ClCG06G000870 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G000870
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ferredoxin-like protein
Location	CG_Chr06 : 839370 .. 841265 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCCCAACTAGGGTTTCTTTTCCTTTCCCACTTCCATTTCTCTTCTTTCTTCCACTGTAAAGCAAACCCCTCTTTTTTCTTCTTCTCTTTTTTGCCTTTTTATCTTCTCTATTTCTTTTTACAGTCAGTCGTTGTTTGTGGTAATGATGATGAGGAAGCTCTGTATCTTCCAGTGCTTCATTGTCTATTCTTTCCTCTTTGCTGTTCTTGTTTCCTCCAAGTACCATGGTAAGTTTCTCTCTTGTTTAGTTCTTCCTTTTCCATTGTTGAACCTGCATTGTGGATTGTGATGTGTTAATTTGATTGAATTTATGCTTCTTCTGTCTTCTTATTGATGTTGTGTTTTGATATTAGTTTTCAGGGGTGTTGAAGAGGCTATTGTGAGAGCCCTATATATAATGATTATTAATTAGTAGGATATTAGTGAGGTACATTAAGGATAATTAACTAGTCGCATCCGGTTATAAATAAGAGGAGTTGGACACTTTAGGGTGGATCATTCTGGTAGGAATTCGAGAATTTAGGGAGAGAAATGGCACTCTCGAAAGGCTATTATATTTTCTTATAGTTTTATCTTGGTATTCTTTGTGTTTCAGTAAGTATCCTTGTTAGGTGGTATCCGACCGTTATCTTTGTAGCTTGTTTTGTGTTTGAACTTTGTGGTCTCCCATTTCTTCCTTCTGTTGCTTCCCATTCTATAGTCTGGTTAGGAAATTGCACAAACTGATCAAGATATATTGAAGTTGTTACAACTTGAAAGTTGTTGAGAGATGTTTGTTTTCTCCACTAGTCTTTTAAATTTTGATTCACTAGTCCAACTAGACCCATGAATATATATTGGACTCCTCTGCCAAATCAACTGCCCCAAAAAATGGATGACATTGAAGCGCACAACCTATACATCGTTGCCTCGATGAGTAGGAGGGTAGAGCATAGTATGATGCTGATGAACTAGGATGAAAGTTGGGAGATACTTTAATTTGAAGTAAGAAGATAGCTTGATTGTATACTGATGTACATAAATTTTGAATTGTGTATCATGAGTGACGTATCATTTTCCTTGATTTTTGCTAATGGGTATTGAAATAATTCTTTAGATAAAAGAATATAGAGAATAATGTTGTTGCTGTTGTTATAATCCTTAGCAGCACCAAATAAAAACATTTTCCATTTCATTTTCTTTTGGCTGAATGACTTAGTTTCTTCTTCATTCTACAGGAAACCCAGCAAATGATATTGTGGATATCATCAACAGAAACCGAACTGCTGCAAAGCTCTCTCACCTGAGTGACAGTGCAGGTCTTGGGTGCATGGCGTTGCAATTCGTGAACTTCTGCAAAGGAAACTGTACTAGTAACAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACTGAAATCTTCGCTCCAGATTGCGGTGTCGAGTTGCCAACTTTTGACACAATAACCGGCCAAATTGTGGCTTGTCAACCTGAATATTTCGAGCCTACCGAGGCCTTCTCTCGAGCGCTCATTCCTGACAAGAAAACTCTCTCACTGTTGAGGAACAAATCTCACACAGAAGTAGGGGTGGGGATGGTTGGGGTCCATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGCTGTTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCCTTAATCCTGTTCTTTTTTATTATCTCTTGCAAGATTTTTTCTTTTTCATTAATGGTGATGTGAAAGTAGAGATTGATGATTAAAATTTTTGTTCTATACTGAATTACAGGAAGAGTTAGAAGCCAATTTGAA

mRNA sequence

CTTTTCCCCAACTAGGGTTTCTTTTCCTTTCCCACTTCCATTTCTCTTCTTTCTTCCACTGTAAAGCAAACCCCTCTTTTTTCTTCTTCTCTTTTTTGCCTTTTTATCTTCTCTATTTCTTTTTACAGTCAGTCGTTGTTTGTGGTAATGATGATGAGGAAGCTCTGTATCTTCCAGTGCTTCATTGTCTATTCTTTCCTCTTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATATTGTGGATATCATCAACAGAAACCGAACTGCTGCAAAGCTCTCTCACCTGAGTGACAGTGCAGGTCTTGGGTGCATGGCGTTGCAATTCGTGAACTTCTGCAAAGGAAACTGTACTAGTAACAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACTGAAATCTTCGCTCCAGATTGCGGTGTCGAGTTGCCAACTTTTGACACAATAACCGGCCAAATTGTGGCTTGTCAACCTGAATATTTCGAGCCTACCGAGGCCTTCTCTCGAGCGCTCATTCCTGACAAGAAAACTCTCTCACTGTTGAGGAACAAATCTCACACAGAAGTAGGGGTGGGGATGGTTGGGGTCCATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGCTGTTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCCTTAATCCTGTTCTTTTTTATTATCTCTTGCAAGATTTTTTCTTTTTCATTAATGGTGATGTGAAAGTAGAGATTGATGATTAAAATTTTTGTTCTATACTGAATTACAGGAAGAGTTAGAAGCCAATTTGAA

Coding sequence (CDS)

ATGATGATGAGGAAGCTCTGTATCTTCCAGTGCTTCATTGTCTATTCTTTCCTCTTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATATTGTGGATATCATCAACAGAAACCGAACTGCTGCAAAGCTCTCTCACCTGAGTGACAGTGCAGGTCTTGGGTGCATGGCGTTGCAATTCGTGAACTTCTGCAAAGGAAACTGTACTAGTAACAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACTGAAATCTTCGCTCCAGATTGCGGTGTCGAGTTGCCAACTTTTGACACAATAACCGGCCAAATTGTGGCTTGTCAACCTGAATATTTCGAGCCTACCGAGGCCTTCTCTCGAGCGCTCATTCCTGACAAGAAAACTCTCTCACTGTTGAGGAACAAATCTCACACAGAAGTAGGGGTGGGGATGGTTGGGGTCCATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGCTGTTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCCTTAATCCTGTTCTTTTTTATTATCTCTTGCAAGATTTTTTCTTTTTCATTAATGGTGATGTGA

Protein sequence

MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNGAFWNNVSLILFFFIISCKIFSFSLMVM

Homology

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BLAST of ClCG06G000870 vs. TrEMBL
Match: A0A0A0KD29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 8.9e-110
Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           MMRKLC F+CF++ SFL AVLVSSK+HGNPAND+VDIINRNRTAAK+SHLSDSAGLGCMA
Sbjct: 1   MMRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQ EY EPTE
Sbjct: 61  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+ DKKTLSL++NKSHTEVGVG+VGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSLILF 214
           KQKRGCFSG SVECSRGHS+ AFWNN S IL+
Sbjct: 181 KQKRGCFSGGSVECSRGHSDRAFWNNFSFILY 212

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BLAST of ClCG06G000870 vs. TrEMBL
Match: W9QRH9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.9e-83
Identity = 148/212 (69.81%), Postives = 174/212 (82.08%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           M ++LC   C +    L A LV SK HGNPAND+V++IN NRTA KL+ L+DS GLGCMA
Sbjct: 1   MWKQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQFV FCKGNCTS+NTVNC PS D+FTEIFAP+CGVELPTF TITG+IV C+ +Y EP+ 
Sbjct: 61  LQFVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSL 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L+PDK+TLS+L NKSH+EVGVGMVGVHKGPFFWCVLFSSG+TNSTFVLENHGLGI
Sbjct: 121 AFSNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSLILF 214
           KQK+GC+SGSS+ CS GH +    +N  L+ F
Sbjct: 181 KQKKGCYSGSSIPCSVGHKSAVSPSNFLLLSF 212

[Close]

BLAST of ClCG06G000870 vs. TrEMBL
Match: A0A067K1I4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-80
Identity = 137/216 (63.43%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 1   MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCM 60
           M ++KLC  +  ++   L A  VSSK HGNPANDIV++IN NRTA KL  L++S GLGCM
Sbjct: 2   MPLKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCM 61

Query: 61  ALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPT 120
           ALQ+V  C+GNCTSNN VNC P  D+FTE+FAP+CGVELPTF TITG IV C+ +Y +P+
Sbjct: 62  ALQYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPS 121

Query: 121 EAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLG 180
           + FS  L+ D +TLSLLRNKSHTEVGVG VG HKGPFFWC+LFS+GKTNSTFVLE+HG G
Sbjct: 122 QVFSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKG 181

Query: 181 IKQKRGCFSGSSVECSRGHSNGAFWNNVSLILFFFI 217
           IKQ++GC+SGS+  CS GH    F NN+  I+F ++
Sbjct: 182 IKQRKGCYSGSTFPCSSGHKMSLFLNNIMAIVFLYL 217

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BLAST of ClCG06G000870 vs. TrEMBL
Match: D7SM37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00880 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.0e-78
Identity = 141/217 (64.98%), Postives = 172/217 (79.26%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           M++KL  +  F V + L   +V SK HGNPAND+VDIIN+NRTA KL  L+D+ GLGCMA
Sbjct: 1   MLKKLWCWGWFTVSNLLLVTVVYSKQHGNPANDLVDIINKNRTAQKLPKLNDNPGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQ+V  CKGNC+ NNT+NC PS D+FTEIFAP+CGVELPTF TI+G IV CQ +Y E +E
Sbjct: 61  LQYVEECKGNCSKNNTINCRPSEDDFTEIFAPNCGVELPTFGTISGHIVGCQSKYIESSE 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFS+ LI DKK LSLLRNK+HTEVGVGM+G HKGPF WCVLFSSG+TN+TFVLE+ G GI
Sbjct: 121 AFSQVLIRDKKALSLLRNKTHTEVGVGMIGNHKGPFLWCVLFSSGQTNTTFVLEDRGEGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSL-ILFFFII 218
           KQK+GCFSGSS  CS G  N  F NN+++  ++ F++
Sbjct: 181 KQKKGCFSGSSTPCSGGQKNSIFGNNLTMGFIYAFLL 217

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BLAST of ClCG06G000870 vs. TrEMBL
Match: M5X0T7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010954mg PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.8e-77
Identity = 146/229 (63.76%), Postives = 173/229 (75.55%), Query Frame = 1


Query: 1   MMMRKLCIFQCFIVYS-FLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGC 60
           M+ ++LC    FI++   L A LV SK HGNPAND+V+IIN NRTA KLS L+DS GLGC
Sbjct: 1   MVKKRLCCCGWFIIFCHLLLAALVFSKNHGNPANDLVEIINNNRTAHKLSKLNDSPGLGC 60

Query: 61  MALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEP 120
           +ALQ+   CKGNC+ NNTV C PS D+FTE+FAPDCGVELPTF TITG IV CQ +Y EP
Sbjct: 61  IALQYAELCKGNCSINNTVKCKPSEDDFTEVFAPDCGVELPTFGTITGHIVGCQSKYLEP 120

Query: 121 TEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGL 180
           + AF   L+ D K LS+LRNKSHTEVGVGMV VHKGPFFW VLFSSGKTNSTFVLEN G 
Sbjct: 121 SLAFVHVLVRDSKALSILRNKSHTEVGVGMVRVHKGPFFWSVLFSSGKTNSTFVLENRGA 180

Query: 181 GIKQKRGCFSGSSVECSRGHSNGAF-WNNVSLILFFFII-SCKIFSFSL 227
           GI+QK+GC+SGSS+ CS G  N +   NNV ++ F  ++   K F F+L
Sbjct: 181 GIQQKKGCYSGSSIPCSAGQQNASLVLNNVMIMGFLCVVYLLKQFHFNL 229

[Close]

BLAST of ClCG06G000870 vs. TAIR10
Match: AT1G02180.1 (AT1G02180.1 ferredoxin-related)

HSP 1 Score: 239.2 bits (609), Expect = 2.5e-63
Identity = 110/195 (56.41%), Postives = 142/195 (72.82%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           M  ++ I +  +++  L +VL SSK HGN A+++V I+N+NRTA KL  L++S GLGCMA
Sbjct: 1   MKNEISILELILLFLSLSSVLASSKLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQ+V  C+GNC  NNT++C    D+FT++FAP+CGVELPTF TITG I+ C  +Y  P  
Sbjct: 61  LQYVELCEGNCNVNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEV 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L  D   LS+LRN+SHTEVGVGM  +HKG FFWC+LFS G  NS+FVLE++G GI
Sbjct: 121 AFSDILFRDSSALSVLRNRSHTEVGVGMARLHKGTFFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 182 KQKRGCFSGSSVECS 197
           KQ+ GC+SGS+  CS
Sbjct: 181 KQRTGCYSGSAFPCS 195

[Close]

BLAST of ClCG06G000870 vs. NCBI nr
Match: gi|659120163|ref|XP_008460047.1| (PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 3.9e-114
Identity = 197/212 (92.92%), Postives = 207/212 (97.64%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           MMRKLCIF+CFI+ SFLFAVLVSSK+HGNPAND+VDIINRNRTAAKLSHLSDSAGLGCMA
Sbjct: 1   MMRKLCIFECFILCSFLFAVLVSSKFHGNPANDLVDIINRNRTAAKLSHLSDSAGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQF+NFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQ EY EPTE
Sbjct: 61  LQFINFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQLEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+PDKKTLSLL+NKSHTEVGVG+VGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVPDKKTLSLLKNKSHTEVGVGLVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSLILF 214
           KQKRGCFSGSSVECSRGHS+GAFWNN S IL+
Sbjct: 181 KQKRGCFSGSSVECSRGHSDGAFWNNFSFILY 212

[Close]

BLAST of ClCG06G000870 vs. NCBI nr
Match: gi|449470664|ref|XP_004153036.1| (PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           MMRKLC F+CF++ SFL AVLVSSK+HGNPAND+VDIINRNRTAAK+SHLSDSAGLGCMA
Sbjct: 1   MMRKLCAFECFMLCSFLSAVLVSSKFHGNPANDLVDIINRNRTAAKISHLSDSAGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQ EY EPTE
Sbjct: 61  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQHEYLEPTE 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFSRAL+ DKKTLSL++NKSHTEVGVG+VGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI
Sbjct: 121 AFSRALVSDKKTLSLMKNKSHTEVGVGIVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSLILF 214
           KQKRGCFSG SVECSRGHS+ AFWNN S IL+
Sbjct: 181 KQKRGCFSGGSVECSRGHSDRAFWNNFSFILY 212

[Close]

BLAST of ClCG06G000870 vs. NCBI nr
Match: gi|703074287|ref|XP_010089779.1| (hypothetical protein L484_008029 [Morus notabilis])

HSP 1 Score: 317.0 bits (811), Expect = 2.7e-83
Identity = 148/212 (69.81%), Postives = 174/212 (82.08%), Query Frame = 1


Query: 2   MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMA 61
           M ++LC   C +    L A LV SK HGNPAND+V++IN NRTA KL+ L+DS GLGCMA
Sbjct: 1   MWKQLCCCCCLLFCQLLLAALVCSKDHGNPANDLVNMINNNRTAHKLTKLNDSPGLGCMA 60

Query: 62  LQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPTE 121
           LQFV FCKGNCTS+NTVNC PS D+FTEIFAP+CGVELPTF TITG+IV C+ +Y EP+ 
Sbjct: 61  LQFVEFCKGNCTSDNTVNCKPSEDDFTEIFAPNCGVELPTFGTITGRIVGCRSKYLEPSL 120

Query: 122 AFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L+PDK+TLS+L NKSH+EVGVGMVGVHKGPFFWCVLFSSG+TNSTFVLENHGLGI
Sbjct: 121 AFSNVLVPDKRTLSVLSNKSHSEVGVGMVGVHKGPFFWCVLFSSGRTNSTFVLENHGLGI 180

Query: 182 KQKRGCFSGSSVECSRGHSNGAFWNNVSLILF 214
           KQK+GC+SGSS+ CS GH +    +N  L+ F
Sbjct: 181 KQKKGCYSGSSIPCSVGHKSAVSPSNFLLLSF 212

[Close]

BLAST of ClCG06G000870 vs. NCBI nr
Match: gi|802700554|ref|XP_012083755.1| (PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas])

HSP 1 Score: 305.4 bits (781), Expect = 8.1e-80
Identity = 137/216 (63.43%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 1   MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCM 60
           M ++KLC  +  ++   L A  VSSK HGNPANDIV++IN NRTA KL  L++S GLGCM
Sbjct: 2   MPLKKLCCCELIVLCHLLLAACVSSKNHGNPANDIVEMINENRTAHKLPQLNESPGLGCM 61

Query: 61  ALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPT 120
           ALQ+V  C+GNCTSNN VNC P  D+FTE+FAP+CGVELPTF TITG IV C+ +Y +P+
Sbjct: 62  ALQYVELCEGNCTSNNAVNCKPPEDDFTEVFAPNCGVELPTFGTITGHIVGCESKYVDPS 121

Query: 121 EAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLG 180
           + FS  L+ D +TLSLLRNKSHTEVGVG VG HKGPFFWC+LFS+GKTNSTFVLE+HG G
Sbjct: 122 QVFSHVLVKDNRTLSLLRNKSHTEVGVGFVGFHKGPFFWCILFSNGKTNSTFVLEDHGKG 181

Query: 181 IKQKRGCFSGSSVECSRGHSNGAFWNNVSLILFFFI 217
           IKQ++GC+SGS+  CS GH    F NN+  I+F ++
Sbjct: 182 IKQRKGCYSGSTFPCSSGHKMSLFLNNIMAIVFLYL 217

[Close]

BLAST of ClCG06G000870 vs. NCBI nr
Match: gi|731420573|ref|XP_010661428.1| (PREDICTED: uncharacterized protein LOC100263389 [Vitis vinifera])

HSP 1 Score: 301.2 bits (770), Expect = 1.5e-78
Identity = 142/218 (65.14%), Postives = 173/218 (79.36%), Query Frame = 1


Query: 1   MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCM 60
           MM++KL  +  F V + L   +V SK HGNPAND+VDIIN+NRTA KL  L+D+ GLGCM
Sbjct: 1   MMLKKLWCWGWFTVSNLLLVTVVYSKQHGNPANDLVDIINKNRTAQKLPKLNDNPGLGCM 60

Query: 61  ALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIVACQPEYFEPT 120
           ALQ+V  CKGNC+ NNT+NC PS D+FTEIFAP+CGVELPTF TI+G IV CQ +Y E +
Sbjct: 61  ALQYVEECKGNCSKNNTINCRPSEDDFTEIFAPNCGVELPTFGTISGHIVGCQSKYIESS 120

Query: 121 EAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLG 180
           EAFS+ LI DKK LSLLRNK+HTEVGVGM+G HKGPF WCVLFSSG+TN+TFVLE+ G G
Sbjct: 121 EAFSQVLIRDKKALSLLRNKTHTEVGVGMIGNHKGPFLWCVLFSSGQTNTTFVLEDRGEG 180

Query: 181 IKQKRGCFSGSSVECSRGHSNGAFWNNVSL-ILFFFII 218
           IKQK+GCFSGSS  CS G  N  F NN+++  ++ F++
Sbjct: 181 IKQKKGCFSGSSTPCSGGQKNSIFGNNLTMGFIYAFLL 218

The following BLAST results are available for this feature:

BLAST of ClCG06G000870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD29_CUCSA	8.9e-110	89.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080400 PE=4 SV=1	[more]
W9QRH9_9ROSA	1.9e-83	69.81	Uncharacterized protein OS=Morus notabilis GN=L484_008029 PE=4 SV=1	[more]
A0A067K1I4_JATCU	5.6e-80	63.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14674 PE=4 SV=1	[more]
D7SM37_VITVI	4.0e-78	64.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00880 PE=4 SV=...	[more]
M5X0T7_PRUPE	5.8e-77	63.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010954mg PE=4 SV=1	[more]

BLAST of ClCG06G000870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02180.1	2.5e-63	56.41	ferredoxin-related	[more]

BLAST of ClCG06G000870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120163\|ref\|XP_008460047.1\|	3.9e-114	92.92	PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo]	[more]
gi\|449470664\|ref\|XP_004153036.1\|	1.3e-109	89.62	PREDICTED: uncharacterized protein LOC101209494 [Cucumis sativus]	[more]
gi\|703074287\|ref\|XP_010089779.1\|	2.7e-83	69.81	hypothetical protein L484_008029 [Morus notabilis]	[more]
gi\|802700554\|ref\|XP_012083755.1\|	8.1e-80	63.43	PREDICTED: uncharacterized protein LOC105643262 [Jatropha curcas]	[more]
gi\|731420573\|ref\|XP_010661428.1\|	1.5e-78	65.14	PREDICTED: uncharacterized protein LOC100263389 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014044	CAP_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G000870.1	ClCG06G000870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 31..164 score: 2.0
None	No IPR available	PANTHER	PTHR34537	FAMILY NOT NAMED	coord: 2..225 score: 1.6E
None	No IPR available	PANTHER	PTHR34537:SF2	FERREDOXIN-LIKE PROTEIN	coord: 2..225 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G000870	Csa6G080400	Cucumber (Chinese Long) v2	cuwcgB476
ClCG06G000870	MELO3C022454	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G000870	Cla97C06G110140	Watermelon (97103) v2	wcgwmbB273
ClCG06G000870	Bhi12G002226	Wax gourd	wcgwgoB502
ClCG06G000870	CSPI06G06340	Wild cucumber (PI 183967)	cpiwcgB503
ClCG06G000870	Cucsa.362260	Cucumber (Gy14) v1	cgywcgB620
ClCG06G000870	CmaCh17G000660	Cucurbita maxima (Rimu)	cmawcgB323
ClCG06G000870	CmaCh08G009630	Cucurbita maxima (Rimu)	cmawcgB806
ClCG06G000870	CmoCh08G009340	Cucurbita moschata (Rifu)	cmowcgB801
ClCG06G000870	CmoCh17G000690	Cucurbita moschata (Rifu)	cmowcgB319
ClCG06G000870	Lsi09G018570	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G000870	Cp4.1LG17g02710	Cucurbita pepo (Zucchini)	cpewcgB295
ClCG06G000870	CsGy6G006360	Cucumber (Gy14) v2	cgybwcgB438
ClCG06G000870	MELO3C022454.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G000870	Carg11079	Silver-seed gourd	carwcgB1047
ClCG06G000870	Carg10172	Silver-seed gourd	carwcgB0223
ClCG06G000870	CsaV3_6G006730	Cucumber (Chinese Long) v3	cucwcgB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G000870	Watermelon (97103) v1	wcgwmB345
ClCG06G000870	Cucurbita pepo (Zucchini)	cpewcgB016
ClCG06G000870	Cucurbita pepo (Zucchini)	cpewcgB141