CmaCh17G000660 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ferredoxin-related
Location	Cma_Chr17 : 303974 .. 305537 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCATGAGTGTGCCCACTCCAAAATCCCCTTTTCTCATCCAAATCCCATTCTTTAAGAACCAAAACGGCTAAATGGGGCCATCCCTTTCTTGTCCTGTCTCACAATCTCTGCAACAATTTGATCAATTTTTCCCGGAAAATCTCCCACTCCCCGTTAAACCCTTTCCCCAATTAGGGTTTCTTTTTCTTTCCCACTTCCATTTCTCTTTCTTCTTCTCCTTTTGGCCTTTTGATCTTCTTTCGTTCTTTGTACAATCATTGTTTGTGGTATAATGAGGAACCTCTGTATCGTTGAATGTTTCCTTCTCTGTTCTTCCCTGTTCGCTGTTCTTGTTGCCTCCAAGCATCACGGTAAGTTTCTCTGATCTTCGACTTTCCTTTTCCATGGCTGAATCTGCATTGCCAACTGTTATGGGTTTTAATTTGGTTGAATTTATGCTACTTCTGTCTTGAGATTGATGGTTTTAGTATTGAAGAAATGTTTGTTTTCCCCACTAGTCTTGTAGATTTTGACTAACCAGTCCATCGAGACCCATGAATTTAGCTAGTGCCAGGTCTCGTTGAGGAGGGTAGAGAGGAGGAAAGGGTTTACTCGATGCGAGATATCACATTGTTCAAGGGACCCTAGATTCTATCGGAGCAAAGGATCGCCAATAAAGGCATTCTAGTGGGTTGTAGATGCTATGTGAATCGCTAGAAATATGTAGTGATCGATGAAGTATGGGATGAGAGTTGAGAATTTAACTTGAAGTAAGAAGATAGCTTGATTTGATATTGATGTTCATTGATTTTGATAATGGGTAGCGAAAAAGTTCATACCATCAAAGAATACAGGGAATAATGTTGTTGCATCATCCTTAGCAGCACCAAATGTGATGACTTCATGTGAACATTTTTCATTTCATTCTGTTTTGGTTGGATGTGTTTATAGGTTAGTTTCTTCTTCATTCTACAGGAAACCCAGCAAATGATCTTGTTGATATCATCAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCTTGAGTGACAGTGCAGGTCTCGGGTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAATAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATTGCGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGTCAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAGAAAACTCTTTCCCTGTTGAGGAACGAATCTCACACAGAGGTTGGGGTGGGGATGGTTGGGGTATATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGACAAACTCATCATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCATTTACTCTGTTCTTTCTTATAATTTATTGTAAGATTTGTTCTTCTTTTTCATATATAGATCAATAG

mRNA sequence

ACCCATGAGTGTGCCCACTCCAAAATCCCCTTTTCTCATCCAAATCCCATTCTTTAAGAACCAAAACGGCTAAATGGGGCCATCCCTTTCTTGTCCTGTCTCACAATCTCTGCAACAATTTGATCAATTTTTCCCGGAAAATCTCCCACTCCCCGTTAAACCCTTTCCCCAATTAGGGTTTCTTTTTCTTTCCCACTTCCATTTCTCTTTCTTCTTCTCCTTTTGGCCTTTTGATCTTCTTTCGTTCTTTGTACAATCATTGTTTGTGGTATAATGAGGAACCTCTGTATCGTTGAATGTTTCCTTCTCTGTTCTTCCCTGTTCGCTGTTCTTGTTGCCTCCAAGCATCACGGAAACCCAGCAAATGATCTTGTTGATATCATCAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCTTGAGTGACAGTGCAGGTCTCGGGTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAATAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATTGCGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGTCAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAGAAAACTCTTTCCCTGTTGAGGAACGAATCTCACACAGAGGTTGGGGTGGGGATGGTTGGGGTATATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGACAAACTCATCATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGATCAATAG

Coding sequence (CDS)

ATGAGGAACCTCTGTATCGTTGAATGTTTCCTTCTCTGTTCTTCCCTGTTCGCTGTTCTTGTTGCCTCCAAGCATCACGGAAACCCAGCAAATGATCTTGTTGATATCATCAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCTTGAGTGACAGTGCAGGTCTCGGGTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAATAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATTGCGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGTCAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAGAAAACTCTTTCCCTGTTGAGGAACGAATCTCACACAGAGGTTGGGGTGGGGATGGTTGGGGTATATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGACAAACTCATCATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGATCAATAG

Protein sequence

MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMALQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIKQKRGCFSGSSVECSRDQ

Homology

[Close]

BLAST of CmaCh17G000660 vs. TrEMBL
Match: A0A0A0KD29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-97
Identity = 171/195 (87.69%), Postives = 184/195 (94.36%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           MR LC  ECF+LCS L AVLV+SK HGNPANDLVDIIN+NRTAAK+S LSDSAGLGCMAL
Sbjct: 2   MRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMAL 61

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           QF+NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTITGQIVACQ  YLEPTEA
Sbjct: 62  QFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTEA 121

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FSRALV DKKTLSL++N+SHTEVGVG+VGV+KGPFFWCVLFS+GKTNS+FVLENHGLGIK
Sbjct: 122 FSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIK 181

Query: 181 QKRGCFSGSSVECSR 196
           QKRGCFSG SVECSR
Sbjct: 182 QKRGCFSGGSVECSR 196

[Close]

BLAST of CmaCh17G000660 vs. TrEMBL
Match: W9QRH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 3.4e-81
Identity = 141/193 (73.06%), Postives = 166/193 (86.01%), Query Frame = 1


Query: 2   RNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMALQ 61
           + LC   C L C  L A LV SK HGNPANDLV++IN NRTA KL++L+DS GLGCMALQ
Sbjct: 3   KQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMALQ 62

Query: 62  FINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEAF 121
           F+ FCKGNCTS+NTVNC PS D+FTE+FAP+CGVELPTF TITG+IV C+  YLEP+ AF
Sbjct: 63  FVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSLAF 122

Query: 122 SRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIKQ 181
           S  LVPDK+TLS+L N+SH+EVGVGMVGV+KGPFFWCVLFS+G+TNS+FVLENHGLGIKQ
Sbjct: 123 SNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGIKQ 182

Query: 182 KRGCFSGSSVECS 195
           K+GC+SGSS+ CS
Sbjct: 183 KKGCYSGSSIPCS 195

[Close]

BLAST of CmaCh17G000660 vs. TrEMBL
Match: A0A061E2R5_THECC (Ferredoxin-related OS=Theobroma cacao GN=TCM_005795 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.2e-75
Identity = 134/197 (68.02%), Postives = 159/197 (80.71%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           M+ LC  E  LLC  L A  V SKHHGNPANDLV+IIN+NRTA KL +L+DS GLGCMAL
Sbjct: 3   MKKLCFCEWILLCHLLLATAVCSKHHGNPANDLVEIINQNRTAQKLPQLNDSPGLGCMAL 62

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           Q++  CKGNC+ N+ VNC P  D+FTEVFAP+CGVELPTF TITG IV CQ  Y EP+ A
Sbjct: 63  QYVELCKGNCSGNSAVNCKPPDDDFTEVFAPNCGVELPTFGTITGHIVGCQSKYTEPSLA 122

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FS  LV DKK+LSLL+N+S+TEVGVG+VG +KGPFFWC+LFSNG+TNS+FVLE+ G GIK
Sbjct: 123 FSHVLVKDKKSLSLLKNKSNTEVGVGLVGFHKGPFFWCILFSNGRTNSTFVLEDRGQGIK 182

Query: 181 QKRGCFSGSSVECSRDQ 198
           QK+GC+SGSS  C+  Q
Sbjct: 183 QKKGCYSGSSFPCNAGQ 199

[Close]

BLAST of CmaCh17G000660 vs. TrEMBL
Match: A0A067K1I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.0e-75
Identity = 128/194 (65.98%), Postives = 160/194 (82.47%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           ++ LC  E  +LC  L A  V+SK+HGNPAND+V++IN+NRTA KL +L++S GLGCMAL
Sbjct: 4   LKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCMAL 63

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           Q++  C+GNCTSNN VNC P  D+FTEVFAP+CGVELPTF TITG IV C+  Y++P++ 
Sbjct: 64  QYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPSQV 123

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FS  LV D +TLSLLRN+SHTEVGVG VG +KGPFFWC+LFSNGKTNS+FVLE+HG GIK
Sbjct: 124 FSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKGIK 183

Query: 181 QKRGCFSGSSVECS 195
           Q++GC+SGS+  CS
Sbjct: 184 QRKGCYSGSTFPCS 197

[Close]

BLAST of CmaCh17G000660 vs. TrEMBL
Match: A0A0B2PSF3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_035953 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.4e-74
Identity = 134/194 (69.07%), Postives = 158/194 (81.44%), Query Frame = 1


Query: 5   CIVECFLLCSSLFAVLVASKH-HGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMALQFI 64
           C++  FL C  L   LV S H HGNPA+++VDIINKN T  KL RL+DS GLGCMALQ++
Sbjct: 10  CVLLHFLCCCLLLPALVLSHHIHGNPASNIVDIINKNLTDQKLPRLNDSPGLGCMALQYV 69

Query: 65  NFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEAFSR 124
             CKGNCT NN VNC P  D+FTEVFAP+CGVELPTF TITG IV CQ  YLEP+ AFS 
Sbjct: 70  ELCKGNCTDNNVVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCQRKYLEPSLAFSE 129

Query: 125 ALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIKQKR 184
            L+ D+K+LSLL+N+SHTEVGVG+VG++KGPFFWCVLFSNGKTNS+FVLENHG GI+QK+
Sbjct: 130 VLIKDEKSLSLLKNKSHTEVGVGLVGLHKGPFFWCVLFSNGKTNSTFVLENHGAGIQQKK 189

Query: 185 GCFSGSSVECSRDQ 198
           GC+SGS+  CSR Q
Sbjct: 190 GCYSGSTTPCSRGQ 203

[Close]

BLAST of CmaCh17G000660 vs. TAIR10
Match: AT1G02180.1 (AT1G02180.1 ferredoxin-related)

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-63
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 1


Query: 1   MRN-LCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMA 60
           M+N + I+E  LL  SL +VL +SK HGN A+++V I+N+NRTA KL +L++S GLGCMA
Sbjct: 1   MKNEISILELILLFLSLSSVLASSKLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMA 60

Query: 61  LQFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTE 120
           LQ++  C+GNC  NNT++C    D+FT+VFAP+CGVELPTF TITG I+ C   Y  P  
Sbjct: 61  LQYVELCEGNCNVNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEV 120

Query: 121 AFSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGI 180
           AFS  L  D   LS+LRN SHTEVGVGM  ++KG FFWC+LFS+G  NSSFVLE++G GI
Sbjct: 121 AFSDILFRDSSALSVLRNRSHTEVGVGMARLHKGTFFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 181 KQKRGCFSGSSVECS 195
           KQ+ GC+SGS+  CS
Sbjct: 181 KQRTGCYSGSAFPCS 195

[Close]

BLAST of CmaCh17G000660 vs. NCBI nr
Match: gi|659120163|ref|XP_008460047.1| (PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo])

HSP 1 Score: 374.8 bits (961), Expect = 9.4e-101
Identity = 178/195 (91.28%), Postives = 188/195 (96.41%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           MR LCI ECF+LCS LFAVLV+SK HGNPANDLVDIIN+NRTAAKLS LSDSAGLGCMAL
Sbjct: 2   MRKLCIFECFILCSFLFAVLVSSKFHGNPANDLVDIINRNRTAAKLSHLSDSAGLGCMAL 61

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           QFINFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTITGQIVACQ  YLEPTEA
Sbjct: 62  QFINFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQLEYLEPTEA 121

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FSRALVPDKKTLSLL+N+SHTEVGVG+VGV+KGPFFWCVLFS+GKTNS+FVLENHGLGIK
Sbjct: 122 FSRALVPDKKTLSLLKNKSHTEVGVGLVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIK 181

Query: 181 QKRGCFSGSSVECSR 196
           QKRGCFSGSSVECSR
Sbjct: 182 QKRGCFSGSSVECSR 196

[Close]

BLAST of CmaCh17G000660 vs. NCBI nr
Match: gi|449470664|ref|XP_004153036.1| (PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-97
Identity = 171/195 (87.69%), Postives = 184/195 (94.36%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           MR LC  ECF+LCS L AVLV+SK HGNPANDLVDIIN+NRTAAK+S LSDSAGLGCMAL
Sbjct: 2   MRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMAL 61

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           QF+NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTFDTITGQIVACQ  YLEPTEA
Sbjct: 62  QFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTEA 121

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FSRALV DKKTLSL++N+SHTEVGVG+VGV+KGPFFWCVLFS+GKTNS+FVLENHGLGIK
Sbjct: 122 FSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIK 181

Query: 181 QKRGCFSGSSVECSR 196
           QKRGCFSG SVECSR
Sbjct: 182 QKRGCFSGGSVECSR 196

[Close]

BLAST of CmaCh17G000660 vs. NCBI nr
Match: gi|703074287|ref|XP_010089779.1| (hypothetical protein L484_008029 [Morus notabilis])

HSP 1 Score: 309.3 bits (791), Expect = 4.8e-81
Identity = 141/193 (73.06%), Postives = 166/193 (86.01%), Query Frame = 1


Query: 2   RNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMALQ 61
           + LC   C L C  L A LV SK HGNPANDLV++IN NRTA KL++L+DS GLGCMALQ
Sbjct: 3   KQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMALQ 62

Query: 62  FINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEAF 121
           F+ FCKGNCTS+NTVNC PS D+FTE+FAP+CGVELPTF TITG+IV C+  YLEP+ AF
Sbjct: 63  FVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSLAF 122

Query: 122 SRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIKQ 181
           S  LVPDK+TLS+L N+SH+EVGVGMVGV+KGPFFWCVLFS+G+TNS+FVLENHGLGIKQ
Sbjct: 123 SNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGIKQ 182

Query: 182 KRGCFSGSSVECS 195
           K+GC+SGSS+ CS
Sbjct: 183 KKGCYSGSSIPCS 195

[Close]

BLAST of CmaCh17G000660 vs. NCBI nr
Match: gi|590724244|ref|XP_007052411.1| (Ferredoxin-related [Theobroma cacao])

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-75
Identity = 134/197 (68.02%), Postives = 159/197 (80.71%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           M+ LC  E  LLC  L A  V SKHHGNPANDLV+IIN+NRTA KL +L+DS GLGCMAL
Sbjct: 3   MKKLCFCEWILLCHLLLATAVCSKHHGNPANDLVEIINQNRTAQKLPQLNDSPGLGCMAL 62

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           Q++  CKGNC+ N+ VNC P  D+FTEVFAP+CGVELPTF TITG IV CQ  Y EP+ A
Sbjct: 63  QYVELCKGNCSGNSAVNCKPPDDDFTEVFAPNCGVELPTFGTITGHIVGCQSKYTEPSLA 122

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FS  LV DKK+LSLL+N+S+TEVGVG+VG +KGPFFWC+LFSNG+TNS+FVLE+ G GIK
Sbjct: 123 FSHVLVKDKKSLSLLKNKSNTEVGVGLVGFHKGPFFWCILFSNGRTNSTFVLEDRGQGIK 182

Query: 181 QKRGCFSGSSVECSRDQ 198
           QK+GC+SGSS  C+  Q
Sbjct: 183 QKKGCYSGSSFPCNAGQ 199

[Close]

BLAST of CmaCh17G000660 vs. NCBI nr
Match: gi|802700554|ref|XP_012083755.1| (PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas])

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74
Identity = 128/194 (65.98%), Postives = 160/194 (82.47%), Query Frame = 1


Query: 1   MRNLCIVECFLLCSSLFAVLVASKHHGNPANDLVDIINKNRTAAKLSRLSDSAGLGCMAL 60
           ++ LC  E  +LC  L A  V+SK+HGNPAND+V++IN+NRTA KL +L++S GLGCMAL
Sbjct: 4   LKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCMAL 63

Query: 61  QFINFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVACQPGYLEPTEA 120
           Q++  C+GNCTSNN VNC P  D+FTEVFAP+CGVELPTF TITG IV C+  Y++P++ 
Sbjct: 64  QYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPSQV 123

Query: 121 FSRALVPDKKTLSLLRNESHTEVGVGMVGVYKGPFFWCVLFSNGKTNSSFVLENHGLGIK 180
           FS  LV D +TLSLLRN+SHTEVGVG VG +KGPFFWC+LFSNGKTNS+FVLE+HG GIK
Sbjct: 124 FSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKGIK 183

Query: 181 QKRGCFSGSSVECS 195
           Q++GC+SGS+  CS
Sbjct: 184 QRKGCYSGSTFPCS 197

The following BLAST results are available for this feature:

BLAST of CmaCh17G000660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G000660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD29_CUCSA	2.0e-97	87.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1	[more]
W9QRH9_9ROSA	3.4e-81	73.06	Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1	[more]
A0A061E2R5_THECC	1.2e-75	68.02	Ferredoxin-related OS=Theobroma cacao GN=TCM_005795 PE=4 SV=1	[more]
A0A067K1I4_JATCU	8.0e-75	65.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1	[more]
A0A0B2PSF3_GLYSO	1.4e-74	69.07	Uncharacterized protein OS=Glycine soja GN=glysoja_035953 PE=4 SV=1	[more]

BLAST of CmaCh17G000660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02180.1	2.8e-63	58.46	ferredoxin-related	[more]

BLAST of CmaCh17G000660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120163\|ref\|XP_008460047.1\|	9.4e-101	91.28	PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo]	[more]
gi\|449470664\|ref\|XP_004153036.1\|	2.8e-97	87.69	PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus]	[more]
gi\|703074287\|ref\|XP_010089779.1\|	4.8e-81	73.06	hypothetical protein L484_008029 [Morus notabilis]	[more]
gi\|590724244\|ref\|XP_007052411.1\|	1.8e-75	68.02	Ferredoxin-related [Theobroma cacao]	[more]
gi\|802700554\|ref\|XP_012083755.1\|	1.2e-74	65.98	PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000660.1	CmaCh17G000660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34537	FAMILY NOT NAMED	coord: 1..197 score: 3.2E
None	No IPR available	PANTHER	PTHR34537:SF2	FERREDOXIN-LIKE PROTEIN	coord: 1..197 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G000660	Cucsa.362260	Cucumber (Gy14) v1	cgycmaB0998
CmaCh17G000660	Csa6G080400	Cucumber (Chinese Long) v2	cmacuB369
CmaCh17G000660	MELO3C022454	Melon (DHL92) v3.5.1	cmameB316
CmaCh17G000660	ClCG06G000870	Watermelon (Charleston Gray)	cmawcgB323
CmaCh17G000660	CSPI06G06340	Wild cucumber (PI 183967)	cmacpiB373
CmaCh17G000660	CmoCh08G009340	Cucurbita moschata (Rifu)	cmacmoB381
CmaCh17G000660	CmoCh17G000690	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G000660	Lsi09G018570	Bottle gourd (USVL1VR-Ls)	cmalsiB334
CmaCh17G000660	Cp4.1LG12g00550	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G000660	Cp4.1LG17g02710	Cucurbita pepo (Zucchini)	cmacpeB382
CmaCh17G000660	MELO3C022454.2	Melon (DHL92) v3.6.1	cmamedB368
CmaCh17G000660	CsaV3_6G006730	Cucumber (Chinese Long) v3	cmacucB0441
CmaCh17G000660	Cla97C06G110140	Watermelon (97103) v2	cmawmbB370
CmaCh17G000660	Bhi12G002226	Wax gourd	cmawgoB0465
CmaCh17G000660	CsGy6G006360	Cucumber (Gy14) v2	cgybcmaB753
CmaCh17G000660	Carg11079	Silver-seed gourd	carcmaB1487
CmaCh17G000660	Carg10172	Silver-seed gourd	carcmaB0314

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G000660	CmaCh08G009630	Cucurbita maxima (Rimu)	cmacmaB388

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G000660	Silver-seed gourd	carcmaB0876
CmaCh17G000660	Silver-seed gourd	carcmaB1321
CmaCh17G000660	Cucumber (Chinese Long) v3	cmacucB0425
CmaCh17G000660	Watermelon (97103) v2	cmawmbB366
CmaCh17G000660	Wax gourd	cmawgoB0475
CmaCh17G000660	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh17G000660	Cucurbita maxima (Rimu)	cmacmaB373
CmaCh17G000660	Cucurbita maxima (Rimu)	cmacmaB370
CmaCh17G000660	Cucumber (Gy14) v1	cgycmaB0715
CmaCh17G000660	Cucurbita moschata (Rifu)	cmacmoB350
CmaCh17G000660	Cucurbita moschata (Rifu)	cmacmoB362
CmaCh17G000660	Cucurbita moschata (Rifu)	cmacmoB365
CmaCh17G000660	Wild cucumber (PI 183967)	cmacpiB361
CmaCh17G000660	Cucumber (Chinese Long) v2	cmacuB357
CmaCh17G000660	Melon (DHL92) v3.5.1	cmameB343
CmaCh17G000660	Watermelon (Charleston Gray)	cmawcgB319
CmaCh17G000660	Watermelon (97103) v1	cmawmB344
CmaCh17G000660	Watermelon (97103) v1	cmawmB353
CmaCh17G000660	Cucurbita pepo (Zucchini)	cmacpeB402
CmaCh17G000660	Cucurbita pepo (Zucchini)	cmacpeB411
CmaCh17G000660	Bottle gourd (USVL1VR-Ls)	cmalsiB356
CmaCh17G000660	Cucumber (Gy14) v2	cgybcmaB345
CmaCh17G000660	Melon (DHL92) v3.6.1	cmamedB398