CmoCh08G009340 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G009340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ferredoxin-related
Location	Cmo_Chr08 : 6080116 .. 6082272 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTGCTCAATTTTGACTCCCCATCGCACCCTTTTTTCCCAACTAGGGTTTTCTTTTCTTCCCCACTGCCACATTTCTTTCCCCTTCCACTGTAAAGCAAACCCCCTTTTTCTTCCTTTTCTTTGTACAGTTATTGTTTGTGGCAATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGTATGATTATTGCTTGATTTTCCTTTTTCTTGCCTGAATCTGACAATGTGATGGGTTTTGATTTGTTTGAGGTTGTGATTCATCTGTTTTGTGAATGGTGGTGTGTTTTGTTGTTTGTATTCAAGCTTGTTGAGAGTGGTCGTAGGGTTGGGCAGTTGCCCGTGAGATTAGTCTAGGTACGTGCAACCGGAGGCGTAATGTTTGAATTATTTGGTCTTTGTTTGGCAAATTCAGGTTGTTGCTTCCTAATGAATAACATAGTTGTGTGTGTTGGTGGATGAAAGCGGCACGTGGACTAATTTAGGGAATGATCGTGGGTTATAATCGAGGAATACTATCTCTATTGGTATGAGGTCTTTTGGGAAGCTCAAAGCAAAGCCATGAGAGCTTATGCTTAAAGTAGACCATATCATATCACTGTGGAGAGTCGTGTTCATCTAACATTGTGATTATAGTTTTCATTTCTTGAAGGAATTGATGTGACATCCTATATCGATTGAAGGAATTGATGCTCAAACGGTTGGAGAGGACGTTGAGCCCTGAAGGGGGGTGGACACCAAGTGGTGTGTCAGCGAGGACGCTGGACCTCGAAGGAGAGTGGATTGTGAGATCCCACATCGATTGGACAGAGGAATAAGTGAGAGGATGTTGAGCCCTGAAGGAGGGTGGACACCAAGTGGCGTGTCAGCGAGGACGCTGGACCTCGAATGAGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAATAAGTGAGAGGACGTTGAGCCCCGAAGGAGGGTGGACACCAAGTGGCGTGTCAGCGAGGACGCAGGACCTCGAAGGAGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAATAACTGCTAGCGAGAAAGCCTTCTAGCAGACGTGTTTTAAAACCTAGGAGGGAAGCCCATGAGAGAAAATTCTACTAGCAGTGGGCTTAAGCTTCAATGAGTAGGAGGGTGGAGCGGGGCATGATGCCGATGCCCTTTCGAGATAATGATTTTTTTTTGGAAGCTTTGTTTTGGCATTATGGGATGGGAGTTGGAGTTGGAGTGTGAGATCCCACATCGATTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGGCACCTCTTTCTTTTTTAGTAGACGACGATAATACGTAATGTATGAACTTGGGCTGTTACAGAAACATTTCCATTTCATTCTTCTTTTGGCTGGATGGATTTTATAGGTTATTCAGTTTGTTCTTCACTCTACAGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCAGTCACATTGTAGCTTGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTTTGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCACGGTGATGTAAAAAGTAGGGATTGATGACTGAAAATTTTGTTTCATATTGAAATATAAGAGTCAAGAGCCGAT

mRNA sequence

TTCTTGCTCAATTTTGACTCCCCATCGCACCCTTTTTTCCCAACTAGGGTTTTCTTTTCTTCCCCACTGCCACATTTCTTTCCCCTTCCACTGTAAAGCAAACCCCCTTTTTCTTCCTTTTCTTTGTACAGTTATTGTTTGTGGCAATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCAGTCACATTGTAGCTTGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTTTGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCACGGTGATGTAAAAAGTAGGGATTGATGACTGAAAATTTTGTTTCATATTGAAATATAAGAGTCAAGAGCCGAT

Coding sequence (CDS)

ATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCAGTCACATTGTAGCTTGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTTTGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCACGGTGATGTAA

Homology

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BLAST of CmoCh08G009340 vs. TrEMBL
Match: A0A0A0KD29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.4e-102
Identity = 179/211 (84.83%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           MM+KLC   CF  CS L AVLVSSK+HGNPANDLVDIINRNRTAAK+S LSDSAGLGC+A
Sbjct: 1   MMRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQF NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTIT  IVACQ EYLEPTE
Sbjct: 61  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+ DKKTLSL+ NKSHTEVGVG+VGVHKGPF WCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIVM 213
           KQKRGCFSG SVECSR HS+ AFWNN + ++
Sbjct: 181 KQKRGCFSGGSVECSRGHSDRAFWNNFSFIL 211

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BLAST of CmoCh08G009340 vs. TrEMBL
Match: W9QRH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.7e-82
Identity = 146/210 (69.52%), Postives = 173/210 (82.38%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           M K+LC   C  FC +LLA LV SK HGNPANDLV++IN NRTA KL++L+DS GLGC+A
Sbjct: 1   MWKQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQF  FCKGNCTS+NTVNC PS D+FTE+FAP+CGVELPTF TIT  IV C+ +YLEP+ 
Sbjct: 61  LQFVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSL 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L+PDK+TLS+L NKSH+EVGVGMVGVHKGPF WCVLFSSG+TNSTFVLENHGLGI
Sbjct: 121 AFSNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIV 212
           KQK+GC+SGSS+ CS  H +    +N  ++
Sbjct: 181 KQKKGCYSGSSIPCSVGHKSAVSPSNFLLL 210

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BLAST of CmoCh08G009340 vs. TrEMBL
Match: A0A067K1I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-77
Identity = 138/227 (60.79%), Postives = 172/227 (75.77%), Query Frame = 1


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           M +KKLC       C +LLA  VSSK HGNPAND+V++IN NRTA KL +L++S GLGC+
Sbjct: 2   MPLKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCM 61

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPT 120
           ALQ+   C+GNCTSNN VNC P  D+FTEVFAP+CGVELPTF TIT HIV C+ +Y++P+
Sbjct: 62  ALQYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPS 121

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           + FS  L+ D +TLSLL NKSHTEVGVG VG HKGPF WC+LFS+GKTNSTFVLE+HG G
Sbjct: 122 QVFSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKG 181

Query: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNV-AIVMIFFIISSKICSISF 227
           IKQ++GC+SGS+  CS  H    F NN+ AIV ++  +S  +  + F
Sbjct: 182 IKQRKGCYSGSTFPCSSGHKMSLFLNNIMAIVFLYLCVSLHLHEVRF 228

[Close]

BLAST of CmoCh08G009340 vs. TrEMBL
Match: M5X0T7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010954mg PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.6e-77
Identity = 146/218 (66.97%), Postives = 167/218 (76.61%), Query Frame = 1


Query: 1   MMMKKLCLLNCFG-FCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
           M+ K+LC    F  FC +LLA LV SK HGNPANDLV+IIN NRTA KLS+L+DS GLGC
Sbjct: 1   MVKKRLCCCGWFIIFCHLLLAALVFSKNHGNPANDLVEIINNNRTAHKLSKLNDSPGLGC 60

Query: 61  IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEP 120
           IALQ+A  CKGNC+ NNTV C PS D+FTEVFAPDCGVELPTF TIT HIV CQ +YLEP
Sbjct: 61  IALQYAELCKGNCSINNTVKCKPSEDDFTEVFAPDCGVELPTFGTITGHIVGCQSKYLEP 120

Query: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
           + AF   L+ D K LS+L NKSHTEVGVGMV VHKGPF W VLFSSGKTNSTFVLEN G 
Sbjct: 121 SLAFVHVLVRDSKALSILRNKSHTEVGVGMVRVHKGPFFWSVLFSSGKTNSTFVLENRGA 180

Query: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFII 218
           GI+QK+GC+SGSS+ CS    N +   N  ++M F  +
Sbjct: 181 GIQQKKGCYSGSSIPCSAGQQNASLVLNNVMIMGFLCV 218

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BLAST of CmoCh08G009340 vs. TrEMBL
Match: D7SM37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00880 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-76
Identity = 139/213 (65.26%), Postives = 168/213 (78.87%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           M+KKL     F   ++LL  +V SK HGNPANDLVDIIN+NRTA KL +L+D+ GLGC+A
Sbjct: 1   MLKKLWCWGWFTVSNLLLVTVVYSKQHGNPANDLVDIINKNRTAQKLPKLNDNPGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQ+   CKGNC+ NNT+NC PS D+FTE+FAP+CGVELPTF TI+ HIV CQ +Y+E +E
Sbjct: 61  LQYVEECKGNCSKNNTINCRPSEDDFTEIFAPNCGVELPTFGTISGHIVGCQSKYIESSE 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFS+ LI DKK LSLL NK+HTEVGVGM+G HKGPFLWCVLFSSG+TN+TFVLE+ G GI
Sbjct: 121 AFSQVLIRDKKALSLLRNKTHTEVGVGMIGNHKGPFLWCVLFSSGQTNTTFVLEDRGEGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIF 215
           KQK+GCFSGSS  CS    N  F NN+ +  I+
Sbjct: 181 KQKKGCFSGSSTPCSGGQKNSIFGNNLTMGFIY 213

[Close]

BLAST of CmoCh08G009340 vs. TAIR10
Match: AT1G02180.1 (AT1G02180.1 ferredoxin-related)

HSP 1 Score: 228.0 bits (580), Expect = 5.8e-60
Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           M  ++ +L        L +VL SSK HGN A+++V I+N+NRTA KL +L++S GLGC+A
Sbjct: 1   MKNEISILELILLFLSLSSVLASSKLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQ+   C+GNC  NNT++C    D+FT+VFAP+CGVELPTF TIT HI+ C  +Y  P  
Sbjct: 61  LQYVELCEGNCNVNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEV 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L  D   LS+L N+SHTEVGVGM  +HKG F WC+LFS G  NS+FVLE++G GI
Sbjct: 121 AFSDILFRDSSALSVLRNRSHTEVGVGMARLHKGTFFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 182 KQKRGCFSGSSVECS 197
           KQ+ GC+SGS+  CS
Sbjct: 181 KQRTGCYSGSAFPCS 195

[Close]

BLAST of CmoCh08G009340 vs. NCBI nr
Match: gi|659120163|ref|XP_008460047.1| (PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 184/211 (87.20%), Postives = 195/211 (92.42%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           MM+KLC+  CF  CS L AVLVSSK+HGNPANDLVDIINRNRTAAKLS LSDSAGLGC+A
Sbjct: 1   MMRKLCIFECFILCSFLFAVLVSSKFHGNPANDLVDIINRNRTAAKLSHLSDSAGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQF NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTIT  IVACQ EYLEPTE
Sbjct: 61  LQFINFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQLEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+PDKKTLSLL NKSHTEVGVG+VGVHKGPF WCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVPDKKTLSLLKNKSHTEVGVGLVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIVM 213
           KQKRGCFSGSSVECSR HS+GAFWNN + ++
Sbjct: 181 KQKRGCFSGSSVECSRGHSDGAFWNNFSFIL 211

[Close]

BLAST of CmoCh08G009340 vs. NCBI nr
Match: gi|449470664|ref|XP_004153036.1| (PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 3.4e-102
Identity = 179/211 (84.83%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           MM+KLC   CF  CS L AVLVSSK+HGNPANDLVDIINRNRTAAK+S LSDSAGLGC+A
Sbjct: 1   MMRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQF NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTIT  IVACQ EYLEPTE
Sbjct: 61  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+ DKKTLSL+ NKSHTEVGVG+VGVHKGPF WCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIVM 213
           KQKRGCFSG SVECSR HS+ AFWNN + ++
Sbjct: 181 KQKRGCFSGGSVECSRGHSDRAFWNNFSFIL 211

[Close]

BLAST of CmoCh08G009340 vs. NCBI nr
Match: gi|703074287|ref|XP_010089779.1| (hypothetical protein L484_008029 [Morus notabilis])

HSP 1 Score: 313.2 bits (801), Expect = 3.9e-82
Identity = 146/210 (69.52%), Postives = 173/210 (82.38%), Query Frame = 1


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           M K+LC   C  FC +LLA LV SK HGNPANDLV++IN NRTA KL++L+DS GLGC+A
Sbjct: 1   MWKQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPTE 121
           LQF  FCKGNCTS+NTVNC PS D+FTE+FAP+CGVELPTF TIT  IV C+ +YLEP+ 
Sbjct: 61  LQFVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSL 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L+PDK+TLS+L NKSH+EVGVGMVGVHKGPF WCVLFSSG+TNSTFVLENHGLGI
Sbjct: 121 AFSNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRAHSNGAFWNNVAIV 212
           KQK+GC+SGSS+ CS  H +    +N  ++
Sbjct: 181 KQKKGCYSGSSIPCSVGHKSAVSPSNFLLL 210

[Close]

BLAST of CmoCh08G009340 vs. NCBI nr
Match: gi|645252840|ref|XP_008232305.1| (PREDICTED: uncharacterized protein LOC103331461 [Prunus mume])

HSP 1 Score: 297.0 bits (759), Expect = 2.9e-77
Identity = 147/218 (67.43%), Postives = 168/218 (77.06%), Query Frame = 1


Query: 1   MMMKKLCLLNCFGFCS-VLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGC 60
           M+ K+LC    F F S +LLA LV SK HGNPANDLV+IIN NRTA KLS+L+DS GLGC
Sbjct: 1   MVKKRLCCCGWFIFVSHLLLAALVCSKNHGNPANDLVEIINNNRTAHKLSKLNDSPGLGC 60

Query: 61  IALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEP 120
           IALQ+A  CKGNC+ NNTVNC PS D+FTEVFAPDCGVELPTF TIT HIV CQ +YLEP
Sbjct: 61  IALQYAELCKGNCSINNTVNCKPSEDDFTEVFAPDCGVELPTFSTITGHIVGCQSKYLEP 120

Query: 121 TEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGL 180
           + AF   L+ D K LS+L NKSHTEVGVGMV VHKGPF W VLFSSGKTNSTFVLEN G 
Sbjct: 121 SLAFGHVLVRDSKALSILRNKSHTEVGVGMVRVHKGPFFWSVLFSSGKTNSTFVLENRGA 180

Query: 181 GIKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFII 218
           GI+QK+GC+SGSS+ CS    N +   N  ++M F  +
Sbjct: 181 GIQQKKGCYSGSSIPCSAGQQNASLVLNNVMIMGFLCV 218

[Close]

BLAST of CmoCh08G009340 vs. NCBI nr
Match: gi|802700554|ref|XP_012083755.1| (PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas])

HSP 1 Score: 296.6 bits (758), Expect = 3.8e-77
Identity = 138/227 (60.79%), Postives = 172/227 (75.77%), Query Frame = 1


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           M +KKLC       C +LLA  VSSK HGNPAND+V++IN NRTA KL +L++S GLGC+
Sbjct: 2   MPLKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCM 61

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPT 120
           ALQ+   C+GNCTSNN VNC P  D+FTEVFAP+CGVELPTF TIT HIV C+ +Y++P+
Sbjct: 62  ALQYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPS 121

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           + FS  L+ D +TLSLL NKSHTEVGVG VG HKGPF WC+LFS+GKTNSTFVLE+HG G
Sbjct: 122 QVFSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKG 181

Query: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNV-AIVMIFFIISSKICSISF 227
           IKQ++GC+SGS+  CS  H    F NN+ AIV ++  +S  +  + F
Sbjct: 182 IKQRKGCYSGSTFPCSSGHKMSLFLNNIMAIVFLYLCVSLHLHEVRF 228

The following BLAST results are available for this feature:

BLAST of CmoCh08G009340 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G009340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD29_CUCSA	2.4e-102	84.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1	[more]
W9QRH9_9ROSA	2.7e-82	69.52	Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1	[more]
A0A067K1I4_JATCU	2.6e-77	60.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1	[more]
M5X0T7_PRUPE	7.6e-77	66.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010954mg PE=4 SV=1	[more]
D7SM37_VITVI	1.0e-76	65.26	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00880 PE=4 SV=...	[more]

BLAST of CmoCh08G009340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02180.1	5.8e-60	54.87	ferredoxin-related	[more]

BLAST of CmoCh08G009340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120163\|ref\|XP_008460047.1\|	2.5e-105	87.20	PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo]	[more]
gi\|449470664\|ref\|XP_004153036.1\|	3.4e-102	84.83	PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus]	[more]
gi\|703074287\|ref\|XP_010089779.1\|	3.9e-82	69.52	hypothetical protein L484_008029 [Morus notabilis]	[more]
gi\|645252840\|ref\|XP_008232305.1\|	2.9e-77	67.43	PREDICTED: uncharacterized protein LOC103331461 [Prunus mume]	[more]
gi\|802700554\|ref\|XP_012083755.1\|	3.8e-77	60.79	PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G009340.1	CmoCh08G009340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34537	FAMILY NOT NAMED	coord: 2..225 score: 7.8E
None	No IPR available	PANTHER	PTHR34537:SF2	FERREDOXIN-LIKE PROTEIN	coord: 2..225 score: 7.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G009340	Cucsa.362260	Cucumber (Gy14) v1	cgycmoB1008
CmoCh08G009340	CmaCh17G000660	Cucurbita maxima (Rimu)	cmacmoB381
CmoCh08G009340	CmaCh08G009630	Cucurbita maxima (Rimu)	cmacmoB912
CmoCh08G009340	Csa6G080400	Cucumber (Chinese Long) v2	cmocuB892
CmoCh08G009340	MELO3C022454	Melon (DHL92) v3.5.1	cmomeB802
CmoCh08G009340	ClCG06G000870	Watermelon (Charleston Gray)	cmowcgB801
CmoCh08G009340	CSPI06G06340	Wild cucumber (PI 183967)	cmocpiB905
CmoCh08G009340	Cp4.1LG12g00550	Cucurbita pepo (Zucchini)	cmocpeB844
CmoCh08G009340	Cp4.1LG17g02710	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G009340	MELO3C022454.2	Melon (DHL92) v3.6.1	cmomedB905
CmoCh08G009340	CsaV3_6G006730	Cucumber (Chinese Long) v3	cmocucB1057
CmoCh08G009340	Cla97C06G110140	Watermelon (97103) v2	cmowmbB898
CmoCh08G009340	Bhi12G002226	Wax gourd	cmowgoB1087
CmoCh08G009340	CsGy6G006360	Cucumber (Gy14) v2	cgybcmoB856
CmoCh08G009340	Carg11079	Silver-seed gourd	carcmoB1452
CmoCh08G009340	Carg10172	Silver-seed gourd	carcmoB0324

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G009340	CmoCh17G000690	Cucurbita moschata (Rifu)	cmocmoB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G009340	Watermelon (97103) v2	cmowmbB892
CmoCh08G009340	Cucurbita moschata (Rifu)	cmocmoB235
CmoCh08G009340	Cucurbita moschata (Rifu)	cmocmoB297
CmoCh08G009340	Cucurbita moschata (Rifu)	cmocmoB314
CmoCh08G009340	Cucurbita maxima (Rimu)	cmacmoB281
CmoCh08G009340	Cucurbita maxima (Rimu)	cmacmoB365
CmoCh08G009340	Wild cucumber (PI 183967)	cmocpiB893
CmoCh08G009340	Cucumber (Chinese Long) v2	cmocuB880
CmoCh08G009340	Melon (DHL92) v3.5.1	cmomeB835
CmoCh08G009340	Watermelon (Charleston Gray)	cmowcgB796
CmoCh08G009340	Watermelon (97103) v1	cmowmB859
CmoCh08G009340	Watermelon (97103) v1	cmowmB862
CmoCh08G009340	Cucurbita pepo (Zucchini)	cmocpeB833
CmoCh08G009340	Cucumber (Gy14) v2	cgybcmoB846
CmoCh08G009340	Melon (DHL92) v3.6.1	cmomedB944
CmoCh08G009340	Silver-seed gourd	carcmoB0326
CmoCh08G009340	Cucumber (Chinese Long) v3	cmocucB1041
CmoCh08G009340	Cucumber (Chinese Long) v3	cmocucB1047