CmoCh08G001850 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Endoplasmic reticulum, stress-associated Ramp4
Location	Cmo_Chr08 : 1083962 .. 1086759 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCGGCGCCCAATAAGCGTCTGGCGGTGACGCAAAATTCGGGACCGTATCAATGCCAGCCATTAAGTCAAATTATTTAAATCTCAAAATTACCGACCGAAGGATCAGACCATTAATCAACCGGAGAGAAAACTCGCCGCCCGGCCAGGAGGAGAATCGATCACTGCAATTCTTCGAATCTCTCCGGCTATTCAATTTCCTGCCAAGATCATGGTAATTTTCTTCCTCGTTTCGTTTCCATCTCAGATCTGTAAGTGCGGATGATTTTTGTCTAGGGTTTTGATCACTGACTCGTGATATCGATCGTTTTTCCTTAACTGAATTCGTTTATCATTGGATGGATCGTTTAATTCTTTTGCTAAGCAATTTTTTTTTTTTTTGTGGATTGTGATCCTTTTTTCTGTGTTCTTCGTTGAGAATTCGGTCTGAATCTGATCTGTTTTGCCATTATAGGTTTTTTTTTGTTTGACCTTTGGCTAATTGGTTTTTATTGCATCTCATTCCGAAATTGAGTGATTAAATGTTCGTATTAGTGGTCTTTTGACAATGTAGAATATGAGGAATTAGTGATTTGAAACTAGTGATAGTCTTTGATTGGGAAATTTTTAAAGGGATTTTGTAGTCAGTATTGGTCTGAACTCTTCGTGAAACCTAATTGAGAATATTTATAAGAATAGAGAAAAAACAGAACGGAGATTATTGGAAACAAGTAATCCCTCTTGGGTGTTAATCTAAGTTGATAGTTGTTTTCTCAAGTCTCAATTTTGTAATTTAGACCATCTTATCCTAAGATTTTTGGTCAACATATGGCTAGGTTATAGTTTTTAATGGGGGAAAAAAATTGAGCTTACAAAACGATTTCATTTTGTTTTGAATTATTAGTGCTGCTGAAACGCTCTGTATCCTAAATTTTTATATTTTTGAACAATACTTGATAAATGTTGCCTTCGGCTTTTGTAGACAACATCAAGGCGTCTTGCAGACCGAAAGGTCGGGAAGTTCGATAGGAATATCACAAGGAGAGGAGCTGTTCCAGAGACGACTGTTAAGAAGGGGAAGGATTATCCTGTTGGGCCCCTGCTGCTTGGATTCTTCATATTCGTTGTCATTGGATCATGTAAGACTAATCCTTTGTTGTGTTTATATCATTTAAGTTTTTGCTTCATCTGATATACAGTTTGTAGCTTAAGTTGTGGCTACTTCTTATAAACCAAGTATACGAGTTCTAGTTCTAGGCAAGGATTAAAATGGATAAAATCTGTGATTATAAATTTATAAATACATCTTGATATTAGTATTTAAATATGTATAATCTTTTATGGGTATTTATAAAAGATATGAGAGAGATTGATTAATCTTCAATATCAATGTTGAACCCTTTGATTTACGGATTTATGGATATTTTCATCCTTGGTTCGAGGTATAGGATGGAGTCAAGAACAAAGAAGGGAATTAACCTTAGTTTGTCTTAGATTCAAAATAGTATCTTAAAACAAGATGTTCAAGTTTTCATCTAACATGAAACACTTTTTATGTTTTTTTCCACCTAGTCGAGCTGTCTGAGTTTGATGGTGCATCTGGTAAGCTCTTTTAGTATTCATTTTCAGATTCGTCAATGCTCCATTCCTTCATTCACATTCGTCTCCTTCCCTTTTTCCAGCTCAGTATTCTGAGCTCATAGCTCTAATTTTTTTACTAGTCTTTCCCTCACATGTTATAGAGACAGTCCCGTAAGCCTTATTCCATCCTAGCTCTCATATCATTTGTCATGTTTTCGTTCTCTGTTGCATATCTGGATCATGCATCTTGTAAAATTTTGTCCGGGCAGAGTTTCCTGGCCTTGGGATGTGATTTTGCTCCCATGCTACCGAAACATTTTTTATCGAATGAGAGCAAAATTGCCCGTGCAGGATATGTCAATTTGTTGCTTATAATATAGGAGGAAATAGGTTCAAGCTACCCCGTTCATCTTCCTAAACTTAAGATCATGTAGTAAGGTTGGCGGTAGTGAAATTAATCTAGATGATTGCAAGAGGACTCAACCAAGAAAAACAGAACAAGTACGCTACCGTTTAATTCTTCGACTATACGAGTCTTATGTCCTTCACATGTTAGATCATGTCAGCTCAAAAGACGGAATTTATTCACATTGTGTTGCAATATGCGGATGAATTATCTAGGGAGGTCCCATGGTTTTATTACGTTTACCTCACCATCCTAGAACAACCTTCATTACCTGTCTTACAGGGTTGTGACATCTTTTTGATCTCGATTGCAAAACAACAAGCAAACTTGTCGTGTTCCAAGGATGATGTATTAATCTTGAAAATCTATGTCGAACCCACCATAGCATATATACTGACGAACATTTTCATCTTTGCCATGTTATCCCCCTTTTGTATTCAAAGGGTATTATGAATGTTACTAATCTTTGTTTACTCAACAGCGCTCTTCCAGATAATCAGGACAGCAACAGGAGGAGGAATGGCTTGATGCGATGCGATGCTCTGATTTTGAGAGAATGGCGTTACTGCTCGATCCCGTCCTCCCTTTCGTAGACGACACAGAAGGAAAGGGAAATTTTTTTAAAAAAAGGGAATGATTCCACAGTTCGTACTAGTGGATTTCAAGAACTTGATAATAGAATTGTTGGTCCTTTTCCTGCTTTGACATCATATTATTAACAATTGGTTTGGTTAAACTAATTTATTTCTTCCTTAAATGAAGTTATTTTCTATTGAGTTTTATAGTGTTTATTTCTTGTTTTCAGAACAGAATTCTTTTATCTTTTGGACCAG

mRNA sequence

TGGCGGCGCCCAATAAGCGTCTGGCGGTGACGCAAAATTCGGGACCGTATCAATGCCAGCCATTAAGTCAAATTATTTAAATCTCAAAATTACCGACCGAAGGATCAGACCATTAATCAACCGGAGAGAAAACTCGCCGCCCGGCCAGGAGGAGAATCGATCACTGCAATTCTTCGAATCTCTCCGGCTATTCAATTTCCTGCCAAGATCATGACAACATCAAGGCGTCTTGCAGACCGAAAGGTCGGGAAGTTCGATAGGAATATCACAAGGAGAGGAGCTGTTCCAGAGACGACTGTTAAGAAGGGGAAGGATTATCCTGTTGGGCCCCTGCTGCTTGGATTCTTCATATTCGTTGTCATTGGATCATCGCTCTTCCAGATAATCAGGACAGCAACAGGAGGAGGAATGGCTTGATGCGATGCGATGCTCTGATTTTGAGAGAATGGCGTTACTGCTCGATCCCGTCCTCCCTTTCGTAGACGACACAGAAGGAAAGGGAAATTTTTTTAAAAAAAGGGAATGATTCCACAGTTCGTACTAGTGGATTTCAAGAACTTGATAATAGAATTGTTGGTCCTTTTCCTGCTTTGACATCATATTATTAACAATTGGTTTGGTTAAACTAATTTATTTCTTCCTTAAATGAAGTTATTTTCTATTGAGTTTTATAGTGTTTATTTCTTGTTTTCAGAACAGAATTCTTTTATCTTTTGGACCAG

Coding sequence (CDS)

ATGACAACATCAAGGCGTCTTGCAGACCGAAAGGTCGGGAAGTTCGATAGGAATATCACAAGGAGAGGAGCTGTTCCAGAGACGACTGTTAAGAAGGGGAAGGATTATCCTGTTGGGCCCCTGCTGCTTGGATTCTTCATATTCGTTGTCATTGGATCATCGCTCTTCCAGATAATCAGGACAGCAACAGGAGGAGGAATGGCTTGA

Homology

[Close]

BLAST of CmoCh08G001850 vs. Swiss-Prot
Match: SERP2_BOVIN (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus GN=SERP2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.9e-07
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1


Query: 14 KFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG V +T   + + YPVGP LL  F+FVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of CmoCh08G001850 vs. Swiss-Prot
Match: SERP2_HUMAN (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens GN=SERP2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.9e-07
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1


Query: 14 KFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG V +T   + + YPVGP LL  F+FVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of CmoCh08G001850 vs. Swiss-Prot
Match: SERP2_MOUSE (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus GN=Serp2 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 7.9e-07
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1


Query: 14 KFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATGG 66
          K  +NIT+RG V +T   + + YPVGP LL  F+FVV GS++FQII++   G
Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]

BLAST of CmoCh08G001850 vs. TrEMBL
Match: A0A0A0KD83_CUCSA (Stress associated endoplasmic reticulum protein OS=Cucumis sativus GN=Csa_6G087710 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.7e-27
Identity = 62/68 (91.18%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNIT+RG+VPET+VKKGK+YPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TrEMBL
Match: M5XI11_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014280mg PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.0e-26
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKV KF++NIT+RGAVPETT KKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TrEMBL
Match: A0A061E642_THECC (Ribosome associated membrane protein RAMP4 OS=Theobroma cacao GN=TCM_008766 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKV KF++NIT+RG VPETT KKGKDYPVGPLLLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TrEMBL
Match: A9PER5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16960g PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-25
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKV +FD+NI+RRGAVPETT KKG DYPVGPLLLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVNRFDKNISRRGAVPETTTKKGNDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATDGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TrEMBL
Match: A0A0B0NAE6_GOSAR (Serp2 OS=Gossypium arboreum GN=F383_13890 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-25
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLA+RKV KF +NIT+RGAVPETT KKGKDYPVGPLLLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLAERKVEKFQKNITKRGAVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TAIR10
Match: AT1G27350.1 (AT1G27350.1 Ribosome associated membrane protein RAMP4)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-27
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTS+RLADRK+ KFD+NI +RG VPETT KKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. TAIR10
Match: AT1G27330.1 (AT1G27330.1 Ribosome associated membrane protein RAMP4)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-27
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTS+RLADRK+ KFD+NI +RG VPETT KKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. NCBI nr
Match: gi|659120090|ref|XP_008460008.1| (PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27
Identity = 63/68 (92.65%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNIT+RG+VPET+VKKGK+YPVGPLLLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. NCBI nr
Match: gi|778711512|ref|XP_011656747.1| (PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-27
Identity = 62/68 (91.18%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF+RNIT+RG+VPET+VKKGK+YPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFERNITKRGSVPETSVKKGKEYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. NCBI nr
Match: gi|1009152794|ref|XP_015894289.1| (PREDICTED: stress-associated endoplasmic reticulum protein 2 [Ziziphus jujuba])

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-26
Identity = 61/68 (89.71%), Postives = 67/68 (98.53%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKVGKF++NIT+RGAVPET+VKKGKDYPVGP+LLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVGKFEKNITKRGAVPETSVKKGKDYPVGPVLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GG+A
Sbjct: 61 TATSGGVA 68

[Close]

BLAST of CmoCh08G001850 vs. NCBI nr
Match: gi|596217240|ref|XP_007223937.1| (hypothetical protein PRUPE_ppa014280mg [Prunus persica])

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-25
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKV KF++NIT+RGAVPETT KKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGAVPETTAKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]

BLAST of CmoCh08G001850 vs. NCBI nr
Match: gi|590692151|ref|XP_007043980.1| (Ribosome associated membrane protein RAMP4 [Theobroma cacao])

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1


Query: 1  MTTSRRLADRKVGKFDRNITRRGAVPETTVKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60
          MTTSRRLADRKV KF++NIT+RG VPETT KKGKDYPVGPLLLGFFIFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

The following BLAST results are available for this feature:

BLAST of CmoCh08G001850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SERP2_BOVIN	7.9e-07	50.00	Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus GN=SERP2 PE=3 SV...	[more]
SERP2_HUMAN	7.9e-07	50.00	Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens GN=SERP2 PE=1 ...	[more]
SERP2_MOUSE	7.9e-07	50.00	Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus GN=Serp2 PE=3 ...	[more]

BLAST of CmoCh08G001850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD83_CUCSA	3.7e-27	91.18	Stress associated endoplasmic reticulum protein OS=Cucumis sativus GN=Csa_6G0877...	[more]
M5XI11_PRUPE	9.0e-26	88.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014280mg PE=4 SV=1	[more]
A0A061E642_THECC	1.2e-25	89.71	Ribosome associated membrane protein RAMP4 OS=Theobroma cacao GN=TCM_008766 PE=4...	[more]
A9PER5_POPTR	1.2e-25	89.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16960g PE=2 SV=1	[more]
A0A0B0NAE6_GOSAR	2.0e-25	89.71	Serp2 OS=Gossypium arboreum GN=F383_13890 PE=4 SV=1	[more]

BLAST of CmoCh08G001850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27350.1	1.1e-27	83.82	Ribosome associated membrane protein RAMP4	[more]
AT1G27330.1	1.1e-27	83.82	Ribosome associated membrane protein RAMP4	[more]

BLAST of CmoCh08G001850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120090\|ref\|XP_008460008.1\|	4.0e-27	92.65	PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis melo]	[more]
gi\|778711512\|ref\|XP_011656747.1\|	5.3e-27	91.18	PREDICTED: stress-associated endoplasmic reticulum protein 2-like [Cucumis sativ...	[more]
gi\|1009152794\|ref\|XP_015894289.1\|	4.5e-26	89.71	PREDICTED: stress-associated endoplasmic reticulum protein 2 [Ziziphus jujuba]	[more]
gi\|596217240\|ref\|XP_007223937.1\|	1.3e-25	88.24	hypothetical protein PRUPE_ppa014280mg [Prunus persica]	[more]
gi\|590692151\|ref\|XP_007043980.1\|	1.7e-25	89.71	Ribosome associated membrane protein RAMP4 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010580	ER_stress-assoc

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0022857	transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001850.1	CmoCh08G001850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010580	Stress-associated endoplasmic reticulum protein	PANTHER	PTHR15601	STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4	coord: 2..68 score: 6.7
IPR010580	Stress-associated endoplasmic reticulum protein	PFAM	PF06624	RAMP4	coord: 5..62 score: 5.8
None	No IPR available	PANTHER	PTHR15601:SF4	SUBFAMILY NOT NAMED	coord: 2..68 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G001850	Cucsa.348610	Cucumber (Gy14) v1	cgycmoB0956
CmoCh08G001850	CmaCh08G001810	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G001850	Csa6G087710	Cucumber (Chinese Long) v2	cmocuB894
CmoCh08G001850	MELO3C022421	Melon (DHL92) v3.5.1	cmomeB804
CmoCh08G001850	CSPI06G06740	Wild cucumber (PI 183967)	cmocpiB907
CmoCh08G001850	Lsi09G018240	Bottle gourd (USVL1VR-Ls)	cmolsiB801
CmoCh08G001850	Cp4.1LG17g10720	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G001850	CsaV3_6G007080	Cucumber (Chinese Long) v3	cmocucB1060
CmoCh08G001850	Bhi12G002187	Wax gourd	cmowgoB1086
CmoCh08G001850	CsGy6G006750	Cucumber (Gy14) v2	cgybcmoB858
CmoCh08G001850	Carg11603	Silver-seed gourd	carcmoB0023
CmoCh08G001850	Carg05010	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G001850	CmoCh17G013880	Cucurbita moschata (Rifu)	cmocmoB315

The following block(s) are covering this gene:

None