Carg00555 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00555
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rhodanese-related sulfurtransferase
Location	Cucurbita_argyrosperma_scaffold_014 : 310126 .. 312016 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCCTCTCATCACTCCCATCCCCTACTTCTTCTACGCTCGATCGCTCGACCCGACCATGTCGCTCGCCTCCTCCTCGTCTTCCATCGTATCGTCCACCTTTCTTCTCCATCCCGACAACACCAATCTCCCTCCAAGGTATCCTCGACTTCTCTCGTTCAAATCAATTGAGCTATATTCGACTTTATTTTTAATGGGTATCTTTTAAAATTATCCAATTCAATAAACCAACGATTTTATTACTAGAGGGAGGTTGTTACCAATTACAGGTTCACTACAACGCCGCCAGAGAGACACTACCATCGGCCATAAAAATTGGAGCACCAGGTAAATAAAAGTGACTCTTAAGAATTCAACTTATACCCTAAACTTTTAGTCGAGAATATACATTAAATTTCGATAAATTCAATATAGTCGAAATGCTGTTCTAAGAGAAGAGATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGTATTTAATGAAATTTTAAATGGGTTTTATATAATTTTTTCAATTTTTAAAAATTAAATTAAAATTTTTAATGTGAATTATATAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGTAAGTTTTATGGTTTAATTAATTAATTAATTTTTTAAAAACTAATTTATTTATTTATTTTTATAAATTTTTATAAATTTAAATTTTGAATTTTAATGGATTTGTATTATTGGATAGGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGTAAGCATCTTGCTTTCTATTTTCTATTTTTATTTTTCTTTCTAAAAAAGAAAAAAAAAATTATATATTTTAAAAATGTTGGATTAAAATAAATATATTATTTTTCATTTTAGTTTCGATATTTTTTAAAATAAATTTTAAATTTACTCTATATACTTTTAATTTAAAATGATTATATTATAAGCATTAGGTGAATAACCATAAATTTATTAAAAATATACGAATTTAAATTAAATATTTGAACGTATTTAAATTAAAATGGAATGAAATAAAAAAATACGGGACTAGAATATTTTGAATTGGCATTTATAAATTATTTTAAAAATTGATGAATTTGAGTCGACAAAATATTTAATTATAACATATTCAAAATTTTGTAAAAATTCATCCGACATTAAACTTTCAATTTTGAGATTAATGATTCGTGTTCTTAAAATGTGACGAATAGGTGAATGAGCCGGTTAATGGAAATTTAATTAAAATGAAATAAAAATGAAATGTTGGGAAGGGATTTAAATGAAATGAATTGTGTGTAGGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAAATATTTTTGTGGACATCTCACCTTCTCCTAATTTTGCACACCCACCACAATTTTATTTAATATAATCTCCACAAAATATCCTATATTTTTCCGATATATTAAATGTCGGTTTTCATAGGTTAAATCGTATGTTACATTTCTCAACTGGTTAAGCTGTATGTCAATTTTTAGTTGCTTTGTAAAGAATTTGTAAATAAAAGGTACTGTTGGAGCTGGGTGATTGTTGATGGATGATGTTTGTAAATTTTAATAATTAATAAAATAGTACGAAGAAAACAAAGAGATGGCTAATCAGAACGTTACTACCAATGTTTATTTGTAATTCTTTTCAGTTTAAGGAAGATAATTTC

mRNA sequence

TTCTTCTTCCTCTCATCACTCCCATCCCCTACTTCTTCTACGCTCGATCGCTCGACCCGACCATGTCGCTCGCCTCCTCCTCGTCTTCCATCGTATCTTTTAAAATTATCCAATTCAATAAACCAACGATTTTATTACTAGAGGGAGGTTGTTACCAATTACAGGTTCACTACAACGCCGCCAGAGAGACACTACCATCGGCCATAAAAATTGGAGCACCAGTCGAAATGCTGTTCTAAGAGAAGAGATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAAATATTTTTGTGGACATCTCACCTTCTCCTAATTTTGCACACCCACCACAATTTTATTTAATATAATCTCCACAAAATATCCTATATTTTTCCGATATATTAAATGTCGGTTTTCATAGGTTAAATCGTATGTTACATTTCTCAACTGGTTAAGCTGTATGTCAATTTTTAGTTGCTTTGTAAAGAATTTGTAAATAAAAGGTACTGTTGGAGCTGGGTGATTGTTGATGGATGATGTTTGTAAATTTTAATAATTAATAAAATAGTACGAAGAAAACAAAGAGATGGCTAATCAGAACGTTACTACCAATGTTTATTTGTAATTCTTTTCAGTTTAAGGAAGATAATTTC

Coding sequence (CDS)

ATGGAAGCTGTCGCGGTTCCAACGTCGGTGCCGGTGCGTGTAGCTCTCGAGCTTCTTCAAGCCGGACAGCGATACTTAGACGTAAGAACCCCTGAAGAGTTCAGCGCAGGGCATGCCCCTGGCGCCATTAACATCCCCTATATGTACAGGGTAGGATCAGGAATGACAAGGAACCCGCATTTCTTAGCTGAAGTGGCGGTTTATTTCAGAAAAGAGGATGAAATTCTTGTCGGATGCCTAAGTGGGAAGCGCTCTCTAATGGCTGCCGCTGATCTTCTTGCTTCCGGGTACGGGAACGTGACGGACATAGCGGGTGGATATGAAGCTTGGTCCCGCAATGGACTGCCCATGGAATTGTAA

Protein sequence

MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL

Homology

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BLAST of Carg00555 vs. NCBI nr
Match: XP_022949715.1 (rhodanese-like domain-containing protein 15, chloroplastic [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 63  MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 122

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL
Sbjct: 123 FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 181

[Close]

BLAST of Carg00555 vs. NCBI nr
Match: XP_022977550.1 (thiosulfate sulfurtransferase 16, chloroplastic [Cucurbita maxima])

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           MEA AVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 63  MEATAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 122

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL
Sbjct: 123 FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 181

[Close]

BLAST of Carg00555 vs. NCBI nr
Match: XP_023543884.1 (rhodanese-like domain-containing protein 15, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-60
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           MEA AVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 108 MEATAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 167

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL
Sbjct: 168 FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 226

[Close]

BLAST of Carg00555 vs. NCBI nr
Match: XP_008440882.1 (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 5.7e-57
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           MEA AVPTSVPVRVALELLQAGQRYLDVRTPEEFS GHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 68  MEATAVPTSVPVRVALELLQAGQRYLDVRTPEEFSVGHAPGAINIPYMYRVGSGMTRNPH 127

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLA+GY  VTDIAGGYEAWSRNGLPMEL
Sbjct: 128 FLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLAAGYNYVTDIAGGYEAWSRNGLPMEL 186

[Close]

BLAST of Carg00555 vs. NCBI nr
Match: XP_004134838.1 (PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis sativus] >KGN48964.1 hypothetical protein Csa_6G507370 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 4.8e-56
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           +EA AVPTSVPVRVALELLQAGQRYLDVRTPEE+S GHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 66  LEATAVPTSVPVRVALELLQAGQRYLDVRTPEEYSVGHAPGAINIPYMYRVGSGMTRNPH 125

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
           FLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLASGY  VTDIAGGYEAWSRNGLPME
Sbjct: 126 FLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLASGYNYVTDIAGGYEAWSRNGLPME 183

[Close]

BLAST of Carg00555 vs. TAIR10
Match: AT4G35770.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 4.8e-42
Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 2   EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 61
           EAV +PTSVPVRVA EL QAG RYLDVRTP+EFS GH   AIN+PYMYRVGSGM +NP F
Sbjct: 65  EAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYMYRVGSGMVKNPSF 124

Query: 62  LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
           L +V+ +FRK DEI++GC SG+ S MA+ DLL +G+  +TDIAGGY AW+ N LP+E
Sbjct: 125 LRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPVE 181

[Close]

BLAST of Carg00555 vs. TAIR10
Match: AT5G66040.1 (sulfurtransferase protein 16)

HSP 1 Score: 144.4 bits (363), Expect = 4.4e-35
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 2   EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 61
           E   VP+SV V VA +LL AG RYLDVRTPEEFS GHA GAIN+PYM R  SGM++NP F
Sbjct: 3   EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDF 62

Query: 62  LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLP 117
           L +V+ +F + D I+VGC SG RS+ A  DLL +G+  V DI GGY AW++NGLP
Sbjct: 63  LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 117

[Close]

BLAST of Carg00555 vs. TAIR10
Match: AT5G66170.2 (sulfurtransferase 18)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-21
Identity = 53/113 (46.90%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 9   SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGA--INIPYMYRVGSGMTRNPHFLAEVA 68
           SV V  A  LLQ+G +YLDVRT +EF  GH   A  +NIPYM     G  +N  FL +V+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 69  VYFRKEDEILVGCLSGKRSLMAAADLLA--SGYGNVTDIAGGYEAWSRNGLPM 118
                 D+ILVGC SG RSL A  +L+A  SGY  V ++ GGY AW  +  P+
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHSFPI 128

[Close]

BLAST of Carg00555 vs. TAIR10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 2.8e-21
Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 9   SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVY 68
           +V V  A   L  G RYLDVRT EEF+  H   A+NIPYM++   G   NP FL++VA  
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASV 102

Query: 69  FRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAW 111
            +K++ ++V C +G R   A  DLL  GY +V ++ GGY AW
Sbjct: 103 CKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAW 144

[Close]

BLAST of Carg00555 vs. TAIR10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.4e-17
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 9   SVPVRVALELLQAGQRYLDVRTPEEFSAGH--APGAINIPYMYRVGSGMTRNPHFLAEVA 68
           ++ V  A +LL +G  +LDVRT EEF  GH  +    N+PY      G   NP+FL  V+
Sbjct: 34  TIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKHVS 93

Query: 69  VYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
               + D +++GC SG RSL A   L++SG+  V ++ GGY AW     P+++
Sbjct: 94  SLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKV 146

[Close]

BLAST of Carg00555 vs. Swiss-Prot
Match: sp|Q38853|STR15_ARATH (Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR15 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 8.7e-41
Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 2   EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 61
           EAV +PTSVPVRVA EL QAG RYLDVRTP+EFS GH   AIN+PYMYRVGSGM +NP F
Sbjct: 65  EAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYMYRVGSGMVKNPSF 124

Query: 62  LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
           L +V+ +FRK DEI++GC SG+ S MA+ DLL +G+  +TDIAGGY AW+ N LP+E
Sbjct: 125 LRQVSSHFRKHDEIIIGCESGQMSFMASTDLLTAGFTAITDIAGGYVAWTENELPVE 181

[Close]

BLAST of Carg00555 vs. Swiss-Prot
Match: sp|P27626|DIN1_RAPSA (Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-39
Identity = 76/116 (65.52%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 3   AVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHFL 62
           A  VPTSVPVRVA EL QAG ++LDVRTP+EFS GH   AIN+PYMYRVGSGM +NP FL
Sbjct: 67  AARVPTSVPVRVARELAQAGYKHLDVRTPDEFSIGHPSRAINVPYMYRVGSGMVKNPSFL 126

Query: 63  AEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
            +V+ +FRK DEI++GC SG+RSLMA+ +LL +G+  VTDIAGGY  W+ N LP+E
Sbjct: 127 RQVSSHFRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTENELPVE 182

[Close]

BLAST of Carg00555 vs. Swiss-Prot
Match: sp|Q39129|STR16_ARATH (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 7.9e-34
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 2   EAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHF 61
           E   VP+SV V VA +LL AG RYLDVRTPEEFS GHA GAIN+PYM R  SGM++NP F
Sbjct: 3   EESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDF 62

Query: 62  LAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLP 117
           L +V+ +F + D I+VGC SG RS+ A  DLL +G+  V DI GGY AW++NGLP
Sbjct: 63  LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLP 117

[Close]

BLAST of Carg00555 vs. Swiss-Prot
Match: sp|Q9FKW8|STR18_ARATH (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-21
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 0


Query: 9   SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGA--INIPYMYRVGSGMTRNPHFLAEVA 68
           SV V  A  LLQ+G +YLDVRT +EF  GH   A  +NIPYM     G  +N  FL +V+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 69  VYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPM 118
                 D+ILVGC SG RSL A  +L+A+GY  V ++ GGY AW  +  P+
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPI 126

[Close]

BLAST of Carg00555 vs. Swiss-Prot
Match: sp|Q8RUD6|HARC1_ARATH (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.0e-20
Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 9   SVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPHFLAEVAVY 68
           +V V  A   L  G RYLDVRT EEF+  H   A+NIPYM++   G   NP FL++VA  
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASV 102

Query: 69  FRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAW 111
            +K++ ++V C +G R   A  DLL  GY +V ++ GGY AW
Sbjct: 103 CKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAW 144

[Close]

BLAST of Carg00555 vs. TrEMBL
Match: tr|A0A1S3B255|A0A1S3B255_CUCME (thiosulfate sulfurtransferase 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485172 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.8e-57
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           MEA AVPTSVPVRVALELLQAGQRYLDVRTPEEFS GHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 68  MEATAVPTSVPVRVALELLQAGQRYLDVRTPEEFSVGHAPGAINIPYMYRVGSGMTRNPH 127

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLA+GY  VTDIAGGYEAWSRNGLPMEL
Sbjct: 128 FLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLAAGYNYVTDIAGGYEAWSRNGLPMEL 186

[Close]

BLAST of Carg00555 vs. TrEMBL
Match: tr|A0A0A0KJI5|A0A0A0KJI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507370 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-56
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           +EA AVPTSVPVRVALELLQAGQRYLDVRTPEE+S GHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 66  LEATAVPTSVPVRVALELLQAGQRYLDVRTPEEYSVGHAPGAINIPYMYRVGSGMTRNPH 125

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
           FLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLASGY  VTDIAGGYEAWSRNGLPME
Sbjct: 126 FLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLASGYNYVTDIAGGYEAWSRNGLPME 183

[Close]

BLAST of Carg00555 vs. TrEMBL
Match: tr|Q9M4Y8|Q9M4Y8_CUCSA (OP1 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.2e-56
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           +EA AVPTSVPVRVALELLQAGQRYLDVRTPEE+S GHAPGAINIPYMYRVGSGMTRNPH
Sbjct: 32  LEATAVPTSVPVRVALELLQAGQRYLDVRTPEEYSVGHAPGAINIPYMYRVGSGMTRNPH 91

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPME 119
           FLAEVA+YFRK+DEI+VGCLSGKRSLMAAADLLASGY  VTDIAGGYEAWSRNGLPME
Sbjct: 92  FLAEVAIYFRKDDEIIVGCLSGKRSLMAAADLLASGYNYVTDIAGGYEAWSRNGLPME 149

[Close]

BLAST of Carg00555 vs. TrEMBL
Match: tr|A0A2P5BMI4|A0A2P5BMI4_PARAD (Rhodanese-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_226000 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.3e-46
Identity = 90/119 (75.63%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           +EA   PTSVPVRVA ELLQAG RYLDVRTPEEFSAGHAPGA+NIPYMY+VGSGMT+NPH
Sbjct: 64  LEATRAPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAPGAVNIPYMYKVGSGMTKNPH 123

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLA+V  +FRK+DEI+VGC SGKRS+MAA DLLA+G+  +TDIAGG+  W++N LPMEL
Sbjct: 124 FLAQVLSHFRKQDEIIVGCQSGKRSIMAATDLLAAGFTCITDIAGGHATWAQNSLPMEL 182

[Close]

BLAST of Carg00555 vs. TrEMBL
Match: tr|A0A2P5EB08|A0A2P5EB08_9ROSA (Rhodanese-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_214560 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.7e-46
Identity = 89/119 (74.79%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MEAVAVPTSVPVRVALELLQAGQRYLDVRTPEEFSAGHAPGAINIPYMYRVGSGMTRNPH 60
           +EA  VPTSVPVRVA ELLQAG RYLDVRTPEEFSAGHAPGA+NIPYMY+VGSGMT+NPH
Sbjct: 61  LEATRVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAPGAVNIPYMYKVGSGMTKNPH 120

Query: 61  FLAEVAVYFRKEDEILVGCLSGKRSLMAAADLLASGYGNVTDIAGGYEAWSRNGLPMEL 120
           FLA+V  +FRK+DEI+VGC SGKRS+MAA DLL++G+  +TDIAGG+  W++N LP EL
Sbjct: 121 FLAQVLSHFRKQDEIIVGCQSGKRSMMAATDLLSAGFTCITDIAGGHATWAQNSLPTEL 179

The following BLAST results are available for this feature:

BLAST of Carg00555 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949715.1	1.5e-60	100.00	rhodanese-like domain-containing protein 15, chloroplastic [Cucurbita moschata]	[more]
XP_022977550.1	4.2e-60	99.16	thiosulfate sulfurtransferase 16, chloroplastic [Cucurbita maxima]	[more]
XP_023543884.1	4.2e-60	99.16	rhodanese-like domain-containing protein 15, chloroplastic [Cucurbita pepo subsp...	[more]
XP_008440882.1	5.7e-57	93.28	PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis melo]	[more]
XP_004134838.1	4.8e-56	92.37	PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic [Cucumis sativus] >KG...	[more]

BLAST of Carg00555 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35770.1	4.8e-42	66.67	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66040.1	4.4e-35	60.87	sulfurtransferase protein 16	[more]
AT5G66170.2	1.6e-21	46.90	sulfurtransferase 18	[more]
AT2G21045.1	2.8e-21	45.10	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT2G17850.1	2.4e-17	38.05	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]

BLAST of Carg00555 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38853\|STR15_ARATH	8.7e-41	66.67	Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|P27626\|DIN1_RAPSA	2.8e-39	65.52	Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1	[more]
sp\|Q39129\|STR16_ARATH	7.9e-34	60.87	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FKW8\|STR18_ARATH	2.0e-21	46.85	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S...	[more]
sp\|Q8RUD6\|HARC1_ARATH	5.0e-20	45.10	Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg00555 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B255\|A0A1S3B255_CUCME	3.8e-57	93.28	thiosulfate sulfurtransferase 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KJI5\|A0A0A0KJI5_CUCSA	3.2e-56	92.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507370 PE=4 SV=1	[more]
tr\|Q9M4Y8\|Q9M4Y8_CUCSA	3.2e-56	92.37	OP1 OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
tr\|A0A2P5BMI4\|A0A2P5BMI4_PARAD	2.3e-46	75.63	Rhodanese-like domain containing protein OS=Parasponia andersonii OX=3476 GN=Pan...	[more]
tr\|A0A2P5EB08\|A0A2P5EB08_9ROSA	8.7e-46	74.79	Rhodanese-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036873	Rhodanese-like_dom_sf
IPR001763	Rhodanese-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00555-RA	Carg00555-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 9..116 e-value: 1.2E-19 score: 81.2
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 19..112 e-value: 1.2E-13 score: 51.4
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 19..119 score: 18.153
IPR036873	Rhodanese-like domain superfamily	GENE3D	G3DSA:3.40.250.10		coord: 1..118 e-value: 3.5E-32 score: 112.9
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	SSF52821	Rhodanese/Cell cycle control phosphatase	coord: 4..117
None	No IPR available	PANTHER	PTHR45431	FAMILY NOT NAMED	coord: 1..118
None	No IPR available	CDD	cd00158	RHOD	coord: 15..110 e-value: 7.86229E-22 score: 82.7326

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00555	Cla014327	Watermelon (97103) v1	carwmB0407
Carg00555	Csa6G507370	Cucumber (Chinese Long) v2	carcuB0441
Carg00555	MELO3C007949	Melon (DHL92) v3.5.1	carmeB0414
Carg00555	ClCG01G020660	Watermelon (Charleston Gray)	carwcgB0397
Carg00555	CSPI06G32210	Wild cucumber (PI 183967)	carcpiB0446
Carg00555	Cucsa.044010	Cucumber (Gy14) v1	carcgyB0466
Carg00555	CmaCh07G003990	Cucurbita maxima (Rimu)	carcmaB0571
Carg00555	CmaCh03G006450	Cucurbita maxima (Rimu)	carcmaB0567
Carg00555	CmoCh07G003940	Cucurbita moschata (Rifu)	carcmoB0554
Carg00555	CmoCh03G006730	Cucurbita moschata (Rifu)	carcmoB0551
Carg00555	Lsi01G005580	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00555	Cp4.1LG10g10340	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00555	Cp4.1LG19g08490	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00555	CsGy6G031770	Cucumber (Gy14) v2	carcgybB0418
Carg00555	MELO3C007949.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00555	CsaV3_6G047570	Cucumber (Chinese Long) v3	carcucB0442
Carg00555	Cla97C01G020160	Watermelon (97103) v2	carwmbB0426
Carg00555	Bhi03G000593	Wax gourd	carwgoB0488

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00555	Carg07929	Silver-seed gourd	carcarB425

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00555	Melon (DHL92) v3.6.1	carmedB0414
Carg00555	Silver-seed gourd	carcarB189
Carg00555	Silver-seed gourd	carcarB370
Carg00555	Silver-seed gourd	carcarB422
Carg00555	Cucumber (Gy14) v2	carcgybB0413
Carg00555	Cucumber (Gy14) v1	carcgyB0472
Carg00555	Cucurbita maxima (Rimu)	carcmaB0560
Carg00555	Cucurbita maxima (Rimu)	carcmaB0564
Carg00555	Cucurbita moschata (Rifu)	carcmoB0547
Carg00555	Cucurbita moschata (Rifu)	carcmoB0549
Carg00555	Cucurbita pepo (Zucchini)	carcpeB0559
Carg00555	Cucurbita pepo (Zucchini)	carcpeB0561
Carg00555	Cucurbita pepo (Zucchini)	carcpeB0575
Carg00555	Wild cucumber (PI 183967)	carcpiB0441
Carg00555	Cucumber (Chinese Long) v3	carcucB0438
Carg00555	Bottle gourd (USVL1VR-Ls)	carlsiB368
Carg00555	Melon (DHL92) v3.5.1	carmeB0410
Carg00555	Watermelon (Charleston Gray)	carwcgB0395
Carg00555	Watermelon (97103) v1	carwmB0398
Carg00555	Watermelon (97103) v2	carwmbB0427