CmoCh07G003940 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATAGCCGTGTACAGTGGTCCGATCTTCCTCCTGAAATTTTGCCGATCATCGGAAAAAGCTTGGAAACGTACATCGAAGTCCTTCGATTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCCCTTCCTCCTTTCAACATCGTTTCTTCTCTTTTACCTCTCGATCTTCCTTCTCCAATCTTCACCGCCGATCATCTCACCGATGCCTTGCTTATCCGAAGGGTTATCTATCGTCTAAGTCCCCTCGATCATCAACACTCGTCCGATTCTGCTTCTTCTTCTTCTTTTGCGGCGGAGGGCTGGTTGGCGAAGGTCGAGAGTACAAAATTAGGTACAATGCGTTTTCTGCATCCGCTTTCTACACGCTATGTTAAATATGATAACGAGGTATTTCGGAAGGAAGTGAACTTGCTGGATTTTCGAATTTACGAAGTAGCTAAATCGTATACGCTTGGATATACTAATGGTGCTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTCCCTGATTGCCCCTGGATTGATGTGAAGTACTGCACCATTGTAGCTGTTTACGCAGGTGGAAAATTAGGGTTTGCCAAACATGGAGATTACAAATGGACGCTGATTGACGACCGGAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTTTATGCAGTTGATAGATGGGGAACAATTTTCTGGATCGATTCATCGATGAGATTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTGGAGTCTGATGATGAACTTTATGTTGTTGATCGATTTCTGGATAAGGAGCCACTGTTATGGAATGCAGATATTTTCCATATCCATTGGTTGAATAATCTCATTGAAGATTCACCTCCTAAAGTAATTGATTTCAAAGTCCACAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGTTAGAAATTTGGGGAATCAATCCTTTGTTTTGGGCAATGATTGTTGTTTTTCAATTTCAGCCCCAAAATTTGAAGGAGTTAAAGGGAGTTGCATATATTTTACTCATGCACCAAGATCCACTCTCGGGTATAACACTCATTATTTCGAGCTCAAGTATAAAAGGATTGCCAAAGCATCAATCCATGATAATGAACCAATTTTTGGGCCGCCCCCAATTTGGCTCAACTTGGAGGCCACTCGGTATGAAGAACATGCTTCTGATAATTTATATGTCTCAGCCTGCTAAGGATGCTGGATGAGATGCAAAAATGGAGTCCCAAGCTCATCAGTTGGCATTCTCGATACTGTAAGTTTTCTTCCTAACTATTTTGTGTTTATCCTGAATCTTAGTGTGGCTCTAAATTAATGGTGTCGTCAATGTGTCATTCTGAATCTTGGCTCTGTAGTCTGTAATAAGGTGTTCTTAGAATGTGTAAATATGTTTTCTTTGAACATGGAGAACTCTCAAGCCCTTGGAAAACTTTCCTCTTTGATTTGATTATCTCTCTACAGTCTTGCACGGTGGTCCGATTTGCCTCCTGAACTTTGGATGTTTCTCCATGTCCCTCATCCTCCCAATGAATACGCAGATTATCGTAGCAATTTACTCTTTACTCTGTTGGATGAAAGTCCCACCTCGGCTCATTTAAGAAATGATCATGGGTTTATAAACGAATACAATCTCCATTGGTACGAGGCATTTTGGGAAGCCCAAAGCAAGCCAAGAGAGCTTATACTTAAAGTGGACAATATCGTACCATTTTGGGGATCCGTGATTCCTAACCTCATTGCAGAGGAAGGAAATGAATTTACTATATTTTCAAATTCACAAAGAGCTTATGTTCAAAGTGGACAATATTATACTATCATGGAGATCCGTGATTCTTTCAAATTCACCAAGAGCTTATGCTCAAAGTGGACAGTATCATACAGGTTGTTGAATCGTGTAGGCTTGTTAGCACTCCGGGAATTGGTGTTTCTGGAATTCGTAAGGTTCCCCATTGATGTTTCTGGTGTTAGACGAACACGACTCTCCGCAATGGTATGATATTGTCCGTCCACTCTGAGCATAAGCTCTCATGGCTTTGCTCTGAGCTTCCCAAAAGGTCTCACACCAATGGAAAGAGTATTCTTTGATTATAAACTCATGATCATTCCCTAAATTAGTCGATGTGGGACTTTTATCATCCAACACTTTCCCTCCGAACAAAGTACGCCTCCCTTTAATCGAGGCTCAACTCCATTTTCTTTTGGAGTCTTAGTCACTTTTTTACTATGCCTTCGAGGAGGCTCGACTCCTTTCCTTTTGGGGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTCTCCACAATAGTATGATATTGTCGACTTTGAGCATAAGCTTTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCTTCACACCGACGGAGAGAGTATTCTTTGATTATAAACCCATGATCATTTCCTAAATTAGCCGATGTGGGACCTTCATCATCCAACCTCTGGAATTCGTAAGGTTCCCCGATTCTCTATGGATCGATGCGAAGGACTGCAACATTATAGCGTTGTACAAAGACGGAAAATTAGGGTTCCCTAAACTTAGGGAGGAACATAATTTTCAATAAAGCGATGCGGTTGGGCGCAGGGGCAATTGTATGCTATTAACTTGAAATTTATGGGTAAAATTGTAAGATTTTAAAATTTATGGACTAAATAAAAAATAAACTAAACTTTATAGATAATATATATATATATATATATATTTATTATTATTATTGTTTTTTTTTGTAAAAAAAAATTATAATTGTATCTCCACGTTATTCTTAACATAAAGTGGTAGAATGAATATCTTTGATAAGAAAATTGAAATGACAAGTAGTTTGAAATATTTGGTCTAAATATAAATATACTTTCCTAGTAAATATTTTATTTTTGAAAATTATAAAGATAAACAAGAAAAAATTTCAAATTAATACTTAAAAAAAAACGAAATATAAACAATAATGAAACAAAATATTAAAATTGAGCACATTAATTGTAACTTGATTTCACCCAAAAAAAAAAAAAAACTTAATTACTATTTGACATTTATTATTTGGAAATTAATCATCTGTACTCAGTTTTTAATTGGTATTTAATCATATTTAATATATTTATAATTAGAAGTACTAACATTTCTAGCATATTTAATATGTAATGAAGCTAATTTATAACTACTCTCCACTAAATCTTCAAATCTTTCATAAATAATATAATATTTTTATTGCTTCTCTTTATTTATATATATATATACAAAATATATTTCTTTAAACATTTAAACATTAATAGTTAATAATAAATTAACTTCTAAAGTTTTAATTTATTTAAATTCAACTTATTCAATGAGTTGAGTTGCATTTTCTTTTATTATCAAATTTTTTCTATTATATATTTATATTTAAATATATATATAAGAAAATAATAAATTTAAGTTTGGTCCAATTATTTGAACTTAATTTGTATTTAGTCCACAAATATTCGTAATTTAACATTTTAGGCCTTCATGTCTTAATTTATATTATAAAATTTTCCCTTCTTCTTCATCTTCTTCTGCGTCCGCGGCCGCACCGCCATGTCGCAGGCTTCCTCGCCCTCTTTAATTACCTCCATTTCTCTCTTTCTTCTTCCCAATTACAATAACCTCACGCCAACGTATATCTTCAACTCATTTTATTTCTAATCTATGTCTTTATTTACGACTCATTTGATAATGTAAGTTTAAGTTTTTGTTCGCAGGGGGAGATTGTTGCCGATAACGGATTCTCTGCACCGCCGCCGGAGATACTCCAGCGTCAGCCATGAACATTCGAGCACCAGGTAAACAAATGCGGCTTCCAATTGTAATGAAATTCGAACATCAATTAATGTGTGTAAAATTCTAACTAGCTTCCAATTTCATTAATCCAAGTCGAAATGCTATTCTGAGAAAGCCGGTGCAAGCCACCACGGCGGTTCCAACCTCGGTGCCGGTGCGTGTAGCTCTGGAGCTTCTTCAAGCAGGATATCGATACTTAGATGTAAGAACGCCGGAAGAGTTCAGAACCGGCCACGCTCGCGCCGCCATTAACATTCCTTACTTGCACAGAGTCGGATCGGGTAATTTTCTGTCCGATTCTCAAAATTTCTCTCCACCGAAATTGAAATTCGATGATTTTTAATGAAGATTTTTTGCAGAGAAGGCGAGGAATCCACATTTCTTAGCGGAAGTGGCGATTCATTTCAGAGAAGATGATGAAATCATCGTTGTAAGTTTGGTTTCATTATGAAATTACATTATGAATCCTTTTGGGAAGAAAAATTTGAAAATCTTGATGATCCTTCACGATTGGAATCTGAATTTTGGTGGTTTTGTATTGTCGGAAAGGGAAGCCGAAGGGGGAAGCGGTCTCGTATGGCTGCCGCCGATCTTCTTGCCTCTGTAAGTCCTTTGGTTTGTTAGTTTTTATTAATTTGACCTATAAAGAATGGGAAGTATGAAGTGATATTTGTGTAGGGATATAGGTATGTAACGGACATATCAGGTGGATATGAAGCTTGGTCTCGCAATGGACTTCCCATGGGAAGTTCTAAATAA ATGGACGATAGCCGTGTACAGTGGTCCGATCTTCCTCCTGAAATTTTGCCGATCATCGGAAAAAGCTTGGAAACGTACATCGAAGTCCTTCGATTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCCCTTCCTCCTTTCAACATCGTTTCTTCTCTTTTACCTCTCGATCTTCCTTCTCCAATCTTCACCGCCGATCATCTCACCGATGCCTTGCTTATCCGAAGGGTTATCTATCGTCTAAGTCCCCTCGATCATCAACACTCGTCCGATTCTGCTTCTTCTTCTTCTTTTGCGGCGGAGGGCTGGTTGGCGAAGGTCGAGAGTACAAAATTAGGTACAATGCGTTTTCTGCATCCGCTTTCTACACGCTATGTTAAATATGATAACGAGGTATTTCGGAAGGAAGTGAACTTGCTGGATTTTCGAATTTACGAAGTAGCTAAATCGTATACGCTTGGATATACTAATGGTGCTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTCCCTGATTGCCCCTGGATTGATGTGAAGTACTGCACCATTGTAGCTGTTTACGCAGGTGGAAAATTAGGGTTTGCCAAACATGGAGATTACAAATGGACGCTGATTGACGACCGGAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTTTATGCAGTTGATAGATGGGGAACAATTTTCTGGATCGATTCATCGATGAGATTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTGGAGTCTGATGATGAACTTTATGTTGTTGATCGATTTCTGGATAAGGAGCCACTGTTATGGAATGCAGATATTTTCCATATCCATTGGTTGAATAATCTCATTGAAGATTCACCTCCTAAAGTAATTGATTTCAAAGTCCACAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGGGGAGATTGTTGCCGATAACGGATTCTCTGCACCGCCGCCGGAGATACTCCAGCCTTCCAATTTCATTAATCCAAGTCGAAATGCTATTCTGAGAAAGCCGGTGCAAGCCACCACGGCGGTTCCAACCTCGGTGCCGGTGCGTGTAGCTCTGGAGCTTCTTCAAGCAGGATATCGATACTTAGATGTAAGAACGCCGGAAGAGTTCAGAACCGGCCACGCTCGCGCCGCCATTAACATTCCTTACTTGCACAGAGTCGGATCGGAGAAGGCGAGGAATCCACATTTCTTAGCGGAAGTGGCGATTCATTTCAGAGAAGATGATGAAATCATCGTTGGAAGCCGAAGGGGGAAGCGGTCTCGTATGGCTGCCGCCGATCTTCTTGCCTCTGGATATAGGTATGTAACGGACATATCAGGTGGATATGAAGCTTGGTCTCGCAATGGACTTCCCATGGGAAGTTCTAAATAA ATGGACGATAGCCGTGTACAGTGGTCCGATCTTCCTCCTGAAATTTTGCCGATCATCGGAAAAAGCTTGGAAACGTACATCGAAGTCCTTCGATTTCGCAGCGTCTGCCGATCTTGGCGTGCTTCCCTTCCTCCTTTCAACATCGTTTCTTCTCTTTTACCTCTCGATCTTCCTTCTCCAATCTTCACCGCCGATCATCTCACCGATGCCTTGCTTATCCGAAGGGTTATCTATCGTCTAAGTCCCCTCGATCATCAACACTCGTCCGATTCTGCTTCTTCTTCTTCTTTTGCGGCGGAGGGCTGGTTGGCGAAGGTCGAGAGTACAAAATTAGGTACAATGCGTTTTCTGCATCCGCTTTCTACACGCTATGTTAAATATGATAACGAGGTATTTCGGAAGGAAGTGAACTTGCTGGATTTTCGAATTTACGAAGTAGCTAAATCGTATACGCTTGGATATACTAATGGTGCTCTTGTTCCTCGAATTACTAAGGTTGTAATGTTCCCTGATTGCCCCTGGATTGATGTGAAGTACTGCACCATTGTAGCTGTTTACGCAGGTGGAAAATTAGGGTTTGCCAAACATGGAGATTACAAATGGACGCTGATTGACGACCGGAATTTTCACTACGACGATGTGATTGTGTACAAGGGGCAGTTTTATGCAGTTGATAGATGGGGAACAATTTTCTGGATCGATTCATCGATGAGATTGGTACAGTTTTCTCCTCCATTGTGTGGTTTTGGTAATCAGAAGCATTTGGTGGAGTCTGATGATGAACTTTATGTTGTTGATCGATTTCTGGATAAGGAGCCACTGTTATGGAATGCAGATATTTTCCATATCCATTGGTTGAATAATCTCATTGAAGATTCACCTCCTAAAGTAATTGATTTCAAAGTCCACAGGCTGGATCAAGAGTGGGGAAGATGGGTGGAGGGGGAGATTGTTGCCGATAACGGATTCTCTGCACCGCCGCCGGAGATACTCCAGCCTTCCAATTTCATTAATCCAAGTCGAAATGCTATTCTGAGAAAGCCGGTGCAAGCCACCACGGCGGTTCCAACCTCGGTGCCGGTGCGTGTAGCTCTGGAGCTTCTTCAAGCAGGATATCGATACTTAGATGTAAGAACGCCGGAAGAGTTCAGAACCGGCCACGCTCGCGCCGCCATTAACATTCCTTACTTGCACAGAGTCGGATCGGAGAAGGCGAGGAATCCACATTTCTTAGCGGAAGTGGCGATTCATTTCAGAGAAGATGATGAAATCATCGTTGGAAGCCGAAGGGGGAAGCGGTCTCGTATGGCTGCCGCCGATCTTCTTGCCTCTGGATATAGGTATGTAACGGACATATCAGGTGGATATGAAGCTTGGTCTCGCAATGGACTTCCCATGGGAAGTTCTAAATAA
BLAST of CmoCh07G003940 vs. Swiss-Prot
Match: STR15_ARATH (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.6e-34 Identity = 80/153 (52.29%), Postives = 99/153 (64.71%), Query Frame = 1
BLAST of CmoCh07G003940 vs. Swiss-Prot
Match: DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 8.1e-34 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
BLAST of CmoCh07G003940 vs. Swiss-Prot
Match: STR16_ARATH (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 6.0e-29 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1
BLAST of CmoCh07G003940 vs. Swiss-Prot
Match: FB72_ARATH (Putative F-box protein At1g65770 OS=Arabidopsis thaliana GN=At1g65770 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 8.7e-28 Identity = 89/325 (27.38%), Postives = 151/325 (46.46%), Query Frame = 1
BLAST of CmoCh07G003940 vs. Swiss-Prot
Match: SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana GN=SKIP23 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.9e-27 Identity = 104/327 (31.80%), Postives = 168/327 (51.38%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TrEMBL
Match: A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507420 PE=4 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 6.0e-161 Identity = 274/334 (82.04%), Postives = 296/334 (88.62%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TrEMBL
Match: A0A0A0KLM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G118170 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.4e-93 Identity = 179/330 (54.24%), Postives = 224/330 (67.88%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TrEMBL
Match: A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507430 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 3.5e-92 Identity = 189/333 (56.76%), Postives = 235/333 (70.57%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TrEMBL
Match: A0A151QQP9_CAJCA (F-box protein SKIP23 OS=Cajanus cajan GN=KK1_046635 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.2e-73 Identity = 147/323 (45.51%), Postives = 202/323 (62.54%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TrEMBL
Match: G7LA96_MEDTR (F-box protein OS=Medicago truncatula GN=MTR_8g074610 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 4.4e-71 Identity = 141/325 (43.38%), Postives = 201/325 (61.85%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TAIR10
Match: AT4G35770.1 (AT4G35770.1 Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 148.7 bits (374), Expect = 9.2e-36 Identity = 80/153 (52.29%), Postives = 99/153 (64.71%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TAIR10
Match: AT5G66040.1 (AT5G66040.1 sulfurtransferase protein 16) HSP 1 Score: 130.2 bits (326), Expect = 3.4e-30 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TAIR10
Match: AT1G65770.1 (AT1G65770.1 ascorbic acid mannose pathway regulator 1) HSP 1 Score: 126.3 bits (316), Expect = 4.9e-29 Identity = 89/325 (27.38%), Postives = 151/325 (46.46%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TAIR10
Match: AT2G17030.1 (AT2G17030.1 F-box family protein with a domain of unknown function (DUF295)) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28 Identity = 104/327 (31.80%), Postives = 168/327 (51.38%), Query Frame = 1
BLAST of CmoCh07G003940 vs. TAIR10
Match: AT2G17690.1 (AT2G17690.1 F-box family protein with a domain of unknown function (DUF295)) HSP 1 Score: 102.4 bits (254), Expect = 7.5e-22 Identity = 103/379 (27.18%), Postives = 161/379 (42.48%), Query Frame = 1
BLAST of CmoCh07G003940 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo]) HSP 1 Score: 582.0 bits (1499), Expect = 9.2e-163 Identity = 275/331 (83.08%), Postives = 296/331 (89.43%), Query Frame = 1
BLAST of CmoCh07G003940 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]) HSP 1 Score: 575.5 bits (1482), Expect = 8.6e-161 Identity = 274/334 (82.04%), Postives = 296/334 (88.62%), Query Frame = 1
BLAST of CmoCh07G003940 vs. NCBI nr
Match: gi|659072629|ref|XP_008466513.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis melo]) HSP 1 Score: 359.4 bits (921), Expect = 9.7e-96 Identity = 184/328 (56.10%), Postives = 230/328 (70.12%), Query Frame = 1
BLAST of CmoCh07G003940 vs. NCBI nr
Match: gi|778698509|ref|XP_004149495.2| (PREDICTED: F-box protein At2g26160-like [Cucumis sativus]) HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93 Identity = 179/330 (54.24%), Postives = 224/330 (67.88%), Query Frame = 1
BLAST of CmoCh07G003940 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus]) HSP 1 Score: 347.1 bits (889), Expect = 5.0e-92 Identity = 189/333 (56.76%), Postives = 235/333 (70.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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