CmoCh07G002950 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAGAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAGAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA ATGAGTTTTGTTCTTGTTAAGAGGTCTAATGGTTACTCCAAGGTTGATAAAGAAGACCCAGATGAGATAATTCATCGAAGAGCACAGTTTATAATCAACAGAGTGTTGGAACGAGCAGATTCCATGGGCAAAGCTTCGTATCTGAGAATTAGAATCCGAAGACTAAGAGTTAGATTTGGAAGAAGATTGAAGAAGCTGAAGAAGAGTATTTGCAATGTCAAGATTAGTGTTTACAAGCAAATAATCTGTCAGATCAGAAACTGCAAGTCTTTGTTTGGCAGAAAAGCAACCAACTTCGCCAATCTACCTCCTCTCTTACCATAA
BLAST of CmoCh07G002950 vs. TrEMBL
Match: A0A0A0KJX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G514800 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.0e-39 Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TrEMBL
Match: A0A0D2QI53_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G178000 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.8e-21 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TrEMBL
Match: M5WJH3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018445mg PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.0e-20 Identity = 54/107 (50.47%), Postives = 81/107 (75.70%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TrEMBL
Match: A0A061GFQ7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030210 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.8e-20 Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TrEMBL
Match: A0A061GAZ8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_028700 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19 Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TAIR10
Match: AT4G04745.1 (AT4G04745.1 unknown protein) HSP 1 Score: 68.2 bits (165), Expect = 3.6e-12 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TAIR10
Match: AT4G21902.1 (AT4G21902.1 unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 3.4e-10 Identity = 38/112 (33.93%), Postives = 70/112 (62.50%), Query Frame = 1
BLAST of CmoCh07G002950 vs. TAIR10
Match: AT1G11655.1 (AT1G11655.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 4.4e-10 Identity = 30/70 (42.86%), Postives = 52/70 (74.29%), Query Frame = 1
BLAST of CmoCh07G002950 vs. NCBI nr
Match: gi|778720450|ref|XP_011658155.1| (PREDICTED: uncharacterized protein LOC105435949 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 4.2e-39 Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 1
BLAST of CmoCh07G002950 vs. NCBI nr
Match: gi|659078924|ref|XP_008439979.1| (PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-36 Identity = 84/110 (76.36%), Postives = 92/110 (83.64%), Query Frame = 1
BLAST of CmoCh07G002950 vs. NCBI nr
Match: gi|1009108397|ref|XP_015884531.1| (PREDICTED: uncharacterized protein LOC107420152 [Ziziphus jujuba]) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of CmoCh07G002950 vs. NCBI nr
Match: gi|823230653|ref|XP_012448049.1| (PREDICTED: uncharacterized protein LOC105771183 [Gossypium raimondii]) HSP 1 Score: 109.4 bits (272), Expect = 4.0e-21 Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 1
BLAST of CmoCh07G002950 vs. NCBI nr
Match: gi|595882861|ref|XP_007212680.1| (hypothetical protein PRUPE_ppa018445mg [Prunus persica]) HSP 1 Score: 105.5 bits (262), Expect = 5.8e-20 Identity = 54/107 (50.47%), Postives = 81/107 (75.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |