP 1 Score: 86.3 bits (212), Expect = 6.6e-16 Identity = 75/265 (28.30%), Postives = 113/265 (42.64%), Query Frame = 0
BLAST of Carg12923 vs. Swiss-Prot
Match: sp|Q00577|PURA_HUMAN (Transcriptional activator protein Pur-alpha OS=Homo sapiens OX=9606 GN=PURA PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14 Identity = 68/250 (27.20%), Postives = 106/250 (42.40%), Query Frame = 0
BLAST of Carg12923 vs. TrEMBL
Match: tr|A0A0A0LZP1|A0A0A0LZP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598870 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 4.5e-147 Identity = 263/271 (97.05%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of Carg12923 vs. TrEMBL
Match: tr|A0A1S3BPW8|A0A1S3BPW8_CUCME (transcription factor Pur-alpha 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492403 PE=4 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.0e-146 Identity = 262/271 (96.68%), Postives = 266/271 (98.15%), Query Frame = 0
BLAST of Carg12923 vs. TrEMBL
Match: tr|A0A1S4DZ49|A0A1S4DZ49_CUCME (transcription factor Pur-alpha 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492403 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 1.3e-141 Identity = 262/304 (86.18%), Postives = 266/304 (87.50%), Query Frame = 0
BLAST of Carg12923 vs. TrEMBL
Match: tr|A0A0B2QL97|A0A0B2QL97_GLYSO (Transcription factor Pur-alpha 1 OS=Glycine soja OX=3848 GN=glysoja_029525 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 5.6e-137 Identity = 243/271 (89.67%), Postives = 260/271 (95.94%), Query Frame = 0
BLAST of Carg12923 vs. TrEMBL
Match: tr|A0A061GR22|A0A061GR22_THECC (Transcription factor Pur-alpha 1 OS=Theobroma cacao OX=3641 GN=TCM_039973 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 7.3e-137 Identity = 245/271 (90.41%), Postives = 259/271 (95.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |