CmoCh03G006730 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G006730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Thiosulfate sulfurtransferase GlpE
Location	Cmo_Chr03 : 5979235 .. 5980793 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCCTAATTCCATTATATATCTCCTTCCCTTCTTCTTCCTCTCATCACTCCCATCCCCTACTTCTTCTACGCTCGATCGCTCGACCCGACCATGTCGCTCGCCTCCTCCTCGTCTTCCATCGTATCGTCCACCTTTCTTCTCCATCCCGACAACACCAATCTCCCTCCAAGGTATCCTCGACTTCTCTCGTTCAAATCAATTGAGCTATATTCGACTTTATTTTTAATGGGTATCTTTTAAAATTATCCAATTCAATAAACCAACGATTTTATTACTAGAGGGAGGTTGTTACCAATTACAGGTTCACTACAACGCCGCCAGAGAGACACTACCATCAGCCATAAAAATTGGAGCACCAGGTAAATAAAAGTGACTCTTAAGAATTCAACTTATACCCTAAACTTTTAGTCGAGAATATACATTAAATTTCGATAAATTCAATATAGTCGAAATGCTGTTCTAAGAGAAGAGATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGTATTTAATGAAATTTTAAATGGGTTTTATATAATTTTTTCAATTTTTAAAAATTAAATTAAAATTTTTAATGTGAATTATATAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGTAAGTTTTATGGTTTAATTAATTAATTAATTTTTTAAAAACTAATTTATTTATTTATTTTTATAAATTTTTATAAATTTAAATTTTGAATTTTAATGGATTTGTATTATTGGATAGGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGTAAGCATCTTGCTTTCTATTTTCTATTTTTATTTTTCTTTCTAAAAAAGAAAAAAAAAATTATATATTTTAAAAATGTTGGATTAAAATAAATATATTATTTTTCATTTTAGTTTCGATATTTTTTAAAATAAATTTTAAATTTACTCTATATACTTTTAATTTAAAATGATTATATTATAAGCATTAGGTGAATAACCATAAATTTATTAAAAATATACGAATTTAAATTAAATATTTGAATGTATCTGAACTAAAATGAAATGAAATAAAACAATACGAAAAATTGGCATTTATAAATTATTTTAAAAATGGATGAATTTGAGTCGACAAAATATTTAATTATAACATATTCAAAATTTTGTAAAAATTCATCCGACATTAAACTTTCAATTTTGAGATTAATGATTCGTGTTCTTAAAATGTGACGAATAGGTGAATGAGCCGGTTAATGGAAATTTAATTAAAATGAAATAAAAATGAAATGTTGGGAAGGGATTTAAATGAAATGAATTGTGTGTAGGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAA

mRNA sequence

ATCCCCTAATTCCATTATATATCTCCTTCCCTTCTTCTTCCTCTCATCACTCCCATCCCCTACTTCTTCTACGCTCGATCGCTCGACCCGACCATGTCGCTCGCCTCCTCCTCGTCTTCCATCGTATCGTCCACCTTTCTTCTCCATCCCGACAACACCAATCTCCCTCCAAGAGGGAGGTTGTTACCAATTACAGGTTCACTACAACGCCGCCAGAGAGACACTACCATCAGCCATAAAAATTGGAGCACCAGTCGAAATGCTGTTCTAAGAGAAGAGATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAA

Coding sequence (CDS)

ATGTCGCTCGCCTCCTCCTCGTCTTCCATCGTATCGTCCACCTTTCTTCTCCATCCCGACAACACCAATCTCCCTCCAAGAGGGAGGTTGTTACCAATTACAGGTTCACTACAACGCCGCCAGAGAGACACTACCATCAGCCATAAAAATTGGAGCACCAGTCGAAATGCTGTTCTAAGAGAAGAGATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAA

Homology

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BLAST of CmoCh03G006730 vs. Swiss-Prot
Match: STR15_ARATH (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = 1


Query: 49  KNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIP 108
           K  +TSR  V  E   AV +PTSVPVRVA EL QAG RYLDVRTP+EFS GH   AIN+P
Sbjct: 53  KATTTSRGNVAAE---AVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVP 112

Query: 109 YMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGG 168
           YMYRVGSGM +NP FL +V+ +FRK DEI++GC SG+ S MA+ DLL +G+  +TDIAGG
Sbjct: 113 YMYRVGSGMVKNPSFLRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGG 172

Query: 169 YEAWSRNGLPME 181
           Y AW+ N LP+E
Sbjct: 173 YVAWTENELPVE 181

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BLAST of CmoCh03G006730 vs. Swiss-Prot
Match: DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 76/116 (65.52%), Postives = 93/116 (80.17%), Query Frame = 1


Query: 65  AVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHFL 124
           A  VPTSVPVRVA EL QAG ++LDVRTP+EFS GH   AIN+PYMYRVGSGM +NP FL
Sbjct: 67  AARVPTSVPVRVARELAQAGYKHLDVRTPDEFSIGHPSRAINVPYMYRVGSGMVKNPSFL 126

Query: 125 AEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 181
            +V+ +FRK DEI++GC SG+RSLMA+ +LL +G+  VTDIAGGY  W+ N LP+E
Sbjct: 127 RQVSSHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVE 182

[Close]

BLAST of CmoCh03G006730 vs. Swiss-Prot
Match: STR16_ARATH (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 9.1e-34
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 1


Query: 64  EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 123
           E   VP+SV V VA +LL AG RYLDVRTPEEFS GHA GAIN+PYM R  SGM++NP F
Sbjct: 3   EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDF 62

Query: 124 LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLP 179
           L +V+ +F + D I+VGC SG RS+ A  DLL +G+  V DI GGY AW++NGLP
Sbjct: 63  LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 117

[Close]

BLAST of CmoCh03G006730 vs. Swiss-Prot
Match: STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-21
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 1


Query: 71  SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGA--INIPYMYRVGSGMTRNPHFLAEVA 130
           SV V  A  LLQ+G +YLDVRT +EF  GH   A  +NIPYM     G  +N  FL +V+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 131 VYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPM 180
                 D+ILVGC SG RSL A  +L+A+GY  V ++ GGY AW  +  P+
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPI 126

[Close]

BLAST of CmoCh03G006730 vs. Swiss-Prot
Match: STR19_ARATH (Rhodanese-like domain-containing protein 19, mitochondrial OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.7e-20
Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1


Query: 36  SLQRRQRDTTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEE 95
           +L   +R T    K   T    +   + + V    +V V  A   L  G RYLDVRT EE
Sbjct: 8   NLSHCRRQTRKKRKTDHTEGFLMEETKPKTVEDVETVDVYTAKGFLSTGHRYLDVRTNEE 67

Query: 96  FSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLL 155
           F+  H   A+NIPYM++   G   NP FL++VA   +K++ ++V C +G R   A  DLL
Sbjct: 68  FAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASVCKKDEHLIVACNAGGRGSRACVDLL 127

Query: 156 ASGYGNVTDIAGGYEAW 173
             GY +V ++ GGY AW
Sbjct: 128 NEGYDHVANMGGGYSAW 144

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BLAST of CmoCh03G006730 vs. TrEMBL
Match: A0A0A0KJI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507370 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.4e-79
Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 1


Query: 2   SLASSSSSIVSST-FLLHPDNTNLPPRGRLLP-ITGSLQRRQRDTTISHKNWSTSRNAVL 61
           SL SSSSSI SST  LL P+  NL  RGRLLP ITGSLQRR+RD+ IS+K+WSTSRNAVL
Sbjct: 3   SLTSSSSSIASSTSHLLLPNTNNLTSRGRLLPMITGSLQRRRRDSAISYKHWSTSRNAVL 62

Query: 62  REEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTR 121
           REE+EA AVPTSVPVRVALELLQAGQRYLDVRTPEE+S GHAPGAINIPYMYRVGSGMTR
Sbjct: 63  REELEATAVPTSVPVRVALELLQAGQRYLDVRTPEEYSVGHAPGAINIPYMYRVGSGMTR 122

Query: 122 NPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPM 181
           NPHFLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLASGY  VTDIAGGYEAWSRNGLPM
Sbjct: 123 NPHFLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLASGYNYVTDIAGGYEAWSRNGLPM 182

[Close]

BLAST of CmoCh03G006730 vs. TrEMBL
Match: Q9M4Y8_CUCSA (OP1 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.8e-71
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 1


Query: 33  ITGSLQRRQRDTTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRT 92
           ITGSLQRR+RD+ IS+K+WSTSRNAVLREE+EA AVPTSVPVRVALELLQAGQRYLDVRT
Sbjct: 2   ITGSLQRRRRDSAISYKHWSTSRNAVLREELEATAVPTSVPVRVALELLQAGQRYLDVRT 61

Query: 93  PEEFSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAA 152
           PEE+S GHAPGAINIPYMYRVGSGMTRNPHFLAEVA+YFRK+DEI+VGCLSGKRSLMAAA
Sbjct: 62  PEEYSVGHAPGAINIPYMYRVGSGMTRNPHFLAEVAIYFRKDDEIIVGCLSGKRSLMAAA 121

Query: 153 DLLASGYGNVTDIAGGYEAWSRNGLPME 181
           DLLASGY  VTDIAGGYEAWSRNGLPME
Sbjct: 122 DLLASGYNYVTDIAGGYEAWSRNGLPME 149

[Close]

BLAST of CmoCh03G006730 vs. TrEMBL
Match: M5VR65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012088mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.0e-47
Identity = 105/184 (57.07%), Postives = 129/184 (70.11%), Query Frame = 1


Query: 1   MSLASSSSSIVSSTF----LLHPDNTNLPPRGRLLPITGSLQRRQRDTTISHKNWSTSRN 60
           +SL SSSS    S      L  P N N   +  L  +  +LQR    T I +KN +    
Sbjct: 4   ISLVSSSSCFTGSALQPPPLFSPQNLN---QRSLFSLNVNLQRL--GTGIQNKNCNFCPR 63

Query: 61  AVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSG 120
           A  +  +EAV VPTSVPVRVA ELLQAG +YLDVRTP+EFS GHAPGA+NIPY+Y++GSG
Sbjct: 64  AAQKGNLEAVGVPTSVPVRVAHELLQAGHKYLDVRTPDEFSKGHAPGAVNIPYLYKLGSG 123

Query: 121 MTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNG 180
           M++NP FL EVA +FRK DEI+VGC  GKRS+MAA DLLA+G+  +TDIAGGY AW++ G
Sbjct: 124 MSKNPEFLKEVASHFRKHDEIIVGCHLGKRSMMAATDLLAAGFSGITDIAGGYAAWTQTG 182

[Close]

BLAST of CmoCh03G006730 vs. TrEMBL
Match: A0A067FVF5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029759mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 108/180 (60.00%), Postives = 126/180 (70.00%), Query Frame = 1


Query: 1   MSLASSSSSIVSSTFLLHPDNTNLPPRGRLLPITGSLQRRQRDTTISHKNWSTSRNAVLR 60
           +SL+S ++   S   +L P   N   R  LL +T   QR      IS K  S    A LR
Sbjct: 7   ISLSSFAAGASSLPPVLCPHGNN---RRGLLSLTVDQQRCDNIGFISSKILSFCPKASLR 66

Query: 61  EEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRN 120
             +EAV VPTSVPVRVA ELLQAG RYLDVRTPEEFSAGHA GAIN+PYMYRVGSGMT+N
Sbjct: 67  GNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN 126

Query: 121 PHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 180
             F+ EV+  FRK DEI+VGC SGKRS+MAA DLL +G+  +TDIAGG+ AW +NGLP E
Sbjct: 127 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183

[Close]

BLAST of CmoCh03G006730 vs. TrEMBL
Match: V4SDE1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026577mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 108/180 (60.00%), Postives = 126/180 (70.00%), Query Frame = 1


Query: 1   MSLASSSSSIVSSTFLLHPDNTNLPPRGRLLPITGSLQRRQRDTTISHKNWSTSRNAVLR 60
           +SL+S ++   S   +L P   N   R  LL +T   QR      IS K  S    A LR
Sbjct: 7   ISLSSFAAGASSLPPVLCPHGNN---RRGLLSLTVDQQRCDNIGFISSKILSFCPKASLR 66

Query: 61  EEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRN 120
             +EAV VPTSVPVRVA ELLQAG RYLDVRTPEEFSAGHA GAIN+PYMYRVGSGMT+N
Sbjct: 67  GNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN 126

Query: 121 PHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 180
             F+ EV+  FRK DEI+VGC SGKRS+MAA DLL +G+  +TDIAGG+ AW +NGLP E
Sbjct: 127 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183

[Close]

BLAST of CmoCh03G006730 vs. TAIR10
Match: AT4G35770.1 (AT4G35770.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 5.6e-42
Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = 1


Query: 49  KNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIP 108
           K  +TSR  V  E   AV +PTSVPVRVA EL QAG RYLDVRTP+EFS GH   AIN+P
Sbjct: 53  KATTTSRGNVAAE---AVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVP 112

Query: 109 YMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGG 168
           YMYRVGSGM +NP FL +V+ +FRK DEI++GC SG+ S MA+ DLL +G+  +TDIAGG
Sbjct: 113 YMYRVGSGMVKNPSFLRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGG 172

Query: 169 YEAWSRNGLPME 181
           Y AW+ N LP+E
Sbjct: 173 YVAWTENELPVE 181

[Close]

BLAST of CmoCh03G006730 vs. TAIR10
Match: AT5G66040.1 (AT5G66040.1 sulfurtransferase protein 16)

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-35
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 1


Query: 64  EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 123
           E   VP+SV V VA +LL AG RYLDVRTPEEFS GHA GAIN+PYM R  SGM++NP F
Sbjct: 3   EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDF 62

Query: 124 LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLP 179
           L +V+ +F + D I+VGC SG RS+ A  DLL +G+  V DI GGY AW++NGLP
Sbjct: 63  LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 117

[Close]

BLAST of CmoCh03G006730 vs. TAIR10
Match: AT5G66170.2 (AT5G66170.2 sulfurtransferase 18)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 1


Query: 71  SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGA--INIPYMYRVGSGMTRNPHFLAEVA 130
           SV V  A  LLQ+G +YLDVRT +EF  GH   A  +NIPYM     G  +N  FL +V+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 131 VYFRKEDEILVGCLSGKRSLMAAADLLA--SGYGNVTDIAGGYEAWSRNGLPM 180
                 D+ILVGC SG RSL A  +L+A  SGY  V ++ GGY AW  +  P+
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHSFPI 128

[Close]

BLAST of CmoCh03G006730 vs. TAIR10
Match: AT2G21045.1 (AT2G21045.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-21
Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1


Query: 36  SLQRRQRDTTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEE 95
           +L   +R T    K   T    +   + + V    +V V  A   L  G RYLDVRT EE
Sbjct: 8   NLSHCRRQTRKKRKTDHTEGFLMEETKPKTVEDVETVDVYTAKGFLSTGHRYLDVRTNEE 67

Query: 96  FSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLL 155
           F+  H   A+NIPYM++   G   NP FL++VA   +K++ ++V C +G R   A  DLL
Sbjct: 68  FAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASVCKKDEHLIVACNAGGRGSRACVDLL 127

Query: 156 ASGYGNVTDIAGGYEAW 173
             GY +V ++ GGY AW
Sbjct: 128 NEGYDHVANMGGGYSAW 144

[Close]

BLAST of CmoCh03G006730 vs. TAIR10
Match: AT2G17850.1 (AT2G17850.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1


Query: 71  SVPVRVALELLQAGQRYLDVRTPEEFSAGH--APGAINIPYMYRVGSGMTRNPHFLAEVA 130
           ++ V  A +LL +G  +LDVRT EEF  GH  +    N+PY      G   NP+FL  V+
Sbjct: 34  TIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKHVS 93

Query: 131 VYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 182
               + D +++GC SG RSL A   L++SG+  V ++ GGY AW     P+++
Sbjct: 94  SLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKV 146

[Close]

BLAST of CmoCh03G006730 vs. NCBI nr
Match: gi|449434108|ref|XP_004134838.1| (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78
Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 1


Query: 2   SLASSSSSIVSST-FLLHPDNTNLPPRGRLLP-ITGSLQRRQRDTTISHKNWSTSRNAVL 61
           SL SSSSSI SST  LL P+  NL  RGRLLP ITGSLQRR+RD+ IS+K+WSTSRNAVL
Sbjct: 3   SLTSSSSSIASSTSHLLLPNTNNLTSRGRLLPMITGSLQRRRRDSAISYKHWSTSRNAVL 62

Query: 62  REEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTR 121
           REE+EA AVPTSVPVRVALELLQAGQRYLDVRTPEE+S GHAPGAINIPYMYRVGSGMTR
Sbjct: 63  REELEATAVPTSVPVRVALELLQAGQRYLDVRTPEEYSVGHAPGAINIPYMYRVGSGMTR 122

Query: 122 NPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPM 181
           NPHFLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLASGY  VTDIAGGYEAWSRNGLPM
Sbjct: 123 NPHFLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLASGYNYVTDIAGGYEAWSRNGLPM 182

[Close]

BLAST of CmoCh03G006730 vs. NCBI nr
Match: gi|659080606|ref|XP_008440882.1| (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 5.1e-77
Identity = 157/184 (85.33%), Postives = 165/184 (89.67%), Query Frame = 1


Query: 2   SLASSSSSIVSST-FLLHPDNTN--LPPRGRLLP-ITGSLQRRQRDTTISHKNWSTSRNA 61
           SL SSSSSI SST  LL   NTN  L  R RLLP ITGSL RR+RD+ +SHK+WSTSRNA
Sbjct: 3   SLTSSSSSIASSTSHLLGLPNTNNNLTSRVRLLPMITGSLHRRRRDSAVSHKHWSTSRNA 62

Query: 62  VLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGM 121
           VLREEMEA AVPTSVPVRVALELLQAGQRYLDVRTPEEFS GHAPGAINIPYMYRVGSGM
Sbjct: 63  VLREEMEATAVPTSVPVRVALELLQAGQRYLDVRTPEEFSVGHAPGAINIPYMYRVGSGM 122

Query: 122 TRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGL 181
           TRNPHFLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLA+GY  VTDIAGGYEAWSRNGL
Sbjct: 123 TRNPHFLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLAAGYNYVTDIAGGYEAWSRNGL 182

[Close]

BLAST of CmoCh03G006730 vs. NCBI nr
Match: gi|821595263|ref|NP_001295766.1| (uncharacterized protein LOC101216776 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 5.4e-71
Identity = 134/148 (90.54%), Postives = 143/148 (96.62%), Query Frame = 1


Query: 33  ITGSLQRRQRDTTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRT 92
           ITGSLQRR+RD+ IS+K+WSTSRNAVLREE+EA AVPTSVPVRVALELLQAGQRYLDVRT
Sbjct: 2   ITGSLQRRRRDSAISYKHWSTSRNAVLREELEATAVPTSVPVRVALELLQAGQRYLDVRT 61

Query: 93  PEEFSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAA 152
           PEE+S GHAPGAINIPYMYRVGSGMTRNPHFLAEVA+YFRK+DEI+VGCLSGKRSLMAAA
Sbjct: 62  PEEYSVGHAPGAINIPYMYRVGSGMTRNPHFLAEVAIYFRKDDEIIVGCLSGKRSLMAAA 121

Query: 153 DLLASGYGNVTDIAGGYEAWSRNGLPME 181
           DLLASGY  VTDIAGGYEAWSRNGLPME
Sbjct: 122 DLLASGYNYVTDIAGGYEAWSRNGLPME 149

[Close]

BLAST of CmoCh03G006730 vs. NCBI nr
Match: gi|1009159560|ref|XP_015897877.1| (PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 102/138 (73.91%), Postives = 117/138 (84.78%), Query Frame = 1


Query: 44  TTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPG 103
           T I HK  S    A LR  +EAV VPTSVPVRVA+ELLQAG RYLDVRTPEEFSAGHAP 
Sbjct: 43  TAIKHKVSSFCPKAALRGNLEAVGVPTSVPVRVAIELLQAGHRYLDVRTPEEFSAGHAPR 102

Query: 104 AINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVT 163
           AINIPYMY+VGSGMT+NPHFLAEV  +FRK+DEI+VGCLSGKRS+MAAADLLA+G+  +T
Sbjct: 103 AINIPYMYKVGSGMTKNPHFLAEVLSHFRKDDEIIVGCLSGKRSMMAAADLLAAGFSGIT 162

Query: 164 DIAGGYEAWSRNGLPMEL 182
           DIAGGY AW+ + LP+E+
Sbjct: 163 DIAGGYAAWTESELPIEM 180

[Close]

BLAST of CmoCh03G006730 vs. NCBI nr
Match: gi|1009144461|ref|XP_015889814.1| (PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 209.1 bits (531), Expect = 6.2e-51
Identity = 101/138 (73.19%), Postives = 117/138 (84.78%), Query Frame = 1


Query: 44  TTISHKNWSTSRNAVLREEMEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPG 103
           T I HK  +    A LR  +EAV VPTSVPVRVA+ELLQAG RYLDVRTPEEFSAGHAP 
Sbjct: 43  TGIKHKVSNFCPKAALRGNLEAVGVPTSVPVRVAIELLQAGHRYLDVRTPEEFSAGHAPR 102

Query: 104 AINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVT 163
           AINIPYMY+VGSGMT+NPHFLAEV  +FRK+DEI+VGCLSGKRS+MAAADLLA+G+  +T
Sbjct: 103 AINIPYMYKVGSGMTKNPHFLAEVLSHFRKDDEIIVGCLSGKRSMMAAADLLAAGFSGIT 162

Query: 164 DIAGGYEAWSRNGLPMEL 182
           DIAGGY AW+ + LP+E+
Sbjct: 163 DIAGGYAAWTESELPIEM 180

The following BLAST results are available for this feature:

BLAST of CmoCh03G006730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STR15_ARATH	1.0e-40	62.88	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia...	[more]
DIN1_RAPSA	2.5e-39	65.52	Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1	[more]
STR16_ARATH	9.1e-34	60.87	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16...	[more]
STR18_ARATH	3.0e-21	46.85	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=1	[more]
STR19_ARATH	9.7e-20	37.96	Rhodanese-like domain-containing protein 19, mitochondrial OS=Arabidopsis thalia...	[more]

BLAST of CmoCh03G006730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJI5_CUCSA	8.4e-79	86.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507370 PE=4 SV=1	[more]
Q9M4Y8_CUCSA	3.8e-71	90.54	OP1 OS=Cucumis sativus PE=2 SV=1	[more]
M5VR65_PRUPE	5.0e-47	57.07	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012088mg PE=4 SV=1	[more]
A0A067FVF5_CITSI	1.4e-46	60.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029759mg PE=4 SV=1	[more]
V4SDE1_9ROSI	1.4e-46	60.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026577mg PE=4 SV=1	[more]

BLAST of CmoCh03G006730 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35770.1	5.6e-42	62.88	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66040.1	5.1e-35	60.87	sulfurtransferase protein 16	[more]
AT5G66170.2	2.5e-21	46.90	sulfurtransferase 18	[more]
AT2G21045.1	5.5e-21	37.96	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT2G17850.1	3.7e-17	38.05	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]

BLAST of CmoCh03G006730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434108\|ref\|XP_004134838.1\|	1.2e-78	86.19	PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis sativus]	[more]
gi\|659080606\|ref\|XP_008440882.1\|	5.1e-77	85.33	PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis melo]	[more]
gi\|821595263\|ref\|NP_001295766.1\|	5.4e-71	90.54	uncharacterized protein LOC101216776 [Cucumis sativus]	[more]
gi\|1009159560\|ref\|XP_015897877.1\|	1.6e-51	73.91	PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic isoform X1...	[more]
gi\|1009144461\|ref\|XP_015889814.1\|	6.2e-51	73.19	PREDICTED: rhodanese-like domain-containing protein 15, chloroplastic [Ziziphus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001763	Rhodanese-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G006730.1	CmoCh03G006730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	GENE3D	G3DSA:3.40.250.10		coord: 64..180 score: 6.4
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 83..174 score: 4.7
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 71..178 score: 1.2
IPR001763	Rhodanese-like domain	PROFILE	PS50206	RHODANESE_3	coord: 81..181 score: 18
IPR001763	Rhodanese-like domain	unknown	SSF52821	Rhodanese/Cell cycle control phosphatase	coord: 66..179 score: 2.1
None	No IPR available	PANTHER	PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	coord: 59..180 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G006730	Cucsa.044010	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G006730	CmaCh03G006450	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G006730	Cla014327	Watermelon (97103) v1	cmowmB623
CmoCh03G006730	Csa6G507370	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G006730	MELO3C007949	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G006730	ClCG01G020660	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G006730	CSPI06G32210	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G006730	Lsi01G005580	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G006730	Cp4.1LG10g10340	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G006730	Cp4.1LG19g08490	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G006730	MELO3C007949.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G006730	CsaV3_6G047570	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G006730	Cla97C01G020160	Watermelon (97103) v2	cmowmbB642
CmoCh03G006730	Bhi03G000593	Wax gourd	cmowgoB0781
CmoCh03G006730	CsGy6G031770	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G006730	Carg07929	Silver-seed gourd	carcmoB0886
CmoCh03G006730	Carg00555	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G006730	CmoCh07G003940	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G006730	Cucurbita pepo (Zucchini)	cmocpeB608
CmoCh03G006730	Cucurbita pepo (Zucchini)	cmocpeB611
CmoCh03G006730	Bottle gourd (USVL1VR-Ls)	cmolsiB605
CmoCh03G006730	Cucumber (Gy14) v2	cgybcmoB380
CmoCh03G006730	Melon (DHL92) v3.6.1	cmomedB682
CmoCh03G006730	Silver-seed gourd	carcmoB0477
CmoCh03G006730	Cucumber (Chinese Long) v3	cmocucB0769
CmoCh03G006730	Watermelon (97103) v2	cmowmbB645
CmoCh03G006730	Wax gourd	cmowgoB0767
CmoCh03G006730	Cucurbita moschata (Rifu)	cmocmoB417
CmoCh03G006730	Cucumber (Gy14) v1	cgycmoB0892
CmoCh03G006730	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G006730	Wild cucumber (PI 183967)	cmocpiB658
CmoCh03G006730	Cucumber (Chinese Long) v2	cmocuB646
CmoCh03G006730	Melon (DHL92) v3.5.1	cmomeB595
CmoCh03G006730	Watermelon (Charleston Gray)	cmowcgB569
CmoCh03G006730	Watermelon (97103) v1	cmowmB608