CmoCh07G007790 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G007790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Shikimate kinase
Location	Cmo_Chr07 : 3522770 .. 3527661 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTTTTTTCTTTATGGCGGTTTGTTTGAATTTCTGGCGGAGCCGGAGCGACAACAGTTATAGCGCGCACCAAATTCGATACTCGTACCGGTGATCTTGAAACCTCTCTTCCAGAACCACATGTGCATAGAAATTTGTCACCGCTTGCCCTTCTTTTGGCTTTGATTCTCACATTCTTCATCCTGTTTTGCTTGCCTTTTTGTGTGTGCTACGCGACTTTCACTGAGTTTGTGCTCTCATTTGTTTCCAAATAATTTCACGGCATCCGATCTTTTTTACTGGTTTGGAGTTGCAAAATTTTTTGAGTTTGATCGTTGAAGCTCTACTCTGTCTGTAAGTTTCGTTCCTTCTGAAAGAGTTTGAACCGTTTTCCTGGTTGTTTTTCGAGCTTTCTTACGATTTGATGTTTCTGTAATGCAACTTGGCGTTGATTTGAATTTTTATATTTTGTTTCTGATAATTATTTTCAGTTTTTTATTCACTTTCACTCTTTTAAATCTAATTCTCTTGAGTGATTAATGTTCAATTGAAACTTTAGGTCGTGTGGGGTTATCTAATCCAGTTAGCTGAGAAACTGAGGGAATTTTGGCAGCGACTATGGAGGTCAACGTAGGACATCTGCAGAATTTATCAATCCGGATTGATTCCGGAATGTTTGCGAGGAAACCGAGTGGTTCGGTCCGGTTTCTTCCCCCAATTTCTAAACAGCAGAAGCTGCCACCGGTGGTTTCAGCTTTTCAGCAACCTTTGAGACTTTCTAATCGATGCAGGACGATCTCTGTTGGGGCCTCCTGCTATCGTGAGAATATTTCAGGTAATACAAGATATTGAACTTCCACCGTGATTATAAATGTGCGTTTCTCTTTGTCATTTTTCCTCGTTTCTTTCTTTCGTTAATTCCTTTAAATATTGTCTGAGTTATATTCTCATTTACTATTATTGACTTGGTGATCGGAACTGAATCTATAATATATGCTTCTATTGCTTTTCATGGCTGAGCTTGATTTGTAGTCAGAACTTCAAATCTAATATTTGGATTTTGTTTTTTTGTTTCCTTACGAGAAGTTACAGTCATTTGGATTCTAAAAAGAGTTTTTGGTAAATTCCTCTGCGTCCATTTTCTGTCCTAATTTAATTTTGCATTTCTATTAATAATAAAACATTATGAAAAGCATGAACTACACAGTATAAAAGCAGTCTTATGCTACGTCTACGGCCAAATGATTTGTAGAGTTGTTTCTGTTGATTTCAACGGAACCTTTTGGATTCTGAAAACCTCAACATTTTGTTTTGGCCAATGAATTAAGAACGACCTTTTATTCTAAGTAAACAAAAGGAACAAGAATAAAAGAAAATGATACTCATTTCAAAGAAATGAAAATTGCTGTAGTGATTTTTTAGGTGATTAAATGGATAATGTATAAAATGGTCTCACACTTGGCGTATAAAATCCTTGAAAAATGCATCTCAGCAATTGATCCTCCCTGTTATTATAACCGGTCTCTCAGTGAGTAATATTTTTATTTAGATGTTCTTCTGTCAGACTTTCGAGCATCTGAACCCTTCAAATCTTTGAAGGAGAAGTACTACGCAGAATAGATCCACATTTTTTTACATCATCTTGTAGATATTTTCCATTAGTGACTTTGTTGTCATTAGAAAGACATGCCTTTTATTTTGTTATTTCATTGTTGTCATGAATGATGAATAATCTGTATCGTATTGTCTTCCTCTTGCTTGTCTACAGCAAGCAAGGAAGGTAACCAATTGATTTTGACTTGTTGCTTTCCAATATTCCTTTTGTAGGTTTGGCGTTGGAAACTGAAAATTTTCATCCTTTTGACAAAGATCTACTTTTAAAGGTCAAGCAGAATTCTTGTTTGTTATATTTACTTAAATCTCAAGTAGAGTTGGGGTGACGTGGGATATGTGCTTTTTCTTTCTGATTCATCGAATATACTATTCTCCCCTTCCTTAAATAGCTTTTGGACGATAATTGGTGCAATTTGAACCTTCAAATGTGCAACTCTTAAAGTTTATCTAACTAGAATTTGGAAATATTGCAGAATAAGTCACAAGAGGTCCAGCCCCATCTAAATGGAAAATGCATATATCTAGTCGGTTAGTGTCTTTTCTTATTTACACTTTGTAATTGGCAATTCTTCTGCTTGGATACTAAATCTATCAAAGTGCTCATTTGCAGGAATGATGGGCAGTGGAAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGAGTTACGCATTTTCTGACAGGTTGTTATTTAATTGCTAACTAGCATAGTACTTGTACTCCGGTTTGAAGTTTAATAAACAAGGAAAGAATGATTATATTGGAAGAAAAATTATTGCCCAATTTCCTCACTGTCACATCATTTTTCCCGCATCCAAGGTCTACTATGAAGCTGAACTGGGCTGGAAGAACAGTACTAAAGTGATATTGAGGACTATTGTAGTCGAATGAATTTAGTGAAGAGTTGCAGCTCCTGATGCAATAAATTGGATTTGCATTAACATCCAATATATGAATTTTTACTATTCTTTCTGATAGAAAATTATGGCATTTATAATTTGCCTCCATCTTGATCCCACATATGTTATTGGAAGTTTCTTGTGAGTGATTTTCTTTCATATTAATTATGCATTACATATCTGGATGCTCCAGTGATACATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTTAAGCTTTATGGCGAGGACTTTTTCAGAGACAAGGAGGTTAGTGATGGTGGATGCCATATGACTATCCTTTCCATCTGTGAAGTAGGTGGTTATTACTCTCTACTGTATTTGAGGTTTTTATGAATTGAATGTAATGTGGGAAGTACAGTGCTTTGTAGATAATTTTCATTGAAATGAGCATATTTTAAATTCTTACGATGCTAGAAGAGGAAAATGTCTGCATGTGATTTCCCTGCTTCCTTTTTTATAGGAATGGGAAGGAATCTGGATTTCTTAGTAATAGTGGGGTTTAGGAATGTCCAAAAGCCTGATGAATTTTTCAGTTAGGTTGAGTTAAAAACTTGTGTAGATTGGTTTGACTACACATAGGTTGAACCTCTGGGGTAGTTAATAAGTATCAAACTTAGTAGTTTGGATTGAACCAAATGAAAGAAAATTGTTTTTCGTATAATAAGGTAAAATAATATAATGAACAACTATTTATAATTTAAGGCATGGAAATAGAGTTAAAGATCTTAATTACTTTTTCTTCAAAGTTTAACGATCAATGATTTGAATGGTCTCAACCAACCCATATAACATGGTTAGGCTCGGTTGAGTTTTGTCCATTACTTAATTCGAGGTTATTTAGGCTGGACAAATTTTACCTGAGCTTTTGTATTGGGTGAAAAATGTCTTTGAATTAAGCTCCTGAACCCACCCCACTGACACCCCTCCCTATTAATTGATTTATTTAAAGTTTGATTGTTGATTTGCTGAACTAGTCGTGGAACTATCAATCATCGATGGATGATATTTTGACAAAGTTTTGAAAACTATGCCGTTTTCTCAAATAGGATGGTTATCAGCCATTCTTGCTACCATCCCCTAGTAACTTCTGCTATGTCTTTTTCCTCTCGTCTAGCTGCTATGCTTTCAAGCAGCTAAGAAAATGTTTTGCAACTCTGAGCTATTATGGCAGATCCAAATTAGTGACAGTGATTTTCCTGTTAGACTGAGGTATTGAGAAAACTATCATCGATGCACGGGTTTGTGATTTCCACTGGTGGAGGTATTGTTGTTCGGCCTATTAACTGGTTAGTAGTTCGGACACGTGACGATTTCTAGTTGTTATGTTGGTCGTCTGTTGTTGATTAGTGAGAGTCGTCCTATTCGATTGTAGGAAATATATGCAGAACGGGATTAGCATCTGGCTAGACGTGCCATTGGAAGCCTTGGCAAAAAGAATTGCTGCAGTAGGTACCGACTCACGCCCCCTCTTGCATAATGAGTCGGGCAATGGCTACACAAAGGTCCAATCATCCAGTCAATGTTTTTACTTATTTAGTTGTGATGCTTGATCCTAATACATCTTTTAATCTTCTGATTCTCACTCAGGCTTTCAGACGACTCTCAGTTCTTCTGGAGGAGAGGGGTGATGCATATACCAACGCCAATGTCAAAGTTTGTTTAGGAAGTATGAATGAAATAAGAACATCTTCATATTCCTCTGTCTGTCTAGAAAAAAAGAGAGTAGTAGAAAGCTAATAACATGATTTTCTGTTCCATTCATTCTCAAGTTACAATGAATGTTTGTTATTTCTATATCTTCTTCTTCTGTTTAAGCACAGGTTTTTGTTAACATTGCAGGTCTTGCAGCCAAACTGGGTTTGTCAGATGTATGTAATCTGACCCCTGAAGATATTGCTATAGAGGTCCCTCTCCTTCTGCCTCCTCATTTATCTTTGTTCCTGTTATGCATGATGATTAAACAAACGATCCAATTTGTTTTGAATTGAAGTATTTTTCCTCCTTCGCAGGCGCTTGTACAAATCCAGCACTTCGTGGAGCATGAAGATGGCTATTGTACAAGTTAAGACTACTGCAGATCATCATCCGGTGTTTAAAGCCTCCTCTCTTCTTAAAGAAGCACGGAATGGCATTGCTTCTACTCTTGCCAATTGTATAACATGGGATCATCAGGTATGAATAACCACTTGGAATGGAACGTCGTCAGTGTTAGAAGTGTATCTATCAAAATTTTGAGACAAATAAAATCTTCTTTTTTTCTTAATTTCTGGGATAATGTATGATATTTATTATATAGTCCATTGCATTTGAAATAAAAAGGCAACTTTTCAAGTTTTAATTTATATTTCATTTTAATTTTGTA

mRNA sequence

CTTTTTTTTTTTCTTTATGGCGGTTTGTTTGAATTTCTGGCGGAGCCGGAGCGACAACAGTTATAGCGCGCACCAAATTCGATACTCGTACCGGTGATCTTGAAACCTCTCTTCCAGAACCACATGTGCATAGAAATTTGTCACCGCTTGCCCTTCTTTTGGCTTTGATTCTCACATTCTTCATCCTGTTTTGCTTGCCTTTTTGTGTGTGCTACGCGACTTTCACTGAGTTTGTGCTCTCATTTGTTTCCAAATAATTTCACGGCATCCGATCTTTTTTACTGGTTTGGAGTTGCAAAATTTTTTGAGTTTGATCGTTGAAGCTCTACTCTGTCTGTCGTGTGGGGTTATCTAATCCAGTTAGCTGAGAAACTGAGGGAATTTTGGCAGCGACTATGGAGGTCAACGTAGGACATCTGCAGAATTTATCAATCCGGATTGATTCCGGAATGTTTGCGAGGAAACCGAGTGGTTCGGTCCGGTTTCTTCCCCCAATTTCTAAACAGCAGAAGCTGCCACCGGTGGTTTCAGCTTTTCAGCAACCTTTGAGACTTTCTAATCGATGCAGGACGATCTCTGTTGGGGCCTCCTGCTATCGTGAGAATATTTCAGGTTTGGCGTTGGAAACTGAAAATTTTCATCCTTTTGACAAAGATCTACTTTTAAAGAATAAGTCACAAGAGGTCCAGCCCCATCTAAATGGAAAATGCATATATCTAGTCGGAATGATGGGCAGTGGAAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGAGTTACGCATTTTCTGACAGTGATACATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTTAAGCTTTATGGCGAGGACTTTTTCAGAGACAAGGAGGTTAGTGATGGTGGATGCCATATGACTATCCTTTCCATCTGTGAAACTGAGGTATTGAGAAAACTATCATCGATGCACGGGTTTGTGATTTCCACTGGTGGAGGTATTGTTGTTCGGCCTATTAACTGGAAATATATGCAGAACGGGATTAGCATCTGGCTAGACGTGCCATTGGAAGCCTTGGCAAAAAGAATTGCTGCAGTAGGTACCGACTCACGCCCCCTCTTGCATAATGAGTCGGGCAATGGCTACACAAAGGCTTTCAGACGACTCTCAGTTCTTCTGGAGGAGAGGGGTGATGCATATACCAACGCCAATGTCAAAGTTTGTTTAGGAAGTCTTGCAGCCAAACTGGGTTTGTCAGATGTATGTAATCTGACCCCTGAAGATATTGCTATAGAGGCGCTTGTACAAATCCAGCACTTCGTGGAGCATGAAGATGGCTATTGTACAAGTTAAGACTACTGCAGATCATCATCCGGTGTTTAAAGCCTCCTCTCTTCTTAAAGAAGCACGGAATGGCATTGCTTCTACTCTTGCCAATTGTATAACATGGGATCATCAGGTATGAATAACCACTTGGAATGGAACGTCGTCAGTGTTAGAAGTGTATCTATCAAAATTTTGAGACAAATAAAATCTTCTTTTTTTCTTAATTTCTGGGATAATGTATGATATTTATTATATAGTCCATTGCATTTGAAATAAAAAGGCAACTTTTCAAGTTTTAATTTATATTTCATTTTAATTTTGTA

Coding sequence (CDS)

ATGGAGGTCAACGTAGGACATCTGCAGAATTTATCAATCCGGATTGATTCCGGAATGTTTGCGAGGAAACCGAGTGGTTCGGTCCGGTTTCTTCCCCCAATTTCTAAACAGCAGAAGCTGCCACCGGTGGTTTCAGCTTTTCAGCAACCTTTGAGACTTTCTAATCGATGCAGGACGATCTCTGTTGGGGCCTCCTGCTATCGTGAGAATATTTCAGGTTTGGCGTTGGAAACTGAAAATTTTCATCCTTTTGACAAAGATCTACTTTTAAAGAATAAGTCACAAGAGGTCCAGCCCCATCTAAATGGAAAATGCATATATCTAGTCGGAATGATGGGCAGTGGAAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGAGTTACGCATTTTCTGACAGTGATACATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTTAAGCTTTATGGCGAGGACTTTTTCAGAGACAAGGAGGTTAGTGATGGTGGATGCCATATGACTATCCTTTCCATCTGTGAAACTGAGGTATTGAGAAAACTATCATCGATGCACGGGTTTGTGATTTCCACTGGTGGAGGTATTGTTGTTCGGCCTATTAACTGGAAATATATGCAGAACGGGATTAGCATCTGGCTAGACGTGCCATTGGAAGCCTTGGCAAAAAGAATTGCTGCAGTAGGTACCGACTCACGCCCCCTCTTGCATAATGAGTCGGGCAATGGCTACACAAAGGCTTTCAGACGACTCTCAGTTCTTCTGGAGGAGAGGGGTGATGCATATACCAACGCCAATGTCAAAGTTTGTTTAGGAAGTCTTGCAGCCAAACTGGGTTTGTCAGATGTATGTAATCTGACCCCTGAAGATATTGCTATAGAGGCGCTTGTACAAATCCAGCACTTCGTGGAGCATGAAGATGGCTATTGTACAAGTTAA

Homology

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BLAST of CmoCh07G007790 vs. Swiss-Prot
Match: SK1_ARATH (Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1 PE=1 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 8.5e-80
Identity = 155/285 (54.39%), Postives = 204/285 (71.58%), Query Frame = 1


Query: 26  GSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTISVGASCYRENISGLALETENFHPFD 85
           GS+R+   +   ++   +  A  QP R +++ R +S   SC   N S L LET + +PFD
Sbjct: 27  GSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRAVSPAVSCSDNNSSAL-LETGSVYPFD 86

Query: 86  KDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELSYAFSDSDTLVEQEVGGT 145
           +D+L K K++EV+P+LNG+ +YLVGMMGSGKTT+GK+++K L Y F D DTL+EQ + GT
Sbjct: 87  EDIL-KRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGT 146

Query: 146 SVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSMHGFVISTGGGIVVRPIN 205
           SVAEIF  +GE+FFR KE               T+ L+KLSS +  V+STGGG V+RPIN
Sbjct: 147 SVAEIFVHHGENFFRGKE---------------TDALKKLSSRYQVVVSTGGGAVIRPIN 206

Query: 206 WKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYTKAFRRLSVLLEERGDAY 265
           WKYM  GISIWLDVPLEALA RIAAVGTDSRPLLH+ESG+ Y+ AF+RLS + +ERG+AY
Sbjct: 207 WKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAY 266

Query: 266 TNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFVEHED 311
           TNAN +V L ++AAK G  +V +LTP +IAIEA  Q+  F+E E+
Sbjct: 267 TNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKEE 294

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BLAST of CmoCh07G007790 vs. Swiss-Prot
Match: SK_SOLLC (Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.7e-75
Identity = 150/308 (48.70%), Postives = 201/308 (65.26%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME  V     LS  I+S    RKPSG +RF    +++ +   VVS   QP + ++  R +
Sbjct: 1   MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 61  SVGASCYRENISGLALETENFHP-FDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTI 120
            +  SC  +N+    LE+  F    D+   LKNK++EV+ +L+G+C+YLVGMMG GKTT+
Sbjct: 61  QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 121 GKILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICET 180
           G+ILA+ L Y+F D D L+EQ VGG +VAEIF+L GE FFRD E               T
Sbjct: 121 GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNE---------------T 180

Query: 181 EVLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLL 240
           EVL KLS MH  V+STGGG VVRPINW++M  GIS+WLDVPLEALAKRI   GT SRPLL
Sbjct: 181 EVLHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLL 240

Query: 241 HNESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEAL 300
           H ESG+ Y    +RL+ L+E RG+ Y NA+ +V L ++A K    DVC++TP +I +E L
Sbjct: 241 HEESGDVYDTTLKRLTTLMETRGENYANASARVSLENIALKRE-KDVCHITPAEITLEVL 292

Query: 301 VQIQHFVE 308
           +QI++F++
Sbjct: 301 IQIENFLK 292

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BLAST of CmoCh07G007790 vs. Swiss-Prot
Match: SK2_ARATH (Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.5e-71
Identity = 155/297 (52.19%), Postives = 197/297 (66.33%), Query Frame = 1


Query: 20  FARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTISVGASCYRENISGLALETE 79
           F  KP GS+R+     K+ K   VV A     R  +R R++S       +  S   LET 
Sbjct: 20  FEGKPRGSLRYNTQRIKEDKRFRVV-ALTLDKRRDHRLRSVS-------DKNSSALLETG 79

Query: 80  NF--HPFDKDL-LLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELSYAFSDSDT 139
           +    PFD++  +LK K++EV+P+LNG+ +YLVGMMGSGKTT+GKI+A+ L Y F D DT
Sbjct: 80  SLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDT 139

Query: 140 LVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSM-HGFVIST 199
           L+EQ + GTSVAEIF+ +GE  FR+K               ETE L+KLS M H  V+ST
Sbjct: 140 LIEQAMKGTSVAEIFEHFGESVFREK---------------ETEALKKLSLMYHQVVVST 199

Query: 200 GGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH-NESGNGYTKAFRRL 259
           GGG V+RPINWKYM  GISIWLDVPLEALA RIAAVGT SRPLLH +ESG+ YT A  RL
Sbjct: 200 GGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRL 259

Query: 260 SVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFVEHEDG 312
           S + + RG+AYT A+ +V L ++  KLG   V +LTP +IAIEA  Q+Q ++E EDG
Sbjct: 260 STIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDG 293

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BLAST of CmoCh07G007790 vs. Swiss-Prot
Match: SK3_ORYSJ (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-68
Identity = 148/298 (49.66%), Postives = 200/298 (67.11%), Query Frame = 1


Query: 15  IDSGMFARKPSGSVRFL--PPISKQQKLPP--VVSAFQQPLRLSNRCRTIS--VGASCYR 74
           +D+G+  R   G+   L  P  S   ++P    V  F QPL L +  R+    +  SC R
Sbjct: 1   MDAGVGLRAKPGAWAGLGNPRRSSTARVPVRFAVEKFAQPLVLGSDRRSCGAKLKVSCSR 60

Query: 75  ENISGLALETENFHPFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELS 134
           +  +G+    + ++  D+ L+LK K+++V P+LN +CIYLVGMMGSGKTT+GKILA+ L 
Sbjct: 61  KP-AGI---DKTYYSADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLG 120

Query: 135 YAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSM 194
           Y+F DSD LVE+ VG +SVAEIF+L+ E FFRD E               +EVLR LSSM
Sbjct: 121 YSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNE---------------SEVLRDLSSM 180

Query: 195 HGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYT 254
           H  V++TGGG V+RPINW YM+ G +IWLDVPL+ALA+RIAAVGT SRPLLH ESG+ Y 
Sbjct: 181 HRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASRPLLHQESGDPYA 240

Query: 255 KAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFV 307
           KA+ +L+ L E+R D+Y NA+ +V L  +A K G S+V  LTP  IAIEAL++++ F+
Sbjct: 241 KAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMESFL 279

[Close]

BLAST of CmoCh07G007790 vs. Swiss-Prot
Match: SK2_ORYSJ (Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=SK2 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.8e-67
Identity = 135/225 (60.00%), Postives = 165/225 (73.33%), Query Frame = 1


Query: 85  DKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELSYAFSDSDTLVEQEVGG 144
           D+ LLLK KS+EV  +LNG+CIYLVGMMGSGK+T+ KILA+ L Y+F DSD LVEQ VG 
Sbjct: 76  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135

Query: 145 TSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSMHGFVISTGGGIVVRPI 204
            SVA+IFK + E FFRD E S               VLR LSSM   V++TGGG V+RP+
Sbjct: 136 PSVAQIFKEHSEAFFRDNESS---------------VLRDLSSMRRLVVATGGGAVIRPV 195

Query: 205 NWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYTKAFRRLSVLLEERGDA 264
           NWKYM+ G+S+WLDVPL+ALA+RIA VGT SRPLL   S + YT AF +LS+L E+RGDA
Sbjct: 196 NWKYMKKGLSVWLDVPLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDA 255

Query: 265 YTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFV-EH 309
           Y NA+ +V L  +AAK G  DV  LTP DIAIEAL++I++FV EH
Sbjct: 256 YANADARVSLEEIAAKQGHDDVSKLTPTDIAIEALLKIENFVTEH 285

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BLAST of CmoCh07G007790 vs. TrEMBL
Match: A0A0A0KFZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487590 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 7.6e-144
Identity = 263/315 (83.49%), Postives = 276/315 (87.62%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           MEVN GHLQ+LSIRID GM  RKPSGSVRFL PIS QQKLP +VSAFQQPLRLSNRCRT+
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVGASCYRENISGLALETENFHPFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIG 120
           SV  SCYRENISGL LETE  HPFDKDLLLKNKSQEVQPHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETE 180
           KILAKEL Y FSDSDTLVEQEVGGTSVA+IFKL+GE FFRDK               ETE
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDK---------------ETE 180

Query: 181 VLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240
           VLRKLS MHGFVISTGGGIVVRPINWKYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLH
Sbjct: 181 VLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240

Query: 241 NESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALV 300
           +ESGN YTKAFRRLSVLLEERGDAY NAN KVCLGSLA KLGLSDVCNLTP DIA+EALV
Sbjct: 241 HESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALV 300

Query: 301 QIQHFVEHEDGYCTS 316
           QIQ+F+E E+ Y T+
Sbjct: 301 QIQNFLEQENDYATT 300

[Close]

BLAST of CmoCh07G007790 vs. TrEMBL
Match: Q30CZ9_FAGSY (Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.6e-91
Identity = 184/303 (60.73%), Postives = 219/303 (72.28%), Query Frame = 1


Query: 11  LSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSA-FQQPLRLSNRCRTISVGASCYRE 70
           +S RI S  FAR+  GSVR      +Q +LP +VSA  Q   R SN  +T S+  SC  +
Sbjct: 11  VSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKTASLEVSCSYK 70

Query: 71  NISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELS 130
           N     LE+   H PFD  L+LKNKSQE++P+L+G+CIYLVGMMGSGKTT+GK+L++ LS
Sbjct: 71  NFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLS 130

Query: 131 YAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSM 190
           YAF DSDTLVEQ+V   SVAEIF LYGE FFRDKE               TEVLRKLS M
Sbjct: 131 YAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKE---------------TEVLRKLSLM 190

Query: 191 HGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYT 250
           H  V+STGGG VVRPINWKYMQ GIS+WLDVPLEALA+RIAAVGT SRPLLH++SG+ YT
Sbjct: 191 HRLVVSTGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYT 250

Query: 251 KAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFVEH 310
           K F RL+ L+EER +AY NAN +V L  +AAKLG  DV NLTP  IAIEAL QI+ F++ 
Sbjct: 251 KTFMRLTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKE 298

Query: 311 EDG 312
           E+G
Sbjct: 311 ENG 298

[Close]

BLAST of CmoCh07G007790 vs. TrEMBL
Match: M5W0C8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009120mg PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.5e-91
Identity = 179/313 (57.19%), Postives = 221/313 (70.61%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME  V H    S  IDS   AR+PS S R    + +Q KL  +V+A     R+SNR R +
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPSSRVSNRQRHV 63

Query: 61  SVGASCYRENISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTI 120
           ++  SC         +E+ NF  PFD+ L+LKNK+Q ++P+LNG+CIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICET 180
           GKIL++ ++Y+F DSDTLVE EVGGTSVAEIFKL GE FFRDKE               T
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKE---------------T 183

Query: 181 EVLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLL 240
           EVLRKLS MH  V+STGGG VVRPINWK M+ GIS+WLDVPLEALA+RIAAVGT SRPLL
Sbjct: 184 EVLRKLSLMHHLVVSTGGGAVVRPINWKCMKKGISVWLDVPLEALAQRIAAVGTGSRPLL 243

Query: 241 HNESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEAL 300
           H+ESG+ Y K F RL+ L E+RGD+Y NA+ +V L ++AAKLG  DV +LTP  I IE L
Sbjct: 244 HHESGDAYRKTFMRLTSLFEQRGDSYANASARVSLENIAAKLGYRDVSSLTPTAIVIEVL 301

Query: 301 VQIQHFVEHEDGY 313
            QI+ F++ EDG+
Sbjct: 304 EQIEVFLKEEDGH 301

[Close]

BLAST of CmoCh07G007790 vs. TrEMBL
Match: V4S1P4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026159mg PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.1e-85
Identity = 177/312 (56.73%), Postives = 216/312 (69.23%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME  V H       I    F RK SGSVRF   + ++++L  ++SA  +P   S +    
Sbjct: 1   MEAKVLHKLQCPTWIALEKFPRKSSGSVRFSRRMREEKRLRVLISAQMEPNVASKQRSYD 60

Query: 61  SVGASCYRENISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTI 120
           SV  SC   ++S   LE+ N H P D+  +LKNKSQE++P+L+G+CIYLVGMMGSGKTT+
Sbjct: 61  SVKVSCTFNSLSASVLESGNVHAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTV 120

Query: 121 GKILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICET 180
           GKIL+  L Y+F D DTL+EQ V GTSVAEIFKLYGE FFR+K               ET
Sbjct: 121 GKILSGVLGYSFFDCDTLIEQSVDGTSVAEIFKLYGEGFFREK---------------ET 180

Query: 181 EVLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLL 240
           EVL+KLS M   V+STGGG V RPINW+YMQ GIS+WLDVPLEALA+RIAAVGTDSRPLL
Sbjct: 181 EVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISVWLDVPLEALAQRIAAVGTDSRPLL 240

Query: 241 HN-ESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEA 300
           H  ESG+ YT+A  RLS L EERG+AY NAN +V L ++A KLG  DV +LTP  IAIEA
Sbjct: 241 HQCESGDAYTEALNRLSTLWEERGEAYANANARVSLENIAVKLGHKDVSSLTPVTIAIEA 297

Query: 301 LVQIQHFVEHED 311
           L QI+ F++ ED
Sbjct: 301 LEQIEGFLKEED 297

[Close]

BLAST of CmoCh07G007790 vs. TrEMBL
Match: A0A067KSL7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09404 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84
Identity = 172/309 (55.66%), Postives = 221/309 (71.52%), Query Frame = 1


Query: 5   VGHLQNLSIRIDSGMFARK-PSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTISVG 64
           VG +Q  S  ID G    K P+GS+R    + ++Q+L    SA  Q     NR  ++S  
Sbjct: 6   VGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHGSVSFK 65

Query: 65  ASCYRENISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKI 124
            SC  +N     LE+ +     D+ L+LK+KSQEV P++NG+CIYLVGMMGSGKTT+GK+
Sbjct: 66  VSCSYQNFPASVLESGSLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGKTTVGKV 125

Query: 125 LAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVL 184
           L++ L+Y+F D DTL+E+EV G SVAEIFKLYGE +FR+KE               TEVL
Sbjct: 126 LSQVLAYSFCDCDTLIEEEVQGISVAEIFKLYGEGYFRNKE---------------TEVL 185

Query: 185 RKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNE 244
           +KLS MH  V+STGGG VVRPINW++M+ GIS+WLDVPLEALA+RIAAVGT+SRPLL++E
Sbjct: 186 KKLSMMHHVVVSTGGGAVVRPINWQHMRKGISVWLDVPLEALAQRIAAVGTESRPLLNHE 245

Query: 245 SGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQI 304
           SG+ YTKAFRRLS LLEERG+ Y NAN +V L ++AAKLG  DV +++P  IAIEAL QI
Sbjct: 246 SGDAYTKAFRRLSALLEERGEFYANANTRVSLENIAAKLGYRDVSSISPTAIAIEALEQI 299

Query: 305 QHFVEHEDG 312
            +F+E E+G
Sbjct: 306 GNFLEEEEG 299

[Close]

BLAST of CmoCh07G007790 vs. TAIR10
Match: AT2G21940.4 (AT2G21940.4 shikimate kinase 1)

HSP 1 Score: 303.1 bits (775), Expect = 2.0e-82
Identity = 155/285 (54.39%), Postives = 204/285 (71.58%), Query Frame = 1


Query: 26  GSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTISVGASCYRENISGLALETENFHPFD 85
           GS+R+   +   ++   +  A  QP R +++ R +S   SC   N SG  LET + +PFD
Sbjct: 27  GSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRAVSPAVSCSDNNSSGALLETGSVYPFD 86

Query: 86  KDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELSYAFSDSDTLVEQEVGGT 145
           +D+L K K++EV+P+LNG+ +YLVGMMGSGKTT+GK+++K L Y F D DTL+EQ + GT
Sbjct: 87  EDIL-KRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGT 146

Query: 146 SVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSMHGFVISTGGGIVVRPIN 205
           SVAEIF  +GE+FFR KE               T+ L+KLSS +  V+STGGG V+RPIN
Sbjct: 147 SVAEIFVHHGENFFRGKE---------------TDALKKLSSRYQVVVSTGGGAVIRPIN 206

Query: 206 WKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYTKAFRRLSVLLEERGDAY 265
           WKYM  GISIWLDVPLEALA RIAAVGTDSRPLLH+ESG+ Y+ AF+RLS + +ERG+AY
Sbjct: 207 WKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAY 266

Query: 266 TNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFVEHED 311
           TNAN +V L ++AAK G  +V +LTP +IAIEA  Q+  F+E E+
Sbjct: 267 TNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKEE 295

[Close]

BLAST of CmoCh07G007790 vs. TAIR10
Match: AT4G39540.3 (AT4G39540.3 shikimate kinase 2)

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-70
Identity = 154/305 (50.49%), Postives = 197/305 (64.59%), Query Frame = 1


Query: 20  FARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTISVGASCYRENISGLALETE 79
           F  KP GS+R+     K+ K   VV A     R  +R R++S       +  S   LET 
Sbjct: 20  FEGKPRGSLRYNTQRIKEDKRFRVV-ALTLDKRRDHRLRSVS-------DKNSSALLETG 79

Query: 80  NF--HPFDKDL-LLKNKSQEVQPHLNGKCIYLV--------GMMGSGKTTIGKILAKELS 139
           +    PFD++  +LK K++EV+P+LNG+ +YL+        GMMGSGKTT+GKI+A+ L 
Sbjct: 80  SLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMARSLG 139

Query: 140 YAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSM 199
           Y F D DTL+EQ + GTSVAEIF+ +GE  FR+KE               TE L+KLS M
Sbjct: 140 YTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKE---------------TEALKKLSLM 199

Query: 200 -HGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH-NESGNG 259
            H  V+STGGG V+RPINWKYM  GISIWLDVPLEALA RIAAVGT SRPLLH +ESG+ 
Sbjct: 200 YHQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDT 259

Query: 260 YTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFV 312
           YT A  RLS + + RG+AYT A+ +V L ++  KLG   V +LTP +IAIEA  Q+Q ++
Sbjct: 260 YTAALNRLSTIWDARGEAYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYL 301

[Close]

BLAST of CmoCh07G007790 vs. TAIR10
Match: AT3G26900.1 (AT3G26900.1 shikimate kinase like 1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 89/280 (31.79%), Postives = 133/280 (47.50%), Query Frame = 1


Query: 29  RFLPPISKQQKLPPVVSAFQQPLRLSNRCRTIS-----VGASCYRENISGLALETENFHP 88
           R LP +S Q +     +   +PL  S+  R IS       +    +  +   +   +  P
Sbjct: 18  RLLPLLSPQAR-----TTLCKPLLSSSSTRLISCHSRIAPSRSLADQSASTGISVVDSDP 77

Query: 89  FDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELSYAFSDSDTLVEQEVG 148
            D   ++K K+ ++ P L G  I+LVG+  S KT  GK+LA+ L Y + DSD L+ +  G
Sbjct: 78  ID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAG 137

Query: 149 GTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSMHGFVISTGGGIVVRP 208
           G   A+  K   E  F++                ETEVL++LSSM   V+  G G V   
Sbjct: 138 GNVSAQALKEADEKAFQES---------------ETEVLKQLSSMGRLVVCAGDGAVQSL 197

Query: 209 INWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYTKAFRRLSVLLEERGD 268
            N   +++GISIW+DVPL+  AK     G D     H+E      + F  L    E+   
Sbjct: 198 RNLALLRHGISIWIDVPLDITAK-----GDDDS--FHSEPS---PELFDTLKASYEKSRK 257

Query: 269 AYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQ 304
            Y  A+V + L  +A KL   D+  +T EDIA+E L +I+
Sbjct: 258 GYETADVSISLEKIATKLEFEDLEAVTSEDIALEILKEIE 264

[Close]

BLAST of CmoCh07G007790 vs. NCBI nr
Match: gi|778718035|ref|XP_011657795.1| (PREDICTED: shikimate kinase 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143
Identity = 263/315 (83.49%), Postives = 276/315 (87.62%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           MEVN GHLQ+LSIRID GM  RKPSGSVRFL PIS QQKLP +VSAFQQPLRLSNRCRT+
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVGASCYRENISGLALETENFHPFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIG 120
           SV  SCYRENISGL LETE  HPFDKDLLLKNKSQEVQPHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETE 180
           KILAKEL Y FSDSDTLVEQEVGGTSVA+IFKL+GE FFRDK               ETE
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDK---------------ETE 180

Query: 181 VLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240
           VLRKLS MHGFVISTGGGIVVRPINWKYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLH
Sbjct: 181 VLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240

Query: 241 NESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALV 300
           +ESGN YTKAFRRLSVLLEERGDAY NAN KVCLGSLA KLGLSDVCNLTP DIA+EALV
Sbjct: 241 HESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALV 300

Query: 301 QIQHFVEHEDGYCTS 316
           QIQ+F+E E+ Y T+
Sbjct: 301 QIQNFLEQENDYATT 300

[Close]

BLAST of CmoCh07G007790 vs. NCBI nr
Match: gi|659079230|ref|XP_008440145.1| (PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo])

HSP 1 Score: 502.7 bits (1293), Expect = 4.8e-139
Identity = 255/315 (80.95%), Postives = 272/315 (86.35%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME N GHLQ+LSIRID G   RKPSGSVRFL PIS +QKLP +VSAFQQPLRLSNRCRT+
Sbjct: 1   MEANFGHLQHLSIRIDFGTVVRKPSGSVRFLQPISDRQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVGASCYRENISGLALETENFHPFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIG 120
           SV  SCYRENIS L LETE FHPFDKDLLLKNKSQEV+P LNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISDLTLETEIFHPFDKDLLLKNKSQEVRPLLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETE 180
           KILA+EL Y FSDSDTLVEQ+VGGTSVA+IFKL+GE FFRDK               ETE
Sbjct: 121 KILARELGYTFSDSDTLVEQDVGGTSVADIFKLHGEVFFRDK---------------ETE 180

Query: 181 VLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240
           VL+KLS MHGFVISTGGGIVVRPINWKYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLH
Sbjct: 181 VLKKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLH 240

Query: 241 NESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALV 300
           +ESGN Y KAFRRLSVLLEERGDAY NAN KVCLGSLA KLGLSDVCNLTP DIAIEALV
Sbjct: 241 HESGNAYMKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAIEALV 300

Query: 301 QIQHFVEHEDGYCTS 316
           QI+HF+E +D Y T+
Sbjct: 301 QIRHFLEQKDDYATT 300

[Close]

BLAST of CmoCh07G007790 vs. NCBI nr
Match: gi|645218840|ref|XP_008232698.1| (PREDICTED: shikimate kinase, chloroplastic-like [Prunus mume])

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-91
Identity = 181/313 (57.83%), Postives = 220/313 (70.29%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME  V H    S  IDS   AR+PS S R    + +Q KL  +V+A     R+SNR R +
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPTSRVSNRQRHV 63

Query: 61  SVGASCYRENISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTI 120
           ++  SC         +E+ NF  PFD+ L+LKNK+Q ++P+LNG+CIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICET 180
           GKIL++ ++Y+F DSDTLVE EVGGTSVAEIFKL GE FFRDKE               T
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKE---------------T 183

Query: 181 EVLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLL 240
           EVLRKLS MH  V+STGGG VVRPINWK M+ GIS+WLDVPLEALAKRIAAVGT SRPLL
Sbjct: 184 EVLRKLSLMHRLVVSTGGGAVVRPINWKCMKKGISVWLDVPLEALAKRIAAVGTGSRPLL 243

Query: 241 HNESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEAL 300
           H+ESG+ Y K F RL+ L EERGD+Y NA+ KV L ++AAKLG  DV +LTP  I  E L
Sbjct: 244 HHESGDAYRKTFMRLTSLFEERGDSYANASAKVSLENIAAKLGYRDVSSLTPTAIVFEVL 301

Query: 301 VQIQHFVEHEDGY 313
            QI+ F++ EDG+
Sbjct: 304 EQIEVFLKEEDGH 301

[Close]

BLAST of CmoCh07G007790 vs. NCBI nr
Match: gi|76782196|gb|ABA54868.1| (putative shikimate kinase [Fagus sylvatica])

HSP 1 Score: 343.6 bits (880), Expect = 3.7e-91
Identity = 184/303 (60.73%), Postives = 219/303 (72.28%), Query Frame = 1


Query: 11  LSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSA-FQQPLRLSNRCRTISVGASCYRE 70
           +S RI S  FAR+  GSVR      +Q +LP +VSA  Q   R SN  +T S+  SC  +
Sbjct: 11  VSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKTASLEVSCSYK 70

Query: 71  NISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIGKILAKELS 130
           N     LE+   H PFD  L+LKNKSQE++P+L+G+CIYLVGMMGSGKTT+GK+L++ LS
Sbjct: 71  NFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLS 130

Query: 131 YAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICETEVLRKLSSM 190
           YAF DSDTLVEQ+V   SVAEIF LYGE FFRDKE               TEVLRKLS M
Sbjct: 131 YAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKE---------------TEVLRKLSLM 190

Query: 191 HGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYT 250
           H  V+STGGG VVRPINWKYMQ GIS+WLDVPLEALA+RIAAVGT SRPLLH++SG+ YT
Sbjct: 191 HRLVVSTGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYT 250

Query: 251 KAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEALVQIQHFVEH 310
           K F RL+ L+EER +AY NAN +V L  +AAKLG  DV NLTP  IAIEAL QI+ F++ 
Sbjct: 251 KTFMRLTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKE 298

Query: 311 EDG 312
           E+G
Sbjct: 311 ENG 298

[Close]

BLAST of CmoCh07G007790 vs. NCBI nr
Match: gi|595826746|ref|XP_007205622.1| (hypothetical protein PRUPE_ppa009120mg [Prunus persica])

HSP 1 Score: 342.0 bits (876), Expect = 1.1e-90
Identity = 179/313 (57.19%), Postives = 221/313 (70.61%), Query Frame = 1


Query: 1   MEVNVGHLQNLSIRIDSGMFARKPSGSVRFLPPISKQQKLPPVVSAFQQPLRLSNRCRTI 60
           ME  V H    S  IDS   AR+PS S R    + +Q KL  +V+A     R+SNR R +
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPSSRVSNRQRHV 63

Query: 61  SVGASCYRENISGLALETENFH-PFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTI 120
           ++  SC         +E+ NF  PFD+ L+LKNK+Q ++P+LNG+CIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKEVSDGGCHMTILSICET 180
           GKIL++ ++Y+F DSDTLVE EVGGTSVAEIFKL GE FFRDKE               T
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKE---------------T 183

Query: 181 EVLRKLSSMHGFVISTGGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLL 240
           EVLRKLS MH  V+STGGG VVRPINWK M+ GIS+WLDVPLEALA+RIAAVGT SRPLL
Sbjct: 184 EVLRKLSLMHHLVVSTGGGAVVRPINWKCMKKGISVWLDVPLEALAQRIAAVGTGSRPLL 243

Query: 241 HNESGNGYTKAFRRLSVLLEERGDAYTNANVKVCLGSLAAKLGLSDVCNLTPEDIAIEAL 300
           H+ESG+ Y K F RL+ L E+RGD+Y NA+ +V L ++AAKLG  DV +LTP  I IE L
Sbjct: 244 HHESGDAYRKTFMRLTSLFEQRGDSYANASARVSLENIAAKLGYRDVSSLTPTAIVIEVL 301

Query: 301 VQIQHFVEHEDGY 313
            QI+ F++ EDG+
Sbjct: 304 EQIEVFLKEEDGH 301

The following BLAST results are available for this feature:

BLAST of CmoCh07G007790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SK1_ARATH	8.5e-80	54.39	Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1 PE=1 SV=2	[more]
SK_SOLLC	1.7e-75	48.70	Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1 SV=1	[more]
SK2_ARATH	1.5e-71	52.19	Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2 PE=1 SV=1	[more]
SK3_ORYSJ	1.2e-68	49.66	Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV...	[more]
SK2_ORYSJ	2.8e-67	60.00	Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=SK2 PE=1 SV...	[more]

BLAST of CmoCh07G007790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFZ0_CUCSA	7.6e-144	83.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487590 PE=3 SV=1	[more]
Q30CZ9_FAGSY	2.6e-91	60.73	Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1	[more]
M5W0C8_PRUPE	7.5e-91	57.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009120mg PE=3 SV=1	[more]
V4S1P4_9ROSI	2.1e-85	56.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026159mg PE=3 SV=1	[more]
A0A067KSL7_JATCU	1.0e-84	55.66	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09404 PE=3 SV=1	[more]

BLAST of CmoCh07G007790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21940.4	2.0e-82	54.39	shikimate kinase 1	[more]
AT4G39540.3	2.9e-70	50.49	shikimate kinase 2	[more]
AT3G26900.1	1.4e-27	31.79	shikimate kinase like 1	[more]

BLAST of CmoCh07G007790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778718035\|ref\|XP_011657795.1\|	1.1e-143	83.49	PREDICTED: shikimate kinase 1, chloroplastic [Cucumis sativus]	[more]
gi\|659079230\|ref\|XP_008440145.1\|	4.8e-139	80.95	PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo]	[more]
gi\|645218840\|ref\|XP_008232698.1\|	2.2e-91	57.83	PREDICTED: shikimate kinase, chloroplastic-like [Prunus mume]	[more]
gi\|76782196\|gb\|ABA54868.1\|	3.7e-91	60.73	putative shikimate kinase [Fagus sylvatica]	[more]
gi\|595826746\|ref\|XP_007205622.1\|	1.1e-90	57.19	hypothetical protein PRUPE_ppa009120mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000623	Shikimate_kinase/TSH1
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0004765	shikimate kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G007790.1	CmoCh07G007790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 103..303 score: 23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 102..303 score: 6.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 104..257 score: 2.64
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 106..121 score: 1.4E-9coord: 130..143 score: 1.
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 179..311 score: 1.6E-130coord: 49..163 score: 1.6E
None	No IPR available	PANTHER	PTHR21087:SF8	SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED	coord: 49..163 score: 1.6E-130coord: 179..311 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G007790	Cucsa.101660	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G007790	CmaCh03G010380	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G007790	CmaCh07G007570	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G007790	Cla008501	Watermelon (97103) v1	cmowmB814
CmoCh07G007790	Csa6G487590	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G007790	MELO3C007485	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G007790	ClCG01G016150	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G007790	CSPI06G27300	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G007790	Lsi01G010590	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G007790	Cp4.1LG10g03150	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G007790	Cp4.1LG19g11760	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G007790	MELO3C007485.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G007790	CsaV3_6G042420	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G007790	Cla97C01G015150	Watermelon (97103) v2	cmowmbB849
CmoCh07G007790	Bhi03G001536	Wax gourd	cmowgoB1053
CmoCh07G007790	CsGy6G026670	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G007790	Carg05266	Silver-seed gourd	carcmoB1100
CmoCh07G007790	Carg00896	Silver-seed gourd	carcmoB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G007790	CmoCh03G010380	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:

None