CmoCh07G000920 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G000920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description50S ribosomal protein L14
LocationCmo_Chr07 : 557679 .. 560361 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCCATCGTTCGTCTTCGTCTCTTTCCCCGCGGTGTTGTGGTGATCAAAGTTCGGATATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGGTATGCGGCTTTCTGAAAGATCTTGGTGTGAATACTGGAATTTCTTTTGTTCTTTGAATTAGAGCTTCTACTTCTAGAGGCTCTGTAATCCGTTCTTTTAAGATCTTTTTGCTTGTGTTGAACCTTGATTTTACTTGATTAAGCTTCGGAAATGCTTGTTGTTTTGTTTCTTTTCTTAATTGATTTTTCTCATCATATATATTTGTCTCAATTTAATTTTGTATTTCTGGTTGTTGAGAAACTAATTTTGGCTCATTGTTTCATGTTCAATGTTTCTGAAAAATTAAACTAGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGGTCTTCTTCTCTGAATTTCAATCTTCTCATTTGACTTTCAACCCCTAAAAAGAGAATCAATGGAAAGAAAGTTACGTGTAATGTTAACTAGTTTATACTCATATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGAGGCATAAAATGCTAAGGAAGCATTTTATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGAGGCATAAAATGCTAAGGAAGCATTTTATGCATGAGCATAGGCGGTAAGAAAAGAATCTCATTGTTTATAAACTGAATTTTTGCTTGCTTATGCACATGTTCATGTTTACTCAAGAGGAAAATTAATAATGTGAAGAGAGATTGAAATTTTTGAATCATTGCAAGTGGCATAAAATGCTAAGGAAGCAACCTTGTGTATATGTTATCCTTGTGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGAAATCCATAATCAAATCTGGAGCAAAGGCTAGAAGGTTAAGTTTGTTCATAACTTAAAAAATATAACCCGATTGGGATTTAGTGGAAGAACAAAGAGGAATCTGCTAAAACCGTCCGATAATAACAAGATTGTTCTTCGCGTTGCAATTCATCAAAGGAAAGTTGTTGATGGGTCGATCTTCCAAGTAGAAGCTACCGTTTATATGAGGTTAGATGTTAATAATCTACATTCTCTCCAATGCTTTAATTACTATGACTACCATCTCATTTCTTATGTATGGATTAGTTGATAGTTTACTTCGCAGTAGTTTTTGTTCCATTTAGGAAGTTTAAGAATTCTTAATGAGAAATTATCCCTTTAAACGAGGATTCTAAGTGGGGTATTAACCATTTAAATGAGGATTCATGGTGGAGAGTCCGACCTCGACGGATTTTTTAGAAAATAGCTATTATTTGTGTATGGAATTGAATGATTCCGCACAAAATTCTCTGTTTTTGGCCGCACCTTAATGAAAACCGCAAACTCCCCAAACCATCCATGGCCTCAAATCCTAATCGCCCGAGTCAAGGTCCTTCCATGGCTGCCTTCAACAAAACCATAGACCATTCACAACCCAAAATTCCAATCTCCTTCAGAATCTGAAGCGAAAACAAGGATTTGGGTCCAAATCCTCGAACTCCTTTAATGGCTACAATCCCATATCTTCCCTATCGACGCCTTTGATTTTGAATCCCACAACAATGGACAGCCCACCACCACCACCACCAACACCACCAACAACAACAGAGGCTAATAAGCTTCTGAACGTATCCTCTTTGAAGCTCTCCCGGCACTCCAGCACCAGAGATTCCGACGGCAGCGATGACCTCCGGTATACCAGCCTGAAGGACGTTCTCCTGAACTCACCGTCGTACAGCGGCGTAAATGACTTCAATGAGTTCAGTTCTCCGAACATTTCGATCCGAAATGAGCTGGTGAAAAGGGCGGCGTCGGCATACCTTCAATCGGCGGCGACTTTAGTCAGCCGGAATGAGAGCTGCATCGTGGGATTCTGGGGGAGGCTACGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTAATTTTTTCCATAACATTTTTGGCTTCTTTACTTTTGCTCTAGACTGAAACACCACCACTTTTCGATCCATTTTCGATTCATTTTTTCTACATGTATGTTCTAATTGT

mRNA sequence

TCGCCATCGTTCGTCTTCGTCTCTTTCCCCGCGGTGTTGTGGTGATCAAAGTTCGGATATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGAAATCCATAATCAAATCTGGAGCAAAGGCTAGAAGGTTAAGTTTGTTCATAACTTAAAAAATATAACCCGATTGGGATTTAGTGGAAGAACAAAGAGGAATCTGCTAAAACCGTCCGATAATAACAAGATTGTTCTTCGCGTTGCAATTCATCAAAGGAAAGTTGTTGATGGGTCGATCTTCCAAGTAGAAGCTACCGTTTATATGAGGTTAGATGTTAATAATCTACATTCTCTCCAATGCTTTAATTACTATGACTACCATCTCATTTCTTATGTATGGATTAGTTGATAGTTTACTTCGCAGTAGTTTTTGTTCCATTTAGGAAGTTTAAGAATTCTTAATGAGAAATTATCCCTTTAAACGAGGATTCTAAGTGGGGTATTAACCATTTAAATGAGGATTCATGGTGGAGAGTCCGACCTCGACGGATTTTTTAGAAAATAGCTATTATTTGTGTATGGAATTGAATGATTCCGCACAAAATTCTCTGTTTTTGGCCGCACCTTAATGAAAACCGCAAACTCCCCAAACCATCCATGGCCTCAAATCCTAATCGCCCGAGTCAAGGTCCTTCCATGGCTGCCTTCAACAAAACCATAGACCATTCACAACCCAAAATTCCAATCTCCTTCAGAATCTGAAGCGAAAACAAGGATTTGGGTCCAAATCCTCGAACTCCTTTAATGGCTACAATCCCATATCTTCCCTATCGACGCCTTTGATTTTGAATCCCACAACAATGGACAGCCCACCACCACCACCACCAACACCACCAACAACAACAGAGGCTAATAAGCTTCTGAACGTATCCTCTTTGAAGCTCTCCCGGCACTCCAGCACCAGAGATTCCGACGGCAGCGATGACCTCCGGTATACCAGCCTGAAGGACGTTCTCCTGAACTCACCGTCGTACAGCGGCGTAAATGACTTCAATGAGTTCAGTTCTCCGAACATTTCGATCCGAAATGAGCTGGTGAAAAGGGCGGCGTCGGCATACCTTCAATCGGCGGCGACTTTAGTCAGCCGGAATGAGAGCTGCATCGTGGGATTCTGGGGGAGGCTACGGATCAAACTCGCCGCCCTCCGTTCCCGTTGGTGTAATTTTTTCCATAACATTTTTGGCTTCTTTACTTTTGCTCTAGACTGAAACACCACCACTTTTCGATCCATTTTCGATTCATTTTTTCTACATGTATGTTCTAATTGT

Coding sequence (CDS)

ATGGCTGCTGCTTCTTTTGCTTCCAAGTGTTCCCGCGTTGGTCGTTCATTATTGGGTGGACTTGGAAACATTTTGTCTGGTTCATTGAGCTCATCAAGTGAGACAGTATGCAGCAGTTTCATTTCGCAGCAACAAAGAACTTTCATACAGATGAGGACTGTGCTCAAAGTAGTGGATAACTCAGGGGCAAAGAAAGTGATGTGCATACAAGCATTGAAGGGGAAGAAAGGAGCACGACTGGGAGACACGATCGTCGCATCCGTGAAGGAAGCCCATCCAAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGAGTGGTTGTTCGAGCTGCAATGCAAAAAGGTCGTTGTGATGGGAGCGAGGTCAAGTTTGATGATAATGCTGTAGTATTTGTTGATAAGCAAGGCCAACCTATTGGGACAAGAGTGTTTGGCCCAGTTCCTCATGAACTCAGGAAGAAAAAACACGTAAAGATTCTTACTTTGGCGGAGCACATTGCTTGA
BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: HLP_ARATH (50S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana GN=HLP PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61
Identity = 132/174 (75.86%), Postives = 146/174 (83.91%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQ--RTFIQMRTVLKVVDN 62
           AA+FAS+ +R GRSLLGGL N   GS++SS+  +  S +SQQQ  RTFIQM TVLKVVDN
Sbjct: 2   AAAFASRLTRGGRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVDN 61

Query: 63  SGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS 122
           SGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQ+GR DGS
Sbjct: 62  SGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGS 121

Query: 123 EVKFDDNAVVFVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           EV+FDDNAVV VD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 122 EVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: HLL_ARATH (50S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana GN=HLL PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 118/195 (60.51%), Postives = 139/195 (71.28%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCS-SFISQQQ-RTFIQMRTVLKVVDN 62
           A + ASK S+ GRSLLGGL N  SG ++SSS  + + S +SQQQ RTFIQM T+LK VDN
Sbjct: 2   ATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVDN 61

Query: 63  SGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVVV 122
           S AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVVV
Sbjct: 62  SCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVV 121

Query: 123 RAAMQKGRCDGSEVKFDDNAVVFV---DKQG--------------QPIGTRVFGPVPHEL 167
           RAAM KGR DGS+VKFDDNA+V V   +K+G              QP GTRVFGPVPHE+
Sbjct: 122 RAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHEM 181

BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICBR (50S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) GN=rplN PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-32
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 108
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 109 VVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 167
           +VR      R DGS +KFD NA+V ++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICB8 (50S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) GN=rplN PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-32
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 108
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMVAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 109 VVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 167
           +VR      R DGS +KFD NA+V ++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRADGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

BLAST of CmoCh07G000920 vs. Swiss-Prot
Match: RL14_RICTY (50S ribosomal protein L14 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=rplN PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-31
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQALKGKKG--ARLGDTIVASVKEAHPNGKVKKGKVVYGV 108
           IQM+++L+V DNSGAKKVMCI+ L G     A+LGD IV S+KEA P GKVKKG V  GV
Sbjct: 2   IQMQSILEVADNSGAKKVMCIKVLGGSHHMMAKLGDVIVVSIKEAIPGGKVKKGDVYKGV 61

Query: 109 VVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 167
           +VR      R DGS +KFD NA+V ++KQ +PIGTRVFGPV  ELR KK+V+I++LAE +
Sbjct: 62  IVRTKTGVVRSDGSTIKFDKNALVLLNKQDEPIGTRVFGPVTRELRAKKYVRIMSLAEEV 121

BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0A0LME7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401350 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.9e-77
Identity = 154/165 (93.33%), Postives = 161/165 (97.58%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           A++FASK SRVGRSLLGGLGN LSGSL++S+ETVC+SFI+QQQRTFIQMRTVLKVVDNSG
Sbjct: 2   ASAFASKFSRVGRSLLGGLGNNLSGSLTTSNETVCNSFITQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQK RCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKDRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0A0KIN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524020 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.8e-76
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AA+FASK SRV RSLLGGLGN LS  L++S E++CSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 88  AAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQQQRTFIQMRTVLKVVDNSG 147

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 148 AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 207

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 208 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 252

BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0D2UMB5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G046200 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-74
Identity = 148/165 (89.70%), Postives = 156/165 (94.55%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           A +FAS+CSRVGRSL+GGLGN LS   S+SSE  CSSF+SQQQRTFIQMRTVLKVVDNSG
Sbjct: 2   AVTFASRCSRVGRSLMGGLGNNLSNLRSTSSEITCSSFLSQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTI+ASVKEA PNGKVKKGKVVYGVVVRAAMQ+GRCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIIASVKEAMPNGKVKKGKVVYGVVVRAAMQRGRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELR+KKHVKILTLAEHIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAEHIA 166

BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A061E8L1_THECC (Ribosomal protein L14p/L23e family protein isoform 1 OS=Theobroma cacao GN=TCM_011271 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-73
Identity = 149/165 (90.30%), Postives = 155/165 (93.94%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AASFASKCSRVGRSLLGGLGN LSG  S+S+E V ++  SQQQRTFIQMRTVLKVVDNSG
Sbjct: 2   AASFASKCSRVGRSLLGGLGNNLSGLQSASNEVVGNNVWSQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKGKVVYGVVVRAAMQ+GRCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGKVVYGVVVRAAMQRGRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELR KKHVKILTLA+HIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRNKKHVKILTLAKHIA 166

BLAST of CmoCh07G000920 vs. TrEMBL
Match: A0A0R0FA21_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G105500 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.0e-71
Identity = 143/165 (86.67%), Postives = 150/165 (90.91%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AA+FAS+CSRVGRSL GGL N   G  +SS    C++  SQQQRTFIQMRTVLKVVDNSG
Sbjct: 2   AAAFASRCSRVGRSLSGGLSNSSPGLFTSSHGMTCNNLFSQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTI+ASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELR+KKHVKILTLA HIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166

BLAST of CmoCh07G000920 vs. TAIR10
Match: AT5G46160.1 (AT5G46160.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-62
Identity = 132/174 (75.86%), Postives = 146/174 (83.91%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQ--RTFIQMRTVLKVVDN 62
           AA+FAS+ +R GRSLLGGL N   GS++SS+  +  S +SQQQ  RTFIQM TVLKVVDN
Sbjct: 2   AAAFASRLTRGGRSLLGGLNN--GGSMNSSNGMMNESILSQQQQRRTFIQMGTVLKVVDN 61

Query: 63  SGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS 122
           SGAKKVMCIQALKGKKGARLGDTIVASVKEA PNGKVKKG VVYGVVVRAAMQ+GR DGS
Sbjct: 62  SGAKKVMCIQALKGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGRVDGS 121

Query: 123 EVKFDDNAVVFVDKQG-------QPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           EV+FDDNAVV VD +        QPIGTRVFGPVPHELRKKKH+KIL LA+H+A
Sbjct: 122 EVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKILALAQHVA 173

BLAST of CmoCh07G000920 vs. TAIR10
Match: AT1G17560.1 (AT1G17560.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 190.3 bits (482), Expect = 9.8e-49
Identity = 118/195 (60.51%), Postives = 139/195 (71.28%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCS-SFISQQQ-RTFIQMRTVLKVVDN 62
           A + ASK S+ GRSLLGGL N  SG ++SSS  + + S +SQQQ RTFIQM T+LK VDN
Sbjct: 2   ATALASKLSK-GRSLLGGLCNAFSGLMNSSSNGMMNGSILSQQQHRTFIQMGTILKCVDN 61

Query: 63  SGAKKVMCIQALKGKKGARLGDTIVASVKEAH------------PNGKVKKGKVVYGVVV 122
           S AK+VMCIQ+L+GKKGARLGD IV SVKEA+            P GKVKKG VVYGVVV
Sbjct: 62  SCAKEVMCIQSLRGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPKGKVKKGMVVYGVVV 121

Query: 123 RAAMQKGRCDGSEVKFDDNAVVFV---DKQG--------------QPIGTRVFGPVPHEL 167
           RAAM KGR DGS+VKFDDNA+V V   +K+G              QP GTRVFGPVPHE+
Sbjct: 122 RAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQPTGTRVFGPVPHEM 181

BLAST of CmoCh07G000920 vs. TAIR10
Match: ATCG00780.1 (ATCG00780.1 ribosomal protein L14)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 52/120 (43.33%), Postives = 82/120 (68.33%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGV 108
           IQ +T L V DNSGA+++MCI+ +    ++ A +GD IVA +KEA PN  +++ +V+  V
Sbjct: 2   IQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAV 61

Query: 109 VVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHI 167
           +VR   +  R +G+ +++DDNA V +D++G P GTRVFG +P ELR+    KI++LA  +
Sbjct: 62  IVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEV 121

BLAST of CmoCh07G000920 vs. TAIR10
Match: AT1G04480.1 (AT1G04480.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQALKGKKG-------ARLGDTIVASVKEAHPNGKVKKGK 108
           + +   +   DN+GAK +  I ++KG KG       A +GD ++A+VK+  P+    + K
Sbjct: 20  LPVAATVNCADNTGAKNLYII-SVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKK 79

Query: 109 VVYGVVVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHE 151
           V+  V+VR      R DG  + F+DNA V V+ +G+  G+ + GP+  E
Sbjct: 80  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

BLAST of CmoCh07G000920 vs. TAIR10
Match: AT2G33370.1 (AT2G33370.1 Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 1

Query: 49  IQMRTVLKVVDNSGAKKVMCIQALKGKKG-------ARLGDTIVASVKEAHPNGKVKKGK 108
           + +   +   DN+GAK +  I ++KG KG       A +GD ++A+VK+  P+    + K
Sbjct: 20  LPVAATVNCADNTGAKNLYII-SVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKK 79

Query: 109 VVYGVVVRAAMQKGRCDGSEVKFDDNAVVFVDKQGQPIGTRVFGPVPHE 151
           V+  V+VR      R DG  + F+DNA V V+ +G+  G+ + GP+  E
Sbjct: 80  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124

BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|449441786|ref|XP_004138663.1| (PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 2.7e-77
Identity = 154/165 (93.33%), Postives = 161/165 (97.58%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           A++FASK SRVGRSLLGGLGN LSGSL++S+ETVC+SFI+QQQRTFIQMRTVLKVVDNSG
Sbjct: 2   ASAFASKFSRVGRSLLGGLGNNLSGSLTTSNETVCNSFITQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQK RCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKDRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|659078224|ref|XP_008439613.1| (PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 4.7e-77
Identity = 154/165 (93.33%), Postives = 160/165 (96.97%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AA+FASK SRV RSLLGGLGN LS SL++S+ET+CSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 2   AAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 62  AKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|700194209|gb|KGN49413.1| (hypothetical protein Csa_6G524020 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.0e-76
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AA+FASK SRV RSLLGGLGN LS  L++S E++CSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 88  AAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQQQRTFIQMRTVLKVVDNSG 147

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 148 AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 207

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 208 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 252

BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|778721434|ref|XP_011658297.1| (PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.0e-76
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQQQRTFIQMRTVLKVVDNSG 62
           AA+FASK SRV RSLLGGLGN LS  L++S E++CSSFISQQQRTFIQMRTVLKVVDNSG
Sbjct: 2   AAAFASKFSRVSRSLLGGLGNNLSTLLTASKESICSSFISQQQRTFIQMRTVLKVVDNSG 61

Query: 63  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 122
           AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV
Sbjct: 62  AKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEV 121

Query: 123 KFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           KFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 122 KFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 166

BLAST of CmoCh07G000920 vs. NCBI nr
Match: gi|659078222|ref|XP_008439612.1| (PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 1.5e-75
Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 1

Query: 3   AASFASKCSRVGRSLLGGLGNILSGSLSSSSETVCSSFISQ--QQRTFIQMRTVLKVVDN 62
           AA+FASK SRV RSLLGGLGN LS SL++S+ET+CSSFISQ  QQRTFIQMRTVLKVVDN
Sbjct: 2   AAAFASKFSRVSRSLLGGLGNNLSTSLTTSNETICSSFISQLQQQRTFIQMRTVLKVVDN 61

Query: 63  SGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS 122
           SGAKKVMCIQ+LKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS
Sbjct: 62  SGAKKVMCIQSLKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGS 121

Query: 123 EVKFDDNAVVFVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168
           EVKFDDNAVV VDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA
Sbjct: 122 EVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAEHIA 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HLP_ARATH2.8e-6175.8650S ribosomal protein HLP, mitochondrial OS=Arabidopsis thaliana GN=HLP PE=2 SV=... [more]
HLL_ARATH1.7e-4760.5150S ribosomal protein HLL, mitochondrial OS=Arabidopsis thaliana GN=HLL PE=2 SV=... [more]
RL14_RICBR7.8e-3260.0050S ribosomal protein L14 OS=Rickettsia bellii (strain RML369-C) GN=rplN PE=3 SV... [more]
RL14_RICB87.8e-3260.0050S ribosomal protein L14 OS=Rickettsia bellii (strain OSU 85-389) GN=rplN PE=3 ... [more]
RL14_RICTY1.0e-3160.0050S ribosomal protein L14 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) ... [more]
Match NameE-valueIdentityDescription
A0A0A0LME7_CUCSA1.9e-7793.33Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401350 PE=3 SV=1[more]
A0A0A0KIN2_CUCSA2.8e-7692.73Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524020 PE=3 SV=1[more]
A0A0D2UMB5_GOSRA1.2e-7489.70Uncharacterized protein OS=Gossypium raimondii GN=B456_011G046200 PE=3 SV=1[more]
A0A061E8L1_THECC4.9e-7390.30Ribosomal protein L14p/L23e family protein isoform 1 OS=Theobroma cacao GN=TCM_0... [more]
A0A0R0FA21_SOYBN2.0e-7186.67Uncharacterized protein OS=Glycine max GN=GLYMA_18G105500 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G46160.11.6e-6275.86 Ribosomal protein L14p/L23e family protein[more]
AT1G17560.19.8e-4960.51 Ribosomal protein L14p/L23e family protein[more]
ATCG00780.11.9e-2343.33ATCG00780.1 ribosomal protein L14[more]
AT1G04480.14.2e-0733.03 Ribosomal protein L14p/L23e family protein[more]
AT2G33370.14.2e-0733.03 Ribosomal protein L14p/L23e family protein[more]
Match NameE-valueIdentityDescription
gi|449441786|ref|XP_004138663.1|2.7e-7793.33PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus][more]
gi|659078224|ref|XP_008439613.1|4.7e-7793.33PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X2 [Cucumis melo][more]
gi|700194209|gb|KGN49413.1|4.0e-7692.73hypothetical protein Csa_6G524020 [Cucumis sativus][more]
gi|778721434|ref|XP_011658297.1|4.0e-7692.73PREDICTED: 50S ribosomal protein HLP, mitochondrial [Cucumis sativus][more]
gi|659078222|ref|XP_008439612.1|1.5e-7592.22PREDICTED: 60S ribosomal protein L14, mitochondrial isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000218Ribosomal_L14P
IPR005745Ribosomal_L14P_bac-type
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000920.1CmoCh07G000920.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3DG3DSA:2.40.150.20coord: 42..166
score: 1.5
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 48..167
score: 23
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 11..167
score: 4.5E
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 49..166
score: 1.3
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 48..167
score: 3.4
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 49..166
score: 1.31
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMsTIGR01067TIGR01067coord: 49..166
score: 5.6
NoneNo IPR availablePANTHERPTHR11761:SF12PROTEIN HUELLENLOScoord: 11..167
score: 4.5E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G000920CmoCh03G014100Cucurbita moschata (Rifu)cmocmoB459