CmoCh08G003580 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G003580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHeavy metal transport/detoxification superfamily protein
LocationCmo_Chr08 : 2223513 .. 2225221 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCAGCCACGCTCCCAGTGATCGAGTATGATAATAATGTTCTTCCTTTTTATTGTTAATTTATTTTTTTATTTTTTTATTTTATTTTGATGATATGGTTCATGTTTTTGTGTAGACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGGTAATGCCCATATAGCCTCACTCATTATTTTCAATTTCCATGATTTTTTTTGTTTCTTTTATGTTACTTCATTTGTATAAATATTTTTAAAATTAAGTAAATTAAAAAAGTATCTTTTCAATTTTGGAACATTCAGATCGTGAACAAAAAAAAGATAAAACATGTGGGATCTCACTTCGGTTGAGTAATAGAGAGGATTTGGGCCTTGAAGGGACGTGGATGGTTAGATCCCACATTGGTTGAGTGTGAGGGAAGACGTTGGCCCAGAAGGGGTGTAGATTGTGAGATCCCGCATCAGTTGAGTGCCAACAAGTACGCTGGCCCCAAAAGGGGTGTGGATTGTGAGATCCCACATCAGTTGAGTGTCAATGAGGACGTTGGCCCCAAAGGGGGTGGGGGGTGAGATTCCACATCGTTTGAGTGCCGGACAGGACAATGGACCCCAAAGGGTGGTGGAGTGTGAGATCCTACATCGGTTGAGTACCAACGAGTACGCTAGCCCAAAATGAGTGTAGATTGTGAGATCCCACATCGGTTGAGTGCTAGCGAGGACGTTGGGCCCCATAGGAGGGAGTGGATTACGAGATCCCACATCGATTGAGTGCCAACAAGAACATTGGCTCTAAAGGGGTGGAGTGTGAGATCCCACATCAATTGAATGTCAGCGAGGATAATGGGCTCAAACAGAGGTGAAGCCTAAGATTCCACGTAGGTCAGAGAGGATAATGACGTTTCAAAAAATTTTGAGGGAAAGGTCTAAAGAAAAAATCCAAAATTTTTTTTATTAAAAAGTGAAATTTATTGAAAGAAAAAGTAGATATAAACAAAATTATAAAAGATTGAGAAACAAAATTTGTTAAAACATTTATAATTTATTAATGTTTTTGTCTGTTTGTGTTTTGTTGTAATGGCGGCCAATGAAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG

mRNA sequence

ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG

Coding sequence (CDS)

ATGGAAACCAGCCACGCTCCCAGTGATCGAACTTATGTTCTCAGAGTGAATCTCAAGTGTTGCAACGCATGCCCCAACAGAGTCAAGAACAACCTTCTCAGACTTCCAGATGTCAAATCCGTAGCCATTGATATACAAAAAGGATTGGTAACTATCACTGCAAATTACACCTTTGATCCATTAACCATCGTACGTGCAATGTCAAGAACTGGTAAGCTAGCACGATTACAACCCATGGGATATGTGGCGCCGGCGCCGGTGGCCTCCGCCGCTTTCAGAGATTCCGTTCATCAGAATATTCCTTCTGCTGCTTCAGATCCTCACTGTAACAAAATTGATTGGACCCAGAACTGCGTTCCTGGCTCCAGCAAGGTTCATTTCAACGAGGCGGCCGGCGCCGTTCCGCCGGTGGATGTGCCGTACCGCCACCGGCTGTCACTTCGGCCGGGGTCGCAATTTGGAGGTGTGGGTCATGATGCAAGCCGTGGGTTTGGGCGTCCAATGATGGAGCCGTTGCCACAGCCTCTGCCGCCAGCCATGCCGCCCGCCATGCCACCAGGGAACGGATATTATCGATGGTCTGAGCCGCCGCCTTATTATTGGCAGCAGCAACCGCCCCCCGCTCCTGCGGTTGCTGCTGCACCGGGCCACTACTTGTTCAATGATGAGAATGTAGACGCGTGCAAGATCATTTAG
Homology
[Close]
BLAST of CmoCh08G003580 vs. TrEMBL
Match: A0A0A0K5U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G392360 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20
Identity = 80/234 (34.19%), Postives = 107/234 (45.73%), Query Frame = 1 

Query: 38  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVA-------------- 97
           V SV ++I+ GLV I+    FDP   ++ +++ GK A+   M   A              
Sbjct: 7   VTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTAAPSPIAQNPQFPTK 66

Query: 98  --------PAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGSS------KVHF 157
                   PAP A+++   S H   +  S  S+ HC K D   +    S       KVH 
Sbjct: 67  ENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHI 126

Query: 158 NEAAGAVPPVDVPYRHRLSLRPGS---------QFGG-VGHDASRGFGRPMMEPLPQPLP 217
           NEAA   PPV +P  +R+ +RP           Q+G  +G   S GF   M EP   P  
Sbjct: 127 NEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSH 186

Query: 218 PAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           P      PP + YYRW EP PYY Q+Q PP   V   P HY+FNDEN + C I+
Sbjct: 187 P------PPPHSYYRWPEPVPYYLQEQQPP---VGNTPNHYVFNDENTEGCIIV 231

[Close]
BLAST of CmoCh08G003580 vs. TrEMBL
Match: A0A022PZY8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv11b018162mg PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1 

Query: 7   PSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRA 66
           P + T VL ++L CC  CPN ++N LLR+P V SV+ID +KGLV +T     DP T++  
Sbjct: 44  PPNHTKVLSIDLTCCGKCPNILENILLRMPGVDSVSIDTEKGLVFVTGK--IDPTTLLDR 103

Query: 67  MSRTGKLARLQP 79
           +S  GK  RL P
Sbjct: 104 VSNLGKEVRLLP 113

[Close]
BLAST of CmoCh08G003580 vs. TrEMBL
Match: A0A067FRN7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043962mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1 

Query: 13  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGK 72
           VL+V L+CC ACP+++   LL++  V+ + ID ++GLV +T     DP  I++ + + G 
Sbjct: 3   VLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGV 62

Query: 73  LARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAG 132
            A L  + Y      A       +  N  S  +  +  +ID   +   G  +    +A  
Sbjct: 63  EAEL--LAYEKDPKKAKKKLDHFLKGN--SKDNKRNLEEIDDHDHDDRGGYEY---DARY 122

Query: 133 AVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRP-MMEPLPQPLPPAMPPAMPPGNGYY 192
           A+P     +      R              GF RP  + P+ QP+    PP  P    Y 
Sbjct: 123 AMPNCTSCHHPNYGTR----------RVLPGFPRPNYVHPINQPVIYNRPPPPP---RYV 182

Query: 193 RWSEPP-PYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           RW+ PP PY +    P    V  AP H+ F+DENV  C ++
Sbjct: 183 RWTRPPLPYPFSIYEPQGQDVGNAP-HHTFSDENVSVCSVM 200

[Close]
BLAST of CmoCh08G003580 vs. TAIR10
Match: AT4G23882.1 (AT4G23882.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08
Identity = 56/228 (24.56%), Postives = 95/228 (41.67%), Query Frame = 1 

Query: 6   APSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVR 65
           +P  RT VLRV +KCC  C  + K  LL +  V +V  + ++GL+T+T +   +P T++ 
Sbjct: 74  SPPVRTCVLRVGIKCCKGCQTKAKRKLLNVSGVSTVEYNAEQGLLTVTGD--ANPTTLLH 133

Query: 66  AMSRTGKLARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKV 125
            +++ GK A L             +   D+   ++P     P  N+    +      +K 
Sbjct: 134 KLTKWGKKAEL------------VSFLGDNYSSHVPRT---PEQNQNKTMEKKKKKPTKC 193

Query: 126 HFNEAAG-------AVPPVDVP-YRHRLSLRPGSQFGGVGHDASRGFGRPMMEPLPQPLP 185
                 G        + P+ +P +++R     G++ G      +     PM+ P PQ +P
Sbjct: 194 CLLMCFGNKRSKNTKIEPMAIPNWQYR---GVGNENGNARPFINAAMSPPMVYPPPQAVP 253

Query: 186 PAMPPAMPPGNGYYRWSEPPPY----YWQQQPPPAPAVAAAPG---HY 219
               P   P   ++    PPPY     +Q  PP +P     P    HY
Sbjct: 254 GFTTPIPYPPPSFFPGRPPPPYTGAGMFQSAPPQSPPYFPVPNPRLHY 281

[Close]
BLAST of CmoCh08G003580 vs. TAIR10
Match: AT3G05220.1 (AT3G05220.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 1 

Query: 10 RTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSR 69
          +T VL+VN+ C   C ++VK  L ++  V SV  D+++G VT+T N   DP  +V+ +S+
Sbjct: 10 QTCVLKVNVHC-EGCKHKVKKQLQKIEGVYSVKADVEQGRVTVTGN--IDPALLVKKLSK 69

Query: 70 TGKLARL 77
          +GK A +
Sbjct: 70 SGKHAEI 73

[Close]
BLAST of CmoCh08G003580 vs. NCBI nr
Match: gi|700189630|gb|KGN44863.1| (hypothetical protein Csa_7G392360 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-20
Identity = 80/234 (34.19%), Postives = 107/234 (45.73%), Query Frame = 1 

Query: 38  VKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYVA-------------- 97
           V SV ++I+ GLV I+    FDP   ++ +++ GK A+   M   A              
Sbjct: 7   VTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTAAPSPIAQNPQFPTK 66

Query: 98  --------PAPVASAAFRDSVH--QNIPSAASDPHCNKIDWTQNCVPGSS------KVHF 157
                   PAP A+++   S H   +  S  S+ HC K D   +    S       KVH 
Sbjct: 67  ENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSDGNSDAGNFSDHRSWPDKVHI 126

Query: 158 NEAAGAVPPVDVPYRHRLSLRPGS---------QFGG-VGHDASRGFGRPMMEPLPQPLP 217
           NEAA   PPV +P  +R+ +RP           Q+G  +G   S GF   M EP   P  
Sbjct: 127 NEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGSHGFWPGMSEPWSSPSH 186

Query: 218 PAMPPAMPPGNGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           P      PP + YYRW EP PYY Q+Q PP   V   P HY+FNDEN + C I+
Sbjct: 187 P------PPPHSYYRWPEPVPYYLQEQQPP---VGNTPNHYVFNDENTEGCIIV 231

[Close]
BLAST of CmoCh08G003580 vs. NCBI nr
Match: gi|604299977|gb|EYU19820.1| (hypothetical protein MIMGU_mgv11b018162mg [Erythranthe guttata])

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-08
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1 

Query: 7   PSDRTYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRA 66
           P + T VL ++L CC  CPN ++N LLR+P V SV+ID +KGLV +T     DP T++  
Sbjct: 44  PPNHTKVLSIDLTCCGKCPNILENILLRMPGVDSVSIDTEKGLVFVTGK--IDPTTLLDR 103

Query: 67  MSRTGKLARLQP 79
           +S  GK  RL P
Sbjct: 104 VSNLGKEVRLLP 113

[Close]
BLAST of CmoCh08G003580 vs. NCBI nr
Match: gi|641849946|gb|KDO68820.1| (hypothetical protein CISIN_1g043962mg, partial [Citrus sinensis])

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1 

Query: 13  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGK 72
           VL+V L+CC ACP+++   LL++  V+ + ID ++GLV +T     DP  I++ + + G 
Sbjct: 3   VLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGV 62

Query: 73  LARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAG 132
            A L  + Y      A       +  N  S  +  +  +ID   +   G  +    +A  
Sbjct: 63  EAEL--LAYEKDPKKAKKKLDHFLKGN--SKDNKRNLEEIDDHDHDDRGGYEY---DARY 122

Query: 133 AVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRP-MMEPLPQPLPPAMPPAMPPGNGYY 192
           A+P     +      R              GF RP  + P+ QP+    PP  P    Y 
Sbjct: 123 AMPNCTSCHHPNYGTR----------RVLPGFPRPNYVHPINQPVIYNRPPPPP---RYV 182

Query: 193 RWSEPP-PYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           RW+ PP PY +    P    V  AP H+ F+DENV  C ++
Sbjct: 183 RWTRPPLPYPFSIYEPQGQDVGNAP-HHTFSDENVSVCSVM 200

[Close]
BLAST of CmoCh08G003580 vs. NCBI nr
Match: gi|568852207|ref|XP_006479771.1| (PREDICTED: uncharacterized protein LOC102628147 [Citrus sinensis])

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1 

Query: 13  VLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGK 72
           VL+V L+CC ACP+++   LL++  V+ + ID ++GLV +T     DP  I++ + + G 
Sbjct: 12  VLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGV 71

Query: 73  LARLQPMGYVAPAPVASAAFRDSVHQNIPSAASDPHCNKIDWTQNCVPGSSKVHFNEAAG 132
            A L  + Y      A       +  N  S  +  +  +ID   +   G  +    +A  
Sbjct: 72  EAEL--LAYEKDPKKAKKKLDHFLKGN--SKDNKRNLEEIDDHDHDDRGGYEY---DARY 131

Query: 133 AVPPVDVPYRHRLSLRPGSQFGGVGHDASRGFGRP-MMEPLPQPLPPAMPPAMPPGNGYY 192
           A+P     +      R              GF RP  + P+ QP+    PP  P    Y 
Sbjct: 132 AMPNCTSCHHPNYGTR----------RVLPGFPRPNYVHPINQPVIYNRPPPPP---RYV 191

Query: 193 RWSEPP-PYYWQQQPPPAPAVAAAPGHYLFNDENVDACKII 232
           RW+ PP PY +    P    V  AP H+ F+DENV  C ++
Sbjct: 192 RWTRPPLPYPFSIYEPQGQDVGNAP-HHTFSDENVSVCSVM 209

[Close]
BLAST of CmoCh08G003580 vs. NCBI nr
Match: gi|1009147664|ref|XP_015891532.1| (PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Ziziphus jujuba])

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-06
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 1 

Query: 11 TYVLRVNLKCCNACPNRVKNNLLRLPDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRT 70
          T +L V+L+CC ACP RVK  L ++  V S+ ID++KG + +      DP TI+ A+S+ 
Sbjct: 10 TCILEVDLRCCKACPLRVKKKLQKITGVNSITIDVEKGTIAVAGE--VDPPTIINAISKL 69

Query: 71 GKLARL 77
          GK + L
Sbjct: 70 GKRSEL 73

The following BLAST results are available for this feature:
BLAST of CmoCh08G003580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh08G003580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5U2_CUCSA3.0e-2034.19Uncharacterized protein OS=Cucumis sativus GN=Csa_7G392360 PE=4 SV=1[more]
A0A022PZY8_ERYGU2.6e-0847.22Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv11b018162mg PE=4 SV=1[more]
A0A067FRN7_CITSI2.9e-0728.51Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043962mg PE=4 S... [more]
BLAST of CmoCh08G003580 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23882.16.8e-0824.56 Heavy metal transport/detoxification superfamily protein [more]
AT3G05220.12.2e-0638.81 Heavy metal transport/detoxification superfamily protein [more]
BLAST of CmoCh08G003580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189630|gb|KGN44863.1|4.3e-2034.19hypothetical protein Csa_7G392360 [Cucumis sativus][more]
gi|604299977|gb|EYU19820.1|3.7e-0847.22hypothetical protein MIMGU_mgv11b018162mg [Erythranthe guttata][more]
gi|641849946|gb|KDO68820.1|4.1e-0728.51hypothetical protein CISIN_1g043962mg, partial [Citrus sinensis][more]
gi|568852207|ref|XP_006479771.1|4.1e-0728.51PREDICTED: uncharacterized protein LOC102628147 [Citrus sinensis][more]
gi|1009147664|ref|XP_015891532.1|3.5e-0642.42PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Ziziphus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G003580.1CmoCh08G003580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 21..72
score: 3.
IPR006121Heavy metal-associated domain, HMAPROFILEPS50846HMA_2coord: 11..76
score: 11
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 8..76
score: 2.0
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 10..77
score: 5.4
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..82
score: 3.8E-21coord: 134..230
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G003580CmaCh08G003610Cucurbita maxima (Rimu)cmacmoB913
CmoCh08G003580Cla014739Watermelon (97103) v1cmowmB843
CmoCh08G003580ClCG09G006840Watermelon (Charleston Gray)cmowcgB785
CmoCh08G003580Lsi02G023140Bottle gourd (USVL1VR-Ls)cmolsiB809
CmoCh08G003580CsaV3_7G028560Cucumber (Chinese Long) v3cmocucB1073
CmoCh08G003580Cla97C09G169410Watermelon (97103) v2cmowmbB916
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G003580Cucumber (Chinese Long) v3cmocucB1035
CmoCh08G003580Cucumber (Chinese Long) v3cmocucB1066
CmoCh08G003580Watermelon (97103) v2cmowmbB905
CmoCh08G003580Wax gourdcmowgoB1113
CmoCh08G003580Wax gourdcmowgoB1129
CmoCh08G003580Cucurbita moschata (Rifu)cmocmoB319
CmoCh08G003580Cucurbita moschata (Rifu)cmocmoB485
CmoCh08G003580Cucumber (Gy14) v1cgycmoB0153
CmoCh08G003580Cucumber (Gy14) v1cgycmoB0154
CmoCh08G003580Cucurbita maxima (Rimu)cmacmoB374
CmoCh08G003580Cucurbita maxima (Rimu)cmacmoB838
CmoCh08G003580Wild cucumber (PI 183967)cmocpiB913
CmoCh08G003580Wild cucumber (PI 183967)cmocpiB920
CmoCh08G003580Cucumber (Chinese Long) v2cmocuB900
CmoCh08G003580Cucumber (Chinese Long) v2cmocuB907
CmoCh08G003580Melon (DHL92) v3.5.1cmomeB809
CmoCh08G003580Watermelon (Charleston Gray)cmowcgB809
CmoCh08G003580Watermelon (97103) v1cmowmB854
CmoCh08G003580Cucurbita pepo (Zucchini)cmocpeB839
CmoCh08G003580Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G003580Bottle gourd (USVL1VR-Ls)cmolsiB825
CmoCh08G003580Cucumber (Gy14) v2cgybcmoB955
CmoCh08G003580Cucumber (Gy14) v2cgybcmoB962
CmoCh08G003580Melon (DHL92) v3.6.1cmomedB912
CmoCh08G003580Silver-seed gourdcarcmoB0157
CmoCh08G003580Silver-seed gourdcarcmoB1161