CSPI06G27300 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G27300
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Shikimate kinase
Location	Chr6 : 24013409 .. 24017175 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTAAACTTTGGACATTTGCAGCATTTATCAATCCGGATTGATTTCGGAATGGTTGTGAGGAAACCGAGTGGTTCGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCGGGGCTTGTTTCGGCTTTTCAGCAACCTCTGAGACTTTCGAATCGATGCAGGACGGTCTCTGTGGAGACTTCCTGTTATCGTGAGAATATTTCAGGTAGCGTGAGATTTTGGAGTTCTAGTGTGATATAAGAAATGTGAGAGTATACTCTATTGCTTTTCTTGGCGGAACTTCATTTATAGTGGGAACTTCTGATCTGTTTCATATTTTATTTTATTTTTTTAGGAGTAGTACTAGTATTTGGATTGGTGAAGTCCTTTGCGTCCATTTTCTGACCTGAATTAATTTGTATTTCTCTGATTAATCATAATCATATAGTATGGATGCGCGAACTAAACAGTATAATTGAACAACTTGTCTGAAGCAGTCTAATTCTACATCTATCATGCTATGTTATCATCATTTTTTTTTCTTCTGAAGTTTCAATAGAACCTTTCACATTATCATGACATCAACATCCCTCATGCTTACTGCACTATAATCACATTTAATTGGTAACATGATGGAAATGGTTTGAAAAATGAATTTGATATCATGCTCAGAAATTTGTGTGGCTTCTTTTCGATGCAATTGGTCCCCCTAGATCAAAAATTCACATTGTCCCCTTCCTAAGTGGAAATGACCAGTGTTATCCCTTGGTTTTGGCCAACGAATTAAGAATTATGTAAACAAAAGCAACAAAATGCATCTCAGCAACCGATCCTCCTTGTAATTATACTTCTTACTTAATAGGCCTCTGAGTGAGTAAGTACTTTATTTAGATGTTATCTGTTGGATTTTTGAGTGCCTTCAAATCTTTAAGGGAGAAGTGCTATGCTGAGCGGATACACATTCTTTCACATTATCACGTACGATACCAGTAGTGACTTTGTTGCCATTTGAAAGGCTGAGAGCCCAGAACATGCTTTTTGTGATTGTCATGCATGATGATCGATGAATGATTTGTCTTCCTCTTTATTGTCTACAGCTTGCAAGTAACCAGTTGATCTTTGGCTTATGCTTTTCAATATTCCTTTCGTAGGTTTGACATTGGAAACTGAAAAATCTCATCCCTTCGACAAAGATCTACTTTTAAAGGTCAAGCAGAATTCTTGTTATATGTTTACACCTTCAGTAGCGTTGTGGTAACGTGGAATATGAGCTTTTCTTTCTGATTCATGGAATATACTCTTCTCTCTCTCAAATAGCTTCAAACCATAATAGATGAGATTTGAAAGGATCTTTGTTGTGCAAGTTTGAAAGTTTATCTAACTAGAATTTGGAAAAATGTGCAGAACAAGTCACAAGAGGTCCAGCCCCATCTAAATGGACGATGCATATATTTAGTTGGTTAGTGTCTTTTCTCTTTTACGCTTTATAATTGGAATTCTTGTGCTTGGATACTATACTAAATCTATCTAAATGCTGATTTCCAGGAATGATGGGCTCTGGAAAGACAACCATAGGCAAGATTCTAGCGAAAGAATTGGGTTACACATTCTCTGACAGGTTTGTTATTTAATTGCTAGCTATCAAAAAACATTGAATAACATATTGGAAGAAAAATTGTTGCACAATTTCATCATCACATCATTATTCCAGCATACAAGGTCTATTACAAATCTGGACTGCGTTGGAACAACAGTTTTGAAGTGATACTACATGCAATATATGTTTTTTTTATTCTATGCTATTTTATAGGAAATTAGGCATTCATAATTTGCGTCCCTTTTGAGCACAAATGAGTTATTAACCCAAGTTTTTTGTGAGCTTCCTTTCCTATTAATTATGCATCACATATTCAGCGATACATTGGTGGAGCAAGAAGTTGGTGGAACATCAGTGGCTGACATTTTCAAGCTTCACGGCGAGGTTTTTTTCAGGGATAAGGAGGTTAGTGTTACGAGGACATTACTATCTACTGTATTTGATGTTTTTACGAACCAAGTACAATGTGGGAAGTACAGTGCATCATGACAATTTTCCTTGGAGTGAATATTTTAACTCTTGAGATGTTTTAAGGGGCAGATGTGACCATGCGATTTTCCTTCCTCTTTTATAGGAATTGAAAAGGTTCTGGATTTATAATTAGGAATGCTCAAAAGGCCGAATGTTTTTTTTTTCAGTTAGGCTGAGTTGAAAAGTTTTATGGATTGGTTTTACTACATATAGATTAACCCCTGTAGATTGCTTTAGTTCATGAGTACTAAACTTAGTTTGGATTGGACCAAATGTATCCAAGTTCAAGTTCATATAATGTATGGTAGATTGGGTTGAGTTTGGTCTGTTAATTTAATTCAAGGTTATTTGGGGTGGACAAATCTTGTCACCTTTGAACTTTTGAGTCTGGTCTAAAATGTCATTGAATTAAGTCCCTCAACCCAGCCCACTACCACCCTTTCATAGTAGTGATCTGTTTTGTGTCTTCCAATTATTAATATATTGGGCCTATTCGTCGAGTAATATCAAGTATGATTGTTTATTTTACTACGTTTAGTCATGGACTTTTAACCATCAATGGATGGTTGATATTTTAAAAAATATTCGAAAGTTATGCTGATTTTTTAAACATGATGCTTCTTAGCCTTTCTTGCCACCATCTCTACCTAGTTACTATTGCTGTCTTATTTCCCTGTCTAGCTGCCATGGTTTCAAGCAGCTAAGTAAAATGTTTTGCAACTCTGAGCTGTTATAACAGATCAAAGTTAAGTGACAGTGGTTTTCCTGTTAGACTGAGGTATTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGAGGAGGTATTGTTGTTCGTCCTATTAACTGGTAATTTGTTTGGACACTGACACTTTCTAATTGTTTTATAGTTTTATCTATTTTTGTTAAGTGAGAGTCTTCCGATTTGATTGTAGGAAATATATGCGCAATGGGATTAGCATCTGGCTAGATGTTCCATTGGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGATTCTCGCCCCCTCTTGCACCACGAGTCAGGCAATGCCTACACGAAGGTGGTGAATCGTTCTCCATGAGGAAACATTTATCCATAAACTACCCACTTTTCTTTATTTAAAGCTTTATTGCTTATTCAGTTGTTAACTCATCATCCTTAATCCTAATACATCTTTTAATCTGCCGATTCTCGCTCAGGCTTTCAGGCGATTGTCGGTCCTTCTTGAGGAAAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTATGAAATATAGAAATCTTGACATCCTTTGTCTTTCTGGAAACATTGAACCTAAATAAGGCTTCATTACACGATCTCTTCTCTTTCTTCTTCTTTCACACCCAAACTGCCAATGTCACAATATTTATCGTTAAAACCTAAAATCAAGTTTTCTTTTTCTCAACTTGCAGGTCTTGCTGACAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCCGCAGATATTGCTGTAGAGGTTCCCTTTCTGTCTCATCTATTGTTCTTTGCTAAATTCGATTGAAAAGAGATAACCTTGTAAACTTGGAGTCCTTTTCAAAATTTGTTTTTTAACACTGATTGATTTTGAAGTTTATTCTTTTCAGGCGCTTGTACAAATTCAGAACTTCCTAGAACAGGAAAATGATTACGCTACAACTTAA

mRNA sequence

ATGGAGGTAAACTTTGGACATTTGCAGCATTTATCAATCCGGATTGATTTCGGAATGGTTGTGAGGAAACCGAGTGGTTCGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCGGGGCTTGTTTCGGCTTTTCAGCAACCTCTGAGACTTTCGAATCGATGCAGGACGGTCTCTGTGGAGACTTCCTGTTATCGTGAGAATATTTCAGGTTTGACATTGGAAACTGAAAAATCTCATCCCTTCGACAAAGATCTACTTTTAAAGAACAAGTCACAAGAGGTCCAGCCCCATCTAAATGGACGATGCATATATTTAGTTGGAATGATGGGCTCTGGAAAGACAACCATAGGCAAGATTCTAGCGAAAGAATTGGGTTACACATTCTCTGACAGCGATACATTGGTGGAGCAAGAAGTTGGTGGAACATCAGTGGCTGACATTTTCAAGCTTCACGGCGAGGTTTTTTTCAGGGATAAGGAGACTGAGGTATTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGAGGAGGTATTGTTGTTCGTCCTATTAACTGGAAATATATGCGCAATGGGATTAGCATCTGGCTAGATGTTCCATTGGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGATTCTCGCCCCCTCTTGCACCACGAGTCAGGCAATGCCTACACGAAGGCTTTCAGGCGATTGTCGGTCCTTCTTGAGGAAAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTCTTGCTGACAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCCGCAGATATTGCTGTAGAGGCGCTTGTACAAATTCAGAACTTCCTAGAACAGGAAAATGATTACGCTACAACTTAA

Coding sequence (CDS)

ATGGAGGTAAACTTTGGACATTTGCAGCATTTATCAATCCGGATTGATTTCGGAATGGTTGTGAGGAAACCGAGTGGTTCGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCGGGGCTTGTTTCGGCTTTTCAGCAACCTCTGAGACTTTCGAATCGATGCAGGACGGTCTCTGTGGAGACTTCCTGTTATCGTGAGAATATTTCAGGTTTGACATTGGAAACTGAAAAATCTCATCCCTTCGACAAAGATCTACTTTTAAAGAACAAGTCACAAGAGGTCCAGCCCCATCTAAATGGACGATGCATATATTTAGTTGGAATGATGGGCTCTGGAAAGACAACCATAGGCAAGATTCTAGCGAAAGAATTGGGTTACACATTCTCTGACAGCGATACATTGGTGGAGCAAGAAGTTGGTGGAACATCAGTGGCTGACATTTTCAAGCTTCACGGCGAGGTTTTTTTCAGGGATAAGGAGACTGAGGTATTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGAGGAGGTATTGTTGTTCGTCCTATTAACTGGAAATATATGCGCAATGGGATTAGCATCTGGCTAGATGTTCCATTGGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGATTCTCGCCCCCTCTTGCACCACGAGTCAGGCAATGCCTACACGAAGGCTTTCAGGCGATTGTCGGTCCTTCTTGAGGAAAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTCTTGCTGACAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCCGCAGATATTGCTGTAGAGGCGCTTGTACAAATTCAGAACTTCCTAGAACAGGAAAATGATTACGCTACAACTTAA

Homology

[Close]

BLAST of CSPI06G27300 vs. Swiss-Prot
Match: SK1_ARATH (Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1 PE=1 SV=2)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-85
Identity = 165/281 (58.72%), Postives = 210/281 (74.73%), Query Frame = 1


Query: 15  IDFGMVVRKPS-GSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVETSCYRENISG 74
           +D   V  KP  GS+R+ Q +   ++  GL  A  QP R +++ R VS   SC   N S 
Sbjct: 15  VDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRAVSPAVSCSDNNSSA 74

Query: 75  LTLETEKSHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSD 134
           L LET   +PFD+D +LK K++EV+P+LNGR +YLVGMMGSGKTT+GK+++K LGYTF D
Sbjct: 75  L-LETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFD 134

Query: 135 SDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKY 194
            DTL+EQ + GTSVA+IF  HGE FFR KET+ L+KLS  +  V+STGGG V+RPINWKY
Sbjct: 135 CDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKY 194

Query: 195 MRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANA 254
           M  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+ AF+RLS + +ERG+AY NA
Sbjct: 195 MHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNA 254

Query: 255 NAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQE 295
           NA+V L ++A K G  +V +LTP +IA+EA  Q+ +FLE+E
Sbjct: 255 NARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293

[Close]

BLAST of CSPI06G27300 vs. Swiss-Prot
Match: SK_SOLLC (Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-81
Identity = 157/295 (53.22%), Postives = 209/295 (70.85%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME        LS  I+   VVRKPSG +RF +  +++ +   +VS   QP + ++  R V
Sbjct: 1   MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 61  SVETSCYRENISGLTLETEK-SHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTI 120
            ++ SC  +N+    LE+   S   D+   LKNK++EV+ +L+GRC+YLVGMMG GKTT+
Sbjct: 61  QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 121 GKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           G+ILA+ LGY+F D D L+EQ VGG +VA+IF+L GE FFRD ETEVL KLSLMH  V+S
Sbjct: 121 GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVS 180

Query: 181 TGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRL 240
           TGGG VVRPINW++M  GIS+WLDVPLEALAKRI   GT SRPLLH ESG+ Y    +RL
Sbjct: 181 TGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRL 240

Query: 241 SVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQE 295
           + L+E RG+ YANA+A+V L ++A K    DVC++TPA+I +E L+QI+NFL+ +
Sbjct: 241 TTLMETRGENYANASARVSLENIALKRE-KDVCHITPAEITLEVLIQIENFLKTQ 294

[Close]

BLAST of CSPI06G27300 vs. Swiss-Prot
Match: SK2_ARATH (Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-74
Identity = 157/282 (55.67%), Postives = 200/282 (70.92%), Query Frame = 1


Query: 23  KPSGSVRF-LQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVETSCYRENISGLTLETEK- 82
           KP GS+R+  Q I + ++    V A     R  +R R+VS       +  S   LET   
Sbjct: 23  KPRGSLRYNTQRIKEDKRFR--VVALTLDKRRDHRLRSVS-------DKNSSALLETGSL 82

Query: 83  -SHPFDKDL-LLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLV 142
              PFD++  +LK K++EV+P+LNGR +YLVGMMGSGKTT+GKI+A+ LGYTF D DTL+
Sbjct: 83  LHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLI 142

Query: 143 EQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLM-HGFVISTGGGIVVRPINWKYMRNG 202
           EQ + GTSVA+IF+  GE  FR+KETE L+KLSLM H  V+STGGG V+RPINWKYM  G
Sbjct: 143 EQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPINWKYMHKG 202

Query: 203 ISIWLDVPLEALAKRIAAVGTDSRPLLH-HESGNAYTKAFRRLSVLLEERGDAYANANAK 262
           ISIWLDVPLEALA RIAAVGT SRPLLH  ESG+ YT A  RLS + + RG+AY  A+A+
Sbjct: 203 ISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTKASAR 262

Query: 263 VCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
           V L ++  KLG   V +LTPA+IA+EA  Q+Q++LE+E+  A
Sbjct: 263 VSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 295

[Close]

BLAST of CSPI06G27300 vs. Swiss-Prot
Match: SK3_ORYSJ (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV=2)

HSP 1 Score: 276.2 bits (705), Expect = 4.3e-73
Identity = 143/253 (56.52%), Postives = 192/253 (75.89%), Query Frame = 1


Query: 44  VSAFQQPLRLSNRCRT--VSVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHL 103
           V  F QPL L +  R+    ++ SC R+  +G+    +  +  D+ L+LK K+++V P+L
Sbjct: 34  VEKFAQPLVLGSDRRSCGAKLKVSCSRKP-AGID---KTYYSADEALVLKQKAEDVVPYL 93

Query: 104 NGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRD 163
           N RCIYLVGMMGSGKTT+GKILA+ LGY+F DSD LVE+ VG +SVA+IF+LH E FFRD
Sbjct: 94  NDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRD 153

Query: 164 KETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSR 223
            E+EVLR LS MH  V++TGGG V+RPINW YM+ G +IWLDVPL+ALA+RIAAVGT SR
Sbjct: 154 NESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASR 213

Query: 224 PLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAV 283
           PLLH ESG+ Y KA+ +L+ L E+R D+YANA+A+V L  +A K G S+V  LTP+ IA+
Sbjct: 214 PLLHQESGDPYAKAYAKLTALFEQRMDSYANADARVSLEHIAVKQGHSNVTTLTPSAIAI 273

Query: 284 EALVQIQNFLEQE 295
           EAL+++++FL ++
Sbjct: 274 EALLKMESFLTEK 282

[Close]

BLAST of CSPI06G27300 vs. Swiss-Prot
Match: SK2_ORYSJ (Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=SK2 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-71
Identity = 134/211 (63.51%), Postives = 165/211 (78.20%), Query Frame = 1


Query: 85  DKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQEVGG 144
           D+ LLLK KS+EV  +LNGRCIYLVGMMGSGK+T+ KILA+ LGY+F DSD LVEQ VG 
Sbjct: 76  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135

Query: 145 TSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISIWLDV 204
            SVA IFK H E FFRD E+ VLR LS M   V++TGGG V+RP+NWKYM+ G+S+WLDV
Sbjct: 136 PSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 195

Query: 205 PLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLGSLAD 264
           PL+ALA+RIA VGT SRPLL   S + YT AF +LS+L E+RGDAYANA+A+V L  +A 
Sbjct: 196 PLDALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAA 255

Query: 265 KLGLSDVCNLTPADIAVEALVQIQNFLEQEN 296
           K G  DV  LTP DIA+EAL++I+NF+ + +
Sbjct: 256 KQGHDDVSKLTPTDIAIEALLKIENFVTEHS 286

[Close]

BLAST of CSPI06G27300 vs. TrEMBL
Match: A0A0A0KFZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487590 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.2e-168
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIG 120
           SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS 240
           GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS 240

Query: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT 300
           VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT
Sbjct: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT 300

[Close]

BLAST of CSPI06G27300 vs. TrEMBL
Match: M5W0C8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009120mg PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 183/299 (61.20%), Postives = 224/299 (74.92%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME    H    S  ID   V R+PS S R  Q + +Q KL  LV+A     R+SNR R V
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPSSRVSNRQRHV 63

Query: 61  SVETSCYRENISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTI 120
           ++E SC        T+E+     PFD+ L+LKNK+Q ++P+LNGRCIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GKIL++ + Y+F DSDTLVE EVGGTSVA+IFKL+GE FFRDKETEVLRKLSLMH  V+S
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKETEVLRKLSLMHHLVVS 183

Query: 181 TGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRL 240
           TGGG VVRPINWK M+ GIS+WLDVPLEALA+RIAAVGT SRPLLHHESG+AY K F RL
Sbjct: 184 TGGGAVVRPINWKCMKKGISVWLDVPLEALAQRIAAVGTGSRPLLHHESGDAYRKTFMRL 243

Query: 241 SVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
           + L E+RGD+YANA+A+V L ++A KLG  DV +LTP  I +E L QI+ FL++E+ +A
Sbjct: 244 TSLFEQRGDSYANASARVSLENIAAKLGYRDVSSLTPTAIVIEVLEQIEVFLKEEDGHA 302

[Close]

BLAST of CSPI06G27300 vs. TrEMBL
Match: Q30CZ9_FAGSY (Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 6.9e-94
Identity = 185/291 (63.57%), Postives = 222/291 (76.29%), Query Frame = 1


Query: 11  LSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSA-FQQPLRLSNRCRTVSVETSCYRE 70
           +S RI      R+  GSVR  +   +Q +LP LVSA  Q   R SN  +T S+E SC  +
Sbjct: 11  VSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKTASLEVSCSYK 70

Query: 71  NISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELG 130
           N     LE+   H PFD  L+LKNKSQE++P+L+GRCIYLVGMMGSGKTT+GK+L++ L 
Sbjct: 71  NFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLS 130

Query: 131 YTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRP 190
           Y F DSDTLVEQ+V   SVA+IF L+GE FFRDKETEVLRKLSLMH  V+STGGG VVRP
Sbjct: 131 YAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVVSTGGGAVVRP 190

Query: 191 INWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGD 250
           INWKYM+ GIS+WLDVPLEALA+RIAAVGT SRPLLHH+SG+AYTK F RL+ L+EER +
Sbjct: 191 INWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMRLTSLMEERSE 250

Query: 251 AYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQEN-DYA 299
           AYANANA+V L  +A KLG  DV NLTP  IA+EAL QI+ FL++EN D+A
Sbjct: 251 AYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEENGDFA 301

[Close]

BLAST of CSPI06G27300 vs. TrEMBL
Match: A0A067KSL7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09404 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.9e-90
Identity = 181/302 (59.93%), Postives = 229/302 (75.83%), Query Frame = 1


Query: 1   MEVNF-GHLQHLSIRIDFGMVVRK-PSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCR 60
           M+V F G +Q  S  ID G V  K P+GS+R  + + ++Q+L    SA  Q     NR  
Sbjct: 1   MDVKFVGRMQLSSTWIDCGRVTPKLPTGSLRLSRKLKEKQRLQVGFSADIQSTTNKNRHG 60

Query: 61  TVSVETSCYRENISGLTLETEKSHPF--DKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGK 120
           +VS + SC  +N     LE+  S P   D+ L+LK+KSQEV P++NGRCIYLVGMMGSGK
Sbjct: 61  SVSFKVSCSYQNFPASVLESG-SLPVSSDESLILKHKSQEVGPYINGRCIYLVGMMGSGK 120

Query: 121 TTIGKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGF 180
           TT+GK+L++ L Y+F D DTL+E+EV G SVA+IFKL+GE +FR+KETEVL+KLS+MH  
Sbjct: 121 TTVGKVLSQVLAYSFCDCDTLIEEEVQGISVAEIFKLYGEGYFRNKETEVLKKLSMMHHV 180

Query: 181 VISTGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAF 240
           V+STGGG VVRPINW++MR GIS+WLDVPLEALA+RIAAVGT+SRPLL+HESG+AYTKAF
Sbjct: 181 VVSTGGGAVVRPINWQHMRKGISVWLDVPLEALAQRIAAVGTESRPLLNHESGDAYTKAF 240

Query: 241 RRLSVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQEND 299
           RRLS LLEERG+ YANAN +V L ++A KLG  DV +++P  IA+EAL QI NFLE+E  
Sbjct: 241 RRLSALLEERGEFYANANTRVSLENIAAKLGYRDVSSISPTAIAIEALEQIGNFLEEEEG 300

[Close]

BLAST of CSPI06G27300 vs. TrEMBL
Match: V4S1P4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026159mg PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.8e-89
Identity = 175/279 (62.72%), Postives = 219/279 (78.49%), Query Frame = 1


Query: 22  RKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVETSCYRENISGLTLETEKS 81
           RK SGSVRF + + ++++L  L+SA  +P   S +    SV+ SC   ++S   LE+   
Sbjct: 22  RKSSGSVRFSRRMREEKRLRVLISAQMEPNVASKQRSYDSVKVSCTFNSLSASVLESGNV 81

Query: 82  H-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQ 141
           H P D+  +LKNKSQE++P+L+GRCIYLVGMMGSGKTT+GKIL+  LGY+F D DTL+EQ
Sbjct: 82  HAPIDEAQVLKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKILSGVLGYSFFDCDTLIEQ 141

Query: 142 EVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISI 201
            V GTSVA+IFKL+GE FFR+KETEVL+KLSLM   V+STGGG V RPINW+YM+ GIS+
Sbjct: 142 SVDGTSVAEIFKLYGEGFFREKETEVLQKLSLMRQLVVSTGGGAVTRPINWRYMQKGISV 201

Query: 202 WLDVPLEALAKRIAAVGTDSRPLLHH-ESGNAYTKAFRRLSVLLEERGDAYANANAKVCL 261
           WLDVPLEALA+RIAAVGTDSRPLLH  ESG+AYT+A  RLS L EERG+AYANANA+V L
Sbjct: 202 WLDVPLEALAQRIAAVGTDSRPLLHQCESGDAYTEALNRLSTLWEERGEAYANANARVSL 261

Query: 262 GSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
            ++A KLG  DV +LTP  IA+EAL QI+ FL++E+D A
Sbjct: 262 ENIAVKLGHKDVSSLTPVTIAIEALEQIEGFLKEEDDMA 300

[Close]

BLAST of CSPI06G27300 vs. TAIR10
Match: AT2G21940.4 (AT2G21940.4 shikimate kinase 1)

HSP 1 Score: 321.2 bits (822), Expect = 6.6e-88
Identity = 165/281 (58.72%), Postives = 210/281 (74.73%), Query Frame = 1


Query: 15  IDFGMVVRKPS-GSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVETSCYRENISG 74
           +D   V  KP  GS+R+ Q +   ++  GL  A  QP R +++ R VS   SC   N SG
Sbjct: 15  VDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRAVSPAVSCSDNNSSG 74

Query: 75  LTLETEKSHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSD 134
             LET   +PFD+D +LK K++EV+P+LNGR +YLVGMMGSGKTT+GK+++K LGYTF D
Sbjct: 75  ALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFD 134

Query: 135 SDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKY 194
            DTL+EQ + GTSVA+IF  HGE FFR KET+ L+KLS  +  V+STGGG V+RPINWKY
Sbjct: 135 CDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKY 194

Query: 195 MRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANA 254
           M  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+ AF+RLS + +ERG+AY NA
Sbjct: 195 MHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNA 254

Query: 255 NAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQE 295
           NA+V L ++A K G  +V +LTP +IA+EA  Q+ +FLE+E
Sbjct: 255 NARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 294

[Close]

BLAST of CSPI06G27300 vs. TAIR10
Match: AT4G39540.3 (AT4G39540.3 shikimate kinase 2)

HSP 1 Score: 271.6 bits (693), Expect = 6.0e-73
Identity = 156/290 (53.79%), Postives = 200/290 (68.97%), Query Frame = 1


Query: 23  KPSGSVRF-LQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVETSCYRENISGLTLETEK- 82
           KP GS+R+  Q I + ++    V A     R  +R R+VS       +  S   LET   
Sbjct: 23  KPRGSLRYNTQRIKEDKRFR--VVALTLDKRRDHRLRSVS-------DKNSSALLETGSL 82

Query: 83  -SHPFDKDL-LLKNKSQEVQPHLNGRCIYLV--------GMMGSGKTTIGKILAKELGYT 142
              PFD++  +LK K++EV+P+LNGR +YL+        GMMGSGKTT+GKI+A+ LGYT
Sbjct: 83  LHSPFDEEQQILKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMARSLGYT 142

Query: 143 FSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLM-HGFVISTGGGIVVRPI 202
           F D DTL+EQ + GTSVA+IF+  GE  FR+KETE L+KLSLM H  V+STGGG V+RPI
Sbjct: 143 FFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGGGAVIRPI 202

Query: 203 NWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLH-HESGNAYTKAFRRLSVLLEERGD 262
           NWKYM  GISIWLDVPLEALA RIAAVGT SRPLLH  ESG+ YT A  RLS + + RG+
Sbjct: 203 NWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGE 262

Query: 263 AYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
           AY  A+A+V L ++  KLG   V +LTPA+IA+EA  Q+Q++LE+E+  A
Sbjct: 263 AYTKASARVSLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEKEDGMA 303

[Close]

BLAST of CSPI06G27300 vs. TAIR10
Match: AT3G26900.1 (AT3G26900.1 shikimate kinase like 1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 77/208 (37.02%), Postives = 108/208 (51.92%), Query Frame = 1


Query: 81  SHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDTLVEQ 140
           S P D   ++K K+ ++ P L G  I+LVG+  S KT  GK+LA+ L Y + DSD L+ +
Sbjct: 70  SDPID---VVKRKAMDIAPELKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITE 129

Query: 141 EVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRPINWKYMRNGISI 200
             GG   A   K   E  F++ ETEVL++LS M   V+  G G V    N   +R+GISI
Sbjct: 130 AAGGNVSAQALKEADEKAFQESETEVLKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISI 189

Query: 201 WLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGDAYANANAKVCLG 260
           W+DVPL+  AK     G D     H E      + F  L    E+    Y  A+  + L 
Sbjct: 190 WIDVPLDITAK-----GDDDS--FHSEPS---PELFDTLKASYEKSRKGYETADVSISLE 249

Query: 261 SLADKLGLSDVCNLTPADIAVEALVQIQ 289
            +A KL   D+  +T  DIA+E L +I+
Sbjct: 250 KIATKLEFEDLEAVTSEDIALEILKEIE 264

[Close]

BLAST of CSPI06G27300 vs. NCBI nr
Match: gi|778718035|ref|XP_011657795.1| (PREDICTED: shikimate kinase 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 6.1e-168
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIG 120
           SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS 240
           GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS 240

Query: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT 300
           VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT
Sbjct: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT 300

[Close]

BLAST of CSPI06G27300 vs. NCBI nr
Match: gi|659079230|ref|XP_008440145.1| (PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158
Identity = 283/300 (94.33%), Postives = 293/300 (97.67%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME NFGHLQHLSIRIDFG VVRKPSGSVRFLQPISD+QKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEANFGHLQHLSIRIDFGTVVRKPSGSVRFLQPISDRQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIG 120
           SVETSCYRENIS LTLETE  HPFDKDLLLKNKSQEV+P LNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISDLTLETEIFHPFDKDLLLKNKSQEVRPLLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILA+ELGYTFSDSDTLVEQ+VGGTSVADIFKLHGEVFFRDKETEVL+KLSLMHGFVIST
Sbjct: 121 KILARELGYTFSDSDTLVEQDVGGTSVADIFKLHGEVFFRDKETEVLKKLSLMHGFVIST 180

Query: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLS 240
           GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAY KAFRRLS
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYMKAFRRLS 240

Query: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYATT 300
           VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIA+EALVQI++FLEQ++DYATT
Sbjct: 241 VLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAIEALVQIRHFLEQKDDYATT 300

[Close]

BLAST of CSPI06G27300 vs. NCBI nr
Match: gi|645218840|ref|XP_008232698.1| (PREDICTED: shikimate kinase, chloroplastic-like [Prunus mume])

HSP 1 Score: 358.6 bits (919), Expect = 1.1e-95
Identity = 186/299 (62.21%), Postives = 223/299 (74.58%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME    H    S  ID   V R+PS S R  Q + +Q KL  LV+A     R+SNR R V
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPTSRVSNRQRHV 63

Query: 61  SVETSCYRENISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTI 120
           ++E SC        T+E+     PFD+ L+LKNK+Q ++P+LNGRCIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GKIL++ + Y+F DSDTLVE EVGGTSVA+IFKL+GE FFRDKETEVLRKLSLMH  V+S
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKETEVLRKLSLMHRLVVS 183

Query: 181 TGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRL 240
           TGGG VVRPINWK M+ GIS+WLDVPLEALAKRIAAVGT SRPLLHHESG+AY K F RL
Sbjct: 184 TGGGAVVRPINWKCMKKGISVWLDVPLEALAKRIAAVGTGSRPLLHHESGDAYRKTFMRL 243

Query: 241 SVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
           + L EERGD+YANA+AKV L ++A KLG  DV +LTP  I  E L QI+ FL++E+ +A
Sbjct: 244 TSLFEERGDSYANASAKVSLENIAAKLGYRDVSSLTPTAIVFEVLEQIEVFLKEEDGHA 302

[Close]

BLAST of CSPI06G27300 vs. NCBI nr
Match: gi|595826746|ref|XP_007205622.1| (hypothetical protein PRUPE_ppa009120mg [Prunus persica])

HSP 1 Score: 356.3 bits (913), Expect = 5.3e-95
Identity = 183/299 (61.20%), Postives = 224/299 (74.92%), Query Frame = 1


Query: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME    H    S  ID   V R+PS S R  Q + +Q KL  LV+A     R+SNR R V
Sbjct: 4   MEATVAHRLQFSTWIDSEKVARRPSSSARCSQRLKEQNKLRVLVAAHLPSSRVSNRQRHV 63

Query: 61  SVETSCYRENISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTI 120
           ++E SC        T+E+     PFD+ L+LKNK+Q ++P+LNGRCIYLVGMMGSGKTT+
Sbjct: 64  ALEVSCSYNKFPASTVESGNFQTPFDESLVLKNKAQAIEPYLNGRCIYLVGMMGSGKTTV 123

Query: 121 GKILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GKIL++ + Y+F DSDTLVE EVGGTSVA+IFKL+GE FFRDKETEVLRKLSLMH  V+S
Sbjct: 124 GKILSQAINYSFIDSDTLVEHEVGGTSVAEIFKLNGEGFFRDKETEVLRKLSLMHHLVVS 183

Query: 181 TGGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRL 240
           TGGG VVRPINWK M+ GIS+WLDVPLEALA+RIAAVGT SRPLLHHESG+AY K F RL
Sbjct: 184 TGGGAVVRPINWKCMKKGISVWLDVPLEALAQRIAAVGTGSRPLLHHESGDAYRKTFMRL 243

Query: 241 SVLLEERGDAYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQENDYA 299
           + L E+RGD+YANA+A+V L ++A KLG  DV +LTP  I +E L QI+ FL++E+ +A
Sbjct: 244 TSLFEQRGDSYANASARVSLENIAAKLGYRDVSSLTPTAIVIEVLEQIEVFLKEEDGHA 302

[Close]

BLAST of CSPI06G27300 vs. NCBI nr
Match: gi|76782196|gb|ABA54868.1| (putative shikimate kinase [Fagus sylvatica])

HSP 1 Score: 352.1 bits (902), Expect = 9.9e-94
Identity = 185/291 (63.57%), Postives = 222/291 (76.29%), Query Frame = 1


Query: 11  LSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSA-FQQPLRLSNRCRTVSVETSCYRE 70
           +S RI      R+  GSVR  +   +Q +LP LVSA  Q   R SN  +T S+E SC  +
Sbjct: 11  VSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKTASLEVSCSYK 70

Query: 71  NISGLTLETEKSH-PFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIGKILAKELG 130
           N     LE+   H PFD  L+LKNKSQE++P+L+GRCIYLVGMMGSGKTT+GK+L++ L 
Sbjct: 71  NFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLS 130

Query: 131 YTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGGIVVRP 190
           Y F DSDTLVEQ+V   SVA+IF L+GE FFRDKETEVLRKLSLMH  V+STGGG VVRP
Sbjct: 131 YAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVVSTGGGAVVRP 190

Query: 191 INWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKAFRRLSVLLEERGD 250
           INWKYM+ GIS+WLDVPLEALA+RIAAVGT SRPLLHH+SG+AYTK F RL+ L+EER +
Sbjct: 191 INWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMRLTSLMEERSE 250

Query: 251 AYANANAKVCLGSLADKLGLSDVCNLTPADIAVEALVQIQNFLEQEN-DYA 299
           AYANANA+V L  +A KLG  DV NLTP  IA+EAL QI+ FL++EN D+A
Sbjct: 251 AYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKEENGDFA 301

The following BLAST results are available for this feature:

BLAST of CSPI06G27300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SK1_ARATH	2.9e-85	58.72	Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=SK1 PE=1 SV=2	[more]
SK_SOLLC	1.1e-81	53.22	Shikimate kinase, chloroplastic OS=Solanum lycopersicum GN=SK PE=1 SV=1	[more]
SK2_ARATH	3.0e-74	55.67	Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=SK2 PE=1 SV=1	[more]
SK3_ORYSJ	4.3e-73	56.52	Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=SK3 PE=1 SV...	[more]
SK2_ORYSJ	1.4e-71	63.51	Shikimate kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=SK2 PE=1 SV...	[more]

BLAST of CSPI06G27300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFZ0_CUCSA	4.2e-168	99.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487590 PE=3 SV=1	[more]
M5W0C8_PRUPE	3.7e-95	61.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009120mg PE=3 SV=1	[more]
Q30CZ9_FAGSY	6.9e-94	63.57	Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1	[more]
A0A067KSL7_JATCU	7.9e-90	59.93	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09404 PE=3 SV=1	[more]
V4S1P4_9ROSI	1.8e-89	62.72	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026159mg PE=3 SV=1	[more]

BLAST of CSPI06G27300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21940.4	6.6e-88	58.72	shikimate kinase 1	[more]
AT4G39540.3	6.0e-73	53.79	shikimate kinase 2	[more]
AT3G26900.1	1.7e-27	37.02	shikimate kinase like 1	[more]

BLAST of CSPI06G27300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778718035\|ref\|XP_011657795.1\|	6.1e-168	99.67	PREDICTED: shikimate kinase 1, chloroplastic [Cucumis sativus]	[more]
gi\|659079230\|ref\|XP_008440145.1\|	1.2e-158	94.33	PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo]	[more]
gi\|645218840\|ref\|XP_008232698.1\|	1.1e-95	62.21	PREDICTED: shikimate kinase, chloroplastic-like [Prunus mume]	[more]
gi\|595826746\|ref\|XP_007205622.1\|	5.3e-95	61.20	hypothetical protein PRUPE_ppa009120mg [Prunus persica]	[more]
gi\|76782196\|gb\|ABA54868.1\|	9.9e-94	63.57	putative shikimate kinase [Fagus sylvatica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000623	Shikimate_kinase/TSH1
IPR023000	Shikimate_kinase_CS
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004765	shikimate kinase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G27300.1	CSPI06G27300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 103..288 score: 24
IPR023000	Shikimate kinase, conserved site	PROSITE	PS01128	SHIKIMATE_KINASE	coord: 160..185 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 102..285 score: 2.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 104..248 score: 9.19
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 130..143 score: 2.3E-26coord: 159..167 score: 2.3E-26coord: 177..186 score: 2.3E-26coord: 106..121 score: 2.3E-26coord: 197..214 score: 2.3
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 42..295 score: 2.7E
None	No IPR available	PANTHER	PTHR21087:SF8	SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED	coord: 42..295 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G27300	Cla007752	Watermelon (97103) v1	cpiwmB550
CSPI06G27300	Cla008501	Watermelon (97103) v1	cpiwmB521
CSPI06G27300	Csa6G487590	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G27300	Csa2G296130	Cucumber (Chinese Long) v2	cpicuB279
CSPI06G27300	MELO3C007485	Melon (DHL92) v3.5.1	cpimeB508
CSPI06G27300	MELO3C020958	Melon (DHL92) v3.5.1	cpimeB428
CSPI06G27300	ClCG02G001040	Watermelon (Charleston Gray)	cpiwcgB468
CSPI06G27300	ClCG01G016150	Watermelon (Charleston Gray)	cpiwcgB453
CSPI06G27300	Lsi01G010590	Bottle gourd (USVL1VR-Ls)	cpilsiB439
CSPI06G27300	MELO3C020958.2	Melon (DHL92) v3.6.1	cpimedB424
CSPI06G27300	MELO3C007485.2	Melon (DHL92) v3.6.1	cpimedB493
CSPI06G27300	CsaV3_6G042420	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G27300	CsaV3_2G017660	Cucumber (Chinese Long) v3	cpicucB329
CSPI06G27300	Cla97C02G027440	Watermelon (97103) v2	cpiwmbB462
CSPI06G27300	Cla97C01G015150	Watermelon (97103) v2	cpiwmbB433
CSPI06G27300	Bhi03G001536	Wax gourd	cpiwgoB636
CSPI06G27300	Bhi10G001874	Wax gourd	cpiwgoB620
CSPI06G27300	Cucsa.101660	Cucumber (Gy14) v1	cgycpiB122
CSPI06G27300	Cucsa.250400	Cucumber (Gy14) v1	cgycpiB375
CSPI06G27300	CmaCh07G007570	Cucurbita maxima (Rimu)	cmacpiB893
CSPI06G27300	CmaCh02G006000	Cucurbita maxima (Rimu)	cmacpiB633
CSPI06G27300	CmaCh03G010380	Cucurbita maxima (Rimu)	cmacpiB689
CSPI06G27300	CmaCh20G011120	Cucurbita maxima (Rimu)	cmacpiB568
CSPI06G27300	CmoCh03G010380	Cucurbita moschata (Rifu)	cmocpiB681
CSPI06G27300	CmoCh02G006040	Cucurbita moschata (Rifu)	cmocpiB624
CSPI06G27300	CmoCh20G011430	Cucurbita moschata (Rifu)	cmocpiB556
CSPI06G27300	CmoCh07G007790	Cucurbita moschata (Rifu)	cmocpiB873
CSPI06G27300	Cp4.1LG05g10930	Cucurbita pepo (Zucchini)	cpecpiB767
CSPI06G27300	Cp4.1LG19g11760	Cucurbita pepo (Zucchini)	cpecpiB503
CSPI06G27300	Cp4.1LG10g03150	Cucurbita pepo (Zucchini)	cpecpiB080
CSPI06G27300	CsGy6G026670	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G27300	CsGy2G015120	Cucumber (Gy14) v2	cgybcpiB084
CSPI06G27300	Carg05266	Silver-seed gourd	carcpiB0846
CSPI06G27300	Carg00896	Silver-seed gourd	carcpiB0446

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI06G27300	CSPI02G15120	Wild cucumber (PI 183967)	cpicpiB086

The following block(s) are covering this gene:

None