CmoCh06G016460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G016460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Far-red impaired responsive (FAR1) family protein
Location	Cmo_Chr06 : 11449035 .. 11452036 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATTAGGCCACTCTCTCCTGGGTTCAGTATCATAGCACAGGTATGTTAGAGAGGTAGCACATGTCTGTTAAGGAGAGGTAGCACATGTCTATTAGGCCACTCGCTCCTGGGTTCAGTATCATAGCACATGTATGTTAGGGAGAGGTTTACACCGTCATTATTTAAATTTTAATGTAAAGTTAAAATAAAAATAGAAAAGGAAGGAGAGAAAAAAGGAAATGGAAGCGTCAGCACACGCTCTGTCCCTTGCCCCAAACTGACACTGAGCTGAACCACTCAGTATCAGTACTCACTAATTCCTTCTTCATTCTCACCCTCTCCCTTCTTCCCGCCGATCGATCAACCGCTTCTGCCGACGACCTTCTTCCCCTTCATTTTCCGGCACCCATGGCCCAAGACCTTCCGGATTCCCCCACCCATCTCTCCATCATGCGCCCTCTGATCTAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGTAAGCGTCTTCATTCATTCCTTTCTTTTCTCTTTTTTTACACAATGCCTTACTCTCTGCCAACATAAATGCCGCACATTTTCGTAACGCTCTTGTAGAAGTGGGTTTTCGAGTCTAAATCGTCATTGGGTCTCGCTTTACTATGCCCAATTTGGCAGAGTGTTATCTTTTTTTGTCTTTTTTGTGCTTTCATTTCATTTCCCTATATATTTTGGCACAATGTGCGTCTGTTGGTGGGTGGGATACGTTGATGCCTTGAAAGTTTTTGAAATTTTTCTTCATTTCTTGCAATTTTTTATGGGTTATTGACATGGAACAACGACGCTCTTGATATTTGGGGATCTTCTGTGTATAATTCCTTCATATAGTTTGGTGTTTACTTTGATTGAAGCTTGGCTATATACTTCCTGTAGGAGAGTAATGGATTGTCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGTATGTTTGAGACTTGTTTTGTTCTTTTTTACATAACTAATATGCATTTCTATAGACAATGTCCATACTTGTCATAGTTCATGGTTTTCTATAGACAATATCAGGCTTGCTTTGTCAGATTGCATCAGAATACTTTTCAATCATCAAACTCTAGTGTCGAGTTTTTGGTTTGATAATTTCTGTTCATGTTGAAAGAAGGGATGTTCACTTTTAAGCCCATGTGTAATAGCCCAAGCCTACCTCTAGTAGATATTGTTCGTTTTGACTCGTTACATAGCACCGTCAACCTCATGGTTTTAAAATACGTATACTAGGGAGAGGTTTCCATACCCTTATGAAGGACGATTCGTTCCCTTCTCCAACTGATATGGGATCTCACAATCCACCCCCCTTCGAGGCCCAGCTTCTTTGTTGGCATTCGTTCCCTTCTTCAACTGATGTGAGATCTCACAATCCACCCTCCTTCGGAGTCTAGCATCCTCGCTGGCACACCACCTGATGTCTAGTTTTTATACCATTTGTAACAACCCAAACCCACCGCTAGCAGATATTATTCGCTTTGGCTCCTTATGTATCGTCGTCAGCCTGACGATTTTAAAACGTGTCTTCTTGGGAGAGGTTTCCACTCCCTTATAAAAAATGATGTGTTCCCCTATCTAACCGATATGGGATCACACAATGTATGGTACATTCCTTTTAGTTCTTACTCATTTTCTCCATCATGCTTGATGGGGTACCATGAATTGGATTTTCTTTCTGCAATTTACTTGTTGTCAAGGCTATTACGACTGCACGACGTAGAACGAACAATTACCATTCTAGTTTGTGTTCTTTTCGCCTCAACTGGTGAATTTATGCAATCATCAACTTTTTGGTGGGTGTGCTATAATATAGCCATGGTCGTCCGTGGGCAATTGTATTCGGAAACATCAAGTTTAGTCAAAAGAAATAGATAGATAGCATTCCATCTTCAGTTTAAATGGTTTTCATTTTCTTCATATCTGGAATTCTTATTCGAAACCTATCGAATTTGTTGTGTCTACAACCACATTCTTGATGCACGTAGCTTTGATCATTTTTCGGATACACATGAATTCATTCGAGTTGATAAGTTGGCATCGGCCGTGCGTTCGTTTTGTTTTGCAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAA

mRNA sequence

ATGTCTATTAGGCCACTCTCTCCTGGGTTCAGTATCATAGCACAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGAGAGTAATGGATTGTCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAGATTGTCACAACTGCACTAACTTATTTTAGATGGGATAATGACTTTGAAGCTTTCATTTTTTTTTGTTCAAGGAGCCAAATGTTAACTCACATATTGTAGATGGATATTGACTTCTTTGAGGAGAATTTCAGTGTATAAAGTATTTATCCTTGTTGGAATGACACTTGGCATTTGAAAA

Coding sequence (CDS)

ATGTCTATTAGGCCACTCTCTCCTGGGTTCAGTATCATAGCACAGGGTTTCCTCCCTTTTCCACTCTTCTCCGTTTCCTGGAGAGTAATGGATTGTCAATCCAATCACACATTTGATTCAGATGAAAGTGACATTGATATTCAGGCCGAAATCTATGAGAAGGGTGGGAGTATAGATGATATTCATAAGGACTTGGACTTTTGTCTGCGTGAAGATGATAAGGTAGCAGAGCAATCTGTTGTGGATTTACCTATGGATGGAGCAGAACCATACATAGGCATGGAGTTTGGTTCTAGAGATGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTCGGATTCACCGTTCGAATACATCATAATCGACGTTCCCGTGTCAACAATCAGGTGATTGGTCAGGATTTTGTCTGTTCAAAAGAAGGATTCCGAGCTAAGAAGTATGTATCCAGAAAAGATAGGATACTTCCAGCCCCACCTATTACACGAGAGGGATGTCAAGCAATGATAAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACAAAATTTGTTAAAGATCATAATCATCTCTTGCTGAGTCCTAGTAAAGTTCCATGGCGCGGATCTGGAAAAAACTTGCTCACTGAGGATGAGAAGGATAAGAGGATTCGAGAATTGTCGCTCGAGTTGTACAATGAGAAGCAGAAATGTAAGAGAAAATGTGCAGCATATGAAGAACAATTGAAAGCAGTCTTGAAGGAGTTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTGAAGAGCATTAGAGAAGTTGAAGATGAAGAACACTCAGGAGGTTTGAATCAAGGTTGGGTTTAG

Homology

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BLAST of CmoCh06G016460 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.4e-25
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 1


Query: 89  EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 148
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 149 VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 200
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

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BLAST of CmoCh06G016460 vs. Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.4e-18
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 1


Query: 87  GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 146
           G EPY+G+EF + +EAREFY  Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 40  GVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 99

Query: 147 KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLL 194
                          +R GC A IR+  RD GKW + +  K+HNH L
Sbjct: 100 ---------------SRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

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BLAST of CmoCh06G016460 vs. Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 1


Query: 87  GAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 146
           G EPY+G+EF + +EAR++Y +Y  R GF VR     RSR +  V  + FVCSKEGF+  
Sbjct: 25  GLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLN 84

Query: 147 KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH 192
                          +R GC A IR+  RD GKW + +  K+HNH
Sbjct: 85  ---------------SRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

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BLAST of CmoCh06G016460 vs. Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 3.9e-15
Identity = 44/108 (40.74%), Postives = 60/108 (55.56%), Query Frame = 1


Query: 88  AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 147
           AEP +GMEF S  EA+ FY  Y R++GFT ++      R +  V  ++FVCS    R+K+
Sbjct: 47  AEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL----LPRTDGSVSVREFVCSSSSKRSKR 106

Query: 148 YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLS 196
            +S             E C AM+R+ L+   KW VTKFVK+H H L S
Sbjct: 107 RLS-------------ESCDAMVRIELQGHEKWVVTKFVKEHTHGLAS 137

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BLAST of CmoCh06G016460 vs. Swiss-Prot
Match: FRS6_ARATH (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-14
Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 1


Query: 64  DLDFCLREDDKVAEQSV----------VDLPMDGAEPYIGMEFGSRDEAREFYVNYGRRV 123
           D+ FC  E+ K  E+++          VD   +   P +GMEF S D+A  +Y  Y   V
Sbjct: 49  DVGFCQNEERKSEEETMGGFDEQSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEV 108

Query: 124 GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDRILPAPPITREGCQAMIRLA 183
           GF VR+ ++   R + +  G    CS +GF+    V+R  +       TR GC AMIR+ 
Sbjct: 109 GFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDVNRVRK------ETRTGCPAMIRMR 168

Query: 184 LRDGGKWAVTKFVKDHNHLL 194
             D  +W V +   DHNHLL
Sbjct: 169 QVDSKRWRVVEVTLDHNHLL 182

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BLAST of CmoCh06G016460 vs. TrEMBL
Match: A0A0A0KW49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015740 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.3e-130
Identity = 232/256 (90.62%), Postives = 242/256 (94.53%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMDGAE 89
           MDCQS+HTFDSDESDIDIQ EIYEKGGSIDDI  DLDFCLR+DDKVAEQSVVDLPMDG E
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60

Query: 90  PYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 149
           PYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 150 SRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLL 209
            RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GSGKN L
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKN-L 180

Query: 210 TEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIR 269
           +EDEKDKRIRELSLELYNE+QK KRKCAAYEEQLK + KELEMHTECISNKVAEVVKSIR
Sbjct: 181 SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIR 240

Query: 270 EVEDEEHSGGLNQGWV 286
           EVE+EE S G N+ W+
Sbjct: 241 EVEEEEESKGSNERWI 255

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BLAST of CmoCh06G016460 vs. TrEMBL
Match: A0A067L5V8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20856 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-102
Identity = 186/247 (75.30%), Postives = 214/247 (86.64%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSV-VDLPMDGA 89
           MD QS H FDSDESD++IQAE YE G   DD+  +LDFC+ E+D V+EQ V + +  +G 
Sbjct: 1   MDDQSGHGFDSDESDLEIQAESYEYGRIEDDLPNNLDFCVSEEDNVSEQYVGLTINAEGL 60

Query: 90  EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 149
           EPYIGMEF +RDEAREFY++YGR  GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY
Sbjct: 61  EPYIGMEFNTRDEAREFYISYGRCAGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120

Query: 150 VSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNL 209
           V RKDR+LP PPITREGCQAMIRLALRDG KW VTKFVK+H H L+SPSKVPWRGSGK+L
Sbjct: 121 VYRKDRVLPPPPITREGCQAMIRLALRDGVKWVVTKFVKEHTHKLMSPSKVPWRGSGKHL 180

Query: 210 LTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSI 269
           ++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +LK+LE HTE IS KV +VV+SI
Sbjct: 181 ISEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHISKKVNDVVQSI 240

Query: 270 REVEDEE 276
           RE+E+E+
Sbjct: 241 REIEEEQ 247

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BLAST of CmoCh06G016460 vs. TrEMBL
Match: A0A0S3SG33_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G040200 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 181/248 (72.98%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMD--G 89
           MD +S   FDSD+SD+++QAEI EK   ID+  KDL+ C  ED+K  E    ++P D   
Sbjct: 1   MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEA 60

Query: 90  AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 149
            EP+IGMEF SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 150 YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKN 209
           YV RKDR+LP PP TREGCQAMIRLALRDGGKW VTKFVK+HNH L+SPSKVPWRGSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 210 LLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKS 269
           L++EDEKD+RIRELSLELYNE+QKCKR+CAAYEEQL  +L +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRS 240

Query: 270 IREVEDEE 276
           IRE+E+E+
Sbjct: 241 IREIEEEK 248

[Close]

BLAST of CmoCh06G016460 vs. TrEMBL
Match: A0A0L9UP09_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g205300 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 181/248 (72.98%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMD--G 89
           MD +S   FDSD+SD+++QAEI EK   ID+  KDL+ C  ED+K  E    ++P D   
Sbjct: 1   MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEA 60

Query: 90  AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 149
            EP+IGMEF SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 150 YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKN 209
           YV RKDR+LP PP TREGCQAMIRLALRDGGKW VTKFVK+HNH L+SPSKVPWRGSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 210 LLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKS 269
           L++EDEKD+RIRELSLELYNE+QKCKR+CAAYEEQL  +L +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRS 240

Query: 270 IREVEDEE 276
           IRE+E+E+
Sbjct: 241 IREIEEEK 248

[Close]

BLAST of CmoCh06G016460 vs. TrEMBL
Match: V7BZ97_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G152800g PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 3.6e-100
Identity = 181/248 (72.98%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMD--G 89
           MD +S   FDSD+S++D+QAEI EK G ID+  K+L+ C  ED+K  E    ++  D   
Sbjct: 1   MDHESGQGFDSDDSELDMQAEISEKHGKIDEFSKNLELCGSEDEKFVELPATEISTDIEA 60

Query: 90  AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 149
            EP+IGMEF SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 150 YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKN 209
           YV RKDR+LP PP TREGCQAMIRLALRDGGKW VTKFVK+HNH L+SPSKVPWRGSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 210 LLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKS 269
           L++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +L +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAVVRS 240

Query: 270 IREVEDEE 276
           IRE+E+E+
Sbjct: 241 IREIEEEK 248

[Close]

BLAST of CmoCh06G016460 vs. TAIR10
Match: AT2G43280.1 (AT2G43280.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 1


Query: 89  EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEG----FR 148
           EP  G+ F S D A+ FY +Y RR+GF +R+   RRS  + +++ + F C+KEG     R
Sbjct: 21  EPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGHCVSIR 80

Query: 149 AKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNH-LLLSPSKVPWRG 208
            K    RK R     P TREGC+AMI +     GKW +TKFVK+HNH L++SP +     
Sbjct: 81  GKFGSVRKPR-----PSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARH-- 140

Query: 209 SGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAE 268
                 T DEKDKRI+EL++EL N+    KR CAAY+EQL A  K +E H+  I+ KV  
Sbjct: 141 ------TLDEKDKRIQELTIELRNK----KRLCAAYKEQLDAFAKIVEEHSNQIAKKVEN 197

Query: 269 VVKSIREVEDEEHS 278
           VV +++E E  EH+
Sbjct: 201 VVNNLKEFEHLEHA 197

[Close]

BLAST of CmoCh06G016460 vs. TAIR10
Match: AT3G07500.1 (AT3G07500.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.4e-33
Identity = 83/198 (41.92%), Postives = 118/198 (59.60%), Query Frame = 1


Query: 78  QSVVDLPMDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFV 137
           ++V D      EP+IGMEF S + A+ FY NY   +GF +R+   RRS  +  V+ +  V
Sbjct: 21  KTVTDEASPMVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLV 80

Query: 138 CSKEGF---RAKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLL 197
           C+KEGF   R ++  SRK R      ITREGC+A+I +     G W VTKF K+HNH LL
Sbjct: 81  CNKEGFRRSRPRRSESRKPR-----AITREGCKALIVVKREKSGTWLVTKFEKEHNHPLL 140

Query: 198 SPSKVPWRGSGKNLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHT 257
            P     R + +   T DEKD +IRELS EL  E    +R+C A ++QL  VLKE+E H+
Sbjct: 141 -PLSPNVRRNFQLPQTPDEKDAKIRELSAELSRE----RRRCTALQQQLDMVLKEMEEHS 200

Query: 258 ECISNKVAEVVKSIREVE 273
             ++  +  V++S+R++E
Sbjct: 201 NHLTININSVIQSVRDIE 208

[Close]

BLAST of CmoCh06G016460 vs. TAIR10
Match: AT3G59470.1 (AT3G59470.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 128.6 bits (322), Expect = 6.0e-30
Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 1


Query: 59  DDIHKDLDFCLREDDKVAEQSVVDLPM------DGAEPYIGMEFGSRDEAREFYVNYGRR 118
           DD H +L     E D+  +   + L +       G EPY+G EF S   A  FY  Y  +
Sbjct: 33  DDNHNELGENSGEQDEKVDLDSIPLAVADMTEAQGDEPYVGQEFESEAAAHGFYNAYATK 92

Query: 119 VGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDRILPAPPITREGCQAMIRL 178
           VGF +R+    RSR +   IG+  VC+KEG+R     S++D+++     TR GC+AMI +
Sbjct: 93  VGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLP---SKRDKVIRQRAETRVGCKAMILI 152

Query: 179 ALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLLTEDEKDKRIRELSLELYNEKQKC 238
              + GKW +TKFVK+HNH L+ P +V  RG   +    +E DK I+EL  +L  E    
Sbjct: 153 RKENSGKWVITKFVKEHNHSLM-PGRVR-RGCIYDQY-PNEHDK-IQELMQQLAAE---- 212

Query: 239 KRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIREVEDEEH 277
           K++ A Y+  L+ + +++E H E +S ++  +V ++R +E  +H
Sbjct: 213 KKRAATYKRHLEMLFEQIEQHNESLSKRIQHIVDNVRNLEQRDH 245

[Close]

BLAST of CmoCh06G016460 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-26
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 1


Query: 89  EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 148
           EPY G+EF S + A+ FY +Y RR+GF+ R+  +RRSR +  +I + FVC+KEGFR    
Sbjct: 72  EPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNE 131

Query: 149 VSRKDRILPAP-PITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKV 200
              KDR +  P  ITR GC+A + + ++D GKW V+ FVKDHNH L+ P +V
Sbjct: 132 KRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQV 183

[Close]

BLAST of CmoCh06G016460 vs. TAIR10
Match: AT4G12850.1 (AT4G12850.1 Far-red impaired responsive (FAR1) family protein)

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-26
Identity = 66/192 (34.38%), Postives = 115/192 (59.90%), Query Frame = 1


Query: 82  DLPMDGAEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKE 141
           DL +D  EPY+G++F S +EA++FYV Y +R+GF VR+   RRS ++ + + +   C+K+
Sbjct: 4   DLKLD--EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQ 63

Query: 142 GFRAKKYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPW 201
           GF          R   +   +REGC+A I + +   GKW VT+F+K+HNH L       +
Sbjct: 64  GFG-----PNNQRSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL------QF 123

Query: 202 RGSGKNLLTEDEKDKRIRELSLELYNEKQKCK-RKCAAYEEQLKAVLKELEMHTECISNK 261
            GS       D K+++I+EL+ E+     +C+ R C  Y ++L + +  +E +TE +S K
Sbjct: 124 IGSSSYDSFAD-KERKIKELTEEI-----ECQDRLCDVYRDRLVSFIDNVEHYTEELSLK 176

Query: 262 VAEVVKSIREVE 273
           V ++V++++++E
Sbjct: 184 VRDIVENVKKLE 176

[Close]

BLAST of CmoCh06G016460 vs. NCBI nr
Match: gi|659108020|ref|XP_008453975.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 1.6e-130
Identity = 232/256 (90.62%), Postives = 243/256 (94.92%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMDGAE 89
           MDCQS+HTFDSDESDIDIQ EIYEKGGSIDDI  DLDFCLR+DDKVAEQSVVD PMDG E
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDFPMDGVE 60

Query: 90  PYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 149
           PYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 150 SRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLL 209
            RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GSGKN L
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKN-L 180

Query: 210 TEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIR 269
           +EDEKDKRIR+LSLELYNE+QK KRKCAAYEEQLK +LKELEMHTECISNKVAEVVKSIR
Sbjct: 181 SEDEKDKRIRDLSLELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEVVKSIR 240

Query: 270 EVEDEEHSGGLNQGWV 286
           EVE+EE S GLN+ W+
Sbjct: 241 EVEEEEESKGLNERWI 255

[Close]

BLAST of CmoCh06G016460 vs. NCBI nr
Match: gi|449468782|ref|XP_004152100.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus])

HSP 1 Score: 472.2 bits (1214), Expect = 6.2e-130
Identity = 232/256 (90.62%), Postives = 242/256 (94.53%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMDGAE 89
           MDCQS+HTFDSDESDIDIQ EIYEKGGSIDDI  DLDFCLR+DDKVAEQSVVDLPMDG E
Sbjct: 1   MDCQSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVE 60

Query: 90  PYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 149
           PYIGMEF SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV
Sbjct: 61  PYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYV 120

Query: 150 SRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLL 209
            RKDRILPAPPITREGCQAM+RLALRDGGKWAVTKFVKDHNHLLLSPSKVPW+GSGKN L
Sbjct: 121 CRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKN-L 180

Query: 210 TEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSIR 269
           +EDEKDKRIRELSLELYNE+QK KRKCAAYEEQLK + KELEMHTECISNKVAEVVKSIR
Sbjct: 181 SEDEKDKRIRELSLELYNERQKYKRKCAAYEEQLKTIWKELEMHTECISNKVAEVVKSIR 240

Query: 270 EVEDEEHSGGLNQGWV 286
           EVE+EE S G N+ W+
Sbjct: 241 EVEEEEESKGSNERWI 255

[Close]

BLAST of CmoCh06G016460 vs. NCBI nr
Match: gi|1009139170|ref|XP_015886981.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ziziphus jujuba])

HSP 1 Score: 383.3 bits (983), Expect = 3.8e-103
Identity = 192/258 (74.42%), Postives = 220/258 (85.27%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDD-IHKDLDFCLREDDKVAEQSVVDLPMDGA 89
           MD QS H FDSDESD+DIQAE ++K   IDD + ++L  C+ + +K AEQS+ +L M+  
Sbjct: 1   MDNQSGHEFDSDESDLDIQAETFKKHEEIDDPLSQNLGLCIGDGEKAAEQSIGNLAMNAE 60

Query: 90  --EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 149
             EPYIGMEF SRDEAREFYV YGRR GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK
Sbjct: 61  TLEPYIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAK 120

Query: 150 KYVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGK 209
           KYV RKDR+LP PPITREGCQAMIRLALRDG KW VTKFVK+HNH L+SPSKVPWRGSGK
Sbjct: 121 KYVYRKDRVLPPPPITREGCQAMIRLALRDGMKWVVTKFVKEHNHKLMSPSKVPWRGSGK 180

Query: 210 NLLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVK 269
           +L++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL A+LK+LE HTE ISNKVA++V+
Sbjct: 181 HLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNAILKDLEKHTEHISNKVADIVQ 240

Query: 270 SIREVEDEEHSGGLNQGW 285
           SI+ +E EE S   + GW
Sbjct: 241 SIKTIE-EEQSEDSDSGW 257

[Close]

BLAST of CmoCh06G016460 vs. NCBI nr
Match: gi|802554950|ref|XP_012065173.1| (PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas])

HSP 1 Score: 379.8 bits (974), Expect = 4.2e-102
Identity = 186/247 (75.30%), Postives = 214/247 (86.64%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSV-VDLPMDGA 89
           MD QS H FDSDESD++IQAE YE G   DD+  +LDFC+ E+D V+EQ V + +  +G 
Sbjct: 1   MDDQSGHGFDSDESDLEIQAESYEYGRIEDDLPNNLDFCVSEEDNVSEQYVGLTINAEGL 60

Query: 90  EPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 149
           EPYIGMEF +RDEAREFY++YGR  GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY
Sbjct: 61  EPYIGMEFNTRDEAREFYISYGRCAGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 120

Query: 150 VSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNL 209
           V RKDR+LP PPITREGCQAMIRLALRDG KW VTKFVK+H H L+SPSKVPWRGSGK+L
Sbjct: 121 VYRKDRVLPPPPITREGCQAMIRLALRDGVKWVVTKFVKEHTHKLMSPSKVPWRGSGKHL 180

Query: 210 LTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKSI 269
           ++EDEKDKRIRELSLELYNE+QKCKR+CAAYEEQL  +LK+LE HTE IS KV +VV+SI
Sbjct: 181 ISEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNLILKDLEKHTEHISKKVNDVVQSI 240

Query: 270 REVEDEE 276
           RE+E+E+
Sbjct: 241 REIEEEQ 247

[Close]

BLAST of CmoCh06G016460 vs. NCBI nr
Match: gi|920701223|gb|KOM44448.1| (hypothetical protein LR48_Vigan05g205300 [Vigna angularis])

HSP 1 Score: 374.0 bits (959), Expect = 2.3e-100
Identity = 181/248 (72.98%), Postives = 210/248 (84.68%), Query Frame = 1


Query: 30  MDCQSNHTFDSDESDIDIQAEIYEKGGSIDDIHKDLDFCLREDDKVAEQSVVDLPMD--G 89
           MD +S   FDSD+SD+++QAEI EK   ID+  KDL+ C  ED+K  E    ++P D   
Sbjct: 1   MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEA 60

Query: 90  AEPYIGMEFGSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 149
            EP+IGMEF SR+EAREFY+ YGRR+GFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 150 YVSRKDRILPAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKN 209
           YV RKDR+LP PP TREGCQAMIRLALRDGGKW VTKFVK+HNH L+SPSKVPWRGSGK+
Sbjct: 121 YVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKH 180

Query: 210 LLTEDEKDKRIRELSLELYNEKQKCKRKCAAYEEQLKAVLKELEMHTECISNKVAEVVKS 269
           L++EDEKD+RIRELSLELYNE+QKCKR+CAAYEEQL  +L +LE HTE IS KVA VV+S
Sbjct: 181 LVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRS 240

Query: 270 IREVEDEE 276
           IRE+E+E+
Sbjct: 241 IREIEEEK 248

The following BLAST results are available for this feature:

BLAST of CmoCh06G016460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FRS5_ARATH	5.4e-25	48.21	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	[more]
FRS12_ARATH	8.4e-18	43.93	Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1	[more]
FRS7_ARATH	3.2e-17	41.90	Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1	[more]
FRS3_ARATH	3.9e-15	40.74	Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2	[more]
FRS6_ARATH	4.3e-14	34.29	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6 PE=2 SV=1	[more]

BLAST of CmoCh06G016460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW49_CUCSA	4.3e-130	90.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015740 PE=4 SV=1	[more]
A0A067L5V8_JATCU	2.9e-102	75.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20856 PE=4 SV=1	[more]
A0A0S3SG33_PHAAN	1.6e-100	72.98	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G040200 PE=...	[more]
A0A0L9UP09_PHAAN	1.6e-100	72.98	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g205300 PE=4 SV=1	[more]
V7BZ97_PHAVU	3.6e-100	72.98	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G152800g PE=4 SV=1	[more]

BLAST of CmoCh06G016460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43280.1	2.0e-33	44.33	Far-red impaired responsive (FAR1) family protein	[more]
AT3G07500.1	3.4e-33	41.92	Far-red impaired responsive (FAR1) family protein	[more]
AT3G59470.1	6.0e-30	35.27	Far-red impaired responsive (FAR1) family protein	[more]
AT4G38180.1	3.1e-26	48.21	FAR1-related sequence 5	[more]
AT4G12850.1	4.0e-26	34.38	Far-red impaired responsive (FAR1) family protein	[more]

BLAST of CmoCh06G016460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108020\|ref\|XP_008453975.1\|	1.6e-130	90.63	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis melo]	[more]
gi\|449468782\|ref\|XP_004152100.1\|	6.2e-130	90.63	PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Cucumis sativus]	[more]
gi\|1009139170\|ref\|XP_015886981.1\|	3.8e-103	74.42	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Ziziphus jujuba]	[more]
gi\|802554950\|ref\|XP_012065173.1\|	4.2e-102	75.30	PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas]	[more]
gi\|920701223\|gb\|KOM44448.1\|	2.3e-100	72.98	hypothetical protein LR48_Vigan05g205300 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004330	FAR1_DNA_bnd_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G016460.1	CmoCh06G016460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 104..194 score: 2.4
None	No IPR available	unknown	Coil	Coil	coord: 229..249 scor
None	No IPR available	PANTHER	PTHR31669:SF31	SUBFAMILY NOT NAMED	coord: 28..277 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G016460	Cucsa.094760	Cucumber (Gy14) v1	cgycmoB0199
CmoCh06G016460	CmaCh06G016440	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G016460	Cla010840	Watermelon (97103) v1	cmowmB788
CmoCh06G016460	Csa4G015740	Cucumber (Chinese Long) v2	cmocuB823
CmoCh06G016460	ClCG07G015710	Watermelon (Charleston Gray)	cmowcgB749
CmoCh06G016460	CSPI04G03390	Wild cucumber (PI 183967)	cmocpiB832
CmoCh06G016460	Cp4.1LG08g05830	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G016460	CsaV3_4G003380	Cucumber (Chinese Long) v3	cmocucB0970
CmoCh06G016460	Cla97C07G142740	Watermelon (97103) v2	cmowmbB840
CmoCh06G016460	Bhi01G002095	Wax gourd	cmowgoB1009
CmoCh06G016460	Carg15479	Silver-seed gourd	carcmoB0947

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G016460	Wild cucumber (PI 183967)	cmocpiB833
CmoCh06G016460	Melon (DHL92) v3.5.1	cmomeB761
CmoCh06G016460	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G016460	Bottle gourd (USVL1VR-Ls)	cmolsiB768
CmoCh06G016460	Cucumber (Gy14) v2	cgybcmoB535
CmoCh06G016460	Melon (DHL92) v3.6.1	cmomedB865
CmoCh06G016460	Silver-seed gourd	carcmoB0274
CmoCh06G016460	Cucumber (Chinese Long) v3	cmocucB0971
CmoCh06G016460	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G016460	Cucurbita maxima (Rimu)	cmacmoB271