CmoCh07G000870 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G000870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAtp-dependent RNA helicase
LocationCmo_Chr07 : 530810 .. 537155 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTGGAAGTTCTGTTTCTGTCTAAAACCCTAGCGCTGCAGGGTTTTTGATTCGGAAGCTTTGTTTGTGAGACAATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGGCAGTTTCCTCTTTCTTCCTACTCATTTGAACTTTCAATCTGGTCTATGGCTTCAAATTTACTTCTATTACTTCTATTTGATATTCATCATATATAGCAATCCGTTGGATGCAAGTGAATCTACTGTTGGTTGTCTCTTCGAAGATTTGGCGAGTAGTAAAATGTTGTTTACGTTTAAAAGAGCACAGGCCTAATAGTAATATATATATATGTGAATTGTATCGATGGCAATTGAATGTTCGCTTATTCCTGTATTGCTTAGATTATGCTCCATATGTTTAGATTATCAAGTTTTATATTCTTGTATCGATCTCTTCCTCAAGGGTCGATTTTTAACGGTTTTTTTTTTTTTATGATAATTTTGTTTCCTTTTCTAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTATTTTTATTGCCATTACTTTTTTTTGTATGCATAAATTCATGTTACAAGTTTCCGGTTTATTGGTTTGAAGTGCACTATTTTAGTATAACGTAGGTTCATTCTAAAATCTGTCCAAGAACCTTGACAATGAAATAATAAAATATGAAAATGAGAGCAGACTTCTTTTTCTGGTTTTTGGATTGACTCTCACCTGCTTAGCATTCTAATATGAATACGTGCTTATTTTAGAAGAAAATTTTCTTCATGTTCTTATTGGGTCATGGCTCTCTTTAACAAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCAGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTAAGTACTCATAGTGTTGTTATAACCGCAGATTTGTAGCTACATTTATATTGGAGGAGGCTTAATGCTGATGCCATATGCAGTGGTGAATGTCTTTTGAAAAAGAGATATACTGTGTTAAGTGGTGAATGTCTTTTAATGTATATTTGTTCTCATTACAGAAACTATACGTTTCACAGCCTGCAAGTGTTTCTTATTAAATACGCTGATTGAACTATAGCCTAAATCAGTATTTCTTTATTAGTATGAAAATTAATCTTTAAAAATCAATATAGCTGTGATGGGTGATTGAGCCTACTTAATTTCTTTTCTCGGTGAATTTTTCTCTATTGTTGATTGTATCCTGCTCAGTGCACACCAAAACAAAACTTCCTATCTATTTATTGAGTCTACTTCTTGTCTTACTTCATCTTGAAGTCATCTCTCACCTCCTTTTTGTAATTATAGTTTATCTACCCTACAATCTTAATGGAGATGTTTTTCGTGATTATCTTCGATAGGACTATCTTTTGTATCTATTTCATACATCAATGAAATGGTTTCTGTTTCCCATAAAAAATGTTGTTATATTTTGAATTGTTAGCCTATGTCTACAGTTTTATGGAGAGCTCACCACCCTCTCGAATTGGTATGCTGTTGTGCATTGTTATTCTGAATATTGAAGTAATCTCATTGTGAGGAGAAACCTTAAAGATTATTTACCAAAATTTGAGCTATTGTTGTCTCAATACAATCTGTTGATGAGATATGTGATTTCAGGTTATCGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCATAAGAAGATTGTAAGTTCTAACTTCTCGTAATTATGGTTATACTTTTGAAGTATTGTACATAATTGTTATTACTAATCCTCCTAATCATTTTTATCTCTGACACATTTTGGTTTTCTCAAAATGTCCTGTGGTATAAAACTGTAGTCCTGATTGCAGATACTGTTGAATTAATGCAGTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGGTAAATTGGCTTGTCTCATAATTAATCTGGGATTGAATCAATTTTTGGGTGCTCGTTTAGAAAGGAAAAAGTGTATGCTTAACCATAGAAATGGGACACCCTTGATCTTAGAAGGGGATTTCACTGACCTTGGGATTTGGATGCCATTTGTCTTAAACAATCGTACTTGTTGATTGTTGACAACAGGATACTAGGAGATATATTTCCCAACTGTTAAGTTTGCTTCGTTTCATGTCCATCGTCAATTTCCATAATGATAGATCCTATAATTATTGGTTCTATTTATATCTTTTATATCTTCTTGTTGTATCAAAAAAGTTACTGTTCCATGTGAAGAAACGTTATGATACACAACTCAGTCTATATAATTTTCTTTCTTTCTTTTCCTTTTTCTTATAGAATTTTTTAAGCCTTTTATCCGTACCTTCCCTATTACCTGATGTTAAACCAGATCACTAAATTTTTTGTCTTGGCTTCTCTTAGACCTTAGTCAATGGCCGATACCATGACATTTGGACAATGATGATAAAGGGGATAATGTTTCATAAGCTTTGTTTACATAGTTAATACTTCTTTATCAACCTTTTAGTTTCAAATTGTTTCTTCGCAGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCAAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGGTAACACAGGAAGATTGTTTTTTAGCTTAAGTGTGTTCTTCCCCATTTAAGTATTGCCAGAAGTAATTGAAGCATGTGAAATATGAAGCCTAAGACTTCTCTTATTTTCTTGGACTATGGTTCATGGACTTCATAGTCAGCCCTACTTGTTTTCTTTGCTACAAGCTTCCGACATAAGAAATTATAATGTTATAATGTAGAATACTGCTTCAGATTATTCTACAATTAAATGTGGACCAGGTCTGTTTCGTAGAGTGTTTTCTTTTTACTGGAAAATGCTGATATATGTGTATGAAAATCTGTCTTTAATTGACACTCTTTAGCTGACTTTACATCGATGAGCATTTTTGTCCCATGGAGATCATCACTTTATGGGTTGCTGTATGTACCATTTATCATTTTAATCTCTGGACATGTTCATATTTGAGCATAACACAGTTTTGCTTTCATTCTCTCTGCTGTTCATTATATTTCGATACCTGGTGTTTAAATTGACATATGTTCTGCAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGTGTAAAGATGAGGTATTTTATGCTCAAGCCTCCATGATTAAATTATATTATTAACATACATAACTTGCAATTAATTCTTCTGTAAGTCTATGCCTTAATCAGCCATGAATTGACTTTATTTCTTCACTTTTGTCCTCGGGCTGCCATCTGGGTTAACACGATTTCATCTATGTAGTTGTCATGTACATATAATACAACAGTAATACTATTTTACCTTGGGCTTTATACAATGCTATGGTAATGCATAAACCATAAGGAAATACTTACTGGTTCGTAATTTAGTTAGAAGGTGAAATCCTGTTTGGTTTGAGCTTTCTTCGTTTCTGATTGAAAATGATAATGTTGAATAGTTGAGCTATATATCGTAGTCCAACTTGCTTATCCTTAGGTTCTTATGTTTCAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGGTAACACGTCATCTCTTTTGATTATTCAGTAAAAACTGCCTTATCTAGCTGAAGTAATTGAAGTTGTTAGGCCCCATAATTTTGTTAGAAAAGGGAATAGGTTAAACTTTAAAAACCGAATTCCTTTGTTTTGTGCATCAAATCTACATTGCTGTTTCCACATTATCCAAATGTAAAGAAGGCAGGATTAATTTGTTGGGAGGACGTGTTGTTTTCAATGAAGCTGATGCATAAATAAATAAATAATATTCTTTTTTTTTTTTTTTTTCATGTAAATGGTTTCTAAATGTTTTGTTCATTTTGATTCCTAATGATTAACAGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGGTTGGTATTAACAATCAAGCTTCTCTGAGAGAGTAAAGTCCCATTTTGTAATTTATGAAAAACAACTTGAATTGCTAGCTGTGTTGGGAAAGATTAAATGGCAGGCGTGATTTAATGTTTATCCGTAGCGTAAAACAAAAACACCACTACTTAATCTTCCTTGTTCCTTTGACTAATCTGCATTGAAACTAATTGACTGAAAGACAGTATTCTTAAGCATTAGAACATTACAAAATCCTCATTAAACTCGACTAATTATACATATGGTTTCATTACAGTCTTAGCAAGTTCACTGGAAACTGTGCAAGTACAAATTTCCGGGACTCGGCCCACAAGGACATGAAAATTTAACTACAGGAGATGGTGATAGTGCCTTTAAGGCTTATTATTTTCACTCGAGATTACAAATTCAATTATTCAATGTGGAGAAAGATCTATTTATGTTTCTAACGAAGTACCTAGAATTGGCACTAACAGTTGTAGGAGCAGGGGTAGTTGATGGTGATGGACTTATTGGGGAAGCAGGATACTCATACTTGCTACAGTCTCTCTCCTCTTCACTGATGGTGTCCAGCACTTTCGACGTCCGGCGTCTCATGACACTGATGATCTGTGGTGGCGCAACTTCAGTAACAAACCTTGCTATTCGGGAATTCGCCATTTTCTTTTTCTTTTTTGGAGTTTAAGGTGTTGGAGGATGATGGTTGAGAATGTTGATGTTCTAGGAGCACAGATTGGACTACTTAAGAGTGAATGCAAGCTTTTGAGTGATATTCGCGATGGTCTGCTTAGATTATGAATTGAATGCAAGTCCTGATCCAGGGGATTCCTTGAAATCAATAATTTGGCATTAGGTGGTGTAGCATAGTACAACGACCACTGATATTTTTCTTTTTTTATGCAGTTTTCAAACGTCTGATTTCTTTCCCCGACCTTCTAGGGGATTTAACTTGTGGTATTTGGAGGTATAGTCCAAAAATTGCTGGGGCCGATGGCTTTTGCATTTGCCCTCTTAGAAGATTTAACTATGATTGGCAAATCCACTTGCCACGTTTCTAAACTTTTTGGCCGATTGTATGTTGATGCTGACAAATTGTCTTGTCAGTTACTACATTGTGCGAAACATTCTGACAAGTGTCAGAAGCTTCATGGTACAGGATTGCTGAACGAATTGAACAACAATATTTATTGATGTTGGGAAGATACCGAGATCCCATCGGGATATAAAATATCTATATTGAATTATTGGTCTGTTGAAGATTTTATTTCCCTTTTTTATCTGGAAAGGAAAACGTGTAGTTCATGAAATTCAA

mRNA sequence

GGTTGGAAGTTCTGTTTCTGTCTAAAACCCTAGCGCTGCAGGGTTTTTGATTCGGAAGCTTTGTTTGTGAGACAATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCAGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTTATCGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCATAAGAAGATTTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCAAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGTGTAAAGATGAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGTCTTAGCAAGTTCACTGGAAACTGTGCAAGTACAAATTTCCGGGACTCGGCCCACAAGGACATGAAAATTTAACTACAGGAGATGGTGATAGTGCCTTTAAGGCTTATTATTTTCACTCGAGATTACAAATTCAATTATTCAATGTGGAGAAAGATCTATTTATGTTTCTAACGAAGTACCTAGAATTGGCACTAACAGTTGTAGGAGCAGGGGTAGTTGATGGTGATGGACTTATTGGGGAAGCAGGATACTCATACTTGCTACAGTCTCTCTCCTCTTCACTGATGGTGTCCAGCACTTTCGACGTCCGGCGTCTCATGACACTGATGATCTGTGGTGGCGCAACTTCAGTAACAAACCTTGCTATTCGGGAATTCGCCATTTTCTTTTTCTTTTTTGGAGTTTAAGGTGTTGGAGGATGATGGTTGAGAATGTTGATGTTCTAGGAGCACAGATTGGACTACTTAAGAGTGAATGCAAGCTTTTGAGTGATATTCGCGATGGTCTGCTTAGATTATGAATTGAATGCAAGTCCTGATCCAGGGGATTCCTTGAAATCAATAATTTGGCATTAGGTGGTGTAGCATAGTACAACGACCACTGATATTTTTCTTTTTTTATGCAGTTTTCAAACGTCTGATTTCTTTCCCCGACCTTCTAGGGGATTTAACTTGTGGTATTTGGAGGTATAGTCCAAAAATTGCTGGGGCCGATGGCTTTTGCATTTGCCCTCTTAGAAGATTTAACTATGATTGGCAAATCCACTTGCCACGTTTCTAAACTTTTTGGCCGATTGTATGTTGATGCTGACAAATTGTCTTGTCAGTTACTACATTGTGCGAAACATTCTGACAAGTGTCAGAAGCTTCATGGTACAGGATTGCTGAACGAATTGAACAACAATATTTATTGATGTTGGGAAGATACCGAGATCCCATCGGGATATAAAATATCTATATTGAATTATTGGTCTGTTGAAGATTTTATTTCCCTTTTTTATCTGGAAAGGAAAACGTGTAGTTCATGAAATTCAA

Coding sequence (CDS)

ATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCAGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTTATCGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCATAAGAAGATTTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCAAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGTGTAAAGATGAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGTCTTAG
Homology
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BLAST of CmoCh07G000870 vs. Swiss-Prot
Match: RH1_ARATH (DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana GN=RH1 PE=2 SV=3)

HSP 1 Score: 701.0 bits (1808), Expect = 9.3e-201
Identity = 352/494 (71.26%), Postives = 414/494 (83.81%), Query Frame = 1 

Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           ++ K +   V+PWMR+PVDVS  E C L+ LP L+P+LK AL+NMGISSLFPVQ+AVW E
Sbjct: 5   KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+CLRALVVLPTRDLALQVK+VF
Sbjct: 65  TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
            AIAPAVGLSVG AVGQSSIA EI+ LIK PKL+AGICYDP+D S  L+S+VDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS-L 242
           RLMDHIN TKGFTL+HLRYLV+DETDRLLRE+YQSWLPTVLQLT   D++ +FPS+T  +
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDS-LFPSFTPFV 244

Query: 243 PCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 302
           P + GSL+T+RR  +ERGFKG  YPR  KMVLSATLTQDP KL QLDLH PLF+TTG  R
Sbjct: 245 PSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 304

Query: 303 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 362
           Y+LPEKLE    ICE+ +KP+YLVALL+S  GEKCI+FTSSVE+T RLC LLNFF D ++
Sbjct: 305 YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 364

Query: 363 KIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 422
           K KEYSG   QSLRSK L AFR G++QVLV+SDA+TRGMDV+GV NVINYDMP F KT+I
Sbjct: 365 KAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 424

Query: 423 HRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 482
           HRAGRTARAGQ+GRCFTLL   EVRRF KLL+K  +DSCP++ +P +S++ ++ TY  AL
Sbjct: 425 HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPAL 484

Query: 483 EKLKEKVESERSRK 496
           EKLKE VESE  +K
Sbjct: 485 EKLKELVESEAPKK 497

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BLAST of CmoCh07G000870 vs. Swiss-Prot
Match: RH1_ORYSJ (DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica GN=Os02g0795900 PE=2 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 5.9e-179
Identity = 317/502 (63.15%), Postives = 388/502 (77.29%), Query Frame = 1 

Query: 10  IPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSF 69
           +P LPWMR+PVD+  F  CP+  LP LDPRL   LQ MGI S FPVQ+A W E IGPG+F
Sbjct: 18  VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77

Query: 70  ERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFAAIAPAV 129
           ERD+CINSPTGSGKTLAYALPIVQML++R V+CLRALVVLPTRDLALQVKEVF AIAP V
Sbjct: 78  ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 137

Query: 130 GLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHIN 189
           GLSVG AVGQSSIADE++ LI++ K       D E   ++ Q+ VDILVATPGRLMDHI+
Sbjct: 138 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 197

Query: 190 FTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLK 249
            TKGF+L+HL+YLV+DETDR+LRE+YQSWLPTV+QLT   D+N  +            L 
Sbjct: 198 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG-ETLLHPLT 257

Query: 250 TIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRYKLPEKLE 309
           TIRR G+ERGFKG  +PR +K+VLSATLTQDP KL+QL+L  PL L +GK+RY++P KL+
Sbjct: 258 TIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQ 317

Query: 310 SYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSGL 369
           SY  +C+S LKPL L+ LLQ L GEKC+VFTSSVES+HRL TLL FF+DL  K  EYS L
Sbjct: 318 SYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRL 377

Query: 370 QRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTAR 429
           QR+S R KTL+AF+ G++ VL+ +D M RG+ ++G+R VINYDMP ++KTYIHRAGRTAR
Sbjct: 378 QRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTAR 437

Query: 430 AGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVE 489
           AG+SG CFT L K EV+ F K+L+KADN SC +HSLP  S+E L+P + SAL+KL+E +E
Sbjct: 438 AGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESLE 497

Query: 490 SERSRKSTI--MSSRVGKRKDT 510
           SE ++KS     +    KRK T
Sbjct: 498 SEATKKSKSGDKAPNASKRKRT 518

[Close]
BLAST of CmoCh07G000870 vs. Swiss-Prot
Match: DDX51_HUMAN (ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3)

HSP 1 Score: 311.6 bits (797), Expect = 1.6e-83
Identity = 198/524 (37.79%), Postives = 290/524 (55.34%), Query Frame = 1 

Query: 3   EKQKRKSIPVLP-WMRSP--VDVSLFEEC-PLEILPSLDPRLKAALQNMGISSLFPVQLA 62
           +++  K  P LP W+  P  V  ++ E+  P+E +P + P L+  L+  GISS FPVQ A
Sbjct: 168 KRKAPKVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAA 227

Query: 63  VWQEA---------IGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVV 122
           V             +G G +   DLC+++PTGSGKTLA+ +P+VQ L SR V  +RALVV
Sbjct: 228 VIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVV 287

Query: 123 LPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSV 182
           LPT++LA QV +VF     A  L V L  GQ S+A E   L+++              + 
Sbjct: 288 LPTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKT-------------AD 347

Query: 183 QLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHV 242
             +   DI+VATPGRL+DHI+ T GF+LQ LR+L+IDE DR++   +QSWLP V+     
Sbjct: 348 GYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQ 407

Query: 243 DDENIIFPSYTSLPCSAGSLKTIRRFGIERGFKGACYPRF--SKMVLSATLTQDPGKLAQ 302
            ++        + PC+       RR          C P+    K++ SATLTQ+P KL Q
Sbjct: 408 SED-------PADPCALLQ----RRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQ 467

Query: 303 LDLHRPLFLTTG--------------KRRYKLPEKLESYMTICESKLKPLYLVALLQSLG 362
           L LH+P   +TG                +Y  P  L  +   C    KPL ++ L+  +G
Sbjct: 468 LGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMG 527

Query: 363 GEKCIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVS 422
             + + FT+S E++HRL  L+  F  +   + E+S       R   L  F  G++Q+L+S
Sbjct: 528 FSRVLCFTNSRENSHRLFLLVQAFGGVD--VAEFSSRYGPGQRRMILKQFEQGKIQLLIS 587

Query: 423 SDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLCKDEVRRFKKLL 482
           +DA  RG+DV+GV  V+NYD P +++TY+HR GRTARAG++G+ FTLL K + RRF ++L
Sbjct: 588 TDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRML 647

Query: 483 QKADNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRKS 497
            +A       H L S  ++ L P Y  AL +L+E V+ ER +++
Sbjct: 648 TEAGAPELQRHELSSKLLQPLVPRYEEALSQLEESVKEERKQRA 665

[Close]
BLAST of CmoCh07G000870 vs. Swiss-Prot
Match: DDX51_MOUSE (ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 6.9e-79
Identity = 191/518 (36.87%), Postives = 283/518 (54.63%), Query Frame = 1 

Query: 11  PVLP-WMRSP--VDVSLFEEC-PLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEA--- 70
           P LP W+  P  V  S+ E+  P+E +P + P L+  L+  GI+S FPVQ AV       
Sbjct: 148 PFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPALLES 207

Query: 71  ------IGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLAL 130
                 IG G ++  DLC+++PTGSGKTLA+ +P+VQ L  R V  +RALVVLPT++LA 
Sbjct: 208 ADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKELAQ 267

Query: 131 QVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDI 190
           QV +VF        L V L  GQ S+A E   L+++              +   +   DI
Sbjct: 268 QVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQKT-------------ADGFRCLADI 327

Query: 191 LVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFP 250
           +VATPGRL+DHI+ T GF+LQ LR+L+IDE DR++   +QSWLP V+             
Sbjct: 328 VVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAF--------- 387

Query: 251 SYTSLPCSAGSLKTIRRFGIER-GFKGACYPRF--SKMVLSATLTQDPGKLAQLDLHRPL 310
            Y+  P   GS   ++R   +       C P+    K++ SATLTQDP KL +L L++P 
Sbjct: 388 -YSEGP--TGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPR 447

Query: 311 FLTT---------------GKRRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIV 370
             +T                  +Y  P  L  +   C    KPL ++ L+  +   + + 
Sbjct: 448 LFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALC 507

Query: 371 FTSSVESTHRLCTLLNFFDDLQLKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTR 430
           FT+S E++HRL  L   F  +   + E+S       R K L  F  G++Q+L+S+DA  R
Sbjct: 508 FTNSRENSHRLYLLAQAFGGVS--VAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATAR 567

Query: 431 GMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADND 490
           G+DV+GV  VINYD P +++TY+HR GRTARAG++G+ FTLL K + R+F +++ +A   
Sbjct: 568 GIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVP 627

Query: 491 SCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRKS 497
               H +P   ++ L   Y +AL +L++ V+ E+  K+
Sbjct: 628 ELTHHEIPRKLLQPLVARYETALSQLEKTVKEEQKLKA 638

[Close]
BLAST of CmoCh07G000870 vs. Swiss-Prot
Match: DDX51_DANRE (ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 5.9e-78
Identity = 191/520 (36.73%), Postives = 272/520 (52.31%), Query Frame = 1 

Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEE----CPLEILPSLDPRLKAALQNMGISSLFPVQLA 62
           EK  +K   VLP   S  DV   +      P+  +P + P L   LQ  GI S FPVQ  
Sbjct: 159 EKDVQKVKRVLPQWLSQPDVIQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQAE 218

Query: 63  VWQEA---------IGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVV 122
           V             +GPG +  RD+C+++PTGSGKTLA+ +P+VQ LS R V+ +RAL V
Sbjct: 219 VIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAV 278

Query: 123 LPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSV 182
           LPT++LA QV  VF+A      L V +  GQ S A E   L    ++  G+ +       
Sbjct: 279 LPTKELAQQVSNVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH------- 338

Query: 183 QLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHV 242
              S  DI+VATPGRL+DHIN    F+LQHLR+L+IDE DR++   +QSWL  V +  + 
Sbjct: 339 ---SMADIVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYS 398

Query: 243 ---DDENIIFPSYTSLPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLA 302
              +    +F      P +A SL   +                 K++ SATLTQ+P KL 
Sbjct: 399 TPGETHTSVFRRTVPGPITAASLSPPQI-------------PLQKLLFSATLTQNPEKLQ 458

Query: 303 QLDLHRP-LFLTT---------GKRRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEK 362
            LDLH+P LF +T          +  +  P+ L  Y   C    KPL ++  L  L    
Sbjct: 459 LLDLHQPRLFSSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSP 518

Query: 363 CIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDA 422
            + FT+S E  HRL  L+  F  ++  + E+S       R KTL  F  G++ +L+S+DA
Sbjct: 519 ALCFTNSREGAHRLYLLVKLFGGVE--VAEFSSKLSPGERQKTLKDFEKGKIPLLISTDA 578

Query: 423 MTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKA 482
             RG+D+ GV+ VINYD P +I+TYIHR GRTARAG++G  FT L K + +RF K++  A
Sbjct: 579 AARGIDINGVKCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLKVQEKRFLKMVSDA 638

Query: 483 DNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRK 496
            +       +   +++ ++  Y   L +L   V+ E  +K
Sbjct: 639 GSPGIQKQHVHPEALKSMESRYEQVLAELGTIVKEENEKK 650

[Close]
BLAST of CmoCh07G000870 vs. TrEMBL
Match: A0A0A0KNZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524090 PE=4 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 9.2e-264
Identity = 471/517 (91.10%), Postives = 490/517 (94.78%), Query Frame = 1 

Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M +KQKRK IPVLPWMRSPVDVSL EECPLEILP LD RLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MADKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSF+RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDP+DF V+LQSSVDILVAT
Sbjct: 121 VFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRE+YQSWLPTVLQLTH DD +IIFPSY S
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYIS 240

Query: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
            PCS GSLKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Sbjct: 241 NPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLC+LLNFF+DL+
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLE 360

Query: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           LKIKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGV+NVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEV+RFKKLLQKADNDSCPVH+LPSSSIE LQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTI-MSSRVGKRKDTNSSNEKS 517
           LEKLKEKVESE SRKSTI  SSR GK+KD NSS  K+
Sbjct: 481 LEKLKEKVESETSRKSTITSSSRAGKQKDRNSSKAKT 517

[Close]
BLAST of CmoCh07G000870 vs. TrEMBL
Match: V4SN06_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025380mg PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 2.5e-229
Identity = 412/515 (80.00%), Postives = 454/515 (88.16%), Query Frame = 1 

Query: 2   VEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQ 61
           +E+ K+KS+PVLPWMRSPVDVSLFE+CPL+ LP LDPRLK ALQNMGISSLFPVQ+AVWQ
Sbjct: 1   MEEAKKKSVPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60

Query: 62  EAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEV 121
           E IGPG FERDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRALVVLPTRDLALQVK+V
Sbjct: 61  ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120

Query: 122 FAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATP 181
           FAAIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPED   +LQS+VDILVATP
Sbjct: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180

Query: 182 GRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSL 241
           GRLMDHIN T+GFTL+HL YLV+DETDRLLRE+YQ+WLPTVLQLT  D+EN    + T L
Sbjct: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240

Query: 242 PCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 301
           P + GSLKTIRR G+ERGFK   YPR  KMVLSATLTQDP KLAQLDLH PLFLTTG+ R
Sbjct: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300

Query: 302 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 361
           YKLPE+LESY  ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLCTLLN F +L++
Sbjct: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360

Query: 362 KIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 421
           KIKEYSGLQRQS+RSKTL AFR G++QVLVSSDAMTRGMDVEGV NV+NYD PA+IKTYI
Sbjct: 361 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 420

Query: 422 HRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 481
           HRAGRTARAGQ GRCFTLL KDEV+RFKKLLQKADNDSCP+HS+PSS IE L+P Y SAL
Sbjct: 421 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSAL 480

Query: 482 EKLKEKVESERSRKSTI--MSSRVGKRKDTNSSNE 515
           +KLKE VESE  RK TI    SR+GK + T  + +
Sbjct: 481 DKLKETVESEAHRKHTIGFKLSRMGKGRVTGHAKQ 515

[Close]
BLAST of CmoCh07G000870 vs. TrEMBL
Match: W9R784_9ROSA (DEAD-box ATP-dependent RNA helicase 1 OS=Morus notabilis GN=L484_011439 PE=4 SV=1)

HSP 1 Score: 795.4 bits (2053), Expect = 4.1e-227
Identity = 405/514 (78.79%), Postives = 447/514 (86.96%), Query Frame = 1 

Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           +K+K++ + VLPWMRSPVDVSLFEECPL ++P LDPRLK ALQNMG +SLFPVQ+AVWQE
Sbjct: 4   QKEKQEKVLVLPWMRSPVDVSLFEECPLSLVPCLDPRLKVALQNMGFASLFPVQVAVWQE 63

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPGSFERDLC+NSPTGSGKTLAYALPIVQ LS+R VKCLRALVVLPTRDLALQVKE+F
Sbjct: 64  TIGPGSFERDLCVNSPTGSGKTLAYALPIVQALSTRAVKCLRALVVLPTRDLALQVKEIF 123

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
           + IAPAVGLSVGLAVGQSSIADEI+ L+KRPKLEAGICYDPEDFS+ L SSVDILVATPG
Sbjct: 124 SVIAPAVGLSVGLAVGQSSIADEISELVKRPKLEAGICYDPEDFSLGLPSSVDILVATPG 183

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLP 242
           RLMDHIN TKGFTL+HL YLV+DETDRLLRE+YQSWLPTVL LT  +DE     ++T LP
Sbjct: 184 RLMDHINSTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLHLTRFNDEGFFPRAHTFLP 243

Query: 243 CSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRY 302
            S GSLKTIRR G+ERGFKG  YPR  K+VLSATLTQDP KL+QL LH PLFLTTGKRRY
Sbjct: 244 SSLGSLKTIRRSGVERGFKGKPYPRLVKIVLSATLTQDPSKLSQLALHHPLFLTTGKRRY 303

Query: 303 KLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLK 362
           +LPEKLESY  +CE+KLKPLYLVALLQ LGGEKCIVFTSSVESTHRLCTLLNFFDDL   
Sbjct: 304 QLPEKLESYKLMCETKLKPLYLVALLQKLGGEKCIVFTSSVESTHRLCTLLNFFDDLPFI 363

Query: 363 IKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIH 422
           IKEYSGLQRQS+RSKTL  FR G++QVLVSSDAMTRGMDVEGV+ VINYDMP +IKTYIH
Sbjct: 364 IKEYSGLQRQSVRSKTLKGFREGQIQVLVSSDAMTRGMDVEGVKYVINYDMPVYIKTYIH 423

Query: 423 RAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALE 482
           RAGRTARAGQ+GRCFTLL KDE + FKKLLQKADN+SCP +++PSSSIE +   Y SALE
Sbjct: 424 RAGRTARAGQAGRCFTLLSKDEAKHFKKLLQKADNNSCPGYAVPSSSIESMHSIYTSALE 483

Query: 483 KLKEKVESE--RSRKSTIMSSRVGKRKDTNSSNE 515
           KLKE VE E  + RK    SSRVGKR  T+ S E
Sbjct: 484 KLKETVEMEAYQKRKMGFKSSRVGKRSGTHPSKE 517

[Close]
BLAST of CmoCh07G000870 vs. TrEMBL
Match: B9H0T9_POPTR (DEAD/DEAH box helicase family protein OS=Populus trichocarpa GN=POPTR_0004s16530g PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 7.6e-226
Identity = 399/503 (79.32%), Postives = 448/503 (89.07%), Query Frame = 1 

Query: 5   QKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAI 64
           ++ K++PVLPWMRSPVDVS FEE PL+ILP LDPRLK ALQNMG  +LFPVQ+AVWQE I
Sbjct: 8   KQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETI 67

Query: 65  GPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFAA 124
           GPG+FERDLCINSPTGSGKTLAYALPIVQ+LS+R VKCLRALVVLPTRDLALQVK+VFAA
Sbjct: 68  GPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAA 127

Query: 125 IAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRL 184
           IAPA+GLSVGLAVGQSSIADEI+ LIK+P+ EAGICYDP+D   +LQSSVDILVATPGRL
Sbjct: 128 IAPAMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRL 187

Query: 185 MDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCS 244
           MDHI  TKGFTL+HL YLV+DETDRLLRESYQSWLPTVL+LT   DE+++      LPC+
Sbjct: 188 MDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCA 247

Query: 245 AGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRYKL 304
           +GSLKTIRR G+ERGFKG  YPR +KMVLSATLTQDP KLAQL+LH PLFLTTG+RRY+L
Sbjct: 248 SGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQL 307

Query: 305 PEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLKIK 364
           PEKLESY  IC SKLKPLYLVA+LQ LGGEKCIVFTSSVESTHRLCTLLNFF DL++KIK
Sbjct: 308 PEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIK 367

Query: 365 EYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRA 424
           EYSGLQRQS+RSKTL AFR GE+QVLVSSDAMTRGMD+EGVRN+INYDMPA++KTY+HRA
Sbjct: 368 EYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRA 427

Query: 425 GRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALEKL 484
           GRTARAGQ+GRC TLL   EV+RFKKLLQKADNDSCP++S+PSSS++ L P Y+SALEKL
Sbjct: 428 GRTARAGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFYLSALEKL 487

Query: 485 KEKVESERSRKST--IMSSRVGK 506
           KE V+SE SRK    I  SRV K
Sbjct: 488 KETVQSETSRKGKVGIKFSRVSK 510

[Close]
BLAST of CmoCh07G000870 vs. TrEMBL
Match: D7TKB7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04000 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 3.2e-224
Identity = 401/516 (77.71%), Postives = 444/516 (86.05%), Query Frame = 1 

Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M E +++K++PVLPWMRSP+DVSLFEECPL + P LDPRL+ AL+NMG SSLFPVQ+AVW
Sbjct: 1   MKEAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QE +GPG+FERDLCINSPTGSGKTLAYALPIV +LSSR VKCLRALVVLPTRDLALQVKE
Sbjct: 61  QETVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQ+SIADEI+ LIKRPKLEAGICYDPED S++LQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHIN TKGFTL+HLRYLV+DETDRLLRE+YQSWLPTVLQLT   DE++     T 
Sbjct: 181 PGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTI 240

Query: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LP + GS+ TIRR G+ERGFKG  YPR  K+VLSATLTQDP KLA LDLH PL LT G+R
Sbjct: 241 LPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RY+LPEKL+S+  ICESKLKPLYLVALL+ LGGEKCIVFTSSVES HRLCTLLNFF DLQ
Sbjct: 301 RYQLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQ 360

Query: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           +KI EYSGLQ Q +RSKTL  FRGG++QVL+SSD MTRGMDVEGVRNVINYD+P FIKTY
Sbjct: 361 IKIGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQ+GRCFTLL KDE +RFK+LLQKAD+DSCPVHS+ S+SIE L   YVSA
Sbjct: 421 IHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSA 480

Query: 481 LEKLKEKVESE--RSRKSTIMSSRVGKRKDTNSSNE 515
           LEKLKE V SE  R RK    SS   KRK      E
Sbjct: 481 LEKLKETVVSETTRKRKINFKSSGADKRKQEKHLKE 516

[Close]
BLAST of CmoCh07G000870 vs. TAIR10
Match: AT4G15850.1 (AT4G15850.1 RNA helicase 1)

HSP 1 Score: 701.0 bits (1808), Expect = 5.3e-202
Identity = 352/494 (71.26%), Postives = 414/494 (83.81%), Query Frame = 1 

Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           ++ K +   V+PWMR+PVDVS  E C L+ LP L+P+LK AL+NMGISSLFPVQ+AVW E
Sbjct: 5   KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+CLRALVVLPTRDLALQVK+VF
Sbjct: 65  TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
            AIAPAVGLSVG AVGQSSIA EI+ LIK PKL+AGICYDP+D S  L+S+VDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS-L 242
           RLMDHIN TKGFTL+HLRYLV+DETDRLLRE+YQSWLPTVLQLT   D++ +FPS+T  +
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDS-LFPSFTPFV 244

Query: 243 PCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 302
           P + GSL+T+RR  +ERGFKG  YPR  KMVLSATLTQDP KL QLDLH PLF+TTG  R
Sbjct: 245 PSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 304

Query: 303 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 362
           Y+LPEKLE    ICE+ +KP+YLVALL+S  GEKCI+FTSSVE+T RLC LLNFF D ++
Sbjct: 305 YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 364

Query: 363 KIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 422
           K KEYSG   QSLRSK L AFR G++QVLV+SDA+TRGMDV+GV NVINYDMP F KT+I
Sbjct: 365 KAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 424

Query: 423 HRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 482
           HRAGRTARAGQ+GRCFTLL   EVRRF KLL+K  +DSCP++ +P +S++ ++ TY  AL
Sbjct: 425 HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPAL 484

Query: 483 EKLKEKVESERSRK 496
           EKLKE VESE  +K
Sbjct: 485 EKLKELVESEAPKK 497

[Close]
BLAST of CmoCh07G000870 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 159.5 bits (402), Expect = 5.7e-39
Identity = 135/457 (29.54%), Postives = 208/457 (45.51%), Query Frame = 1 

Query: 71  RDLCINSPTGSGKTLAYALPIVQML-----------SSRTVKCLRALVVLPTRDLALQVK 130
           +D+   + TGSGKT A+A+PI+Q L             R      A V+ PTR+LA+Q+ 
Sbjct: 47  KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106

Query: 131 EVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVA 190
           E F A+   + L   + VG      +   L KRP                      ++VA
Sbjct: 107 EQFEALGADISLRCAVLVGGIDRMQQTIALGKRPH---------------------VIVA 166

Query: 191 TPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYT 250
           TPGRL DH++ TKGF+L+ L+YLV+DE DRLL E ++  L  +L+   ++ +  +F    
Sbjct: 167 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLF---- 226

Query: 251 SLPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGK 310
               SA   K +R+                   L     ++P K+               
Sbjct: 227 ----SATMTKKVRK-------------------LQRACLRNPVKI------------EAA 286

Query: 311 RRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDL 370
            +Y   + L+       +K K  YLV +L  +     ++FT + + T  L  +L     L
Sbjct: 287 SKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLR---SL 346

Query: 371 QLKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKT 430
             +    SG   QS R   LN F+ GE  +LV +D  +RG+D+  V  VINYD+P   K 
Sbjct: 347 GFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKD 406

Query: 431 YIHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVS 490
           YIHR GRTARAG+SG   +L+ + E+  + + ++K      P +  P+   E+L     S
Sbjct: 407 YIHRVGRTARAGRSGVGISLVNQYELEWYIQ-IEKLIGKKLPEY--PAEEDEVL-----S 427

Query: 491 ALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 517
            LE++     +E  + S +     G RK     +E+S
Sbjct: 467 LLERV-----AEAKKLSAMNMKESGGRKRRGEDDEES 427

[Close]
BLAST of CmoCh07G000870 vs. TAIR10
Match: AT4G16630.1 (AT4G16630.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-37
Identity = 130/462 (28.14%), Postives = 207/462 (44.81%), Query Frame = 1 

Query: 14  PWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDL 73
           P+  +   VS   +  +E+  +L   L  A + +G     P+Q A    A+      RDL
Sbjct: 154 PFFSTVDGVSFHADTFMEL--NLSRPLLRACETLGYKKPTPIQAACIPLALTG----RDL 213

Query: 74  CINSPTGSGKTLAYALPIVQMLSSRT--VKCLRALVVLPTRDLALQVKEVFAAIAPAVGL 133
           C ++ TGSGKT A+ALP ++ L  R   V   R L++ PTR+LA+Q+  +   +A    +
Sbjct: 214 CASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDI 273

Query: 134 SVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFT 193
             GL VG  S+ ++                      V L+S  DI+VATPGR++DH+  +
Sbjct: 274 KCGLIVGGLSVREQ---------------------EVVLRSMPDIVVATPGRMIDHLRNS 333

Query: 194 KGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTI 253
               L  L  L++DE DRLL+  + + +  +++L     + ++F +          +K +
Sbjct: 334 MSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSA-----TMTEEVKEL 393

Query: 254 RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLT---TGKRRYKLPEKL 313
            +  + +  +               L+ DP         RP  LT      RR +   + 
Sbjct: 394 VKLSLNKPLR---------------LSADP------SARRPPGLTEEVVRIRRTREANQE 453

Query: 314 ESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSG 373
              +++C    K              K I+F+ + ++ HRL  L   F    LK  E  G
Sbjct: 454 AVLLSLCTRTFKS-------------KVIIFSGTKQAAHRLKIL---FGLAGLKAAELHG 513

Query: 374 LQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTA 433
              Q+ R  +L  FR  EV  L+++D   RG+D+ GV+ VINY  P  I +Y+HR GRTA
Sbjct: 514 NLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTA 545

Query: 434 RAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSI 471
           RAG+ G   T +  D  R   K++ K          +P  SI
Sbjct: 574 RAGREGYAVTFV-TDSDRSLLKVIAKKVGSKLKSRVIPEQSI 545

[Close]
BLAST of CmoCh07G000870 vs. TAIR10
Match: AT3G22310.1 (AT3G22310.1 putative mitochondrial RNA helicase 1)

HSP 1 Score: 139.4 bits (350), Expect = 6.1e-33
Identity = 125/446 (28.03%), Postives = 195/446 (43.72%), Query Frame = 1 

Query: 36  LDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQML 95
           + P +  AL+  GI  LFP+Q AV +    P    RD+   + TG+GKTLA+ +PI+  +
Sbjct: 123 ISPEIVKALKGRGIEKLFPIQKAVLE----PAMEGRDMIGRARTGTGKTLAFGIPIIDKI 182

Query: 96  SSRTVKCLRA-----LVVLPTRDLALQVKEVFAAIAPAVG---LSVGLAVGQSSIADEIA 155
                K  R      LV+ PTR+LA QV++ F   AP++    L  G  +GQ        
Sbjct: 183 IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMR----- 242

Query: 156 GLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDET 215
                                +L   +D+ V TPGR++D +       L  ++++V+DE 
Sbjct: 243 ---------------------ELNYGIDVAVGTPGRIIDLMK-RGALNLSEVQFVVLDEA 302

Query: 216 DRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTIRRFGIERGFKGACYPR 275
           D             +LQ+   +D  II      LP    S                    
Sbjct: 303 D------------QMLQVGFAEDVEIILQK---LPAKRQS-------------------- 362

Query: 276 FSKMVLSATLTQDPGKLAQLDLHRPLFLT-TGKRRYKLPEKLESYMTICESKLKPLYLVA 335
              M+ SAT+      L +  L+ PL +   G    KL + +  Y    +S  +   +  
Sbjct: 363 ---MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGP 422

Query: 336 LLQSLG-GEKCIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSGLQRQSLRSKTLNAFRGG 395
           L++  G G KCIVFT +     RL     F      K +   G   Q+ R +TL  FR G
Sbjct: 423 LVKEHGKGGKCIVFTQTKRDADRLA----FGLAKSYKCEALHGDISQAQRERTLAGFRDG 482

Query: 396 EVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLCKDEV 455
              +LV++D   RG+DV  V  VI+Y++P   +T++HR GRT RAG+ G    +  +D+ 
Sbjct: 483 NFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQT 492

Query: 456 RRFKKLLQKADNDSCPVHSLPSSSIE 472
           R  K + ++  +     + LPS ++E
Sbjct: 543 RAVKMIEKEVGS---RFNELPSIAVE 492

[Close]
BLAST of CmoCh07G000870 vs. TAIR10
Match: AT3G22330.1 (AT3G22330.1 putative mitochondrial RNA helicase 2)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-32
Identity = 125/446 (28.03%), Postives = 194/446 (43.50%), Query Frame = 1 

Query: 36  LDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQML 95
           + P +  AL + GI  LFP+Q AV +    P    RD+   + TG+GKTLA+ +PI+  +
Sbjct: 111 ISPEIVKALSSKGIEKLFPIQKAVLE----PAMEGRDMIGRARTGTGKTLAFGIPIIDKI 170

Query: 96  SSRTVKCLRA-----LVVLPTRDLALQVKEVFAAIAPAVG---LSVGLAVGQSSIADEIA 155
                K  R      LV+ PTR+LA QV++ F   AP++    L  G  +GQ        
Sbjct: 171 IKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMR----- 230

Query: 156 GLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDET 215
                                QL   VD+ V TPGR++D +       L  ++++V+DE 
Sbjct: 231 ---------------------QLDYGVDVAVGTPGRVIDLMK-RGALNLSEVQFVVLDEA 290

Query: 216 DRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTIRRFGIERGFKGACYPR 275
                         +LQ+   +D  II      LP                        +
Sbjct: 291 ------------DQMLQVGFAEDVEIILEK---LP-----------------------EK 350

Query: 276 FSKMVLSATLTQDPGKLAQLDLHRPLFLT-TGKRRYKLPEKLESYMTICESKLKPLYLVA 335
              M+ SAT+      L +  L+ PL +   G    KL + + +Y  I +S  +   +  
Sbjct: 351 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 410

Query: 336 LL-QSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLKIKEYSGLQRQSLRSKTLNAFRGG 395
           L+ +   G KCIVFT +     RL   L        K +   G   QS R +TL  FR G
Sbjct: 411 LVTEHAKGGKCIVFTQTKRDADRLSYALA----RSFKCEALHGDISQSQRERTLAGFRDG 470

Query: 396 EVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLCKDEV 455
              +LV++D   RG+DV  V  +I+Y++P   +T++HR GRT RAG+ G    +  +D+ 
Sbjct: 471 HFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQS 480

Query: 456 RRFKKLLQKADNDSCPVHSLPSSSIE 472
           R  K + ++  +       LPS ++E
Sbjct: 531 RAVKIIEREVGS---RFTELPSIAVE 480

[Close]
BLAST of CmoCh07G000870 vs. NCBI nr
Match: gi|659078198|ref|XP_008439599.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Cucumis melo])

HSP 1 Score: 917.9 bits (2371), Expect = 7.8e-264
Identity = 472/517 (91.30%), Postives = 488/517 (94.39%), Query Frame = 1 

Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M EKQKRK IPVLPWMRSPVDVSL EECPLEILP LD RLK ALQNMGISSLFPVQLAVW
Sbjct: 1   MAEKQKRKHIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKVALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSF+RDLCINSPTGSGKTLAYALPIVQMLSSRT+KCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTIKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPED  V LQSSVDILVAT
Sbjct: 121 VFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLVALQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTL+HLRYLVIDETDRLLRE+YQSWLPTVLQLTH DD +IIFPSY S
Sbjct: 181 PGRLMDHINFTKGFTLKHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYIS 240

Query: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
            PCSAGSLKTIRRFG+ERGFKG  YPR +KM+LSATLTQDPGKLAQLDLH PLFLTTGKR
Sbjct: 241 NPCSAGSLKTIRRFGVERGFKGKPYPRLAKMILSATLTQDPGKLAQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLC+LLNFF+DL+
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLE 360

Query: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           LKIKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGV+NVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEV+RFKKLLQKADNDSCPVHSLPSSSIE LQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHSLPSSSIEFLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTI-MSSRVGKRKDTNSSNEKS 517
           LEKLKEKVESE SRKSTI  SSR GKRKD NSS  KS
Sbjct: 481 LEKLKEKVESETSRKSTITYSSRAGKRKDRNSSKAKS 517

[Close]
BLAST of CmoCh07G000870 vs. NCBI nr
Match: gi|449433605|ref|XP_004134588.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Cucumis sativus])

HSP 1 Score: 917.1 bits (2369), Expect = 1.3e-263
Identity = 471/517 (91.10%), Postives = 490/517 (94.78%), Query Frame = 1 

Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M +KQKRK IPVLPWMRSPVDVSL EECPLEILP LD RLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MADKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSF+RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDP+DF V+LQSSVDILVAT
Sbjct: 121 VFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRE+YQSWLPTVLQLTH DD +IIFPSY S
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYIS 240

Query: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
            PCS GSLKTIRRFG+ERGFKG  YPR +KMVLSATLTQDPGKLAQLDLH PLFLTTGKR
Sbjct: 241 NPCSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLC+LLNFF+DL+
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLE 360

Query: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           LKIKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGV+NVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEV+RFKKLLQKADNDSCPVH+LPSSSIE LQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTI-MSSRVGKRKDTNSSNEKS 517
           LEKLKEKVESE SRKSTI  SSR GK+KD NSS  K+
Sbjct: 481 LEKLKEKVESETSRKSTITSSSRAGKQKDRNSSKAKT 517

[Close]
BLAST of CmoCh07G000870 vs. NCBI nr
Match: gi|567868807|ref|XP_006427025.1| (hypothetical protein CICLE_v10025380mg [Citrus clementina])

HSP 1 Score: 802.7 bits (2072), Expect = 3.6e-229
Identity = 412/515 (80.00%), Postives = 454/515 (88.16%), Query Frame = 1 

Query: 2   VEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQ 61
           +E+ K+KS+PVLPWMRSPVDVSLFE+CPL+ LP LDPRLK ALQNMGISSLFPVQ+AVWQ
Sbjct: 1   MEEAKKKSVPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60

Query: 62  EAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEV 121
           E IGPG FERDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRALVVLPTRDLALQVK+V
Sbjct: 61  ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120

Query: 122 FAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATP 181
           FAAIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPED   +LQS+VDILVATP
Sbjct: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATP 180

Query: 182 GRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSL 241
           GRLMDHIN T+GFTL+HL YLV+DETDRLLRE+YQ+WLPTVLQLT  D+EN    + T L
Sbjct: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240

Query: 242 PCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 301
           P + GSLKTIRR G+ERGFK   YPR  KMVLSATLTQDP KLAQLDLH PLFLTTG+ R
Sbjct: 241 PSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300

Query: 302 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 361
           YKLPE+LESY  ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLCTLLN F +L++
Sbjct: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360

Query: 362 KIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 421
           KIKEYSGLQRQS+RSKTL AFR G++QVLVSSDAMTRGMDVEGV NV+NYD PA+IKTYI
Sbjct: 361 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 420

Query: 422 HRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 481
           HRAGRTARAGQ GRCFTLL KDEV+RFKKLLQKADNDSCP+HS+PSS IE L+P Y SAL
Sbjct: 421 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSAL 480

Query: 482 EKLKEKVESERSRKSTI--MSSRVGKRKDTNSSNE 515
           +KLKE VESE  RK TI    SR+GK + T  + +
Sbjct: 481 DKLKETVESEAHRKHTIGFKLSRMGKGRVTGHAKQ 515

[Close]
BLAST of CmoCh07G000870 vs. NCBI nr
Match: gi|568822227|ref|XP_006465537.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 1 isoform X2 [Citrus sinensis])

HSP 1 Score: 799.3 bits (2063), Expect = 4.0e-228
Identity = 412/515 (80.00%), Postives = 453/515 (87.96%), Query Frame = 1 

Query: 2   VEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQ 61
           +E+ K+KS+PVLPWMRSPVDVSLFE+CPL+ LP LDPRLK ALQNMGISSLFPVQ+AVWQ
Sbjct: 1   MEEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ 60

Query: 62  EAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEV 121
           E IGPG FERDLCINSPTGSGKTL+YALPIVQ LS+R V+CLRALVVLPTRDLALQVK+V
Sbjct: 61  ETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDV 120

Query: 122 FAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATP 181
           FAAIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPED   +LQS+VDILVATP
Sbjct: 121 FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDLLQELQSAVDILVATP 180

Query: 182 GRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSL 241
           GRLMDHIN T+GFTL+HL YLV+DETDRLLRE+YQ+WLPTVLQLT  D+EN    + T L
Sbjct: 181 GRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFL 240

Query: 242 PCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 301
           P + GSLKTIRR G+ERGFK    PR  KMVLSATLTQDP KLAQLDLH PLFLTTG+ R
Sbjct: 241 PSAFGSLKTIRRCGVERGFKDKPNPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR 300

Query: 302 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 361
           YKLPE+LESY  ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLCTLLN F +L++
Sbjct: 301 YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRI 360

Query: 362 KIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 421
           KIKEYSGLQRQS+RSKTL AFR G++QVLVSSDAMTRGMDVEGV NV+NYD PA+IKTYI
Sbjct: 361 KIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYI 420

Query: 422 HRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 481
           HRAGRTARAGQ GRCFTLL KDEV+RFKKLLQKADNDSCPVHS+PSS IE L+P Y SAL
Sbjct: 421 HRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPVHSIPSSLIESLRPVYKSAL 480

Query: 482 EKLKEKVESERSRKSTI--MSSRVGKRKDTNSSNE 515
           +KLKE VESE  RK TI    SR+GK + T  + +
Sbjct: 481 DKLKETVESEAHRKRTIGFKLSRMGKGRVTGRAKQ 515

[Close]
BLAST of CmoCh07G000870 vs. NCBI nr
Match: gi|703076935|ref|XP_010090461.1| (DEAD-box ATP-dependent RNA helicase 1 [Morus notabilis])

HSP 1 Score: 795.4 bits (2053), Expect = 5.8e-227
Identity = 405/514 (78.79%), Postives = 447/514 (86.96%), Query Frame = 1 

Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           +K+K++ + VLPWMRSPVDVSLFEECPL ++P LDPRLK ALQNMG +SLFPVQ+AVWQE
Sbjct: 4   QKEKQEKVLVLPWMRSPVDVSLFEECPLSLVPCLDPRLKVALQNMGFASLFPVQVAVWQE 63

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPGSFERDLC+NSPTGSGKTLAYALPIVQ LS+R VKCLRALVVLPTRDLALQVKE+F
Sbjct: 64  TIGPGSFERDLCVNSPTGSGKTLAYALPIVQALSTRAVKCLRALVVLPTRDLALQVKEIF 123

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
           + IAPAVGLSVGLAVGQSSIADEI+ L+KRPKLEAGICYDPEDFS+ L SSVDILVATPG
Sbjct: 124 SVIAPAVGLSVGLAVGQSSIADEISELVKRPKLEAGICYDPEDFSLGLPSSVDILVATPG 183

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLP 242
           RLMDHIN TKGFTL+HL YLV+DETDRLLRE+YQSWLPTVL LT  +DE     ++T LP
Sbjct: 184 RLMDHINSTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLHLTRFNDEGFFPRAHTFLP 243

Query: 243 CSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRY 302
            S GSLKTIRR G+ERGFKG  YPR  K+VLSATLTQDP KL+QL LH PLFLTTGKRRY
Sbjct: 244 SSLGSLKTIRRSGVERGFKGKPYPRLVKIVLSATLTQDPSKLSQLALHHPLFLTTGKRRY 303

Query: 303 KLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLK 362
           +LPEKLESY  +CE+KLKPLYLVALLQ LGGEKCIVFTSSVESTHRLCTLLNFFDDL   
Sbjct: 304 QLPEKLESYKLMCETKLKPLYLVALLQKLGGEKCIVFTSSVESTHRLCTLLNFFDDLPFI 363

Query: 363 IKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIH 422
           IKEYSGLQRQS+RSKTL  FR G++QVLVSSDAMTRGMDVEGV+ VINYDMP +IKTYIH
Sbjct: 364 IKEYSGLQRQSVRSKTLKGFREGQIQVLVSSDAMTRGMDVEGVKYVINYDMPVYIKTYIH 423

Query: 423 RAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALE 482
           RAGRTARAGQ+GRCFTLL KDE + FKKLLQKADN+SCP +++PSSSIE +   Y SALE
Sbjct: 424 RAGRTARAGQAGRCFTLLSKDEAKHFKKLLQKADNNSCPGYAVPSSSIESMHSIYTSALE 483

Query: 483 KLKEKVESE--RSRKSTIMSSRVGKRKDTNSSNE 515
           KLKE VE E  + RK    SSRVGKR  T+ S E
Sbjct: 484 KLKETVEMEAYQKRKMGFKSSRVGKRSGTHPSKE 517

The following BLAST results are available for this feature:
BLAST of CmoCh07G000870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RH1_ARATH9.3e-20171.26DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana GN=RH1 PE=2 SV=3[more]
RH1_ORYSJ5.9e-17963.15DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica GN=Os02g07... [more]
DDX51_HUMAN1.6e-8337.79ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3[more]
DDX51_MOUSE6.9e-7936.87ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=1 SV=1[more]
DDX51_DANRE5.9e-7836.73ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1[more]
BLAST of CmoCh07G000870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNZ7_CUCSA9.2e-26491.10Uncharacterized protein OS=Cucumis sativus GN=Csa_6G524090 PE=4 SV=1[more]
V4SN06_9ROSI2.5e-22980.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025380mg PE=4 SV=1[more]
W9R784_9ROSA4.1e-22778.79DEAD-box ATP-dependent RNA helicase 1 OS=Morus notabilis GN=L484_011439 PE=4 SV=... [more]
B9H0T9_POPTR7.6e-22679.32DEAD/DEAH box helicase family protein OS=Populus trichocarpa GN=POPTR_0004s16530... [more]
D7TKB7_VITVI3.2e-22477.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g04000 PE=4 SV=... [more]
BLAST of CmoCh07G000870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15850.15.3e-20271.26 RNA helicase 1[more]
AT5G60990.15.7e-3929.54 DEA(D/H)-box RNA helicase family protein[more]
AT4G16630.13.1e-3728.14 DEA(D/H)-box RNA helicase family protein[more]
AT3G22310.16.1e-3328.03 putative mitochondrial RNA helicase 1[more]
AT3G22330.12.3e-3228.03 putative mitochondrial RNA helicase 2[more]
BLAST of CmoCh07G000870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078198|ref|XP_008439599.1|7.8e-26491.30PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Cucumis melo][more]
gi|449433605|ref|XP_004134588.1|1.3e-26391.10PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Cucumis sativus][more]
gi|567868807|ref|XP_006427025.1|3.6e-22980.00hypothetical protein CICLE_v10025380mg [Citrus clementina][more]
gi|568822227|ref|XP_006465537.1|4.0e-22880.00PREDICTED: DEAD-box ATP-dependent RNA helicase 1 isoform X2 [Citrus sinensis][more]
gi|703076935|ref|XP_010090461.1|5.8e-22778.79DEAD-box ATP-dependent RNA helicase 1 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0010501 RNA secondary structure unwinding
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000338 protein deneddylation
biological_process GO:0009640 photomorphogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005730 nucleolus
molecular_function GO:0005524 ATP binding
molecular_function GO:0017151 DEAD/H-box RNA helicase binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004004 ATP-dependent RNA helicase activity
molecular_function GO:0004386 helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G000870.1CmoCh07G000870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 320..431
score: 1.9
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 350..431
score: 1.2
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 307..473
score: 19
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 54..283
score: 7.3
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 48..311
score: 1.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 64..295
score: 21
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 35..298
score: 1.1E-49coord: 299..457
score: 6.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 103..222
score: 4.26E-53coord: 266..453
score: 4.26
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 266..515
score: 2.4E-198coord: 19..149
score: 2.4E-198coord: 171..228
score: 2.4E
NoneNo IPR availablePANTHERPTHR24031:SF68ATP-DEPENDENT RNA HELICASE DDX51coord: 171..228
score: 2.4E-198coord: 19..149
score: 2.4E-198coord: 266..515
score: 2.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G000870Cucsa.047930Cucumber (Gy14) v1cgycmoB0043
CmoCh07G000870CmaCh03G014220Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G000870CmaCh07G000850Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G000870Csa6G524090Cucumber (Chinese Long) v2cmocuB865
CmoCh07G000870MELO3C007111Melon (DHL92) v3.5.1cmomeB782
CmoCh07G000870ClCG01G024830Watermelon (Charleston Gray)cmowcgB755
CmoCh07G000870CSPI06G36510Wild cucumber (PI 183967)cmocpiB873
CmoCh07G000870Lsi01G001250Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G000870Cp4.1LG19g05920Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G000870MELO3C007111.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G000870CsaV3_6G051950Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G000870Bhi03G000101Wax gourdcmowgoB1062
CmoCh07G000870CsGy6G035830Cucumber (Gy14) v2cgybcmoB843
CmoCh07G000870Carg14991Silver-seed gourdcarcmoB0996
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G000870CmoCh03G014180Cucurbita moschata (Rifu)cmocmoB459
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G000870Melon (DHL92) v3.6.1cmomedB875
CmoCh07G000870Silver-seed gourdcarcmoB0410
CmoCh07G000870Silver-seed gourdcarcmoB0572
CmoCh07G000870Watermelon (97103) v2cmowmbB849
CmoCh07G000870Watermelon (97103) v2cmowmbB857
CmoCh07G000870Wax gourdcmowgoB1074
CmoCh07G000870Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G000870Cucurbita moschata (Rifu)cmocmoB350
CmoCh07G000870Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G000870Cucurbita maxima (Rimu)cmacmoB429
CmoCh07G000870Melon (DHL92) v3.5.1cmomeB771
CmoCh07G000870Watermelon (Charleston Gray)cmowcgB760
CmoCh07G000870Watermelon (97103) v1cmowmB809
CmoCh07G000870Watermelon (97103) v1cmowmB816
CmoCh07G000870Cucurbita pepo (Zucchini)cmocpeB798
CmoCh07G000870Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G000870Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G000870Bottle gourd (USVL1VR-Ls)cmolsiB783