CmoCh08G004720 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G004720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionWRKY transcription factor 23
LocationCmo_Chr08 : 2911698 .. 2912749 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCCTCAATTCTCTCTCTAAAAGCCTTATTTCACGGGTAGGGTTTATGGAGCTTGATTTAATTTGGTCGCAATTTGATATGTTTTCGACGTCGTCTTACCCAATTCAAAATCCTGCTATCGACCCCGAGAATTTGGAGATATTGAATGCATGGCCTACATCGTCCACCCAGCTCATCAACGATGAATTGTCGGAGTTGAAGCTACAAGAAGAAGAGAAACCTCGACCAAAAACGGTTAAACCTAACCACTCGTTAGTGTTCCGTCTTTTTTTTTCTCTTTTTAATTCAACAATATTTAGAGGCAAATATCATTTGTTGATGTATTTAAAACATTAAATTTAGGTCGAAAACAAAGAAAACGAATCAGAAGAAGAAAGAGCAAGAACAACGATACACGTTCATGACGAAGAGCAAAGTTGATCATTTAGAAGATGGATATAGATGGAGAAAGTACGGGCAAAAAGCTGTAAAAAACAGCCCTTATCCTAGGTAATATCGTTGTACTCAAATTACTATTATACCCTAAATCTTATGGTGCACGGATGTTTCTAACATGTTTTTTTTTTCTTTTTGTAGGAGCTATTATCGTTGTACTAGTGTAGCATGTAATGTAAAGAAACGAGTGGAGAGATGCTTGAAAGATCCCAGCATTGTTATCACAACTTATGAAGGCCAACACCCTCACTCTACCCCTGTCATGGCTCGATCAACCTTCGTCCCTCCGCCTATCTCTACCTCTCTCCACGAGGGTTCCACATCGTTCACCTCCACCCCTCCTTATCTCTTTCACAACCAAAACGTTCATAATTTAAATTTTGCCCGCCACCCCAATGACTTTGTGGCACCGTCATTTCATCACGAGCGATTGCCACAACACACTGCCTCCTTCGATCCACCTACTCATTTATTTGCTTCTACTACTAATTATGAGTTACTTCAAGATGTTAGTTGGTCGACATGATGTATTGTAACAGCCCAAGTTCACTACTAACAGATATTATCTACTTTGACCCGTTATGTTTCGCCGTCAGCTTCACGATTTTAAAACGC

mRNA sequence

AACCCCTCAATTCTCTCTCTAAAAGCCTTATTTCACGGGTAGGGTTTATGGAGCTTGATTTAATTTGGTCGCAATTTGATATGTTTTCGACGTCGTCTTACCCAATTCAAAATCCTGCTATCGACCCCGAGAATTTGGAGATATTGAATGCATGGCCTACATCGTCCACCCAGCTCATCAACGATGAATTGTCGGAGTTGAAGCTACAAGAAGAAGAGAAACCTCGACCAAAAACGGTTAAACCTAACCACTCGTCGAAAACAAAGAAAACGAATCAGAAGAAGAAAGAGCAAGAACAACGATACACGTTCATGACGAAGAGCAAAGTTGATCATTTAGAAGATGGATATAGATGGAGAAAGTACGGGCAAAAAGCTGAGCTATTATCGTTGTACTAGTGTAGCATGTAATGTAAAGAAACGAGTGGAGAGATGCTTGAAAGATCCCAGCATTGTTATCACAACTTATGAAGGCCAACACCCTCACTCTACCCCTGTCATGGCTCGATCAACCTTCGTCCCTCCGCCTATCTCTACCTCTCTCCACGAGGGTTCCACATCGTTCACCTCCACCCCTCCTTATCTCTTTCACAACCAAAACGTTCATAATTTAAATTTTGCCCGCCACCCCAATGACTTTGTGGCACCGTCATTTCATCACGAGCGATTGCCACAACACACTGCCTCCTTCGATCCACCTACTCATTTATTTGCTTCTACTACTAATTATGAGTTACTTCAAGATGTTAGTTGGTCGACATGATGTATTGTAACAGCCCAAGTTCACTACTAACAGATATTATCTACTTTGACCCGTTATGTTTCGCCGTCAGCTTCACGATTTTAAAACGC

Coding sequence (CDS)

ATGGAGCTTGATTTAATTTGGTCGCAATTTGATATGTTTTCGACGTCGTCTTACCCAATTCAAAATCCTGCTATCGACCCCGAGAATTTGGAGATATTGAATGCATGGCCTACATCGTCCACCCAGCTCATCAACGATGAATTGTCGGAGTTGAAGCTACAAGAAGAAGAGAAACCTCGACCAAAAACGGTTAAACCTAACCACTCGTCGAAAACAAAGAAAACGAATCAGAAGAAGAAAGAGCAAGAACAACGATACACGTTCATGACGAAGAGCAAAGTTGATCATTTAGAAGATGGATATAGATGGAGAAAGTACGGGCAAAAAGCTGAGCTATTATCGTTGTACTAG
Homology
[Close]
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 16  SSYPIQNPAIDPENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKPNHSSKTK-K 75
           S + + NP   P +  I +A    S++ +N+E  + +  EEE    +  K +   + K K
Sbjct: 95  SDHLLINPPATPNSSSISSA----SSEALNEEKPKTEDNEEEGGEDQQEKSHTKKQLKAK 154

Query: 76  TNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
            N +K+++E R  FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 155 KNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKA 186

[Close]
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 71  KTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
           KTKKT + KK++E R +FMTKS+VDHLEDGYRWRKYGQKA   S Y
Sbjct: 146 KTKKT-EVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPY 190

[Close]
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQN-----------PAIDPENLEILNAWPTS---------STQLINDE 67
           S    FS  ++P+ N           P    E+ E++N  PTS         S +  ND 
Sbjct: 108 SNSSSFSFDAFPLPNNNNNTSFFTDLPLPQAESSEVVNTTPTSPNSTSVSSSSNEAANDN 167

Query: 68  LS----ELKLQEE--EKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGY 117
            S     +K QEE  ++   K  KP    K KK NQKK  +E R+ F+TKS +D+L+DGY
Sbjct: 168 NSGKEVTVKDQEEGDQQQEQKGTKPQ--LKAKKKNQKKA-REARFAFLTKSDIDNLDDGY 227

[Close]
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.0e-07
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 1 

Query: 13  FSTSSYPIQN--PAIDPENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKPNHS- 72
           FS  S P Q+  P+++   L +     TS++ +++   +E + +E    +   ++ N   
Sbjct: 42  FSPYSSPFQSVSPSVNNPYLNL-----TSNSPVVSSSSNEGEPKENTNDKSDQMEDNEGD 101

Query: 73  -----------SKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
                      +K  K   +KKE+E R  FMTKS++DHLEDGYRWRKYGQKA   S Y
Sbjct: 102 LHGVGESSKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPY 154

[Close]
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.9e-07
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1 

Query: 63  TVKPNHSSKTK-KTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
           + +P  SS+ K ++ +KKKE+E RY F T+S+VD L+DGYRWRKYGQKA
Sbjct: 29  SAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKA 77

[Close]
BLAST of CmoCh08G004720 vs. TrEMBL
Match: E7CEY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY52 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-17
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAI-DPENLEILNAWPTS----------STQLINDELS---ELKL 67
           SQFD+F TSS  + +  I +PENLEI N WPT+          S++++N EL+    L+ 
Sbjct: 39  SQFDVFETSSPSLSSSLISNPENLEIWNQWPTTPNYSSSISSTSSEIVNGELTTEPNLEG 98

Query: 68  QEEEKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
            E+++ +  TVK +   KTKK + KKK  E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 99  GEQKQDQQPTVKADKQLKTKKRSPKKKGAEPRFAFMTKSEVDHLEDGYRWRKYGQKA 155

[Close]
BLAST of CmoCh08G004720 vs. TrEMBL
Match: A0A0D5YAG9_SALMI (WRKY protein OS=Salvia miltiorrhiza GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-11
Identity = 52/113 (46.02%), Postives = 67/113 (59.29%), Query Frame = 1 

Query: 11  DMFSTSSYPIQNPAIDPE--NLEILNAWPTSSTQLINDELS-----------ELKLQEEE 70
           D F+     +++P+I P   + E+LNA  T +   I+ E S           E +  EEE
Sbjct: 46  DHFAAFEEEVEDPSIHPNWNSSEVLNAPQTPNCSSISSESSDGVKDERVNEEEDEEDEEE 105

Query: 71  KPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
               +  K +   K KKTNQKKK +EQR+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 106 DDNDQKKKTSKQLKVKKTNQKKK-REQRFAFMTKSEVDHLEDGYRWRKYGQKA 157

[Close]
BLAST of CmoCh08G004720 vs. TrEMBL
Match: G3FFC1_9ROSI (WRKY transcription factor 13-2 (Fragment) OS=Dimocarpus longan PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-11
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 1 

Query: 14  STSSYPIQNPAIDPENLEILN--------AWPTSSTQLINDELSELKLQEEEKPRPKTVK 73
           S+SS P        E+ E+LN        +  ++S++ +NDE  ++K++EEE+ + KT K
Sbjct: 70  SSSSSPNPTAVTKMESPELLNQPLTPNSSSISSASSEAVNDE--QIKVEEEEEDQQKTKK 129

Query: 74  PNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
                K KKTNQK+ ++E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 130 ---QLKPKKTNQKR-QREPRFAFMTKSEVDHLEDGYRWRKYGQKA 168

[Close]
BLAST of CmoCh08G004720 vs. TrEMBL
Match: A0A0A0L834_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168410 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-10
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAID-PENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKP 67
           S FD+ ST++ P+ +PA   PE+ E++NA  T ++  ++   +E    EE      T   
Sbjct: 71  SFFDLLSTAAPPLSSPASTVPESSEVVNAPTTPNSSSVSSSSNEAAAIEEVNNSTTTHDK 130

Query: 68  NHSSKTKKTNQK--KKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
             +SK  K  +K  KK++E R+ FMTKS +DHL+DGYRWRKYGQKA   S Y
Sbjct: 131 PSASKVLKPIKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPY 182

[Close]
BLAST of CmoCh08G004720 vs. TrEMBL
Match: A0A140H8K6_MANES (WRKY transcription factor 2 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-09
Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAIDP-----ENLEILN--AWPTSST------QLINDELSELKLQ 67
           S FD+    S  +Q  A +P     E+ E LN  A P SS+      + +NDEL ++   
Sbjct: 58  SMFDVLQVPSM-VQPAASNPVVTKVESPEALNQPATPNSSSISSASSEALNDELVKVADN 117

Query: 68  EEEKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
           EEE+ +    K     K KKTNQK+ ++E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 118 EEEEQQ----KTKKELKPKKTNQKR-QREPRFAFMTKSEVDHLEDGYRWRKYGQKA 167

[Close]
BLAST of CmoCh08G004720 vs. TAIR10
Match: AT2G47260.1 (AT2G47260.1 WRKY DNA-binding protein 23)

HSP 1 Score: 63.5 bits (153), Expect = 9.6e-11
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 16  SSYPIQNPAIDPENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKPNHSSKTK-K 75
           S + + NP   P +  I +A    S++ +N+E  + +  EEE    +  K +   + K K
Sbjct: 95  SDHLLINPPATPNSSSISSA----SSEALNEEKPKTEDNEEEGGEDQQEKSHTKKQLKAK 154

Query: 76  TNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
            N +K+++E R  FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 155 KNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKA 186

[Close]
BLAST of CmoCh08G004720 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 71  KTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
           KTKKT + KK++E R +FMTKS+VDHLEDGYRWRKYGQKA   S Y
Sbjct: 146 KTKKT-EVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPY 190

[Close]
BLAST of CmoCh08G004720 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQN-----------PAIDPENLEILNAWPTS---------STQLINDE 67
           S    FS  ++P+ N           P    E+ E++N  PTS         S +  ND 
Sbjct: 108 SNSSSFSFDAFPLPNNNNNTSFFTDLPLPQAESSEVVNTTPTSPNSTSVSSSSNEAANDN 167

Query: 68  LS----ELKLQEE--EKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGY 117
            S     +K QEE  ++   K  KP    K KK NQKK  +E R+ F+TKS +D+L+DGY
Sbjct: 168 NSGKEVTVKDQEEGDQQQEQKGTKPQ--LKAKKKNQKKA-REARFAFLTKSDIDNLDDGY 227

[Close]
BLAST of CmoCh08G004720 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 55.1 bits (131), Expect = 3.4e-08
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 1 

Query: 13  FSTSSYPIQN--PAIDPENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKPNHS- 72
           FS  S P Q+  P+++   L +     TS++ +++   +E + +E    +   ++ N   
Sbjct: 42  FSPYSSPFQSVSPSVNNPYLNL-----TSNSPVVSSSSNEGEPKENTNDKSDQMEDNEGD 101

Query: 73  -----------SKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
                      +K  K   +KKE+E R  FMTKS++DHLEDGYRWRKYGQKA   S Y
Sbjct: 102 LHGVGESSKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPY 154

[Close]
BLAST of CmoCh08G004720 vs. TAIR10
Match: AT3G01970.1 (AT3G01970.1 WRKY DNA-binding protein 45)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-08
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1 

Query: 63  TVKPNHSSKTK-KTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
           + +P  SS+ K ++ +KKKE+E RY F T+S+VD L+DGYRWRKYGQKA
Sbjct: 29  SAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKA 77

[Close]
BLAST of CmoCh08G004720 vs. NCBI nr
Match: gi|659101173|ref|XP_008451465.1| (PREDICTED: probable WRKY transcription factor 23 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 9.0e-19
Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAI-DPENLEILNAWPTS----------STQLINDELSELKLQ-- 67
           SQFD+F TSS  + +  I +PENLEI N WPT+          S++++N EL+E  L+  
Sbjct: 92  SQFDVFETSSPSLSSSLISNPENLEIWNQWPTTPNYSSSISSTSSEIVNGELTEPNLEGG 151

Query: 68  EEEKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
           EE++ R  TVK +   KTKK + KKK  E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 152 EEKQDRQPTVKTDKQLKTKKRSPKKKGVEPRFAFMTKSEVDHLEDGYRWRKYGQKA 207

[Close]
BLAST of CmoCh08G004720 vs. NCBI nr
Match: gi|525507288|ref|NP_001267684.1| (probable WRKY transcription factor 68-like [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 6.5e-17
Identity = 59/117 (50.43%), Postives = 78/117 (66.67%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAI-DPENLEILNAWPTS----------STQLINDELS---ELKL 67
           SQFD+F TSS  + +  I +PENLEI N WPT+          S++++N EL+    L+ 
Sbjct: 39  SQFDVFETSSPSLSSSLISNPENLEIWNQWPTTPNYSSSISSTSSEIVNGELTTEPNLEG 98

Query: 68  QEEEKPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
            E+++ +  TVK +   KTKK + KKK  E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 99  GEQKQDQQPTVKADKQLKTKKRSPKKKGAEPRFAFMTKSEVDHLEDGYRWRKYGQKA 155

[Close]
BLAST of CmoCh08G004720 vs. NCBI nr
Match: gi|659077791|ref|XP_008439387.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-11
Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 1 

Query: 8   SQFDMFSTSSYPIQNPAID-PENLEILNAWPTSSTQLINDELSELKLQEEEKPRPKTVKP 67
           S FD+ ST++ P+ +PA   PE+ E++NA  T ++  ++   +E    EE      T   
Sbjct: 71  SFFDLLSTAAPPLSSPASTVPESSEVVNAPTTPNSSSVSSSSNEAAAIEEVNNSTTTHDK 130

Query: 68  NHSSK---TKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKAELLSLY 117
             SSK   TKK NQKK ++E R+ FMTKS +DHL+DGYRWRKYGQKA   S Y
Sbjct: 131 PSSSKVVETKKKNQKK-QREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPY 182

[Close]
BLAST of CmoCh08G004720 vs. NCBI nr
Match: gi|787592992|gb|AKA27923.1| (WRKY protein [Salvia miltiorrhiza])

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-11
Identity = 52/113 (46.02%), Postives = 67/113 (59.29%), Query Frame = 1 

Query: 11  DMFSTSSYPIQNPAIDPE--NLEILNAWPTSSTQLINDELS-----------ELKLQEEE 70
           D F+     +++P+I P   + E+LNA  T +   I+ E S           E +  EEE
Sbjct: 46  DHFAAFEEEVEDPSIHPNWNSSEVLNAPQTPNCSSISSESSDGVKDERVNEEEDEEDEEE 105

Query: 71  KPRPKTVKPNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
               +  K +   K KKTNQKKK +EQR+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 106 DDNDQKKKTSKQLKVKKTNQKKK-REQRFAFMTKSEVDHLEDGYRWRKYGQKA 157

[Close]
BLAST of CmoCh08G004720 vs. NCBI nr
Match: gi|346456312|gb|AEO31518.1| (WRKY transcription factor 13-2 [Dimocarpus longan])

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-11
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 1 

Query: 14  STSSYPIQNPAIDPENLEILN--------AWPTSSTQLINDELSELKLQEEEKPRPKTVK 73
           S+SS P        E+ E+LN        +  ++S++ +NDE  ++K++EEE+ + KT K
Sbjct: 70  SSSSSPNPTAVTKMESPELLNQPLTPNSSSISSASSEAVNDE--QIKVEEEEEDQQKTKK 129

Query: 74  PNHSSKTKKTNQKKKEQEQRYTFMTKSKVDHLEDGYRWRKYGQKA 111
                K KKTNQK+ ++E R+ FMTKS+VDHLEDGYRWRKYGQKA
Sbjct: 130 ---QLKPKKTNQKR-QREPRFAFMTKSEVDHLEDGYRWRKYGQKA 168

The following BLAST results are available for this feature:
BLAST of CmoCh08G004720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK23_ARATH1.7e-0942.71Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=... [more]
WRK28_ARATH1.9e-0871.74Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=... [more]
WRK48_ARATH2.5e-0838.52Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=... [more]
WRK71_ARATH6.0e-0735.59Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=... [more]
WRK45_ARATH7.9e-0759.18Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=... [more]
BLAST of CmoCh08G004720 vs. TrEMBL
Match NameE-valueIdentityDescription
E7CEY6_CUCSA4.5e-1750.43Uncharacterized protein OS=Cucumis sativus GN=WRKY52 PE=2 SV=1[more]
A0A0D5YAG9_SALMI3.7e-1146.02WRKY protein OS=Salvia miltiorrhiza GN=WRKY57 PE=2 SV=1[more]
G3FFC1_9ROSI4.8e-1147.62WRKY transcription factor 13-2 (Fragment) OS=Dimocarpus longan PE=2 SV=1[more]
A0A0A0L834_CUCSA2.4e-1042.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168410 PE=4 SV=1[more]
A0A140H8K6_MANES2.0e-0946.55WRKY transcription factor 2 OS=Manihot esculenta PE=2 SV=1[more]
BLAST of CmoCh08G004720 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47260.19.6e-1142.71 WRKY DNA-binding protein 23[more]
AT4G18170.11.1e-0971.74 WRKY DNA-binding protein 28[more]
AT5G49520.11.4e-0938.52 WRKY DNA-binding protein 48[more]
AT1G29860.13.4e-0835.59 WRKY DNA-binding protein 71[more]
AT3G01970.14.5e-0859.18 WRKY DNA-binding protein 45[more]
BLAST of CmoCh08G004720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101173|ref|XP_008451465.1|9.0e-1953.45PREDICTED: probable WRKY transcription factor 23 [Cucumis melo][more]
gi|525507288|ref|NP_001267684.1|6.5e-1750.43probable WRKY transcription factor 68-like [Cucumis sativus][more]
gi|659077791|ref|XP_008439387.1|1.8e-1146.02PREDICTED: probable WRKY transcription factor 48 [Cucumis melo][more]
gi|787592992|gb|AKA27923.1|5.3e-1146.02WRKY protein [Salvia miltiorrhiza][more]
gi|346456312|gb|AEO31518.1|6.9e-1147.62WRKY transcription factor 13-2 [Dimocarpus longan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G004720.1CmoCh08G004720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 82..110
score: 7.
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 92..109
score:
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 89..110
score: 7.0
NoneNo IPR availablePANTHERPTHR31221FAMILY NOT NAMEDcoord: 1..110
score: 5.7
NoneNo IPR availablePANTHERPTHR31221:SF23WRKY TRANSCRIPTION FACTOR 23-RELATEDcoord: 1..110
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G004720CmaCh08G004800Cucurbita maxima (Rimu)cmacmoB913
CmoCh08G004720Lsi02G024900Bottle gourd (USVL1VR-Ls)cmolsiB809
CmoCh08G004720Cp4.1LG12g06240Cucurbita pepo (Zucchini)cmocpeB839
CmoCh08G004720MELO3C015910.2Melon (DHL92) v3.6.1cmomedB919
CmoCh08G004720CsaV3_7G030110Cucumber (Chinese Long) v3cmocucB1066
CmoCh08G004720Cla97C09G167380Watermelon (97103) v2cmowmbB916
CmoCh08G004720Bhi09G000660Wax gourdcmowgoB1126
CmoCh08G004720Bhi11G001082Wax gourdcmowgoB1081
CmoCh08G004720CsGy7G016720Cucumber (Gy14) v2cgybcmoB955
CmoCh08G004720Carg07110Silver-seed gourdcarcmoB0157
CmoCh08G004720Carg13392Silver-seed gourdcarcmoB0610
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G004720CmoCh17G009980Cucurbita moschata (Rifu)cmocmoB319
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G004720Wild cucumber (PI 183967)cmocpiB913
CmoCh08G004720Cucumber (Chinese Long) v2cmocuB900
CmoCh08G004720Melon (DHL92) v3.5.1cmomeB815
CmoCh08G004720Watermelon (Charleston Gray)cmowcgB785
CmoCh08G004720Watermelon (Charleston Gray)cmowcgB790
CmoCh08G004720Watermelon (97103) v1cmowmB849
CmoCh08G004720Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G004720Cucurbita pepo (Zucchini)cmocpeB861
CmoCh08G004720Bottle gourd (USVL1VR-Ls)cmolsiB817
CmoCh08G004720Silver-seed gourdcarcmoB1034
CmoCh08G004720Silver-seed gourdcarcmoB1107
CmoCh08G004720Watermelon (97103) v2cmowmbB881
CmoCh08G004720Cucurbita moschata (Rifu)cmocmoB229
CmoCh08G004720Cucurbita moschata (Rifu)cmocmoB378
CmoCh08G004720Watermelon (97103) v1cmowmB843
CmoCh08G004720Cucumber (Gy14) v1cgycmoB0610
CmoCh08G004720Cucurbita maxima (Rimu)cmacmoB276
CmoCh08G004720Cucurbita maxima (Rimu)cmacmoB374
CmoCh08G004720Cucurbita maxima (Rimu)cmacmoB490