CmoCh07G000920 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCCATCGTTCGTCTTCGTCTCTTTCCCCGCGGTGTTGTGGTGATCAAAGTTCGGATATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGGTATGCGGCTTTCTGAAAGATCTTGGTGTGAATACTGGAATTTCTTTTGTTCTTTGAATTAGAGCTTCTACTTCTAGAGGCTCTGTAATCCGTTCTTTTAAGATCTTTTTGCTTGTGTTGAACCTTGATTTTACTTGATTAAGCTTCGGAAATGCTTGTTGTTTTGTTTCTTTTCTTAATTGATTTTTCTCATCATATATATTTGTCTCAATTTAATTTTGTATTTCTGGTTGTTGAGAAACTAATTTTGGCTCATTGTTTCATGTTCAATGTTTCTGAAAAATTAAACTAGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGGTCTTCTTCTCTGAATTTCAATCTTCTCATTTGACTTTCAACCCCTAAAAAGAGAATCAATGGAAAGAAAGTTACGTGTAATGTTAACTAGTTTATACTCATATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGAGGCATAAAATGCTAAGGAAGCATTTTATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGAGGCATAAAATGCTAAGGAAGCATTTTATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGTGGCATAAAATGCTAAGGAAGCAACCTTGTGTATATGTTATCCTTGTGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGAAATCCATAATCAAATCTGGAGCAAAGGCTAGAAGGTTAAGTTTGTTCATAACTTAAAAAATATAACCCGATTGGGATTTAGTGGAAGAACAAAGAGGAATCTGCTAAAACCGTCCGATAATAACAAGATTGTTCTTCGCGTTGCAATTCATCAAAGGAAAGTTGTTGATGGGTCGATCTTCCAAGTAGAAGCTACCGTTTATATGAGGTTAGATGTTAATAATCTACATTCTCTCCAATGCTTTAATTACTATGACTACCATCTCATTTCTTATGTATGGATTAGTTGATAGTTTACTTCGCAGTAGTTTTTGTTCCATTTAGGAAGTTTAAGAATTCTTAATGAGAAATTATCCCTTTAAACGAGGATTCTAAGTGGGGTATTAACCATTTAAATGAGGATTCATGGTGGAGAGTCCGACCTCGACGGATTTTTTAGAAAATAGCTATTATTTGTGTATGGAATTGAATGATTCCGCACAAAATTCTCTGTTTTTGGCCGCACCTTAATGAAAACCGCAAACTCCCCAAACCATCCATGGCCTCAAATCCTAATCGCCCGAGTCAAGGTCCTTCCATGGCTGCCTTCAACAAAACCATAGACCATTCACAACCCAAAATTCCAATCTCCTTCAGAATCTGAAGCGAAAACAAGGATTTGGGTCCAAATCCTCGAACTCCTTTAATGGCTACAATCCCATATCTTCCCTATCGACGCCTTTGATTTTGAATCCCACAACAATGGACAGCCCACCACCACCACCACCAACACCACCAACAACAACAGAGGCTAATAAGCTTCTGAACGTATCCTCTTTGAAGCTCTCCCGGCACTCCAGCACCAGAGATTCCGACGGCAGCGATGACCTCCGGTATACCAGCCTGAAGGACGTTCTCCTGAACTCACCGTCGTACAGCGGCGTAAATGACTTCAATGAGTTCAGTTCTCCGAACATTTCGATCCGAAATGAGCTGGTGAAAAGGGCGGCGTCGGCATACCTTCAATCGGCGGCGACTTTAGTCAGCCGGAATGAGAGCTGCATCGTGGGATTCTGGGGGAGGCTACGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTAATTTTTTCCATAACATTTTTGGCTTCTTTACTTTTGCTCTAGACTGAAACACCACCACTTTTCGATCCATTTTCGATTCATTTTTTCTACATGTATGTTCTAATTGT TCGCCATCGTTCGTCTTCGTCTCTTTCCCCGCGGTGTTGTGGTGATCAAAGTTCGGATATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGAAATCCATAATCAAATCTGGAGCAAAGGCTAGAAGGTTAAGTTTGTTCATAACTTAAAAAATATAACCCGATTGGGATTTAGTGGAAGAACAAAGAGGAATCTGCTAAAACCGTCCGATAATAACAAGATTGTTCTTCGCGTTGCAATTCATCAAAGGAAAGTTGTTGATGGGTCGATCTTCCAAGTAGAAGCTACCGTTTATATGAGGTTAGATGTTAATAATCTACATTCTCTCCAATGCTTTAATTACTATGACTACCATCTCATTTCTTATGTATGGATTAGTTGATAGTTTACTTCGCAGTAGTTTTTGTTCCATTTAGGAAGTTTAAGAATTCTTAATGAGAAATTATCCCTTTAAACGAGGATTCTAAGTGGGGTATTAACCATTTAAATGAGGATTCATGGTGGAGAGTCCGACCTCGACGGATTTTTTAGAAAATAGCTATTATTTGTGTATGGAATTGAATGATTCCGCACAAAATTCTCTGTTTTTGGCCGCACCTTAATGAAAACCGCAAACTCCCCAAACCATCCATGGCCTCAAATCCTAATCGCCCGAGTCAAGGTCCTTCCATGGCTGCCTTCAACAAAACCATAGACCATTCACAACCCAAAATTCCAATCTCCTTCAGAATCTGAAGCGAAAACAAGGATTTGGGTCCAAATCCTCGAACTCCTTTAATGGCTACAATCCCATATCTTCCCTATCGACGCCTTTGATTTTGAATCCCACAACAATGGACAGCCCACCACCACCACCACCAACACCACCAACAACAACAGAGGCTAATAAGCTTCTGAACGTATCCTCTTTGAAGCTCTCCCGGCACTCCAGCACCAGAGATTCCGACGGCAGCGATGACCTCCGGTATACCAGCCTGAAGGACGTTCTCCTGAACTCACCGTCGTACAGCGGCGTAAATGACTTCAATGAGTTCAGTTCTCCGAACATTTCGATCCGAAATGAGCTGGTGAAAAGGGCGGCGTCGGCATACCTTCAATCGGCGGCGACTTTAGTCAGCCGGAATGAGAGCTGCATCGTGGGATTCTGGGGGAGGCTACGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTAATTTTTTCCATAACATTTTTGGCTTCTTTACTTTTGCTCTAGACTGAAACACCACCACTTTTCGATCCATTTTCGATTCATTTTTTCTACATGTATGTTCTAATTGT ATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGA
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: HLP_ARATH (50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana GN=HLP PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61 Identity = 132/174 (75.86%), Postives = 146/174 (83.91%), Query Frame = 1
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: HLL_ARATH (50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana GN=HLL PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47 Identity = 118/195 (60.51%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICBR (50S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) GN=rplN PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 7.8e-32 Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICB8 (50S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) GN=rplN PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 7.8e-32 Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICTY (50S ribosomal protein L14 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=rplN PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.0e-31 Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0A0LME7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401350 PE=3 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.9e-77 Identity = 154/165 (93.33%), Postives = 161/165 (97.58%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0A0KIN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524020 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 2.8e-76 Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0D2UMB5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G046200 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.2e-74 Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A061E8L1_THECC (Ribosomal protein L14p/L23e family protein isoform 1 OS=Theobroma cacao GN=TCM_011271 PE=3 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 4.9e-73 Identity = 149/165 (90.30%), Postives = 155/165 (93.94%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0R0FA21_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G105500 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.0e-71 Identity = 143/165 (86.67%), Postives = 150/165 (90.91%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TAIR10
Match: AT5G46160.1 (AT5G46160.1 Ribosomal protein L14p/L23e family protein) HSP 1 Score: 236.1 bits (601), Expect = 1.6e-62 Identity = 132/174 (75.86%), Postives = 146/174 (83.91%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TAIR10
Match: AT1G17560.1 (AT1G17560.1 Ribosomal protein L14p/L23e family protein) HSP 1 Score: 190.3 bits (482), Expect = 9.8e-49 Identity = 118/195 (60.51%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TAIR10
Match: ATCG00780.1 (ATCG00780.1 ribosomal protein L14) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23 Identity = 52/120 (43.33%), Postives = 82/120 (68.33%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TAIR10
Match: AT1G04480.1 (AT1G04480.1 Ribosomal protein L14p/L23e family protein) HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of CmoCh07G000920 vs. TAIR10
Match: AT2G33370.1 (AT2G33370.1 Ribosomal protein L14p/L23e family protein) HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|449441786|ref|XP_004138663.1| (PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 2.7e-77 Identity = 154/165 (93.33%), Postives = 161/165 (97.58%), Query Frame = 1
BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|659078224|ref|XP_008439613.1| (PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 295.8 bits (756), Expect = 4.7e-77 Identity = 154/165 (93.33%), Postives = 160/165 (96.97%), Query Frame = 1
BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|700194209|gb|KGN49413.1| (hypothetical protein Csa_6G524020 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 4.0e-76 Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1
BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|778721434|ref|XP_011658297.1| (PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 4.0e-76 Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1
BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|659078222|ref|XP_008439612.1| (PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 290.8 bits (743), Expect = 1.5e-75 Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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